BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G15460.1
Length=2352
Score E
Sequences producing significant alignments: (Bits) Value
Ahg334832 jgi|Araly1|334832|fgenesh1_pg.C_scaffold_1001397 3308 0.0
Ahg316416 jgi|Araly1|316416|fgenesh1_pm.C_scaffold_2001449 1242 0.0
> Ahg334832 jgi|Araly1|334832|fgenesh1_pg.C_scaffold_1001397
Length=2052
Score = 3308 bits (1791), Expect = 0.0
Identities = 1966/2053 (96%), Gaps = 2/2053 (0%)
Strand=Plus/Plus
Query 106 ATGGAGGAAGAAAGAGTGGATAGCTCGAAGAGGCTATTCAGAGGTATAGTAGCAGATCTT 165
||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1 ATGGAGGAAGAAAGACTGGATAGCTCGAAGAGGCTATTTAGAGGTATCGTAGCAGATCTT 60
Query 166 AGAGGAAGAGCCTTGTGTTACAAGGAAGACTGGGTCGCTGGTCTCCGTTCTGGTTTCGGG 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGAGGAAGAGCCTTGTGTTACAAGGAAGACTGGGTCGCTGGTCTCCGTTCTGGTTTCGGG 120
Query 226 ATTTTAGCACCCACAACATATAtttttttCGCTTCCGCTCTTCCGGTTATCGCCTTTGGG 285
|||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 121 ATTTTAGCTCCCACAACATATATTTTTTTCGCTTCTGCGCTTCCGGTTATCGCCTTTGGC 180
Query 286 GAGCAACTCAGCCGCGACACAGAGGGAGCGTTGAGCACAGTAGAAACGTTAGCATCAACA 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GAGCAACTCAGCCGCGACACAGAGGGAGCGTTGAGCACAGTAGAAACGTTAGCATCAACA 240
Query 346 GCGTTATGTGGAGTAATACACTCAATATTGGGAGGACAACCACTGTTGATACTTGGAGTT 405
|||||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||
Sbjct 241 GCGTTATGTGGAGTGATACACTCAATTTTGGGAGGGCAACCATTGTTGATACTTGGAGTT 300
Query 406 GCAGAACCAACTGTCTTAATGTACGTTTACTTGTACAACTTCGCTATAGGAAGACCAGAA 465
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GCAGAACCAACTGTGTTAATGTACGTTTACTTGTACAACTTCGCTATAGGAAGACCAGAA 360
Query 466 TTAGGCAAACAACTCTACTTAGCTTGGGCTGCTTGGGTTTGTGTGTGGACGGCTCTGTTA 525
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TTGGGCAAACAACTCTACTTAGCTTGGGCTGCTTGGGTTTGTGTGTGGACGGCTCTGTTA 420
Query 526 CTGTTCGTAATGGCAATCCTCAATACGGCTGATATCATTAACCGGTTTACGAGGGTTGCT 585
|||||| | ||||| ||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 421 CTGTTCCTTATGGCGATCCTTAATGCGGCTGATATCATTAACCGGTTTACGAGGGTTGCT 480
Query 586 GGTGAGCTGTTTGGTATGTTGATCTCCGTTCTGTTCATTCAACAAGCCATTAAGGGTATG 645
||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 481 GGTGAGCTGTTCGGTATGTTGATATCCGTTCTGTTCATCCAACAAGCCATTAAGGGTATG 540
Query 646 GTGAGTGAGTTTGGGATGCCAAAAGATGAGGACTCAAAACTAGAAAAGTATAAGTTTGAG 705
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 541 GTGAGTGAATTTGGGATGCCAAAAGATGAGGACTCAAAACTAGAAAAGTATAGGTTTGAG 600
Query 706 TGGCTCTATACAAACGGACTTCTCGGCCTCATTTTCACCTTTGGCCTTCTCTACACCGCT 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TGGCTCTATACAAACGGACTTCTCGGCCTCATTTTCACCTTTGGCCTTCTCTACACCGCT 660
Query 766 TTGAAGAGTCGAAAAGCAAGGTCTTGGCGATACGGAACAGGATGGTACAGAAGCTTCATC 825
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TTGAAGAGTCGAAAAGCAAGGTCTTGGCGATACGGAACAGGATGGTACAGAAGCTTCATT 720
Query 826 GCAGACTATGGAGTTCCTTTGATGGTTGTGGTTTGGACAGCATTGTCTTTTAGTACACCA 885
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 721 GCAGACTATGGAGTTCCTTTGATGGTTGTGGTTTGGACAGCATTGTCTTTTAGTACGCCA 780
Query 886 TCAAAACTCCCCTCTGGTGTCCCGAGAAGACTCTTTAGTCCTTTACCATGGGACTCTCCT 945
||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||
Sbjct 781 TCAAAACTCCCCTCTGGTGTCCCAAGAAGACTCTTTAGTCCTCTGCCATGGGACTCTGCT 840
Query 946 TCTTTATCACATTGGACTGTCATCAAGGACATGGGAAAAGTCTCTCCGGGTTACATATTT 1005
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 841 TCTTTATCACATTGGACTGTCATCAAGGACATGGGGGAAGTCTCTCCGGGTTACATATTC 900
Query 1006 GCGGCATTTATACCCGCATTGATGATCGCAGGGCTTTACTTCTTTGACCACAGCGTTGCC 1065
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 901 GCGGCATTTATACCCGCATTGATGATAGCAGGGCTCTACTTCTTTGACCACAGCGTTGCC 960
Query 1066 TCGCAGCTCGCTCAGCAGAAGGAGTTCAACCTCAAGAAGCCTTCAGCGTATCACTATGAC 1125
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 961 TCGCAGCTCGCTCAACAGAAGGAGTTCAACCTCAAGAAGCCTTCGGCGTATCACTATGAC 1020
Query 1126 ATTCTCTTGTTGGGTTTCATGACGTTGATATGTGGATTGCTAGGTCTGCCTCCTTCAAAT 1185
|||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 1021 ATTCTCCTGTTGGGTTTCATGACGTTGATCTGTGGATTGCTCGGTCTGCCTCCTTCCAAC 1080
Query 1186 GGAGTCCTCCCTCAGTCTCCTATGCATACCAAAAGCCTTGCTGTTCTTAAACGACAGTTG 1245
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 GGAGTCCTTCCTCAGTCTCCTATGCATACCAAAAGCCTTGCTGTTCTTAAACGACAGTTG 1140
Query 1246 ATCCGGAGGAAGATGGTAAAGACAGCCAAAGAAAGCATCAGGAAGAGAGAAACATCCTCA 1305
||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||
Sbjct 1141 ATCCGGAGGAAGATGGTAAAGTCGGCCAAAGAAAGCATCAGGAAGAGAGAAACTTCCTCA 1200
Query 1306 CAAGTGTACGAGAATATGCAAGAAGTCTTCATAGAAATGGATAAAAGTCCA-CTTGCTCA 1364
||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||
Sbjct 1201 CAAGTGTACGAGAATATGCAAGAAGTCTTCATAGAAATGGACAAAAGTC-ATCTTGCTCA 1259
Query 1365 GACAGATCCATCAGTGATAATTGAGCTTCAAGATCTGAAAGAAGCAGTAATGAAGAGCAA 1424
|||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1260 GACAGATCTAGCAGTGATAATTGAGCTGCAAGATCTGAAAGAAGCAGTAATGAAGAGCAA 1319
Query 1425 TGATGAAGAAAGAGAGGGAGACGAGGAGAGTGGTTTTGATCCAGAGAAGCACCTTGACGC 1484
||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1320 TGAGGAAGAAGGAGAGGGAGACAAGGAGAGTGGTTTTGATCCAGAGAAGCACCTTGACGC 1379
Query 1485 TTACTTGCCTGTTCGAGTCAACGAGCAGAGAGTTAGCAACTTGTTGCAGTCACTGCTTGT 1544
||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1380 TTATTTGCCTGTTAGAGTCAACGAGCAGAGAGTGAGCAACTTGTTGCAGTCACTGCTGGT 1439
Query 1545 GGCAGGTGCAGTGTTGGCTATGCCGGCCATTAAGCTCATACCGACTTCCATTCTATGGGG 1604
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1440 GGCAGGTGCAGTGTTGGCAATGCCGGCCATTAAGCTCATACCTACTTCCATTCTATGGGG 1499
Query 1605 ATACTTTGCTTACATGGCCATCGACAGCCTCCCGGGAAATCAATTCTTCGAACGCTTAAC 1664
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 1500 ATACTTCGCTTACATGGCCATCGATAGCCTCCCGGGAAATCAATTCTTCGAACGCACAAT 1559
Query 1665 GCTTCTCTTCGTTCCAACAAGCCGGAGATTCAAGGTCTTGGAGGGAGCACACGCGTCGTT 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 GCTTCTCTTCGTTCCAACAAGCCGGAGATTCAAGGTCTTGGAGGGAGCACACGCGTCGTT 1619
Query 1725 CGTGGAGAAAGTTCCTTACAAGTCAATGGCTGCGTTCACACTGTTGCAGATATTCTACTT 1784
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 CGTGGAGAAAGTTCCGTACAAGTCAATGGCTGCGTTCACACTGTTGCAGATATTCTACTT 1679
Query 1785 TGGGCTGTGCTATGGGGTGACGTGGATTCCGGTGGCTGGAATCATGTTTCCGGTTCCTTT 1844
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1680 TGGGCTGTGCTATGGAGTGACGTGGATTCCGGTGGCTGGAATCATGTTTCCTGTTCCTTT 1739
Query 1845 CTTCCTCTTAATAGCTATCAGACAGTACATTCTCCCGAAGCTCTTTAACCCGGCCCATCT 1904
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1740 CTTCCTCTTAATAGCTATCAGACAGTACATTCTCCCGAAGCTCTTTAACCAGGCCCATCT 1799
Query 1905 CCGAGAACTCGATGCCGCTGAGTACGAGGAAATCCCCGGTACTCCGAGAAACCCGCTGGA 1964
|||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||
Sbjct 1800 GCGAGAACTTGATGCCGCTGAGTACGAAGAAATCCCCGGCACTCCTAGAAACCCGCTCGA 1859
Query 1965 ACTGTCTTTCCGGTCGAATGACTCGAAGAGAGGCGTCCAAGAAGGCGATGCTGAGATTTT 2024
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1860 ACTGTCTTTCCGGTCGAATGACTCGAAGAGAGGTGTCCAAGAAGGGGATGCTGAGATTTT 1919
Query 2025 AGACGAGTTAACGACAAGCAGAGGCGAGCTTAAAGTCCGTACATTGAATCTTAACGAAGA 2084
||||||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||
Sbjct 1920 AGACGAGTTAACGACAAGCAGAGGCGAGCTTAAAGTCCGCACAGTCAGTCTTAACGAAGA 1979
Query 2085 CAAAGGCAACCAGATTTATCCCAAGGAGAAAGTAAAAGCAGGAGACGGGGACATGAGCAC 2144
|| ||||||||||||||| |||||| ||| |||||| |||||||||||||||||||||||
Sbjct 1980 CAGAGGCAACCAGATTTACCCCAAGAAGACAGTAAATGCAGGAGACGGGGACATGAGCAC 2039
Query 2145 GACAAGGGAGTGA 2157
|||||| ||||||
Sbjct 2040 GACAAGAGAGTGA 2052
> Ahg316416 jgi|Araly1|316416|fgenesh1_pm.C_scaffold_2001449
Length=1887
Score = 1242 bits (672), Expect = 0.0
Identities = 1094/1291 (85%), Gaps = 56/1291 (4%)
Strand=Plus/Plus
Query 883 CCATCAAAACTCCCCTCTGGTGTCCCGAGAAGACTCTTTAGTCCT-TTACCATGGGACTC 941
||||||||||| |||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct 637 CCATCAAAACTACCCTCTGGTGTCCCGAGAAGACTCGTTAGTCCTCTT-CCATGGGACTC 695
Query 942 TCCTTCTTTATCACATTGGACTGTCATCAAGGACATGGGAAAAGTCTCTCCGGGTTACAT 1001
| ||||||| ||||||||||||||| | ||||||||||||| |||||
Sbjct 696 TGTTTCTTTAAAACATTGGACTGTCAT------C-------AAGTCTCTCCGGGATACAT 742
Query 1002 ATTTGC-GGCATTTATACCCGCATTGATGATCGCAGGGCTTTACTTCTTTGACCACAGCG 1060
|||||| ||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 743 ATTTGCGGGCGTTTATACCCGCATTGATGATCGCAGGTCTCTACTTCTTTGACCACAGCG 802
Query 1061 TTGCCTCGCAGCTCGCTCAGCAGAAGGAGTTCAACCTCAAGAAGCCTTCAGCGTATCACT 1120
||| |||||||||||| |||||| ||||||||||||||||||| ||||| || |||||||
Sbjct 803 TTGTCTCGCAGCTCGCGCAGCAGGAGGAGTTCAACCTCAAGAACCCTTCTGCTTATCACT 862
Query 1121 ATGACATTCTCTTGTTGGGTTTCATGACGTTGATATGTGGATTGCTAGGTCTGCCTCCTT 1180
| |||||||||||||| ||||||||| |||||| ||||||||||| |||||||| ||||
Sbjct 863 ACGACATTCTCTTGTTAGGTTTCATGGTGTTGATCTGTGGATTGCTCGGTCTGCCGCCTT 922
Query 1181 CAAATGGAGTCCTCCCTCAGTCTCCTATGCATACCAAAAGCCTTGCTGTTCTTAAACGAC 1240
| || ||||||||||| ||||||||||||||||||||||||||||||||| || || ||
Sbjct 923 CCAACGGAGTCCTCCCGCAGTCTCCTATGCATACCAAAAGCCTTGCTGTT-TTCAA--AC 979
Query 1241 AGTTGATCCGGAGGAAGATGGTAAAGACAGCCAAAGAAAGCATCAGGA-AGAGAGAAACA 1299
|| | | ||||||||||| |||||||||||||||||||| || |||||| |||
Sbjct 980 ----GA--C--A-GAAGATGGTAATGACAGCCAAAGAAAGCATCA-GACAGAGAGCAACG 1029
Query 1300 TCCTCACAAGTGTACGAGAATATGCAAGAAGTCTTCATAGAAATGGATAAAAGTCCACTT 1359
|| || |||||||||||| |||||||| |||||||||| |||||||| ||||| ||||||
Sbjct 1030 TCTTCCCAAGTGTACGAGGATATGCAACAAGTCTTCATCGAAATGGACAAAAGCCCACTT 1089
Query 1360 GCTCAGACAGATC-CATCAGTGATAATTGAGCTTCAAGATCTGAAAGAAGCAGT-A--AT 1415
||| ||||| | | || || |||||| |||||| |||||||||||||| ||||| | |
Sbjct 1090 GCTGAGACACA-CACAACACTGATAAATGAGCTGCAAGATCTGAAAGAGGCAGTGATGAA 1148
Query 1416 GAAGAGC---AATGATGAAGAAAGAGAGGGAGACGAGGAGAGTGGTTTTGATCCAGAGAA 1472
||||||| || |||| || | | |||||| ||||||||||| |||||||||||
Sbjct 1149 GAAGAGCGAAAACGATG--GATATA-CCGGAGAC---GAGAGTGGTTTCGATCCAGAGAA 1202
Query 1473 GCACCTTGACGCTTACTTGCCTGTTCGAGTCAACGAGCAGAGAGTTAGCAACTTGTTGCA 1532
||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 1203 GCATGTTGACGCTTACTTGCCTGTTCGAGTCAACGAGCAGAGAGTAAGCAACCTGTTGCA 1262
Query 1533 GTCACTGCTTGTGGCAGGTGCAGTGTTGGCTATGCCGGCCATTAAGCTCATACCGACTTC 1592
|||||||| ||| |||||||||||| ||||| |||||||||||||||||||| || ||
Sbjct 1263 ATCACTGCTAGTGATAGGTGCAGTGTTTGCTATACCGGCCATTAAGCTCATACCTACCTC 1322
Query 1593 -CATTCTATGGGGATACTTT-GCTTACATGGCCATCGACAGCCTCCCGGGA-AATCAATT 1649
| ||||||||||||| ||| ||||||||||| |||||||| ||||| | | || |||||
Sbjct 1323 AC-TTCTATGGGGATA-TTTCGCTTACATGGCTATCGACAGTCTCCCAG-ACAACCAATT 1379
Query 1650 CTTCGAACGCTTAACGCTTCTCTTCGTTCCAACAAGCCGGAGATTCAAGGTCTTGGAGGG 1709
|||||||||| | ||||||||||| ||| ||||||||||||| ||||||||||||||
Sbjct 1380 CTTCGAACGCACAGTACTTCTCTTCGTCCCACCAAGCCGGAGATTTAAGGTCTTGGAGGG 1439
Query 1710 AGCACACGCGTCGTTCGTGGAGAAAGTTCCTTACAAGTCAATGGCTGCGTTCACACTGTT 1769
||| || || |||||| |||| |||||||| || |||||| ||||||| |||||| ||||
Sbjct 1440 AGCGCATGCATCGTTCCTGGAAAAAGTTCCATATAAGTCAGTGGCTGCATTCACATTGTT 1499
Query 1770 GCAGATATTCTACTTTGGGCTGTGCTATGGGGTGACGTGGATTCCGGTGGCTGGAATCAT 1829
|||||| ||||||||||||| || || || |||||||||||||| ||||| | ||||||
Sbjct 1500 TCAGATACTCTACTTTGGGCTTTGTTACGGAGTGACGTGGATTCCAGTGGCCGAAATCAT 1559
Query 1830 GTTTCCGGTTCCTTTCTTCCTCTTAATAGCTATCAGACAGTACATTCTCCCGAAGCTCTT 1889
||||||||||| |||||||||| ||||||| ||||| |||||| |||| || ||||| ||
Sbjct 1560 GTTTCCGGTTCTTTTCTTCCTCCTAATAGCCATCAGGCAGTACCTTCTTCCTAAGCTGTT 1619
Query 1890 TAACCCGGCCCATCTCCGAGAACTCGATGCCGCTGAGTACGAGGAAATCCCCGGTACTCC 1949
||| | ||||||||||| |||||||||||||| ||||||||||| ||||| || |||||
Sbjct 1620 TAAACAAGCCCATCTCCGGGAACTCGATGCCGCGGAGTACGAGGAGATCCCTGGAACTCC 1679
Query 1950 GAGAAACCCGCTGGAACTGTCTTTCCGGTCGAATGACTCGA-AGAGAGGCGTCCAAGAAG 2008
||||||||||| |||||||||||| |||||| | ||||| | ||||||||||||| |
Sbjct 1680 TAGAAACCCGCTTGAACTGTCTTTCAGGTCGACTAACTCGGCAC-GAGGCGTCCAAGA-G 1737
Query 2009 -GCGATGCTGAGATTTTAGACGAGTTAACGACAAGCAGAGGCGAGCTTAAAGTCCGTACA 2067
| ||||| | |||| ||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1738 TGTGATGCGGGGATTCTAGACGAGTTAACAACGAGCAGAGGCGAGCTTAAAGTCCGTACG 1797
Query 2068 TT-GAATCTTAACGAAGACAAAGGCAACCAGATTTATCCCAAGGAGAAAGTAAAAGCAGG 2126
| | || |||||||||||||||| ||||||| || |||||||||| |||| ||| |||
Sbjct 1798 CTCGG-TCATAACGAAGACAAAGGCCACCAGATATACCCCAAGGAGATAGTAGAAGTAGG 1856
Query 2127 AGACGGGGACATGAGCACGACAAGGGAGTGA 2157
|| | ||||||||| || | || ||||||
Sbjct 1857 GGATGTGGACATGAGTACTTCCAGAGAGTGA 1887
Score = 529 bits (286), Expect = 4e-149
Identities = 405/463 (87%), Gaps = 6/463 (1%)
Strand=Plus/Plus
Query 383 AACCACTGTTGATACTTGGAGTTGCAGAACCAACTGTCTTAATGTACGTTTACTTGTACA 442
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 179 AACCACTGCTGATACTTGGAGTTGCAGAACCAACTGTCTTAATGTACAAATACTTGTTCG 238
Query 443 ACTTCGCTATAGGAAGACCAGAATTAG-GCAAACAACTCTACTTAGCTTGGGCTGCTTGG 501
||||||||| ||||| ||||||||| | | ||||| |||||||||||| ||| |||||||
Sbjct 239 ACTTCGCTAAAGGAAAACCAGAATT-GCGAAAACAGCTCTACTTAGCTAGGGTTGCTTGG 297
Query 502 GTTTGTGTGTGGACGGCTCTGTTACTGTTCGTAATGGCAATCCTCAATACGGCTGATATC 561
|||||||||||||||||| ||||||||||| ||||||| || || | |||| |||||
Sbjct 298 GTTTGTGTGTGGACGGCTTTGTTACTGTTCCTAATGGCGATATTCCACGTGGCTTATATC 357
Query 562 ATTAACCGGTTTACGAGGGTTGCTGGTGAGCTGTTTGGTATGTTGATCTCCGTTCTGTT- 620
|| |||||||| |||||| | ||||||||||||||||||||||||||||| ||||||||
Sbjct 358 ATCAACCGGTTCACGAGGATCGCTGGTGAGCTGTTTGGTATGTTGATCTCTGTTCTGTTT 417
Query 621 CATTCAACAAGCCATTAAGGGTATGGTGAGTGAGTTTGGGATGCCAAAAGATGAGGACTC 680
| | |||||| |||| ||| |||| |||| || ||| |||| ||||||| ||| |||||
Sbjct 418 C-TCCAACAAACCATAAAGAATATGTTGAGCGAATTTAGGATTCCAAAAGGTGAAGACTC 476
Query 681 AAAACTAGAAAAGTATAAGTTTGAGTGGCTCTATACAAACGGACTTCTCGGCCTCATTTT 740
|||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||||
Sbjct 477 AAAACTTGAAAAGTATCAGTTTGAGTGGCTCTACACAAACGGACTTCTCGGCCTTATTTT 536
Query 741 CACCTTTGGCCTTCTCTACACCGCTTTGAAGAGTC-GAAAAGCAAGGTCTTGGCGATACG 799
|||| | || ||| ||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 537 CACCGTCGGTCTTGTCTACACCGCTTTGAAGAG-CAGAAAAGCAAGGTCTTGGCGATACG 595
Query 800 GAACAGGATGGTACAGAAGCTTCATCGCAGACTATGGAGTTCC 842
|||||||||||| | |||||||| | |||||||| ||||||||
Sbjct 596 GAACAGGATGGTGCCGAAGCTTCCTTGCAGACTACGGAGTTCC 638
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88597909870
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5