BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G14830.1
Length=2323
Score E
Sequences producing significant alignments: (Bits) Value
Ahg920383 jgi|Araly1|920383|scaffold_101664.1 3206 0.0
Ahg472170 jgi|Araly1|472170|fgenesh2_kg.1__2124__AT1G14830.1 1430 0.0
> Ahg920383 jgi|Araly1|920383|scaffold_101664.1
Length=1885
Score = 3206 bits (1736), Expect = 0.0
Identities = 1837/1887 (97%), Gaps = 2/1887 (0%)
Strand=Plus/Plus
Query 181 TGTGATACGTTCCAGGAAACATGGCGACGATGAAAAGTTTGATAGGTCTGATAAACAAAA 240
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1 TGTGATACTTTCCAGGAAACATGGCGACGATGAAAAGTTTGATAGGTCTGATTAACAAAA 60
Query 241 TCCAGAGGGCGTGTACTGTCCTCGGAGATCATGGCGGTGAAGGAATGTCGCTTTGGGAAG 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCCAGAGGGCTTGTACTGTCCTCGGAGATCATGGCGGTGAAGGAATGTCGCTTTGGGAAG 120
Query 301 CTCTCCCAACCGTCGCTGTCGTTGGTGGCCAGAGTTCCGGAAAATCTTCAGTTCTAGAAA 360
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CTCTACCAACCGTCGCTGTTGTTGGTGGCCAGAGTTCCGGAAAATCTTCAGTTCTAGAAA 180
Query 361 GTGTTGTGGGAAGAGATTTTCTGCCTCGTGGATCTGGTATCGTTACAAGGAGGCCATTGG 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 181 GTGTTGTGGGAAGAGATTTTCTGCCTCGTGGATCTGGTATCGTTACTAGGAGGCCATTGG 240
Query 421 TGTTGCAACTTCATAAGACTGAAGACGGGACAACTGAGTACGCTGAGTTTCTTCATGCTC 480
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 241 TGTTGCAGCTTCATAAGACTGAAGAAGGGACAACTGAGTACGCTGAGTTTCTTCATGCTC 300
Query 481 CTAAGAAGAGATTTGCTGATTTTGCTGCTGTGCGGAAAGAAATTGAGGATGAAACTGATC 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 301 CTAAGAAGAGATTTGCTGATTTTGCTGCTGTGCGGAAGGAAATTGAGGATGAAACTGATC 360
Query 541 GTATTACTGGGAAGTCAAAACAAATCTCAAACATTCCAATTCAGCTGAGCATATATTCTC 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GTATTACTGGGAAGTCTAAACAAATCTCAAACATTCCAATTCAGCTGAGCATATATTCTC 420
Query 601 CTAATGTTGTTAATCTGACGCTCATAGATCTTCCGGGTTTGACCAAGGTCGCTGTAGATG 660
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 421 CTAATGTTGTTAATCTGACGCTCATAGATCTTCCGGGTTTGACGAAGGTTGCTGTAGAGG 480
Query 661 GACAACCGGAAAGTATTGTCCAAGACATTGAAAATATGGTCCGGTCTTATGTTGAAAAGC 720
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 481 GACAACCGGATAGTATTGTCCAAGACATTGAAAATATGGTCCGCTCTTATGTTGAAAAGC 540
Query 721 CAAATTGCATCATATTGGCTATTTCTCCAGCAAATCAAGATATTGCTACCTCAGATGCTA 780
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 541 CAAATTGCATCATATTGGCTATTTCTCCAGCAAATCAAGATATTGCTACCTCGGACGCTA 600
Query 781 TAAAACTTGCTAGAGAAGTTGATCCTACAGGCGAAAGGACTTTTGGTGTTGCAACCAAGC 840
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 601 TAAAACTTGCTAGAGAAGTTGATCCTACAGGCGAAAGGACTTTTGGAGTTGCAACCAAGC 660
Query 841 TTGATATCATGGATAAAGGAACAGATTGTCTAGATGTTCTTGAGGGAAGGTCATACCGTT 900
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 661 TTGATATCATGGATAAAGGAACAGATTGTCTAGACGTTCTTGAGGGAAGGTCGTACCGTT 720
Query 901 TGCAACATCCCTGGGTTGGAATTGTGAATCGTTCACAAGCTGATATTAATAAGAGAGTCG 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 721 TGCAACATCCCTGGGTTGGAATTGTGAATCGTTCACAAGCTGATATTAATAAGAGGGTCG 780
Query 961 ATATGATTGCTGCACGTAGAAAAGAGCAAGAATATTTTGAAACAAGCCCTGAATACGGGC 1020
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 781 ATATGATTGCTGCACGTAGAAAAGAGCGAGAATATTTTGAAACAAGCCCTGAATACGGGC 840
Query 1021 ACTTAGCCAGTAGAATGGGATCAGAATATCTAGCAAAACTCTTGTCTCAGCACTTAGAGA 1080
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 ACTTAGCTAGTAGAATGGGATCAGAATATCTAGCAAAACTCTTGTCTCAGCACTTAGAGA 900
Query 1081 CTGTTATCAGGCAGAAAATCCCCAGTATTGTTGCTTTGATCAACAAAAGCATCGATGAGA 1140
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 901 CTGTTATCAGGCAGAAAATACCCAGTATTGTTGCTTTGATCAACAAAAGCATCGATGAGA 960
Query 1141 TAAATGCAGAACTTGATAGGATTGGGAGACCCATTGCAGTAGATTCAGGAGCCCAACTTT 1200
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 961 TAAATGCAGAGCTGGATAGGATTGGGAGACCCATTGCAGTAGATTCAGGAGCCCAACTCT 1020
Query 1201 ACACAATTTTGGAACTCTGCCGGGCATTTGATCGTGTCTTTAAGGAGCACTTGGATGGAG 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 ACACAATTTTGGAACTCTGCCGGGCATTTGATCGTGTCTTTAAGGAGCACTTGGATGGAG 1080
Query 1261 GACGACCTGGTGGAGACCGAATTTATGGAGTTTTCGACCATCAATTACCAGCAGCCTTAA 1320
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 1081 GACGACCTGGTGGAGACCGGATTTATGGAGTTTTTGACCATCAATTACCAGCAGCCTTAA 1140
Query 1321 AGAAACTTCCCTTTGATCGACATCTGTCTACCAAAAATGTTCAGAAGGTTGTTTCAGAAG 1380
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1141 AGAAACTTCCCTTTGATCGACATCTCTCTACCAAAAATGTTCAGAAGGTTGTTTCAGAAG 1200
Query 1381 CAGATGGTTATCAGCCGCATCTTATTGCTCCTGAACAAGGATACAGAAGGCTCATTGATG 1440
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 CTGATGGTTATCAGCCGCATCTTATTGCTCCTGAACAAGGATACAGAAGGCTCATTGATG 1260
Query 1441 GATCCATAAGCTATTTCAAAGGACCAGCTGAAGCCACTGTCGATGCAGTGCATTTCGTAT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 GATCCATAAGCTATTTCAAAGGACCAGCTGAAGCCACTGTCGATGCAGTGCATTTCGTAT 1320
Query 1501 TGAAGGAGCTGGTCAGAAAGTCAATTTCAGAAACAGAGGAACTGAAGCGTTTCCCGACTC 1560
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct 1321 TGAAGGAGCTGGTCAGAAAGTCCATTTCAGAAACAGAGGAACTGAAGCGATTCCCTACTC 1380
Query 1561 TAGCAAGCGATATAGCAGCTGCTGCAAATGAAGCTCTTGAAAGATTCAGAGACGAAAGCA 1620
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1381 TAGCAAGCGATATAGCAGCTGCTGCAAATGAAGCTCTCGAAAGATTCAGAGATGAAAGCA 1440
Query 1621 GGAAAACGGTTTTGCGTCTGGTGGATATGGAATCTAGCTACCTCACGGTTGAGTTCTTCA 1680
||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1441 GGAAAACGGTTCTACGTCTGGTGGATATGGAATCCAGCTACCTCACGGTTGAGTTCTTCA 1500
Query 1681 GGAAACTCCATCTTGAACCCGAGAAAGAGAAACCAAACCCAAGGAATGCCCCAGCACCAA 1740
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 GGAAACTGCATCTTGAACCCGAGAAAGAGAAACCAAACCCAAGGAATGCCCCAGCACCAA 1560
Query 1741 ACGCAGACCCCTACTCCGATAATCACTTCAGAAAGATCGGATCCAACGTGAGTGCATACA 1800
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1561 ACGCAGACCCCTACTCCGATAATCACTTCAGAAAGATTGGATCCAACGTGAGTGCATACA 1620
Query 1801 TAAACATGGTCTGCGACACATTGAGAAACTCTCTTCCCAAAGCTGTCGTTTACTGCCAAG 1860
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1621 TAAACATGGTCTGCGACACATTGAGAAACTCACTTCCCAAAGCTGTCGTTTACTGCCAAG 1680
Query 1861 TTAGAGAAGCTAAGAGATCGCTTCTCAACTTCTTCTACGCTCAAGTTGGCAGGAAAGAGA 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681 TTAGAGAAGCTAAGAGATCGCTTCTCAACTTCTTCTACGCTCAAGTTGGCAGGAAAGAGA 1740
Query 1921 AGGAGAAGCTGGGTGCTATGTTGGACGAAGACCCACAGCTGATGGAACGAAGAGGAACCT 1980
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1741 AGGAGAAGCTGGGTGCGATGTTGGACGAAGACCCACAGCTGATGGAACGAAGAGGAACCT 1800
Query 1981 TAGCTAAACGGCTAGAGCTTTACAAACAAGCTAGAGACGACATCGATGCAGTGGCTTGGA 2040
||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1801 TAGCTAAACGGCTCGAGCTTTACAAACAAGCTAGAGATGACATCGATGCTGTGGCTTGGA 1860
Query 2041 AGTAAGGGGGTTTGCTAAGACATATTC 2067
||||||| |||||||||| ||||||
Sbjct 1861 AGTAAGGA--TTTGCTAAGAAATATTC 1885
> Ahg472170 jgi|Araly1|472170|fgenesh2_kg.1__2124__AT1G14830.1
Length=2084
Score = 1430 bits (774), Expect = 0.0
Identities = 913/976 (94%), Gaps = 26/976 (3%)
Strand=Plus/Plus
Query 1 GTTTTTCCCATTACCGTTCTCTGCTCCATTGGGTTCTTTCCTCTTTTCTCCCAGATTCAT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTTTTTCCCATTACCGTTCTCTGCTCCATTGGGTTCTTTCCTCTTTTCTCCCAGATTCAT 60
Query 61 CAATCCCTCCTGCTACCGCGAGAGAGTAACAACTCACCGGACGTTTCAAATCCATCCTCC 120
|||| || || ||||||| | ||| | || | || ||| | | | ||
Sbjct 61 CAAT--CT-CTCCTACCGC-CGCGAG---------A---GA-G-TT-AAAAAC-T-CACC 99
Query 121 GATAACTATATTC-GTTTCGTTAGATCTAGATCTGAGCGTCGGTGAGAGATTTTCTGGAT 179
| || | ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 100 G--GAC-GT-TTCAAATTCGTTAGATCTAGATCTGAGCGTCGGTGAGAGATTTTCTGGAT 155
Query 180 CTGTGATACGTTCCAGGAAACATGGCGACGATGAAAAGTTTGATAGGTCTGATAAACAAA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 156 CTGTGATACGTTCCAGGAAACATGGCGACGATGAAAAGTTTGATAGGTCTGATAAACAAA 215
Query 240 ATCCAGAGGGCGTGTACTGTCCTCGGAGATCATGGCGGTGAAGGAATGTCGCTTTGGGAA 299
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 216 ATCCAGAGGGCTTGTACTGTCCTCGGAGATCATGGTGGTGAAGGAATGTCGCTTTGGGAA 275
Query 300 GCTCTCCCAACCGTCGCTGTCGTTGGTGGCCAGAGTTCCGGAAAATCTTCAGTTCTAGAA 359
|||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||
Sbjct 276 GCTCTCCCAACCGTCGCTATCGTTGGTGGCCAGAGCTCCGGAAAATCTTTAGTTCTAGAA 335
Query 360 AGTGTTGTGGGAAGAGATTTTCTGCCTCGTGGATCTGGTATCGTTACAAGGAGGCCATTG 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 AGTGTTGTGGGAAGAGATTTTCTGCCTCGTGGATCTGGTATCGTTACAAGGAGGCCATTG 395
Query 420 GTGTTGCAACTTCATAAGACTGAAGACGGGACAACTGAGTACGCTGAGTTTCTTCATGCT 479
|||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||
Sbjct 396 GTGTTGCAGCTTCATAAGACTGAAGAAGGGACAACGGAGGACGCTGAGTTTCTTCATGCT 455
Query 480 CCTAAGAAGAGATTTGCTGATTTTGCTGCTGTGCGGAAAGAAATTGAGGATGAAACTGAT 539
|| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 456 CCGAAGAAGAGATTTGCTGATTTTGCTGCTGTGCGGAAGGAAATTGAGGACGAAACTGAT 515
Query 540 CGTATTACTGGGAAGTCAAAACAAATCTCAAACATTCCAATTCAGCTGAGCATATATTCT 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 CGTATTACTGGGAAGTCAAAACAAATCTCAAACATTCCAATTCAGCTGAGCATATATTCT 575
Query 600 CCTAATGTTGTTAATCTGACGCTCATAGATCTTCCGGGTTTGACCAAGGTCGCTGTAGAT 659
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 576 CCTAATGTTGTTAATCTGACGCTCATAGATCTTCCGGGTTTGACCAAGGTTGCTGTAGAT 635
Query 660 GGACAACCGGAAAGTATTGTCCAAGACATTGAAAATATGGTCCGGTCTTATGTTGAAAAG 719
||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 636 GGACAACCGGATAGTATTGTCCAAGACATTGAATATATGGTCCGCTCTTATGTTGAAAAG 695
Query 720 CCAAATTGCATCATATTGGCTATTTCTCCAGCAAATCAAGATATTGCTACCTCAGATGCT 779
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct 696 CCAAATTGCATCATATTGGCTATTTCTCCAGCTAATCAAGATATTGCCACCTCAGACGCT 755
Query 780 ATAAAACTTGCTAGAGAAGTTGATCCTACAGGCGAAAGGACTTTTGGTGTTGCAACCAAG 839
||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||||||
Sbjct 756 ATAAAACTTGCTAGAGAAGTTGATCCTACAGGCAAAAGAACTTTTCGAGTTGCAACCAAG 815
Query 840 CTTGATATCATGGATAAAGGAACAGATTGTCTAGATGTTCTTGAGGGAAGGTCATACCGT 899
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 816 CTTGGTATCATGGATAAAGGAACAGATTGTCTAGATGTTCTTGAGGGAAGGTCGTACCGT 875
Query 900 TTGCAACATCCCTGGGTTGGAATTGTGAATCGTTCACAAGCTGATATTAATAAGAGAGTC 959
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 876 TTGCAACATCCCTGGGTTGGAATTGTGAGTCGTTCACAAGCTGATATTAATAAGAGGGTC 935
Query 960 GATATGATTGCTGCAC 975
||||||||||||||||
Sbjct 936 GATATGATTGCTGCAC 951
Score = 870 bits (471), Expect = 0.0
Identities = 557/596 (93%), Gaps = 15/596 (3%)
Strand=Plus/Plus
Query 1694 TGAACCCGAGAAAGAGAAACCAAACCCAAGGAA-TGCCCCAGCACCAAACGCAGACCCCT 1752
||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||||||
Sbjct 1502 TGAACCCGAGAAAGAGAAACCAAACCCAA-GAATTGCCTCACCACCAAACGCAGACCCCT 1560
Query 1753 ACTCCGATAATCACTTCAGAAAGATCGGATCCAACGTGAGTGCATACATAAACATGGTCT 1812
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1561 ACTCCGATAACCACTTCAGAAAGATCGGATCCAACGTGAGTGCATACACAAACATGGTCT 1620
Query 1813 GCGACACATTGAGAAACTCTCTTCCCAAAGCTGTCGTTTACTGCCAAGTTAGAGAAGCTA 1872
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1621 GCGACACATTGAGAAACTCTCTTCCTAAAGCTGTCGTTTACTGCCAAGTTAGAGAAGCTA 1680
Query 1873 AGAGATCGCTTCTCAACTTCTTCTACGCTCAAGTTGGCAGGAAAGAGAAGGAGAAGCTGG 1932
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681 AGAGATCGCTGCTCAACTTCTTCTACGCTCAAGTTGGCAGGAAAGAGAAGGAGAAGCTGG 1740
Query 1933 GTGCT-ATGTTGGACGAAGACCCACAGCTGATGGAACGAAGAGGAACCTTAGCTAAACGG 1991
||| | ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 1741 GTG-TGATGTTGGACGAAGACCCACAGCTGATGGAACAAAGAGGAACATTAGCTAAACGG 1799
Query 1992 CTAGAGCTTTACAAACAAGCTAGAGACGACATCGATGCAGTGGCTTGGAAGTAAGGGGGT 2051
|| |||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
Sbjct 1800 CTCGAGCTTTACAAACAAGATAGAGACGACATCGATGCTGTGGCTTGGAAGTAAGGG--T 1857
Query 2052 TTGCTAAGACATATTCTTTATATTGTTAATTTCTTTGTTCGTGTGGGCACACTGCATTAT 2111
||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1858 TTGCTAAGAAATATTCTTTATATTGTTAATTTCTTTGTTCGTGTGGGGAC--TGCATTAT 1915
Query 2112 AATAGATATGTTTGGAGTTCTAACTTCCAGTCTACACAAACATACACGCGACTACTCATG 2171
|||||||||||| |||||||||||||||| || ||||||||| |||||||| ||||||||
Sbjct 1916 AATAGATATGTTGGGAGTTCTAACTTCCAATCCACACAAACACACACGCGATTACTCATG 1975
Query 2172 TTTTCTTGGGTCGCTAATTTCTATCACAACTTTCCCACttttttttGGTGTGTATCTTCG 2231
||||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||| |
Sbjct 1976 TTTTCTTCGGTCGCTAATTGCTATCACAACTTTCCCACTTTTTTT-GGTGT--ATC---G 2029
Query 2232 ATTCTTGAATACTGGTTTTTAGAACAGTTAAGACATATTTTGAAGTCGCACTCTTT 2287
||||||| ||||||||||| ||||||||| ||||||||||||| |||||| |||||
Sbjct 2030 ATTCTTGGATACTGGTTTT-AGAACAGTTGAGACATATTTTGATGTCGCATTCTTT 2084
Score = 638 bits (345), Expect = 0.0
Identities = 464/514 (90%), Gaps = 37/514 (7%)
Strand=Plus/Plus
Query 1048 ATCTAGCAAAACTCTTGTCTCAGCACTTAGAGACTGTTATCAGGCAGAAAATCCCCAGTA 1107
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 955 ATCTAGCAAAACTCTTGTCTCAGCACTTAGAGACTGTTATCGGGCAGAAAATACCCAGTA 1014
Query 1108 TTGTTGCTTTGATCAACAAAAGCATCGATGAGATAAATGCAGAACTTGATAGGATTGGGA 1167
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 1015 TTGTTGCTTTGATCAACAAAAGCATCGATGAGATAAATGCAGAGCTGGATAGGATTGGGA 1074
Query 1168 GACCCATTGC---AG--T-A-G---A-T-TC-----A-G----GA-GCCCAACTTTACAC 1204
|| ||||||| || | | | | | || | | | |||||||| |||||
Sbjct 1075 GATCCATTGCAGTAGACTCAGGATCACTCTCTAATTATGATTCCAGGCCCAACTCTACAC 1134
Query 1205 AATTTTGGAACTCTGCCGGGCATTTGATCGTGTCTTTAAGGAGCACTTGGATGGAGGACG 1264
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |
Sbjct 1135 AATTTTGGAACTCTGCCGGGCATTTGATTGTGTCTTTAAGGAGCACTTGGATGGA-G--G 1191
Query 1265 ACCTGGTGGAGACCGAATTTATGGAGTTTTCGACCATCAATTACCAGCAGCCTTAAAGAA 1324
||| | | ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1192 ACC-------G---G-ATTTATGGAGTTTTCGACCATCAATTACCAGCAGCCTTAAATAA 1240
Query 1325 ACTTCCCTTTGATCGACATCTGTCTACCAAAAATGTTCAGAAGGTTGTTTCAGAAGCAGA 1384
||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct 1241 ACTTCCCTTTGATCGACATCTCTCGACCAAAAATGTTCAGAAGGTTGTTTCAGAAGCTGA 1300
Query 1385 TGGTTATCAGCCGCATCTTATTGCTCCTGAACAAGGATACAGAAGGCTCATTGATGGATC 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1301 TGGTTATCAGCCGCATCTTATTGCTCCTGAACAAGGATACAGAAGGCTCATTGATGGATC 1360
Query 1445 CATAAGCTATTTCAAAGGACCAGCTGAAGCCACTGTCGATGCAGTGCATTTCGTATTGAA 1504
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1361 CATAAGCTATTTCAAAGGATCAGCTGAAGCCACTGTCGATGCAGTGCATTTCGTATTGAA 1420
Query 1505 GGAGCTGGTCAGAAAGTCAATTTCAGAAACAGAG 1538
||||||||||||||||||||||||||||||||||
Sbjct 1421 GGAGCTGGTCAGAAAGTCAATTTCAGAAACAGAG 1454
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87493292765
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5