BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G14660.1
Length=2471
Score E
Sequences producing significant alignments: (Bits) Value
Ahg471645 jgi|Araly1|471645|fgenesh2_kg.1__1599__AT1G14660.1 3688 0.0
Ahg484121 jgi|Araly1|484121|fgenesh2_kg.5__113__AT2G01980.1 1622 0.0
Ahg473579 jgi|Araly1|473579|fgenesh2_kg.1__3533__AT1G14660.1 989 0.0
> Ahg471645 jgi|Araly1|471645|fgenesh2_kg.1__1599__AT1G14660.1
Length=2318
Score = 3688 bits (1997), Expect = 0.0
Identities = 2217/2324 (95%), Gaps = 12/2324 (1%)
Strand=Plus/Plus
Query 1 CTACCGGAGATGACGAGTATAATCGGCGCGGCGTTGCCGTACAAATCACCGGAGAAAGCA 60
||| |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||
Sbjct 1 CTAACGGAGATGACGAGTATAATCGGCGCGACGTTACCGTACAAGTCACCGGAGAAAGCA 60
Query 61 ATTGCATCTTCTTCGTATTCAGCTGAGAACGATTCGAGTCCTGTTGATGCTGTTATTTTC 120
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 61 ATTGCATCTTCTTCGTATTCAGCCGAGAACGATTCGAGTCCTGTTGATGCCGTTATTTTC 120
Query 121 GCGGGAACTTCGCTGGTTCTCGGCACCGCTTGTAGATATTTGTTTAACGGCACTAGAGTT 180
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 121 GCGGGAACTTCGCTGGTTCTCGGCACCGCCTGTAGACATTTGTTTAACGGCACTAGAGTT 180
Query 181 CCGTACACCGTCGTTCTTCTCGTCATCGGCATTTTTCTCGGATCCCTAGAATATGGAACT 240
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 181 CCGTACACCGTCGTTCTTCTCGTCATCGGCATTGTTCTCGGATCTCTAGAATATGGAACT 240
Query 241 AAGCATAACCTTGGGAAGCTCGGCCATGGAATTCGTATCTGGAATGGTATCAACCCTGAC 300
|| ||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||||
Sbjct 241 AATCATAATCTTGGGAAGCTCGGCCATGGAATCCGTATCTGGAATGATATAAACCCTGAC 300
Query 301 CTACTTTTGGCTGTTTTTCTCCCTGTTCTTCTTTTCGAGAGCTCATTCTCCATGGATGTG 360
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 301 CTACTTTTGGCTGTTTTTCTCCCTGCTCTTCTTTTCGAGAGCTCGTTCTCCATGGATGTG 360
Query 361 CACCAGATCAAGAGATGTATGG-GACAAATGGTTCTGCTTGCTGGACCTGGAGTTCTGAT 419
|||||||||||||| ||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct 361 CACCAGATCAAGAGGTGTATGGTG-CAAATGGTTCTGCTTGCTGGCCCTGGAGTTCTGAT 419
Query 420 TTCCACCTTTTGTCTCGGAGCTCTTATAAAGCTTACTTTTCCATATAACTGGGACTGGAA 479
||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 420 TTCTACCTTTTGTCTTGGAGCTCTTATAAAGCTCACTTTTCCATATAACTGGGACTGGAA 479
Query 480 AACATCATTGTTGCTTGGAGGACTTTTAGGAGCTACCGACCCCGTGGCTGTTGTTGCTTT 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 480 AACATCATTGTTGCTTGGAGGACTTTTAGGAGCTACCGACCCCGTGGCTGTTGTTGCTCT 539
Query 540 GCTAAAGGAGCTTGGTGCTAGTAAGAAGATGACCACGTTAATTGATGGGGAATCTCTCAT 599
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct 540 GCTAAAGGAGCTTGGTGCTAGTAAGAAGATGACCACTTTAATTGACGGGGAATCTCTGAT 599
Query 600 GAACGATGGGGTATCGGTTGTGGTTTTTCAATTATTCTTCAAGATGGTGATGGGGCATAA 659
||| || ||||||||||| |||||||| || |||||||||||||||||||||||||||||
Sbjct 600 GAATGACGGGGTATCGGTAGTGGTTTTCCAGTTATTCTTCAAGATGGTGATGGGGCATAA 659
Query 660 CTCTGATTGGGGTTCCATAATCAAATTTCTTGTCCAAAACTCATTCGGAGCTGTAGGCAT 719
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 660 CTCTGATTGGGGTTCCATAATCAAATTTCTTGTCCAGAACTCATTTGGAGCTGTAGGCAT 719
Query 720 TGGTCTAGCTTTTGGAATTGCATCAGTTTTTTGGCTTAAATTCATATTCAATGACACGGT 779
|||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 720 TGGTATAGCTTTTGGAATTGCATCAGTTTTTTGGCTTAAATTTATATACAATGACACGGT 779
Query 780 GGCT-CAGATCACTGTAACACTTTCAGCGAGCTATTTCGCCTATTACACTGCTCAAGAGT 838
|| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 780 GG-TGCAGATCACTGTAACACTTTCAGCGAGCTATTTCGCTTATTACACTGCGCAAGAGT 838
Query 839 GGGCTGGGGTTTCTGGAATTTTGACTGTCATGATTTTGGGGATGTTTTTCGCTGCATTTG 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 GGGCTGGGGTTTCTGGAATTTTGACTGTCATGATTTTGGGGATGTTTTTCGCTGCATTTG 898
Query 899 CAAGGACAGCTTTTAAGGGGGACAGTCACCAGAGTCTGCATCACTTCTGGGAAATGGCCG 958
|||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 899 CAAGGACATCATTTAAAGGTGACAGTCACCAGAGTCTGCATCACTTCTGGGAAATGGCCG 958
Query 959 CTTACATTGCAAATACACTAGTTTTTATGCTCAGTGGAGTTATTATCGCTGAAAGCGTTC 1018
|||| |||||||||||| |||||||||| ||||||||||||||||| |||||| || |||
Sbjct 959 CTTATATTGCAAATACATTAGTTTTTATACTCAGTGGAGTTATTATTGCTGAAGGCATTC 1018
Query 1019 TTAGCGGTCAGACAATATCTTACAAAGGAAACTCGTGGAGCTTCCTTTTCCTCTTATACT 1078
||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1019 TTAGCGGTCGGGCAATATCTTACAAAGGAAACTCGTGGGGCTTCCTTTTCCTCTTATACT 1078
Query 1079 TGTATGTCCAACTTTCCCGCTGTGTTGTTGTTGGAGTTTTGTACCCATTGCTATGCCGTT 1138
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 1079 TGTATGTCCAACTTTCCCGCTGTGTTGTGGTTGGAGTTCTGTACCCATTGCTATGCCGTT 1138
Query 1139 CTGGCTATGGGTTGGATTGGAAGGAATCCATCATACTCACGTGGTCTGGATTAAGGGGTG 1198
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 TTGGCTATGGCTTGGATTGGAAGGAATCCATCATACTCACGTGGTCTGGATTAAGGGGTG 1198
Query 1199 CTGTTTCGCTGTCGCTCGCTCTATCTGTAAAACAATCAAGTGGAAATTCATATCTCAGTT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 CTGTTTCGCTGTCGCTCGCTCTATCTGTAAAACAATCAAGTGGAAATTCATATCTCAGTT 1258
Query 1259 CAGATACGGGAACAAGGTTTCTATTCCTCACAGGTGGGATTGTTTTCCTAACTTTGGTTG 1318
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1259 CGGATACGGGAACAAGGTTTCTATTCCTCACAGGTGGAATTGTTTTCCTAACTTTGGTTG 1318
Query 1319 TTAATGGATCCACTACCCAATTGCTCTTGCACCTTCTTCGCATGGACACTTTAACGGCCA 1378
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1319 TTAATGGATCCACTACCCAATTCCTCTTGCACCTTCTTCGCATGGACACTTTAACGGCCA 1378
Query 1379 CTAAGAAACGAATATTGGAGTATACAAAGTTTGAAATGATGAAGACTGCTTTAAAAGCTT 1438
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 1379 CTAAGAAACGAATATTGGAGTATACAAAGATTGAAATGATGAAGACCGCTTTAAAAGCTT 1438
Query 1439 TTGAAAATCTTGGAGATGACGAGGAGCTTGGATCTGCTGACTGGCCTACAGTTATAAGAC 1498
|||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1439 TTGAAAATCTAGGAGATGACAAGGAGCTTGGATCTACTGACTGGCCTACAGTTATAAGAC 1498
Query 1499 ATATTTCAAGCTTGAAAGATTTAGAAGGGAGACAAGTTAATCCTCACGATGGGTACGAAG 1558
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1499 ATATTTCAAGCTTGAAAGATTTAGAAGGGAGACAAATTAATCCTCACAATGGGTACGAAG 1558
Query 1559 CTGGAAGTCTTGACCCTACGAATATAATGGACATACGTATACGCTTCTTAAATGGTGTCC 1618
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct 1559 CTGGAAGTCTTGACCCTACTAATATAATGGACATACGTATACGCCTCTTAAATGGTGTCC 1618
Query 1619 AGGCAGCTTACTGGGAGATGCTTGATGATGGGAGAATAACACAATGTACTGCTAATGTTT 1678
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 1619 AGGCAGCTTACTGGGAGATGCTTGATGATAGGAGAATAACACAATGTACTGCCAATGTTT 1678
Query 1679 TGATGCAATCAGTAGATGAGGCACTTGACCTTGTTTCTACCAGTTCTTTAAGCGACTGGA 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 TGATGCAATCAGTAGATGAGGCACTTGACCTTGTTTCTACCAGTTCTTTAAGCGACTGGA 1738
Query 1739 GGGGTTTAGAACCGCGTGTTCATTTCCCAAATTACTACAAGTTTCTTCAGTCAAAAATTA 1798
||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1739 GGGGTTTAGAACCACTTGTTCATTTCCCAAATTACTACAAGTTTCTTCAATCAAAAATTA 1798
Query 1799 TCCCCCACAAGTTAGTCACGCATTTGATCGTTGAAAGACTGGAATCTGCTTGTTACATTT 1858
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1799 TCCCCCGCAAGTTGGTCACGCATTTGATCGTTGAAAGACTGGAATCTGCTTGTTGCATTT 1858
Query 1859 C-TTCTGCATTTCTCCGTGCCCATAGGATTGCGCGACAGCAATTGCAT-ATCTTTCTAGG 1916
| || ||||||||| |||||||||||||||||||||||||||||||| | || |||||
Sbjct 1859 CCTT-TGCATTTCTATGTGCCCATAGGATTGCGCGACAGCAATTGCATGAA-TTCCTAGG 1916
Query 1917 TAACAGTAACATTGCCTCTACTGTAATCAATGAAAGTGAGGTGGAAGGAGAAGAAGCAAA 1976
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1917 TAACAGTAACATTGCTTCTACTGTAATCAATGAAAGTGAGGTGGAAGGAGATGAAGCAAA 1976
Query 1977 ACAGTTCTTGGAAGATGTCCGTGATTCATTTCCTCAGGTTTTGAGTGTTTTGAAAACAAG 2036
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1977 ACAGTTCTTGGAAGATGTCCGTAATTCATTTCCCCAGGTTTTGAGTGTTTTGAAAACAAG 2036
Query 2037 ACAAGTAACACATTATGTGCTGAATCATCTAAATGGTTATATTAAAAACCTTGAGAAGGT 2096
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2037 ACAAGTAACACAGTATGTGCTGAATCATCTAAATGGTTATATCAAAAACCTTGAGAAGGT 2096
Query 2097 TGG-CTTGTTAGA-GGGAAAAGAAGTTTCTCATCTTCATGATGTTGTTCAGTCTGACTTG 2154
||| || |||||| |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 2097 TGGGCT-GTTAGAAGGGAAA-GAAGTTTCTCATCTTCAAGATGTTGTTCAGTCTGACTTG 2154
Query 2155 AAGAAGCTCCTGAGACATCCTCCTTCACTAAAACTTCCAAATGTAGACGATCTGATCACC 2214
| ||||||| ||||| ||||||||| |||||||||||||||| |||||||||| ||||||
Sbjct 2155 AGGAAGCTCTTGAGAAATCCTCCTTTACTAAAACTTCCAAATATAGACGATCTAATCACC 2214
Query 2215 AGCAATCCTTTATTGAAAGATCGCTCAAGCTTCAGGAGTTTGGCCATTGGCGAAACAGAT 2274
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2215 AGCAATCCTTTATCGAAAGATCGCTCAAGCTTCAGGAGTTTGGCCATTGGCGAGACAGAT 2274
Query 2275 GCATGAACTGAGACTTTAGGTATCCTTGTCAGAATCAACTAGAG 2318
|||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2275 GCATGAACTGAGACTTTAGGTATCCTTGTCAGAATCAAGTAGAG 2318
> Ahg484121 jgi|Araly1|484121|fgenesh2_kg.5__113__AT2G01980.1
Length=3537
Score = 1622 bits (878), Expect = 0.0
Identities = 1698/2090 (81%), Gaps = 71/2090 (3%)
Strand=Plus/Plus
Query 172 ACTAGAGTTCCGTACACCGTCGTTCTTCTCGTCATCGGCATTTTTCTCGGATCCCTAGAA 231
||||| ||||| |||||||||| ||||||||| ||||| ||| ||| ||||| || |||
Sbjct 190 ACTAGGGTTCCTTACACCGTCGCTCTTCTCGTTATCGGAATTGCTCTTGGATCTCTCGAA 249
Query 232 TATGGAACTAAGCATAACCTTGGGAAGCTCGGCCATGGAATTCGTATCTGGAATGGTATC 291
|||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||
Sbjct 250 TATGGAGCTAAACATAACCTTGGAAAGATCGGCCATGGAATTCGTATCTGGAATGATATC 309
Query 292 AACCCTGACCTACTTTTGGCTGTTTTTCTCCCTGTTCTTCTTTTCGAGAGCTCATTCTCC 351
| ||||| || ||||||||||||||||| || | |||||||||||| || || || ||
Sbjct 310 GATCCTGAACTTCTTTTGGCTGTTTTTCTTCCGGCTCTTCTTTTCGAAAGTTCGTTTTCA 369
Query 352 ATGGATGTGCACCAGATCAAGAGATGTATGGGACAAATGGT-TCTGCTTGCTGGACCTGG 410
||||| || |||||||||||||| ||| ||||||||||||| | | |||||||| |||||
Sbjct 370 ATGGAAGTTCACCAGATCAAGAGGTGTCTGGGACAAATGGTGT-TACTTGCTGGCCCTGG 428
Query 411 AGTTCTGATTTCCACCTTTTGTCTCGGA-GCTCTTATAAAGCTTACTTTTCCATATAACT 469
|||||| ||||| || |||||||||| | ||| | ||| | || ||||| ||| |||
Sbjct 429 AGTTCTTATTTCAACAGCTTGTCTCGGATG-GCTTGTGAAGGTCACGTTTCCGTATGACT 487
Query 470 GGGACTGGAAAACATCATTGTTGCTTGGAGGACTTTTAGGAGCTACCGACCCCGTGGCTG 529
||||||||||||| || ||||||||||| |||||| || | ||||||||||| || ||||
Sbjct 488 GGGACTGGAAAACGTCGTTGTTGCTTGGGGGACTTCTAAGTGCTACCGACCCTGTTGCTG 547
Query 530 TTGTTGCTTTGCTAAAGGAGCTTGGTGCTAGTAAGAAGATGACCACGTTAATTGATGGGG 589
|||||||||| |||||||||||||||||||||||||| | | ||| ||||||| ||||
Sbjct 548 TTGTTGCTTTATTAAAGGAGCTTGGTGCTAGTAAGAAGCTAAGCACCATAATTGAAGGGG 607
Query 590 AATCTCTCATGAACGATGGGGTATCGGTTGTGGTTTTTCAATTATTCTTCAAGATGGTGA 649
|||| || ||||| |||||| || ||||| |||| || |||||||| ||||||||||
Sbjct 608 AATCCCTGATGAATGATGGGACGGCGATTGTGCTTTTCCAGTTATTCTTAAAGATGGTGA 667
Query 650 TGGGGCATAACTCTGATTGGGGTTCCATAATCAAATTTCTTGTC-CAAA-ACTCA-TTCG 706
|||| || |||||||| |||||||| ||||||||||||| || | ||| | || || |
Sbjct 668 TGGGACAAAACTCTGACTGGGGTTCTATAATCAAATTTC-TG-CTTAAAGTCGCACTT-G 724
Query 707 GAGCTGTAGGCATTGGTCTAGCTTTTGGAATTGCATCAGTTTTTTGGCTTAAATTCATAT 766
||||||||||||||||||| || ||||| |||||||||||| ||||||| || |||||||
Sbjct 725 GAGCTGTAGGCATTGGTCTGGCGTTTGGCATTGCATCAGTTATTTGGCTCAAGTTCATAT 784
Query 767 TCAATGACACGGTGGCT-CAGATCACTGTAACACTTTCAGCGAGCTATTTCGCCTATTAC 825
|||||||||| || | |||| ||| | ||| || ||| |||||||||||| || |||
Sbjct 785 TCAATGACACTGT-AATAGAGATTACTCTTACAATTGCAGTGAGCTATTTCGCATACTAC 843
Query 826 ACTGCTCAAGAGTGGGCTGGGGTTTCTGGAATTTTGACTGTCATGATTTTGGGGATGTTT 885
|||||||||||||||||||||| |||||| ||||||| || |||| |||||| ||||||
Sbjct 844 ACTGCTCAAGAGTGGGCTGGGGCTTCTGGTGTTTTGACGGTGATGACTTTGGGCATGTTT 903
Query 886 T-TCGCTGCATTTGCAAGGACAGCTTTTAAGGGGGACAGTCACCAGAGTCTGCATCACTT 944
| | |||||| ||||||||||||| ||||| || |||||||| | ||| ||||||||||
Sbjct 904 TAT-GCTGCACTTGCAAGGACAGCCTTTAAAGGTGACAGTCAAAAAAGTTTGCATCACTT 962
Query 945 CTGGGAAATGGCCGCTTACATTGCAAATACACTAG-TTTTTATGCTCAGTGGAGTTATTA 1003
||||||||||| || || ||||||||||| | | | ||||| |||||||| ||| | |
Sbjct 963 CTGGGAAATGGTTGCATATATTGCAAATAC-TTTGATATTTATCCTCAGTGGTGTTGTCA 1021
Query 1004 TCGCTGAAAGCGTTCTTAG-CGGTCAGACAATA-T-CTTACAAAGGAAACTCGTGGAGCT 1060
| |||||| || ||| | | | | | || || | | | ||| |||| || || ||| | |
Sbjct 1022 TTGCTGAAGGCATTC-TCGACAG-C-GATAAGATTGCCTACCAAGGGAATTCATGGGGAT 1078
Query 1061 TCCTTTTCCT-CTTATA-CTTGTATGTCCAACTTTCCCGCT-GTGTTGTTGTTGGAGTTT 1117
| ||||| || | |||| ||| || ||||||| || || | |||||||||||||||||
Sbjct 1079 TTCTTTTTCTAC-TATATCTT-TACATCCAACTATCGCG-TGGTGTTGTTGTTGGAGTTC 1135
Query 1118 TGTACCCATTGCTATGCCGTTCTGGCTATGGGTTGGATTGGAAGGAATCCATCATACTCA 1177
| || |||||| |||| |||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct 1136 TATATCCATTGTTATGTCGTTTTGGCTATGGTTTGGATTGGAAAGAATCCATTATACTCG 1195
Query 1178 CGTGGTCTGGATTAAGGGGTGCTGTTTCGC-TGTCGCTCGCTCTATCTGTAAAACAATCA 1236
|||||||| || |||||||| || | | || | || || |||| || || ||||||
Sbjct 1196 TATGGTCTGGTTTGAGGGGTGCAGTGGCTCTTG-CACTTTCTTTATCCGTGAAGCAATCA 1254
Query 1237 AGTGGAAATTCATATCTCAGTTC-A-GATACGGGAACAAGGTTTCTATTCCTCACAGGTG 1294
|| ||| ||||| || |||| | | || || |||||| |||||| ||| |||| ||||
Sbjct 1255 AGCGGAGATTCACATATCAG--CAAGGAGACTGGAACATTGTTTCTTTTCTTCACGGGTG 1312
Query 1295 GGATTGTTTTCCTAACTTTGGTTGTTAATGGATCCACTACCCAA-TTGCTCTTGCACCTT 1353
| ||||| ||||||||| || | ||||||||||||||||||||| ||| || | | ||||
Sbjct 1313 GAATTGTGTTCCTAACTCTGATAGTTAATGGATCCACTACCCAATTTGTTC-TACGCCTT 1371
Query 1354 CTTCGCATGGACACTTTAACGGCCACTAAGAAACGAATATTGGAGTATACAAAGTTTGAA 1413
||||||||||||| |||| | ||| | ||||||||||||||||| |||||||||| |||
Sbjct 1372 CTTCGCATGGACATTTTACCAGCCCCCAAGAAACGAATATTGGAATATACAAAGTACGAA 1431
Query 1414 ATGATGAAGACTGCTTTAAAAGCTTTTGAAAATCTTGGAGATGACGAGGAGCTTGGATCT 1473
||| |||| | || ||| ||| ||| || |||| |||||||| |||||||| ||| ||
Sbjct 1432 ATGCTGAATAAGGCCTTACGAGCGTTTCAAGATCTAGGAGATGATGAGGAGCTAGGACCT 1491
Query 1474 GCTGACTGGCCTACAGTTATA-AGACATATTTCAAGCTTGAAAGATTTAGAA-GGGAGAC 1531
|||||||||||||||||| | || ||||||||||| | ||| ||| |||| |||| ||
Sbjct 1492 GCTGACTGGCCTACAGTT-GAGAGTTATATTTCAAGCCTAAAAAATTCAGAAGGGGA-AC 1549
Query 1532 AAGTTAATCCTCACGATGGGTAC--GAAGCTGGAAGTCTTGACCCTACGAATATAATGGA 1589
|||| |||||||| || ||| | ||| ||||| ||||||||||| || | ||| |||
Sbjct 1550 TAGTTCATCCTCACAAT-GGTTCTAAAAG-TGGAAATCTTGACCCTAAGAGTTTAAAGGA 1607
Query 1590 CATACGTATACGCTTCTTAAATGGTGTCCAGGCAGCTTACTGGGAGATGCTTGATGATGG 1649
|||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct 1608 CATACGTATACGGTTCTTAAATGGTGTGCAAGCAGCTTACTGGGAGATGCTTGATGAAGG 1667
Query 1650 GAGAATAACACA-ATGTACTGCTAATGTTTTGATGCAATCAGTAGATGAGGCACTTGACC 1708
|||||| | | || |||||||||| |||||||||| ||||| |||||||| ||||| |
Sbjct 1668 CAGAATATCTGAGAT-TACTGCTAATATTTTGATGCAGTCAGTGGATGAGGCTCTTGATC 1726
Query 1709 TTGTTTCTACCAGTTCTTTAAGCGACTGGAGGGGTTTAGAACCGCGTGTTC-ATTTCCCA 1767
|||||||| || |||| | || ||||| ||| || |||| | | || ||||||||
Sbjct 1727 AAGTTTCTACAAG---TTTATGTGATTGGAGAGGTCTAAAACCACACG-TCAATTTCCCA 1782
Query 1768 AATTACTACAAGTTTCTTCAGTCAAAAATTATCCCCCACAAGTTAGTCACGCA-TTTGAT 1826
|||||||||||||||||||| || ||||||||||| |||||||| ||||| | |||| |
Sbjct 1783 AATTACTACAAGTTTCTTCATTCTAAAATTATCCCACACAAGTTGGTCACATACTTTGCT 1842
Query 1827 CGTTGAAAGACTGGAATCTGCTTGTTACATTTCTTCTGCATTTCTCCGTGCCCATAGGAT 1886
|| |||||||||||||||||||| ||||||||| |||||||||| || || |||| ||
Sbjct 1843 -GTCGAAAGACTGGAATCTGCTTGCTACATTTCTGCTGCATTTCTTCGCGCGCATACAAT 1901
Query 1887 TGCGCGACAGCAATTGCAT-ATCTTTCTAGGTAACAGTAACATTGCCTCTACTGTAATCA 1945
||| |||||||||||| || || |||||||| | ||||| |||| || | ||||||||
Sbjct 1902 TGCACGACAGCAATTGTATGAT-TTTCTAGGGGAGAGTAATATTGGTTCCATTGTAATCA 1960
Query 1946 ATGAAAGTGAGGTGGAAGGAGAAGAAGCAAAACAGTTCTTGGAAGATGTCCG-TGATTCA 2004
|||||||||| ||||||||| ||||| ||| ||||||||||| | ||||| | ||||
Sbjct 1961 ATGAAAGTGAAAAGGAAGGAGAGGAAGCGAAAGAGTTCTTGGAAAAAGTCCGATC-TTCA 2019
Query 2005 TTTCCTCAGGTTTTGAGTGTTTTGAAAACAAGACAAGTAACACATT-ATGTGCTGAATCA 2063
||||||||||| | ||||| ||||||||| ||||||||| |||| | ||| |||||||
Sbjct 2020 CTTCCTCAGGTTCTCCGTGTTGTGAAAACAAAACAAGTAACGCATTCA-GTGTTGAATCA 2078
Query 2064 TCTAAATGG-TTATATTAAAAACCTTGAGAAGGTTGGCTTGTTAGAGGGAAAAGAAGTTT 2122
| || ||| ||| ||| ||||||| ||||||||||||||||| ||| ||||||| |
Sbjct 2079 TTTAC-TGGGTTACATTGAAAACCTCGAGAAGGTTGGCTTGTTGGAGCAAAAAGAAATCG 2137
Query 2123 CTCATCTTCATGATGTTGTTCAGTCTGACTTGAAGAAGCTCCTGAGACATCCTCCT-TCA 2181
||||||||||||||| ||| ||| | | |||||| ||||| ||||| | ||||| | |
Sbjct 2138 CTCATCTTCATGATGCTGTCCAGACCGGCTTGAAAAAGCTTTTGAGAAACCCTCCAAT-A 2196
Query 2182 CTAAAACTTCCAAA-T-GTAGACGATC-TGATCACCAGCA-ATCCTTTAT 2227
| ||||||||||| | | || ||| | |||||||| || |||| ||||
Sbjct 2197 GTTAAACTTCCAAAATTG-AG-CGA-CATGATCACCT-CACATCCGTTAT 2242
> Ahg473579 jgi|Araly1|473579|fgenesh2_kg.1__3533__AT1G14660.1
Length=2003
Score = 989 bits (535), Expect = 0.0
Identities = 565/580 (97%), Gaps = 0/580 (0%)
Strand=Plus/Plus
Query 1156 TGGAAGGAATCCATCATACTCACGTGGTCTGGATTAAGGGGTGCTGTTTCGCTGTCGCTC 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 TGGAAGGAATCCATCATACTCACGTGGTCTGGATTAAGGGGTGCTGTTTCGCTGTCGCTC 1116
Query 1216 GCTCTATCTGTAAAACAATCAAGTGGAAATTCATATCTCAGTTCAGATACGGGAACAAGG 1275
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1117 GCTCTATCTGTAAAACAATCAAGTGGAAACCCATATCTCAGTTCGGATACGGGAACAAGG 1176
Query 1276 TTTCTATTCCTCACAGGTGGGATTGTTTTCCTAACTTTGGTTGTTAATGGATCCACTACC 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 TTTCTATTCCTCACAGGTGGGATTGTTTTCCTAACTTTGGTTGTTAATGGATCCACTACC 1236
Query 1336 CAATTGCTCTTGCACCTTCTTCGCATGGACACTTTAACGGCCACTAAGAAACGAATATTG 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237 CAATTGCTCTTGCACCTTCTTCGCATGGACACTTTAACGGCCACTAAGAAACGAATATTG 1296
Query 1396 GAGTATACAAAGTTTGAAATGATGAAGACTGCTTTAAAAGCTTTTGAAAATCTTGGAGAT 1455
|||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||
Sbjct 1297 GAGTATACGAAGTTTGAAATGATGAAGACTGCTCTAAAAGCTTTTGCAAATCTAGGAGAT 1356
Query 1456 GACGAGGAGCTTGGATCTGCTGACTGGCCTACAGTTATAAGACATATTTCAAGCTTGAAA 1515
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 1357 GACGAGGAGCTTGGATCTGCTGACTGGCCTACAGTTATAAAACATATTTCAAGCTTGGAA 1416
Query 1516 GATTTAGAAGGGAGACAAGTTAATCCTCACGATGGGTACGAAGCTGGAAGTCTTGACCCT 1575
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 1417 TATTTAGAAGGGAGACAAGTTAATCCTCAAAATGGGTACGAAGCTGGAAGTCTTGGCCCT 1476
Query 1576 ACGAATATAATGGACATACGTATACGCTTCTTAAATGGTGTCCAGGCAGCTTACTGGGAG 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1477 ACGAATATAATGGACATACGTATACGCTTCTTAAATGGTGTCCAGGCAGCTTACTGGCAG 1536
Query 1636 ATGCTTGATGATGGGAGAATAACACAATGTACTGCTAATGTTTTGATGCAATCAGTAGAT 1695
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 ATGCTTGATGATGGGAGAATAACACAATGTACTGCTAATGTTTTGATGCAATCAGTAGAC 1596
Query 1696 GAGGCACTTGACCTTGTTTCTACCAGTTCTTTAAGCGACT 1735
||||||||||||||||||||||||||||||||||||||||
Sbjct 1597 GAGGCACTTGACCTTGTTTCTACCAGTTCTTTAAGCGACT 1636
Score = 571 bits (309), Expect = 7e-162
Identities = 359/384 (93%), Gaps = 0/384 (0%)
Strand=Plus/Plus
Query 609 GGTATCGGTTGTGGTTTTTCAATTATTCTTCAAGATGGTGATGGGGCATAACTCTGATTG 668
|||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||
Sbjct 639 GGTATCGGTTGTGGTTTTCCAGTTATTTTTCAAGATGGTGATGGGACATAACTCTGATTG 698
Query 669 GGGTTCCATAATCAAATTTCTTGTCCAAAACTCATTCGGAGCTGTAGGCATTGGTCTAGC 728
|||||| || |||| ||||||||| ||||| ||||||||| || |||||||||| |||||
Sbjct 699 GGGTTCTATCATCAGATTTCTTGTTCAAAATTCATTCGGACCTCTAGGCATTGGCCTAGC 758
Query 729 TTTTGGAATTGCATCAGTTTTTTGGCTTAAATTCATATTCAATGACACGGTGGCTCAGAT 788
||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 759 TTTTGGATTTGCATCAGTTTTTTGGCTTAAATTCATATTCAATGACACCGTGGTTCAGAT 818
Query 789 CACTGTAACACTTTCAGCGAGCTATTTCGCCTATTACACTGCTCAAGAGTGGGCTGGGGT 848
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 819 CACTGTAACACTTTCAGCGAGCTATTTCGCTTATTACACTGCTCAAGAGTGCGCTGGGGT 878
Query 849 TTCTGGAATTTTGACTGTCATGATTTTGGGGATGTTTTTCGCTGCATTTGCAAGGACAGC 908
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 879 TTCTGGAATTTTGACTGGCATGATTTTGGGGATGTTTTTCGCCGCATTTGCAAGGACAGC 938
Query 909 TTTTAAGGGGGACAGTCACCAGAGTCTGCATCACTTCTGGGAAATGGCCGCTTACATTGC 968
|||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 939 ATTTAAGGGTGACAGTCACCAGAGTCTGCATCACTTCTGGGAAATGGCCGCTTATATTGC 998
Query 969 AAATACACTAGTTTTTATGCTCAG 992
||||||| ||| |||||| |||||
Sbjct 999 AAATACATTAGCTTTTATACTCAG 1022
Score = 209 bits (113), Expect = 7e-53
Identities = 137/147 (93%), Gaps = 8/147 (5%)
Strand=Plus/Plus
Query 1923 TAACATTGCCTCTACTGTAATCAATGAAAGTGAGGTGGAAGGAGAAGAAGCAAAACAGTT 1982
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1710 TAACATTGCTTCTACTGTAATCAATGAAAGTGAGGTGGAAGGAGAAGAAGCAAAACAGTT 1769
Query 1983 CTTGGAAGATGTCCGTGATTCATTTCCTCAGGTTTTGAGTGTTTTGAAAACAAGACAAGT 2042
| ||||||||||||||||||||||||||||| | | | ||| |||||||||||||||
Sbjct 1770 CCTGGAAGATGTCCGTGATTCATTTCCTCAG-T---G--T-TTT-GAAAACAAGACAAGT 1821
Query 2043 AACACATTATGTGCTGAATCATCTAAA 2069
|||||||||||||||||||||||||||
Sbjct 1822 AACACATTATGTGCTGAATCATCTAAA 1848
Score = 198 bits (107), Expect = 1e-49
Identities = 121/128 (95%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 2146 TCTGACTTGAAGAAGCTCCTGAGACATCCTCCTTCACTAAAACTTCCAAATGTAGACGAT 2205
|||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||
Sbjct 1876 TCTGACTTGAAGAAGCTCCTGAGAAATCCTCCTTTGCTAAAACTTCCAAATATAGACGAT 1935
Query 2206 CTGATCACCAGCAATCCTTTATTGAAAGATCGCTCAAGCTTCAGGAGTTTGGCCATTGGC 2265
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1936 CTGATCACCAGCAATCCTTTATCGAAAGATCACTCAAGCTTCAGGAGTTTGGCCATTGGC 1995
Query 2266 GAAACAGA 2273
|| |||||
Sbjct 1996 GAGACAGA 2003
Score = 180 bits (97), Expect = 5e-44
Identities = 108/113 (96%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 117 TTTCGCGGGAACTTCGCTGGTTCTCGGCACCGCTTGTAGATATTTGTTTAACGGCACTAG 176
||| ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 58 TTT-GCGGGAACTTCACTGGTTCTCGGCACCGCGTGTAGACATTTGTTTAACGGCACTAG 116
Query 177 AGTTCCGTACACCGTCGTTCTTCTCGTCATCGGCATTTTTCTCGGATCCCTAG 229
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 117 AGTTCCGTACACCGTCGTTCTTCTCGTCATCGGCATTGTTCTCGGATCCCTAG 169
Score = 82.4 bits (44), Expect = 1e-14
Identities = 44/44 (100%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 454 ACTTTTCCATATAACTGGGACTGGAAAACATCATTGTTGCTTGG 497
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 576 ACTTTTCCATATAACTGGGACTGGAAAACATCATTGTTGCTTGG 619
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93130649025
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5