BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G14670.1
Length=2165
Score E
Sequences producing significant alignments: (Bits) Value
Ahg911263 jgi|Araly1|911263|Al_scaffold_0001_1517 2204 0.0
Ahg935928 jgi|Araly1|935928|scaffold_500119.1 2008 0.0
Ahg913258 jgi|Araly1|913258|Al_scaffold_0001_3512 523 2e-147
> Ahg911263 jgi|Araly1|911263|Al_scaffold_0001_1517
Length=1599
Score = 2204 bits (1193), Expect = 0.0
Identities = 1312/1370 (96%), Gaps = 6/1370 (0%)
Strand=Plus/Plus
Query 538 TTTGAGATTCTATACAATAAGGACCGTGTGATCGAGATCAGTGCTAGAATGGATCCTCAT 597
||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||
Sbjct 232 TTTGAGATTCTATACAACAAGGACCGTGTGATTGAGATCAGTGCCAGGATGGATCCTCAT 291
Query 598 TCGCTTGTGGATCTCACTGAGGATAAGGAAGTTGATGCAGAGTTTATGTACACTGTGAAG 657
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 292 TCGCTTGTGGATCTCACTGAGGACAAGGAAGTTGATGCAGAGTTTATGTACAATGTGAAG 351
Query 658 TGGAAGGAAACTGAGACTCCTTTTGAGAAAAGAATGGAGAAGTACTCTATGTCTTCTTCT 717
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 TGGAAGGAAACCGAGACCCCTTTTGAGAAAAGAATGGAGAAGTACTCTATGTCTTCTTCT 411
Query 718 CTTCCACATCATTTGGAAATCCACTGGTTCTCCATTATTAACTCCTGTGTCACTGTCCTT 777
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 412 CTTCCACATCACTTGGAAATCCACTGGTTCTCCATTATTAACTCATGTGTCACTGTCCTT 471
Query 778 CTTTTGACTGGATTCCTTGCAACTATCTTGATGCGAGTCCTCAAGAACGATTTCATGAAG 837
|||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 472 CTTTTGGCTGGATTCCTTGCAACTATCTTAATGCGAGTCCTCAAGAATGATTTCATGAAG 531
Query 838 TATGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAAACTGGATGGAAGTACATTCAT 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 532 TATGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAAACTGGATGGAAGTACATCCAT 591
Query 898 GGCGATGTGTTTCGGTTCCCTACTCACAATTCTTTATTTGCTGCATCGCTCGGTAGTGGC 957
|| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 592 GGTGATGTGTTTCGGTTCCCTACTCACAATTCTTTATTTGCCGCATCCCTCGGTAGTGGC 651
Query 958 ACTCAATTGTTCACGCTCACCATATTTATTTTCATGCTTGCTCTTGTTGGAGTGTTCTAC 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 ACTCAATTGTTCACGCTCACCATATTTATTTTCATGCTTGCTCTTGTTGGAGTGTTCTAC 711
Query 1018 CCATACAACCGAGGAGCACTCTTTACCGCTTTGGTGGTCATTTACGCTCTCACTTCTGGA 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 CCATACAACCGAGGAGCACTCTTTACCGCTTTGGTGGTCATTTACGCTCTCACTTCTGGA 771
Query 1078 ATTGCCGGATACACATCTGCCTCTTTCTACTGTCAACTTGAAGGAAAAAGCTGGGTGAGG 1137
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 772 ATTGCCGGATACACATCCGCCTCTTTCTACTGCCAACTTGAAGGAAAAAGCTGGGTGAGG 831
Query 1138 AACTTGTTACTCACTGGATGTCTCTTCTGTGGCCCATTATTCCTAACCTTTTGCTTCCTT 1197
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 832 AACTTGTTACTCACTGGGTGTATCTTCTGTGGCCCATTATTCCTAACCTTTTGCTTCCTT 891
Query 1198 AACACCGTAGCCATCACCTACACTGCAACCGCTGCATTACCCTTTGGAACCATTGTGGTG 1257
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 892 AACACCGTAGCCATCACCTACACTGCAACTGCTGCATTACCCTTTGGAACCATTGTGGTG 951
Query 1258 ATCGTCCTTATATGGACTCTAGTTACCTCACCTTTACTCGTTTTGGGTGGTATCGCGGGT 1317
||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||||||
Sbjct 952 ATCGTCCTTATATGGACTCTAGTCACATCGCCTTTACTCGTCTTGGGTGGTATTGCGGGT 1011
Query 1318 AAAAACAGCAAAGCAGAGTTCCAAGCACCATGCCGTACAACCAAATATCCTCGTGAGATT 1377
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1012 AAAAACAGCAAAGCAGAGTTCCAAGCACCATGCCGTACAACCAAATATCCCCGTGAGATT 1071
Query 1378 CCACCACTCCCTTGGTACAGAAGTGCTATTCCTCAGATGGCCATGGCTGGTTTTCTTCCT 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 CCACCACTCCCTTGGTACAGAAGTGCTATTCCTCAGATGGCCATGGCTGGTTTTCTTCCT 1131
Query 1438 TTCAGTGCCATCTACATCGAGCTTTACTACATTTTCGCTAGTGTCTGGGGTCACCGGATC 1497
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 TTCAGTGCCATCTATATCGAGCTTTACTACATTTTCGCTAGTGTCTGGGGTCACCGGATC 1191
Query 1498 TACACCATCTACAGCATCTTATTCATCGTTTTCATCATTCTCATCATCGTCACTGCTTTT 1557
|||||||||||||||||| | ||||| || ||||||||||||||||| ||||||||||||
Sbjct 1192 TACACCATCTACAGCATCCTCTTCATTGTCTTCATCATTCTCATCATAGTCACTGCTTTT 1251
Query 1558 ATAACCGTTGCCTTGACTTACTTCCAACTCGCTGCTGAAGATCACCAATGGTGGTGGAGA 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 ATAACCGTTGCCTTGACTTACTTCCAACTCGCTGCTGAAGATCACCAATGGTGGTGGAGA 1311
Query 1618 TCATTCCTATGTGGTGGATCGACCGGTTTGTTTATCTACGCATACTGCTTATACTATTAC 1677
|||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 1312 TCATTCCTTTGTGGTGGATCGACCGGTCTGTTCATCTACGCATACTGCTTATACTATTAC 1371
Query 1678 TACGCACGATCAGACATGTCGGGTTTTATGCAAACCTCGTTTTT-CTTCGGATACATGGC 1736
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1372 TATGCACGATCAGACATGTCGGGTTTTATGCAAACCTCGTTTTTTCTTCGGATACAAGGC 1431
Query 1737 TTGCATTTGCTACGGATTCTTCTTAATGCTCGGAACAGTTGGCTTCCGCGCAGCCCTCCT 1796
|||||||||||||||| ||||||||||||| |||||||| |||||| | | |||||||||
Sbjct 1432 TTGCATTTGCTACGGACTCTTCTTAATGCTGGGAACAGTCGGCTTCTGTGGAGCCCTCCT 1491
Query 1797 CTTTGTCCGTCACATTTACCGGTCGATCAAATGCGAGTAAGAAGGTCTGTACACCAATCT 1856
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1492 CTTCGTCCGTCACATTTACCGGTCGATCAAATGCGAGTAAGAAGGTCGGTACACCAATCT 1551
Query 1857 TCTT-ATGTTGATTTCCTTCTTCTTCTTCTGCCTTCTTACGAATTTTGCT 1905
| || | |||| ||| | ||||| |||||| || |||||||||||||||
Sbjct 1552 T-TTCACGTTGGTTT--T-CTTCTGCTTCTGGCTCCTTACGAATTTTGCT 1597
Score = 333 bits (180), Expect = 3e-90
Identities = 188/192 (98%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 58 ATGAGGACACCGACGACGATTCTCCTTCTTGTCGGAGCTATCCTCTTCTCCGGCGCCGGC 117
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGGACACCGACGACGCTTCTCCTTCTTGTCGGAGCTATCCTCTTCTCCGGCGCCGGC 60
Query 118 TATGTCAGATCCGACGCCTCCGACCACCGTTACAAGGAAGGAGACACCGTTCCTCTCTAC 177
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CATGTCAGATCTGACGCCTCCGACCACCGTTACAAGGAAGGAGACACCGTTCCTCTCTAC 120
Query 178 GCCAACAAGGTCGGCCCATTTCACAATCCAAGTGAGACGTATCGATATTTTGATCTTCCC 237
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 121 GCCAACAAGGTCGGCCCATTTCACAATCCAAGTGAGACGTATCGGTATTTTGATCTTCCC 180
Query 238 TTCTGTATCCCA 249
||||||||||||
Sbjct 181 TTCTGTATCCCA 192
> Ahg935928 jgi|Araly1|935928|scaffold_500119.1
Length=1822
Score = 2008 bits (1087), Expect = 0.0
Identities = 1556/1784 (87%), Gaps = 26/1784 (1%)
Strand=Plus/Plus
Query 66 ACCGACGACGATTCTCCTTC-TTGTCGGAGCTATCCTCTTCTCCGGCGCCGGCTATGTCA 124
||| ||| || | |||| || || |||||||| || |||||||||||||||| ||||||
Sbjct 29 ACCAACGTCGCTGCTCC-TCTTTATCGGAGCTCTCATCTTCTCCGGCGCCGGAAATGTCA 87
Query 125 GATCCGACGCCTCCGACCACCGTTACAAGGAAGGAGACACCGTTCCTCTCTACGCCAACA 184
||||||| ||||| ||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct 88 GATCCGATGCCTCAGACCACCGTTACAAGGACGGCGACTCCGTTCCTCTCTACGCCAACA 147
Query 185 AGGTCGGCCCATTTCACAATCCAAGTGAGACGTATCGATATTTTGATCTTCCC-TTCTGT 243
| ||||| || ||||||||||| |||||||||||||| ||||| |||| |||| || |||
Sbjct 148 AAGTCGGTCCGTTTCACAATCCCAGTGAGACGTATCGCTATTTCGATC-TCCCATTTTGT 206
Query 244 ATCCCAGAGGGTGTGAAAGAGAAGAAGGAAGCTCTTGGCGAGGTTCTAAACGGGGATCGG 303
|| ||||||||||||||||| ||||||||||||||||| |||||| | || |||||| ||
Sbjct 207 ATTCCAGAGGGTGTGAAAGATAAGAAGGAAGCTCTTGGTGAGGTTTTGAATGGGGATAGG 266
Query 304 CTAGTTAGCGCTCCATACAAGCTCAACTTCAGAGATGAAAAAGAGTCTGAGGTATACTG- 362
|| ||||| |||||||||||||| ||||| ||||| || ||||| || || || |||||
Sbjct 267 CTTGTTAGTGCTCCATACAAGCTTAACTTTAGAGAGGAGAAAGACTCAGATGTTTACTGC 326
Query 363 CAACAAGAAG-TTGAGTAAAGAAGAGGTCAAACAG-TTCAGAAAAGCTGTTGAGAAGGAC 420
| | |||||| || || | |||||| ||| ||||| ||| ||| ||||||||| || ||
Sbjct 327 CGA-AAGAAGCTT-AGCAGAGAAGAAGTCGAACAGTTTC-GAAGAGCTGTTGAAAAAGAT 383
Query 421 TACTACTTCCAGATGTACTATGATGATCTACCTATCTGGGGATTCATTGGAAAGGTTGAC 480
|| ||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||
Sbjct 384 TATTACTTTCAGATGTATTATGATGATTTGCCTATCTGGGGATTCATTGGAAAGGTTGAC 443
Query 481 AAGGATATCAAATCTGATCCGAGTGAATTCAAATATTTCTTGTACAAGCACATTCAGTTT 540
|| || | ||||||||||||||| || |||||||||||| | ||||||||||| || |||
Sbjct 444 AAAGAGAGCAAATCTGATCCGAGCGAGTTCAAATATTTCCTCTACAAGCACATCCAATTT 503
Query 541 GAGATTCTATACAATAAGGACCGTGTGATCGAGATCAGTGCTAGAATGGATCCTCATTCG 600
|||||| | || || ||||| | ||||| || |||| ||||||||||||||||||||||
Sbjct 504 GAGATTTTGTATAACAAGGATAGAGTGATTGAAATCAATGCTAGAATGGATCCTCATTCG 563
Query 601 CTTGTGGATCTCACTGAGGATAAGGAAGTTGATGCAGAGTTTATGTACACTGTGAAGTGG 660
||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 564 CTTGTGGATCTTACTGAGGATAAGGAAGTCGATGCTGAGTTTATGTACACTGTGAAATGG 623
Query 661 AAGGAAACTGAGACTCCTTTTGAGAAAAGAATGGAGAAGTACT-CTATGTCTTCTTCTCT 719
||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct 624 AAGGAAACTGAGACTCCTTTTGAGAAAAGAATGGACAAGTA-TGCTATGTCTTCTTCTCT 682
Query 720 TCCACATCATTTGGAAATCCACTGGTTCTCCATTATTAACTCCTGTGTCACTGTCCTTCT 779
||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct 683 TCCACATCACTTGGAAATCCACTGGTTCTCCATTATTAACTCCTGCGTTACTGTCCTCCT 742
Query 780 TTTGACTGGATTCCTTGCAACTATCTTGATGCGAGTCCTCAAGAACGATTTCATGAAGTA 839
||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||||||||
Sbjct 743 TTTGACTGGTTTCCTTGCAACCATCTTGATGCGGGTTCTCAAGAATGATTTCATGAAGTA 802
Query 840 TGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAAACTGGATGGAAGTACATTCATGG 899
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 803 TGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAAACTGGATGGAAATACATTCACGG 862
Query 900 CGATGTGTTTCGGTTCCCTACTCACAATTCTTTATTTGCTGCATCGCTCGGTAGTGGCAC 959
||||| || || ||||| | ||||| ||| | ||||||||||| ||||| || || ||
Sbjct 863 AGATGTCTTCCGTTTCCCAAAGCACAAATCTCTCTTTGCTGCATCTCTCGGCAGCGGTAC 922
Query 960 TCAATTGTTCACGCTCACCATATTTATTTTCATGCTTGCTCTTGTTGGAGTGTTCTACCC 1019
|| |||||||| || ||||| || |||||||||||| | ||||||||||||||||| ||
Sbjct 923 CCAGTTGTTCACTCTGACCATCTTCATTTTCATGCTTTCACTTGTTGGAGTGTTCTATCC 982
Query 1020 ATACAACCGAGGAGCACTCTTTACCGCTTTGGTGGTCATTTACGCTCTCACTTCTGGAAT 1079
||||||||| ||||||||||| ||||||||||| || || ||||||||||| ||||||||
Sbjct 983 ATACAACCGTGGAGCACTCTTCACCGCTTTGGTCGTGATCTACGCTCTCACATCTGGAAT 1042
Query 1080 TGCCGGATACACAT-C-TGCCTCTTTCTACTGTCAACTTGAAGGAAA-AAGCTGGGTGAG 1136
|||||||||||| | | | ||||||||||||||||||| |||||||| || ||||||||
Sbjct 1043 TGCCGGATACAC-TGCCT-CCTCTTTCTACTGTCAACTCGAAGGAAAGAAT-TGGGTGAG 1099
Query 1137 GAACTTGTTACTCACTGGATGTCTCTTCTGTGGCCCATTATTCCTAACCTTTTGCTTCCT 1196
|| ||| | || || ||| ||||||||||||||||| ||||||| ||||| || |||||
Sbjct 1100 AAATTTGCTGCTTACGGGAGGTCTCTTCTGTGGCCCACTATTCCTCACCTTCTGTTTCCT 1159
Query 1197 TAACACCGTAGCCATCACCTACACTGCAACCGCTGCA-TTACCCTTTGGAACCATTGTGG 1255
||||| || || || |||||| |||||| || || || ||||||||||||||||| |
Sbjct 1160 AAACACAGTTGCAATTGCCTACAGTGCAACTGCCGCTCTT-CCCTTTGGAACCATTGTAG 1218
Query 1256 TGATCGTCCTTATATGGACTCTAGTTACCTCACCTTTACTCGTTTTGGGTGGTATCGCGG 1315
|||||||||| |||||||| ||||| || || |||||||| || ||||||||||| || |
Sbjct 1219 TGATCGTCCTCATATGGACACTAGTCACTTCGCCTTTACTTGTGTTGGGTGGTATTGCCG 1278
Query 1316 GTAAAAACAGCAAAGCAGAGTTCCAAGCACCA-TGCCGTACAACCAAATATCCTCGTGAG 1374
|||||||||||||||| ||||||||||| ||| | ||| || || || |||||||| |||
Sbjct 1279 GTAAAAACAGCAAAGCTGAGTTCCAAGCTCCAGT-CCGCACCACTAAGTATCCTCGGGAG 1337
Query 1375 ATTCCACCACTCCCTTGGTACAGAAGTGCTATTCCTCAGATGGCCATGGCTGGTTTTCTT 1434
|| || |||||||| |||||||| |||||||| ||||||||||||||||| || ||||||
Sbjct 1338 ATCCCGCCACTCCCATGGTACAGGAGTGCTATACCTCAGATGGCCATGGCCGGATTTCTT 1397
Query 1435 CCTTTCAGTGCCATCTACATCGAGCTTTACTACAT-TTTCGCTAGTGTCTGGGGTCACCG 1493
|||||||||||||||||||||||||| || ||||| ||| || ||||| ||||| || ||
Sbjct 1398 CCTTTCAGTGCCATCTACATCGAGCTATATTACATCTTT-GCCAGTGTTTGGGGCCATCG 1456
Query 1494 GATCTACACCATCTACAGCATCTTATTCATCGTTTTCATCATTCTCATCATCGTCACTGC 1553
||||||||||| ||||||||| | |||||||| |||||||| || | |||||||||||
Sbjct 1457 TATCTACACCATTTACAGCATCCTCTTCATCGTCTTCATCATCCTGTTGATCGTCACTGC 1516
Query 1554 TTTTATAACCGTTGCC-TTGACTTACTTCCAACTCGCTGCTGAAGATCACCAATGGTGGT 1612
||||||||| |||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct 1517 TTTTATAACAGTTGCCCTT-ACTTACTTCCAACTCGCTGCTGAAGATCATGAATGGTGGT 1575
Query 1613 GGAGATCATTCCTATGTGGTGGATCGACCGGTTTGTTTATCTACGCATACTGCTTATACT 1672
|||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||
Sbjct 1576 GGAGATCATTCCTATGTGGTGGATCGACTGGTCTGTTCATCTACGCATACTGCTTATACT 1635
Query 1673 ATTACTACGCACGATCAGACATGTCGGGTTTTATGCAAACCTCGTTTTTCTTCGGATACA 1732
||||||||||| ||||||||||||| ||||| |||||||| || || |||||||| ||||
Sbjct 1636 ATTACTACGCAAGATCAGACATGTCCGGTTTCATGCAAACATCCTTCTTCTTCGGTTACA 1695
Query 1733 TGGCTTGCATTTGCTACGGATTCTTCTTAATGCTCGGAACAGTTGGCTTCCGCGCAGCCC 1792
||||||||||||| ||||| |||||| | ||||| ||||| |||||||||||||| || |
Sbjct 1696 TGGCTTGCATTTGTTACGGTTTCTTCCTCATGCTTGGAACTGTTGGCTTCCGCGCTGCTC 1755
Query 1793 TCCTCTTTGTCCGTCACATTTACCGGTCGATCAAATGCGAGTAA 1836
||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct 1756 TCCTCTTCGTCCGCCACATTTACCGGTCGATTAAATGCGAGTAA 1799
> Ahg913258 jgi|Araly1|913258|Al_scaffold_0001_3512
Length=345
Score = 523 bits (283), Expect = 2e-147
Identities = 330/351 (94%), Gaps = 9/351 (3%)
Strand=Plus/Plus
Query 1252 GTGGTGATCGTCCTTATATGGACTCTAGTTACCTCACCTTTACTCGTTTTGGGTGGTATC 1311
||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||
Sbjct 1 GTGGTGATCGTCCTTATATGGACTCTAGTCACATCGCCTTTACTCGTCTTGGGTGGTATC 60
Query 1312 GCGGGTAAAAACAGCAAAGCAGAGTTCCAAGCACCATGCCGTACAACCAAATATCCTCGT 1371
||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| |||
Sbjct 61 GCGGGCAAAAACAGCAAAGCGGAGTTCCAAGCATCATGCCGTACAACCAAATATCCCCGT 120
Query 1372 GAGATTCCACCACTCCCTTGGTACAGAAGTGCTATTCCTCAGATGGCCATGGCTGGTTTT 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GAGATTCCACCACTCCCTTGGTACAGAAGTGCTATTCCTCAGATGGCCATGGCTGGTTTT 180
Query 1432 CTTCCTTTCAGTGCCATCTACATCGAGCTTTACTACATTTTCGCTAGTGTCTGGGGTCAC 1491
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TTTCCTTTCAGTGCCATCTACATCGAGCTTTACTACATTTTCGCTAGTGTCTGGGGTCAC 240
Query 1492 CGGATCTACACCATCTACAGCATCTTATTCATCGTTTTCATCATTCTCATCATCGTCACT 1551
|||||||||||||||||||||||| | | | | |||||||||||||| | |||||
Sbjct 241 CGGATCTACACCATCTACAGCATCGT---C-T--T---CATCATTCTCATCACCTTCACT 291
Query 1552 GCTTTTATAACCGTTGCCTTGACTTACTTCCAACTCGCTGCTGAAGATCAC 1602
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 GCTTTTATAACCGTTGCCTTGACTTACTTCCAACTCGCTGCTGAAGATCAC 342
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81475034055
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5