BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G14690.1
Length=2458
Score E
Sequences producing significant alignments: (Bits) Value
Ahg312467 jgi|Araly1|312467|fgenesh1_pm.C_scaffold_1001247 1633 0.0
Ahg484109 jgi|Araly1|484109|fgenesh2_kg.5__101__AT2G01910.1 1445 0.0
> Ahg312467 jgi|Araly1|312467|fgenesh1_pm.C_scaffold_1001247
Length=1905
Score = 1633 bits (884), Expect = 0.0
Identities = 1000/1055 (95%), Gaps = 12/1055 (1%)
Strand=Plus/Plus
Query 1083 AGTTAAAGGATGTAGCGGGTTCACTTTTTGAGCTATGGAATCTAATGGACACATCTCAAG 1142
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 854 AGTTAAAGGATGTAGCGGGTTCACTTTTCGAGCTATGGAATCTAATGGACACATCTCAAG 913
Query 1143 AAGAAAGAACGAAATTTGCAAGTGTCAGTTATGTTGTAAGATCATCAGAATCTGATATCA 1202
|||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 914 AAGAAAGAACTAAATTTGCAAGAGTCAGTTATGTTGTAAGATCATCTGAATCTGATATCA 973
Query 1203 CTGAGCCAAATATCCTCTCTAGTGAAACAATTGAACAGGTGTCTGCAGAAGTAGACTGTT 1262
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 974 CTGAGCCAAATATCCTTTCTACTGAAACAATTGAACAGGTGTCTGCAGAAGTAGACTCTT 1033
Query 1263 TTAATAAGCTGAAAGCTAGCAGAATGAAGGAGCTTGTGATGAAAAGAAGGACTGAGTTAG 1322
||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||
Sbjct 1034 TTAATAAGCTGAAAGCTAGTAGAATGAAGGAACTTGTGATGAAAAGAAGGTCTGAGTTAG 1093
Query 1323 AGAATCTTTGCAGATTGGCTCACATTGAGGCTGACACAAGCACATCGCTTGAGAAATCAA 1382
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1094 AGAATCTTTGCAGATTGGCTCACATTGAGGCTAACACAAGCACATCTCTTGAGAAATCAA 1153
Query 1383 CTGCTTTGATTGATTCT-G--------GATTAGTGGACCCTTCAGAGCTTCTTACAAATA 1433
||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 1154 CTGCTTTGATTGATTCTGGTAATAAAAGATTAGTGGACCCTTCAGAGCTTCTTACAAATA 1213
Query 1434 TTGAATTGCATATAAACAAAATCAAAGAAGAAGCACATAGCCGGAAAGAAATAATCGATA 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1214 TTGAATTGCATATAAACAAAATCAAAGAAGAAGCACATAGCCGGAAAGAAATAATCGATA 1273
Query 1494 GGATTGACCGCTGGTTATCTGCGTGCGAAGAGGAAAACTGGCTAGAAGAATACAATCAGG 1553
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1274 GGATTGACCGCTGGCTATCTGCGTGTGAAGAGGAAAACTGGCTAGAAGAATACAATCAGG 1333
Query 1554 ATGAAACCCGGTATAGTGCCGGAAGAGGTGGACATGTAAACCTCAAGCATGCAGAACGCG 1613
||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| |
Sbjct 1334 ATGAAACCCGGTATAGTGCTGGAAGAGGTGGACACGTAAACCTCAAGCACGCAGAACGAG 1393
Query 1614 CCCGGATCACAGTAAACAAGATCCCATCAATGGTTGACAATCTCATCAAGAAAACACTTC 1673
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1394 CCCGGATCACAGTAAACAAGATCCCATCAATGGTTGACAATCTCATCAAGAAAACACTTT 1453
Query 1674 TATGGGAGGACGAAACACGGAAATCATTTCTATATGATGGTGTTCGATTGGTATCCATAC 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1454 TATGGGAGGACGAAACACGGAAATCATTTCTATATGATGGTGTTCGATTGGTATCCATAC 1513
Query 1734 TTGAAGATTATAAATTGACAAGGAAACAACAGGAAGAGGAAAAGAGACGATACCGGGATC 1793
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 1514 TTGAAGATTATAAATTGACAAGGAAACAACAGGAGGAGGAAAAGAAACGATACCGGGATC 1573
Query 1794 AAAAGAAGATGCAGGATCTGTTAATAAAGCGGAGGGAATCAATTTATGGATCAAAACCGA 1853
||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||
Sbjct 1574 AAAAGAAGATGCATGATCTCTTAATAAAGAGGAGGGAATCAATTTACGGATCAAAACCGA 1633
Query 1854 GTCCAAGAAGAAGCAACAGTGTAAGAAAGACCAACGGATACAATGGGGATGCATCTGTGC 1913
||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||
Sbjct 1634 GTCCAAGAAGAAGCAACAGCGTAAAAAAGCCCAACGGATACAATGGGGATGCATCTGTGC 1693
Query 1914 CTCCTACGCCCCGCAGAAACTCAGCTGGAGCAACAAATAACGACATAATGACCACCCCAA 1973
|||||||||| |||||||||||||||||||||||||||| |||||| |||||| || |
Sbjct 1694 CTCCTACGCCTCGCAGAAACTCAGCTGGAGCAACAAATACCGACATTATGACC-CCG-A- 1750
Query 1974 GATCATACTCAAGCCATCGCCAAAACGGATATTTCAAGGAAGTAAGAAGACTGTCAACAG 2033
|||| ||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||
Sbjct 1751 GATCTTACTCGAGCCATCGTCAAAACGGATATTTCAAGGAAGTAAGGAGACTCTCAACAG 1810
Query 2034 CTCCTTTGAACTTTGTGGCAATACCAAAGGAAGACTCTGTCTCTACATACACTTCGGTTT 2093
|||| |||||||||||||| ||||||||||||||||||||||| |||||||| || ||||
Sbjct 1811 CTCCATTGAACTTTGTGGCCATACCAAAGGAAGACTCTGTCTCAACATACACATCAGTTT 1870
Query 2094 GCGGCTCTGAACCAGATTCACCGTTATATAACTAA 2128
||||||||||||||||||||||||||||||||||
Sbjct 1871 ACGGCTCTGAACCAGATTCACCGTTATATAACTAA 1905
Score = 1253 bits (678), Expect = 0.0
Identities = 738/768 (96%), Gaps = 0/768 (0%)
Strand=Plus/Plus
Query 317 ATGCTGGAGATTGAAAGCCCTACGAGTCTCTGTTTCCGTACAAACACTACTTGTAATGCT 376
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1 ATGCTGGAGATTGAAAGCCCTACGAGTCTCTGTTTCCGTGCAAACACTACTTGTAATGCT 60
Query 377 CTGCTTCGAGAGCTTCAGAAAATATGGGTTGATATTGGTGAGAGTGATGCTGAGAAAGAC 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CTGCTTCGAGAGCTTCAGAAAATATGGGTTGATATTGGTGAGAGTGATGCTGAGAAAGAC 120
Query 437 CGGATGCTAATGGAATTGGAGAAGGAATGTCTTGAAATCTACAGAAGAAAAGTGGACGAG 496
|||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||
Sbjct 121 CGGATGCTAATGGAATTGGAGAAGGAATGTCTCGAAATTTACAGGAGAAAAGTGGATGAG 180
Query 497 GCTGCTAATTCCAAGGCACAGCTTCATCAGTCATTGGTATCAATTGAAGCTGAAATTGCT 556
||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 181 GCTGCAAATTCTAAGGCACAGCTTCATCAATCATTGGTATCAATTGAAGCTGAGATTGCT 240
Query 557 TCTTTACTGGCTGCTCTTGGAGTGTTCAACAGCCACTCACCGATGAAAGCAAAGGAAGGT 616
|||||| |||||||||||||| |||| |||| |||||||||||| |||||||||||||||
Sbjct 241 TCTTTAGTGGCTGCTCTTGGACTGTTAAACATCCACTCACCGATCAAAGCAAAGGAAGGT 300
Query 617 TCAAAATCATTGAAAGAAAAACTTGCTGCTGTGAGGCCAATGCTTGAGGACTTAAGATTG 676
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 301 TCAAAATCATTGAAAGAAAAACTTGCTGCTGTGAGGCCAATGCTTGAAGACTTAAGATTG 360
Query 677 CAAAAAGATGAAAGAATGAAGCAATTTGTGGATATAAAAGCACAAATTGAGAAGATGAGT 736
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 361 GAAAAAGATGAAAGAATGAAGCAATTTGTGGATATAAAAGCGCAAATTGAGAAGATGAGT 420
Query 737 GGTGAAATATCTGGATACAGTGACCAACTCAACAAAACGATGGTCGGTTCTTTGGCTCTT 796
|||||||| ||||||||||||||||||||||||||| ||||| | |||||||||||||||
Sbjct 421 GGTGAAATCTCTGGATACAGTGACCAACTCAACAAAGCGATGCTTGGTTCTTTGGCTCTT 480
Query 797 GATGAACAAGACCTGACTCTTCGGAAGCTTAACGAGTATCAAACACATCTCCGCTCGCTC 856
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 GATGAACAAGACTTGACTCTTCGGAAGCTTAACGAGTATCAAACACATCTCCGCTCGCTC 540
Query 857 CAGAAAGAGAAGTCGGATCGTCTGAACAAGGTTTTGGACTATGTGAATGAGGTGCACACT 916
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 541 CAGAAAGAGAAGTCGGATCGTCTGAACAAGGTTTTGGATTATGTGAATGAGGTGCACACT 600
Query 917 CTATGTGGTGTTCTTGGAGTCGACTTTGGTCAAACTGTTAGTGAGGTTCATCCGAGCTTA 976
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 601 CTATGCGGTGTTCTTGGAGTCGACTTTGGTCAAACTGTTAGCGAGGTTCATCCGAGCTTA 660
Query 977 CATAGGACTGACCATGAGCAGTCTACAAACATTTCTGATGATACATTGGATGGTCTACAC 1036
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CATAGGACTGACCATGAGCAGTCTACAAACATTTCTGATGATACATTGGATGGTCTACAA 720
Query 1037 CACATGATTCATAAGCTGAAAACCGAAAGGAGCGTTCGGTTTCAAAAG 1084
||||||||| |||||||||||||||||| ||| || ||||||||||||
Sbjct 721 CACATGATTGATAAGCTGAAAACCGAAAAGAGAGTCCGGTTTCAAAAG 768
> Ahg484109 jgi|Araly1|484109|fgenesh2_kg.5__101__AT2G01910.1
Length=2391
Score = 1445 bits (782), Expect = 0.0
Identities = 1511/1858 (81%), Gaps = 69/1858 (4%)
Strand=Plus/Plus
Query 295 GAGAGAGGACAAA-TTAGCTG-AAATGCTGGAGATTGAAAG-CCCTACGAGTCTCTGTTT 351
||| ||||| ||| ||||||| |||||||||| |||| ||| ||| | | ||| | |||
Sbjct 251 GAGTGAGGAAAAATTTAGCTGAAAATGCTGGAAATTGGAAGTCCCAATG-CTCTGTTTTT 309
Query 352 CCGTACAAACACTACTTGTAATGCTCTGCTTCGAGAGCTTCAGAAAATATGGGTTGATAT 411
|||||| ||||||||||||||| ||| || || ||||||||||||||||||||||| ||
Sbjct 310 CCGTACGAACACTACTTGTAATAATCTTCTCCGTGAGCTTCAGAAAATATGGGTTGAAAT 369
Query 412 TGGTGAGAGTGATG-CTGAGAAAGACCGGATGCTAATGGAATTGGAGAAG-GAATGTCTT 469
|||||||||||| | |||||||||| ||||||| |||||||||||| || |||||||||
Sbjct 370 TGGTGAGAGTGA-GACTGAGAAAGATAGGATGCTGATGGAATTGGAG-AGAGAATGTCTT 427
Query 470 GAAATCTA-CAGAAGAAAAGTGGACGAGGCTGCTAATTCCAAGGCACAGCTTCATCAGTC 528
||||||| || ||||||||| ||||||||||| ||||| || ||| |||||||||||||
Sbjct 428 CAAATCTATCA-AAGAAAAGTTGACGAGGCTGCAAATTCTAAAGCAAAGCTTCATCAGTC 486
Query 529 AT-TGGTATCAATTGAAGCTGAAATTGCTTCTTTACTGGCTGCTCTTGGAGTGTTCAACA 587
| | | | |||| ||||||||| ||||||||||| ||||||| ||||| ||||| ||||
Sbjct 487 -TGTTGCAGCAATAGAAGCTGAAGTTGCTTCTTTAATGGCTGCCCTTGGTGTGTTAAACA 545
Query 588 GCCACTCACCGATGAAA--GCA-AAGGAAGGTTCAAAATCATTGAAAGAAAAACTTGCTG 644
| |||||||||| ||| | | || || ||||||| |||||||||||||| ||||| |
Sbjct 546 TCAACTCACCGATTAAATTGGATAA--AA-GTTCAAAGTCATTGAAAGAAAAGCTTGCAG 602
Query 645 CTGTGAGGCCAAT-GCTTGAGGACTTAAG-ATTGCAAAAAGATGAAAGAATGAAGCAATT 702
|||||| || | | ||||||| || || ||| |||||||| || ||||||||||| ||
Sbjct 603 CTGTGACTCCTCTAG-TTGAGGAATTGAGAATT-CAAAAAGAGGAGAGAATGAAGCAGTT 660
Query 703 TGT-GGATATAAAAGCACAAATTGAGAAGATGAGTGGTGAAATATCTGGATACAGTGACC 761
| | |||||||| || |||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 661 T-TCCGATATAAAGGCGCAAATTGAGAAGATTAGTGGGGAAATCTCTGGATACAGTGACC 719
Query 762 AACTCAACAAAACGATGGTCGGTTCTTTGGCTCTTGATGAACAAGACCTGACTCTTCGGA 821
| |||||||| | ||| | ||| ||| |||| || ||||||||| ||||||| |||
Sbjct 720 ATCTCAACAAGGCCATGAACATTTCCTTGACTCTCGAAGAACAAGACTTGACTCTGAGGA 779
Query 822 AGCTTAACGAGTATCAAACACATCTCCGCTCGCTCCAGAAA-GAGAAGTCGGATCGTCTG 880
| ||||||||||||||||||||||||||| |||| || ||| || ||||| ||||||||
Sbjct 780 AACTTAACGAGTATCAAACACATCTCCGCACGCTTCA-AAAGGAAAAGTCTGATCGTCTC 838
Query 881 AACAAGGTTTTGGACTATGTGAATGAGGTGCACACTCTATGTGGTGTTCTTGGAGTCGAC 940
||||| || |||| ||||| || || || ||| | ||||| |||||||||||||| |||
Sbjct 839 AACAAAGTCTTGGGTTATGTCAACGAAGTCCACGCACTATGCGGTGTTCTTGGAGTTGAC 898
Query 941 TTTGGTCAAACTGTTAGTGAGGTTCATCCGAGCTTACATAGGACTGACCATGAGCAGTCT 1000
||| ||||||| ||| ||||||||||||| |||||||||||||| ||||| ||||| |||
Sbjct 899 TTTAGTCAAACAGTTTGTGAGGTTCATCCTAGCTTACATAGGACAGACCAAGAGCAATCT 958
Query 1001 ACAAACATTTCTGATGA-TACATTGGATGGTCTACACCACATGATTCATAAGCTGAAAAC 1059
||||||||| |||| | ||| | || || || | ||||||||||| ||||| |||||
Sbjct 959 ACAAACATTAGTGAT-AGCACACTAGAGGGCCTTGAGCACATGATTCAAAAGCTAAAAAC 1017
Query 1060 CGAAAGGAGCGTTCGGTTTCAAAAGTTAAAGGATGTAGCGGGTTCACTTTTTGAGCTATG 1119
|| || | | || ||||||||| |||||||||||| || |||||| || ||||||||
Sbjct 1018 TGAGAGAAAAGCCCGATTTCAAAAGCTAAAGGATGTAGTGGCTTCACTGTTCGAGCTATG 1077
Query 1120 GAATCTAATGGACACATCTCAAGAAGAAAGAACGAAATTTGCAAGTGTCAGTTATGTTGT 1179
||| |||||||||||| | |||||||| ||||| ||||||| || || | |||||||||
Sbjct 1078 GAACCTAATGGACACACCACAAGAAGAGAGAACTAAATTTGGAAAAGTTACTTATGTTGT 1137
Query 1180 AAGATCATCAGAATCTGATATCACTGAGCCAAATATCCTCTCTAGTGAAACAATTGAACA 1239
||||||||| ||| || |||||||||||| ||||| || | || |||||||||||
Sbjct 1138 AAGATCATCTGAAGCTAATATCACTGAGCTGGGCATCCTTTCGACCGAGACAATTGAACA 1197
Query 1240 GGTGTCTGCAGAAGTAGACTGTTTTAATAAGCTGAAAGCTAGCAGAATGAAGGAGCTTGT 1299
||| ||||||||||| || || | | ||| |||||||| ||||||||||||||||||||
Sbjct 1198 GGTATCTGCAGAAGTGGAAAGTCTCAGTAAACTGAAAGCAAGCAGAATGAAGGAGCTTGT 1257
Query 1300 GATGAAAAGAAGGA-CTGAGTTAG-AGAATCTTTGCAGATTGGCTCACATTGAGGCTGAC 1357
|||||| ||| || | ||||||| || |||||| |||| | |||||||| | |||||
Sbjct 1258 AATGAAACGAA-GATCCGAGTTAGAAG-ATCTTTACAGACTAACTCACATTCAACCTGAC 1315
Query 1358 ACAAGCACATC-GCTTGAGAAATCAACTGCTTTGATTGATTCTGGATTAGTGGACCCTTC 1416
|||||||| || || ||||||||||||||| || || || ||||||||||||||||||||
Sbjct 1316 ACAAGCACTTCTGC-TGAGAAATCAACTGCCTTAATAGAATCTGGATTAGTGGACCCTTC 1374
Query 1417 AGAGCTTCTTACAAATATTGAATTGCATATAAACAAAATCAAAGAAGAAGCACATAGCCG 1476
|||||||||| |||||| ||| |||| ||||||||||| ||||| |||||||| |||||
Sbjct 1375 AGAGCTTCTTGGAAATATCGAAATGCAAATAAACAAAATTAAAGATGAAGCACAGAGCCG 1434
Query 1477 GAAAGAAATAATCGATAGGATTGACCGCTGGTTATCTGCGTGCGAAGAGGAAAACTGGCT 1536
|||||| || || || || |||||||| ||| | ||||| || ||||||||||| ||| |
Sbjct 1435 GAAAGATATCATGGACAGAATTGACCGTTGGCTCTCTGCATGTGAAGAGGAAAATTGGTT 1494
Query 1537 AGAAGAATACAATCAGGATGA-AACCCGGTATAGTGCCGGAAGAGGTGGACATGTAAACC 1595
||||| || |||| |||||| |||| ||||||| || ||||||||||||||||||||||
Sbjct 1495 GGAAGAGTATAATCTGGATGAGAACC-GGTATAGCGCAGGAAGAGGTGGACATGTAAACC 1553
Query 1596 TCAAGCATGCAGAACGCGCCCGGATCAC-AGTAAACAAGATCCCATC-AATGGTTGACAA 1653
|||||| ||||||||| |||||| | || | | || |||||||| | ||||||||||||
Sbjct 1554 TCAAGCGTGCAGAACGAGCCCGGGTTACTA-TCAATAAGATCCC-TGGAATGGTTGACAA 1611
Query 1654 TCTCATCAAGAAAACACTTCTATGGGAGGACGAAACACGGAAATCATTTCTATATGATGG 1713
||| ||||||||||||||| | ||||| | || | | ||| ||||||||||| || ||
Sbjct 1612 TCTTATCAAGAAAACACTTGTGTGGGAAAATGACATGCAGAATTCATTTCTATACGACGG 1671
Query 1714 TGTTCGATTGGT-ATCCATACTTGAAGATTATAAATTGACAAGGAAACAACAGGAAGAGG 1772
|||||||||||| | | ||||| ||||| |||||| ||||||||||||||||||||||||
Sbjct 1672 TGTTCGATTGGTTAAC-ATACTAGAAGACTATAAACTGACAAGGAAACAACAGGAAGAGG 1730
Query 1773 AAAAGAGACGATACCGGGATCAAAAGAAGATGCAGGATCTGTTAATAAAGCGGAGGGAAT 1832
|||||| | ||||| ||||||||||||||| ||||||||| || ||| | |||||||
Sbjct 1731 AAAAGAAAAGATACAGGGATCAAAAGAAGAGGCAGGATCTCCTACTAACCCAAAGGGAAT 1790
Query 1833 CAATTTATGGATCAAAACCGAGTCCAAGAAGAAGCAACAG-TGTAAGAAAGACCAACGG- 1890
| ||||| ||||||||||| |||||||||||||||| ||| | | |||||| |||| ||
Sbjct 1791 CCATTTACGGATCAAAACCAAGTCCAAGAAGAAGCAGCAGCT-TCAGAAAGCCCAATGGT 1849
Query 1891 ---A---T-A-CAATGGGGATGCATCTGTGCCTCCTACGCCCCGCAGAAACTCAGCTGG- 1941
| | | ||||||| ||| || |||||||| ||||| || |||| ||| || ||
Sbjct 1850 TTCAACATTAGCAATGGGAATGGTTCAGTGCCTCCCACGCCTCGTAGAAGCTCGGCAGGG 1909
Query 1942 AGCAACAAATAAC-GACATAATGACCA-CCCCAAGATCATACTCAAG-C--CATCGCCAA 1996
| |||||| | | ||| | | | | |||| ||||| |||||| | | |||||||||
Sbjct 1910 A-CAACAACTC-CTGACCTTCTT-CTAACCCCGAGATCTTACTCAGGTCATCATCGCCAA 1966
Query 1997 AACGGATATTTCAAGGAAGTAAGAAGACTGTCAAC-AGCTCCTTTGAACTTTGTGGCAAT 2055
||||| |||||||| ||| | || ||||| | | | |||| ||||||| |||||| ||
Sbjct 1967 AACGGGTATTTCAAAGAATTTAGGAGACTCACTTCTA-CTCCATTGAACTATGTGGCCAT 2025
Query 2056 ACCAAAGGAAGACT-CTGTCTCTAC-A--TACACTTCGGTTTGCGGCTCTGAACCAGA 2109
| ||||||||| | | || ||||| | ||||| ||| ||| ||||||| |||||
Sbjct 2026 GCAAAAGGAAGA-TACAGTTTCTACTACCTACACATCGATTTATAGCTCTGAGCCAGA 2082
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92635475840
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5