BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G15990.1 Length=2130 Score E Sequences producing significant alignments: (Bits) Value Ahg911407 jgi|Araly1|911407|Al_scaffold_0001_1661 3452 0.0 Ahg335228 jgi|Araly1|335228|fgenesh1_pg.C_scaffold_1001793 1916 0.0 Ahg895426 jgi|Araly1|895426|Al_scaffold_0006_3422 800 0.0 Ahg947478 jgi|Araly1|947478|scaffold_703707.1 488 6e-137 Ahg320206 jgi|Araly1|320206|fgenesh1_pm.C_scaffold_4000263 460 1e-128 > Ahg911407 jgi|Araly1|911407|Al_scaffold_0001_1661 Length=2217 Score = 3452 bits (1869), Expect = 0.0 Identities = 2043/2130 (96%), Gaps = 0/2130 (0%) Strand=Plus/Plus Query 1 ATGATGATGCAGAGAAACTGTTTCGGATTTAACCTAAAGAACCGAGGAGGTGAAAAGAAG 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 88 ATGATGATGCAGCGAAACTGTTTCGGATTTAACCTAAAGAACCGAGGAGGTGAAAAGAAG 147 Query 61 AAAGCATCCAAATCTTTCAGGGAAGGAGTTaaaaaaaTCAGATCAGAAGGTCTAATAACC 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 148 AAAGCATCCAAATCTTTCAGGGAAGGAGTCAAAAAAATCAGATCAGAAGGTCTAATAACC 207 Query 121 ATCGGTAAATCCGTTACAAGAGCGGTTTTTCCAGAAGACTTAAGAATAACAGAGAAGAAA 180 ||||||||||| || |||||||| |||||||||||||| ||||||||||| ||||||||| Sbjct 208 ATCGGTAAATCGGTAACAAGAGCAGTTTTTCCAGAAGATTTAAGAATAACCGAGAAGAAA 267 Query 181 ATCTTTGATCCTCAAGACAAAACACTTCTCGTATGGAACAGATTGTTCGTCATTTCGTGT 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 268 ATCTTTGATCCTCAAGACAAAACACTTCTCATATGGAACAGATTGTTCGTCATTTCGTGT 327 Query 241 ATTTTAGCTGTCTCTGTTGATCCTTTGTTCTTCTATCTTCCCATTGTCGATAATTCCGGA 300 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 328 ATTTTAGCTGTCTCAGTTGATCCATTGTTCTTCTATCTTCCCATTGTCGATAATTCCGGA 387 Query 301 AGCAGCTGTATAGGGATTGATACGAAACTAGCTGTTACAACGACGACTCTTAGAACCATT 360 |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 388 AGCAGCTGTATAGGGATTGACACGAAACTAGCTGTTACAACGACGACCCTTAGAACCATC 447 Query 361 GTTGACGTTTTTTACTTAACTAGAATGGCTCTTCAGTTTCGTACAGCTTATATAGCTCCT 420 ||||| || ||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 448 GTTGATGTCTTTTACTTAACTAGAATGGCTCTTCAGTTCCGAACAGCTTATATAGCTCCT 507 Query 421 TCTTCTCGTGTGTTTGGTCGTGGTGAGCTTGTGATTGATCCTGCAAAGATCGCTGAACGC 480 || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 508 TCCTCTCGTGTGTTTGGTCGTGGTGAGCTTGTGATTGATCCTGCAAAGATCGCGGAACGG 567 Query 481 TATTTAACCCGTTATTTCGTCGTCGATTTTCTTGCAGTGCTGCCTTTACCGCAGATTGCA 540 |||||||||||||||||| |||||||||| || |||||||| ||||||||||||||||| Sbjct 568 TATTTAACCCGTTATTTCATCGTCGATTTCCTAGCAGTGCTTCCTTTACCGCAGATTGCG 627 Query 541 GTGTGGAAGTTTCTTCACGGGTCTAAAGGATCGGATGTGTTACCAACGAAAACGGCATTG 600 || ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| Sbjct 628 GTATGGAAGTTTCTTCACGGGTCTAAAGGATCAGATGTGCTACCGACGAAAACGGCATTG 687 Query 601 TTGAACATTGTAATTGTGCAGTATATTCCGAGATTCGTGAGGTTTATTCCGTTAACATCA 660 ||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 688 TTGTACATTGTAATCGTGCAGTATATTCCGAGATTCATGAGGTTTATTCCGTTAACATCA 747 Query 661 GAGTTGAAGAAAACTGCAGGAGCTTTTGCCGAAGGAGCTTGGGCTGGTGCTGCTTATTAT 720 || ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct 748 GAACTGAAGAAAACTGCTGGAGCTTTTGCTGAAGGAGCGTGGGCTGGTGCTGCTTATTAT 807 Query 721 CTTCTCTGGTATATGCTTGCAAGCCACATAACTGGAGCGTTTTGGTACATGTTGTCAGTG 780 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 808 CTCCTCTGGTATATGCTTGCAAGCCACATAACTGGAGCGTTTTGGTACATGTTGTCAGTG 867 Query 781 GAGCGTAACGATACTTGTTGGAGATTTGCGTGTAAAGTTCAGCCAGATCCGCGACTCTGT 840 || |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct 868 GAACGTAACGATACTTGTTGGAGATTTGCTTGTAAGGTCCAGCCAGATCCGCGACTCTGT 927 Query 841 GTTCAGATTCTGTATTGTGGGACTAAATTTGTGAGCAGTGGAGAAACTGAATGGATCAAA 900 ||||||||| |||||||||||| |||||||||||||| | | |||||||||||||||||| Sbjct 928 GTTCAGATTTTGTATTGTGGGAGTAAATTTGTGAGCAATCGCGAAACTGAATGGATCAAA 987 Query 901 ACAGTCCCTGAGCTTCTTAAGAGCAATTGTTCTGCTAAAGCAGATGATTCAAAGTTTAAC 960 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 988 ACAGTCCCTGAGCTTCTCAAGAGCAATTGTTCCGCTAAAGCAGATGATTCAAAGTTTAAC 1047 Query 961 TATGGGATATACGGTCAGGCTATATCTTCAGGCATTGTATCATCAACAACATTTTTCTCC 1020 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1048 TATGGGATATATGGTCAGGCAATATCTTCAGGCATTGTATCATCAACAACATTTTTCTCC 1107 Query 1021 AAGTTCTGTTATTGTCTATGGTGGGGTCTTCAAAATCTCAGCACGTTAGGTCAAGGGCTG 1080 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 1108 AAATTCTGTTATTGTCTATGGTGGGGTCTTCAGAATCTCAGCACGTTAGGTCAAGGACTG 1167 Query 1081 CAGACAAGTACATTTCCAGGAGAGGTTTTGTTTTCCATTGCGATTGCTATAGCTGGGCTT 1140 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1168 CAAACAAGTACATTTCCAGGAGAGGTTTTGTTTTCCATTGCGATTGCTATAGCTGGTCTT 1227 Query 1141 CTTCTTTTCGCGCTTCTCATCGGGAATATGCAGACTTATCTTCAGTCACTTACTGTTCGT 1200 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 1228 CTTCTTTTCGCGCTTCTTATTGGGAATATGCAGACTTATCTTCAGTCACTTACTGTTCGT 1287 Query 1201 CTCGAGGAAATGAGGATCAAAAGACGTGACTCAGAACAGTGGATGCATCACAGGTCACTT 1260 ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||| Sbjct 1288 CTCGAGGAAATGAGGATTAAAAGACGCGACTCGGAACAGTGGATGCATCACAGGTCCCTT 1347 Query 1261 CCACAAAATTTGAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGA 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1348 CCACAAAATTTGAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGA 1407 Query 1321 GGTGTAGACGAAGAAAACATAGTTCAGAGTTTACCTAAGGATCTCAGAAGAGACATCAAA 1380 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1408 GGTGTAGACGAAGAAAACATAGTTCAGAGTTTACCTAAGGATCTCAGGAGAGACATCAAA 1467 Query 1381 CGCCATCTCTGTCTGAATTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGGATGAAAGA 1440 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1468 CGCCATCTCTGTCTCAATTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGGATGAAAGA 1527 Query 1441 TTACTTGACGCAATCTGTGAGAGATTAAAGCCGAGTCTTTTCACGGAAAGCACTTACATT 1500 ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1528 TTACTTGACGCGATCTGTGAGAGATTAAAGCCGAGTCTTTACACGGAAAGCACTTACATT 1587 Query 1501 GTGCGTGAAGGAGACCCCGTTAACGAAATGATGTTCATAATCCGAGGCCGGTTAGAAAGT 1560 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 1588 GTGCGTGAAGGAGACCCGGTTAACGAAATGATGTTCATAATCCGAGGCCGGTTAGAGAGT 1647 Query 1561 GTAACAACAGATGGGGGAAGAAGCGGTTTCTTCAACAGAGGGTTGTTAAAAGAAGGAGAC 1620 |||||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||| Sbjct 1648 GTAACAACAGATGGAGGACGAAGCGGTTTCTTCAACAGAGGGTTATTGAAAGAAGGAGAC 1707 Query 1621 TTTTGTGGTGAAGAGCTTCTGACATGGGCTCTTGACCCTAAAGCAGGCTCAAACTTACCT 1680 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1708 TTTTGTGGTGAAGAGCTTCTGACATGGGCACTTGACCCTAAAGCAGGCTCAAACTTACCT 1767 Query 1681 TCTTCCACAAGAACAGTGAAGGCTCTGACTGAAGTAGAGGCTTTCGCTCTTGAAGCTGAA 1740 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1768 TCTTCCACAAGAACAGTGAAGGCTCTAACTGAAGTAGAGGCTTTCGCTCTTGAAGCTGAA 1827 Query 1741 GAGCTGAAGTTTGTAGCAAGTCAGTTTAGGAGACTTCATAGTCGACAGGTTCAACAAACA 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1828 GAGCTGAAGTTTGTAGCAAGTCAGTTTAGGAGACTTCATAGTCGACAGGTTCAACAAACA 1887 Query 1801 TTTAGGTTTTACTCTCAGCAATGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGG 1860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1888 TTTAGGTTTTACTCTCAGCAATGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGG 1947 Query 1861 CGTCGCTATTCAAGAAGGAAAAACGCTGAATTGAGACGGATTGAAGAAAAAGAAGAAGAA 1920 |||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||||| Sbjct 1948 CGTCGCTATTCAAGAAGGAAAAACGCTGAACTGAGGCGGATAGAAGAAGAAGAAGAAGAA 2007 Query 1921 TTGGGTTATGAAGATGAATATGATGATGAGAGTGACAAGAGGCCTATGGTTATCACAAGA 1980 ||||||||||| |||| |||||||| || |||||||||||||||||||||||||||||| Sbjct 2008 ATGGGTTATGAATATGAGTATGATGAAGAAAGTGACAAGAGGCCTATGGTTATCACAAGA 2067 Query 1981 AGTGAGTCTTCTTCTAGACTGCGTTCAACGATATTTGCATCAAGATTTGCTGCTAATGCA 2040 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2068 ACTGAGTCTTCTTCTAGACTGCGTTCAACGATATTTGCATCAAGATTTGCTGCTAATGCA 2127 Query 2041 TTGAAAGGGCACAGACTTAGGAGCTCAGAGAGTTCAAAGACCTTGATAAATCTGCAAAAG 2100 ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||| Sbjct 2128 TTGAAAGGGCACAGACTAAGGAGCTCAGAGAGTTCAAAGAGCTTGATGAATCTGCAAAAG 2187 Query 2101 CCTCCGGAACCTGATTTTGATGCTGAATAA 2130 |||||||||||||||||||||||||||||| Sbjct 2188 CCTCCGGAACCTGATTTTGATGCTGAATAA 2217 > Ahg335228 jgi|Araly1|335228|fgenesh1_pg.C_scaffold_1001793 Length=2259 Score = 1916 bits (1037), Expect = 0.0 Identities = 1785/2135 (84%), Gaps = 96/2135 (4%) Strand=Plus/Plus Query 44 GAGGAGGTGAA-A-AGAAGAA-AGCATCCAAAT-CTTTCAGGGAAGGAGTTaaaaaaaTC 99 ||||||| ||| | | ||||| | |||| |||| ||||| | ||||| ||| |||||| Sbjct 143 GAGGAGG-GAAGACA-AAGAACA-CATCGAAATCCTTTC-GAGAAGGCGTT---AAAATC 195 Query 100 AGATCAGAAGGTCTAATAACCATCGG----T-A---A-ATC-CGT-T-ACAAGAGCGGTT 147 ||||||| ||||||| ||| || || | | | ||| || | |||||||| ||| Sbjct 196 GGATCAGAGGGTCTAAAAACGATAGGAAAATCATTGACATCAGGTGTGACAAGAGCTGTT 255 Query 148 TTTCCAGAAGACT-TAAGAATAACAGAGAAGAAAATCTTTGATCCTCAAGACAAAACACT 206 || || ||||| | ||||| || | ||||||||||||||||||||||||||||||||||| Sbjct 256 TTCCCTGAAGA-TCTAAGAGTATCTGAGAAGAAAATCTTTGATCCTCAAGACAAAACACT 314 Query 207 TCTCGTATGGAACAGATTGTTCGTCATTTCGTGTATT-TTAGCTGTCTCTGTTGATCCTT 265 | | ||||||||||| |||| || || || || ||| || || ||||||||||||||| Sbjct 315 TTTATTATGGAACAGAATGTTTGTTATCTCTTGCATTCTT-GCGGTCTCTGTTGATCCTC 373 Query 266 TGTTCTTCTATCTTCCCATTGTCGATAATTCCGGAAGCAGCTGTATAGGGATTGA-TACG 324 |||| |||||||| || ||||||||||| || ||| | ||| || || || || | | Sbjct 374 TGTTTTTCTATCTACCGATTGTCGATAACTCA--AAGAA-CTGCATTGGAATCGACT-CT 429 Query 325 AAACTAGCTGTTACAACGACGACTCTTAGAACCATTGTTGACGTTTTTTA-CTTAACTAG 383 ||| ||||||| ||||| || ||||| ||||| || | || |||||||| |||| | | Sbjct 430 AAATTAGCTGTGACAACTACTACTCTAAGAACGATCATCGATGTTTTTTATCTTA-CGCG 488 Query 384 AATGGCTCTTCAGTTTCGTACAGCTTATATAGCTCCTTCTTCTCGTGTGTTTGGTCGTGG 443 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || Sbjct 489 AATGGCTCTTCAGTTTCGTACAGCTTATATTGCTCCTTCTTCTCGTGTGTTTGGAAGAGG 548 Query 444 TGAGCTTGTGATTGATCCTGCAAAGATCGCTGAACGCTATTTAACCCGTTATTTCGTCGT 503 |||||||||||| || ||||||||||| |||||||| ||||| || || |||||| | || Sbjct 549 TGAGCTTGTGATCGACCCTGCAAAGATTGCTGAACGGTATTTGACTCGCTATTTCATTGT 608 Query 504 CGATTTTCTTGCAGTGCTGCCTTTACCGCAGATTGCAGTGTGGAAGTTTCTTCACGGGTC 563 |||||| || || || || || ||||| |||||||| |||||||||||||||||||| || Sbjct 609 CGATTTCCTCGCGGTTCTTCCCTTACCTCAGATTGCGGTGTGGAAGTTTCTTCACGGATC 668 Query 564 TAAAGGATCGGATGTGTTACCAACGAAAAC-GGCATTGTTGA-ACATTGTAATTGTGCAG 621 ||||||| | ||||| |||||||| ||||| ||| | || | ||||||| || ||| Sbjct 669 TAAAGGAACAGATGTATTACCAAC-AAAACAGGCGCTATT-ACACATTGTCATCACACAG 726 Query 622 TATATTCCGAGATTCGTGAGGTTTATTCCGTTAACATCAGAGTTGAAGAAAACTGCAGGA 681 || || || |||||||| ||||||||||| |||||||| ||| | |||||||| |||||| Sbjct 727 TACATACCAAGATTCGTTAGGTTTATTCCATTAACATCGGAGCTCAAGAAAACAGCAGGA 786 Query 682 GCTTTTGCCGAAGGAGCTTGGGCTGGTGCTGCTTATTATCTTCTCTGGTATATGCTTGCA 741 ||||| || ||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct 787 GCTTTCGCTGAAGGTGCTTGGGCTGGTGCTGCTTATTACCTCCTCTGGTATATGCTTGCA 846 Query 742 AGCCACATAACTGGAGCGTTTTGGTACATGTTGTCAGTGGAGCGTAACGATACTTG-TTG 800 |||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || ||| Sbjct 847 AGCCACATTACTGGAGCGTTCTGGTACATGTTGTCAGTGGAACGTAACGATACATGCTTG 906 Query 801 GAGATTTGCGTGTAAAGTTCAGCCAGATCCGCGAC-TCTGTGTTCAGATTCTGTATTGTG 859 |||| || |||||||| ||||| ||||| | | | |||||||||||||||||||||| Sbjct 907 -AGATCCGCTTGTAAAGTCCAGCCTGATCC-CAAGGTTTGTGTTCAGATTCTGTATTGTG 964 Query 860 GGA-CTAAATTTGTGAGCAGTGGAGAAACTGAATGGATCAAAACAGTCCCTGAGCTTCTT 918 | | | ||||| |||||||| | || || || ||||||||| |||||||||| ||| || Sbjct 965 GCAGC-AAATTAATGAGCAGTCGCGACACCGACTGGATCAAATCAGTCCCTGATCTT-TT 1022 Query 919 -AAGAGCAATTGTTCTGCTAAA-GCAGATGATTC-AAAGTTTAACTATGGGATATACGGT 975 |||| |||||||||||| ||| || ||||| || ||| || || || || || || | Sbjct 1023 CAAGAACAATTGTTCTGCGAAAAGC-GATGAGTCCAAA-TTCAATTACGGAATCTATAGC 1080 Query 976 CAGGCTATATCTTCAGGCATTGTATCATCAACAACATTTTTCTCCAAGTTCTGTTATTGT 1035 |||||| | ||||| || |||||||| || ||||| |||||||||||||| ||||||||| Sbjct 1081 CAGGCTGTGTCTTCTGGAATTGTATCTTCGACAACGTTTTTCTCCAAGTTTTGTTATTGT 1140 Query 1036 CTATGGTGGGGTCTTCAAAATCTCAGCACGTTAGGTCAAGGGCTGCAGACAAGTACATTT 1095 || ||||||||||| ||||||||||| |||||||||||||||||||| |||||||| | | Sbjct 1141 CTTTGGTGGGGTCTCCAAAATCTCAGTACGTTAGGTCAAGGGCTGCAAACAAGTACCTAT 1200 Query 1096 CCAGGAGAGGTTTTGTTTTCCATTGCGATTGCTATAGCTGGGCTTCTTCTT-TTCGCGCT 1154 |||||||| ||||||||||| ||||| |||||| |||| || ||||| ||| || || || Sbjct 1201 CCAGGAGAAGTTTTGTTTTCAATTGCAATTGCTGTAGCCGGACTTCT-CTTGTTTGCTCT 1259 Query 1155 TCTCATCGGGAATATGCAGACTTATCTTCAGTCACTTACTGTTCGTCTCGAGGAAATGAG 1214 |||||||||||||||||| |||||||| ||||||||||| |||||| | ||||||||||| Sbjct 1260 TCTCATCGGGAATATGCAAACTTATCTGCAGTCACTTACGGTTCGTTTAGAGGAAATGAG 1319 Query 1215 GATCAAAAGACGTGACTCAGAACAGTGGATGCATCACAGGTCACTTCCACAAAATTTGAG 1274 ||| |||||||| || || ||||||||||||||||||||||||||||||||||| |||| Sbjct 1320 GATTAAAAGACGCGATTCCGAACAGTGGATGCATCACAGGTCACTTCCACAAAACCTGAG 1379 Query 1275 GGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGAGGTGTAGACGAAGA 1334 |||| |||||||||| ||||||||||||||||||||||| |||||||| || |||||||| Sbjct 1380 GGAACGAGTCAGACGTTATGATCAATACAAATGGTTAGAAACAAGAGGAGTCGACGAAGA 1439 Query 1335 AAACATAGTTCAGAGTTTACCTAAGGATCTCAGAAGAGACATCAAACGCCATCTCTGTCT 1394 ||||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct 1440 AAACATAGTCCAGAGTTTACCAAAAGATCTTAGAAGAGACATCAAACGCCATCTCTGTCT 1499 Query 1395 GAATTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGGATGAAAGATTACTTGACGCAAT 1454 ||| |||||| | ||||||||||||||||||||||||||||| ||| |||| |||||||| Sbjct 1500 GAACTTAGTTCGCAGGGTTCCTCTGTTTGCTAATATGGATGAGAGACTACTAGACGCAAT 1559 Query 1455 CTGTGAGAGATTAAAGCCGAGTCTTTTCACGGAAAGCACTTACATTGTGCGTGAAGGAGA 1514 ||||||||| ||||||| ||||| | ||| || ||||||||||| ||||| |||||||| Sbjct 1560 ATGTGAGAGACTAAAGCCAAGTCTATACACAGAGAGCACTTACATAGTGCGAGAAGGAGA 1619 Query 1515 CCCCGTTAACGAAATGATGTTCATAATCCGAGGCCGGTTAGAAAGTGTAACAACAGATGG 1574 ||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1620 CCCGGTTAACGAAATGCTGTTCATAATCCGAGGCCGGTTAGAGAGTGTAACGACAGATGG 1679 Query 1575 GGGAAGAAGCGGTTTCTTCAACAGAGGGTTGTTAAAAGAAGGAGACTTTTGTGGTGAAGA 1634 |||||||| |||||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct 1680 TGGAAGAAGTGGTTTCTTTAACAGAGGTTTATTGAAAGAAGGCGACTTTTGTGGTGAAGA 1739 Query 1635 GCTTCTGACATGGGCTCTTGACCCTAAAGCAGGCTCAAACTTACCTTCTTCCACAAGAAC 1694 ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1740 GCTTCTGACTTGGGCACTTGACCCTAAAGCAGGCTCAAACTTGCCTTCTTCCACAAGAAC 1799 Query 1695 AGTGAAGGCTCTGACTGAAGTAGAGGCTTTCGCTCTT-GAAGCTGAAGAGCTGAAGTTTG 1753 |||||||||||| ||||||||||||||||||||| || |||||||||||||| || |||| Sbjct 1800 AGTGAAGGCTCTAACTGAAGTAGAGGCTTTCGCT-TTAGAAGCTGAAGAGCTCAAATTTG 1858 Query 1754 TAGCAAGTCAGTTTAGGAGACTTCATAGTCGACAGGTTCAACAAACATTTAGGTTTTACT 1813 | || |||||||| ||| | ||||| ||||| || || |||||||| || |||||||||| Sbjct 1859 TGGCTAGTCAGTTCAGGCGTCTTCACAGTCGTCAAGTCCAACAAACGTTCAGGTTTTACT 1918 Query 1814 CTCAGCAATGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGGCGTCG-CTA-TTC 1871 |||| |||||||| ||||||||| |||| || |||||||| ||||||||| | | | || Sbjct 1919 CTCAACAATGGAGGACTTGGGCTGCTTGTTTTATCCAAGCCGCTTGGCGTAGAC-ACTT- 1976 Query 1872 AAGAAGGAAAAACGCTGAA-TTGAGACGGATTGAAGAAAAAGAAGAAGAATTGGGTTATG 1930 ||||||||||| ||| || || ||||| | ||||| ||||||||||| ||| ||||| Sbjct 1977 AAGAAGGAAAATCGCAGAGCTT-AGACGTA---AAGAAGAAGAAGAAGAAATGGATTATG 2032 Query 1931 AAGATGAATATGA-TGATGA-GAGTGACAAGAG-GCCTATGGTTATCACAAGAAGTGA-- 1985 ||||||| || || | |||| || | | | | | | | |||||| || | || |||| Sbjct 2033 AAGATGATTACGAGT-ATGATGA-TAATATGGGTGG-TGTGGTTA-CA-AGGA-GTGATA 2086 Query 1986 GT-CT--T----C---TTCTAGACTGCGTTCAACGATATTTGCATCAAGATTTGCTGCTA 2035 || || | | ||||||| | ||||| ||| |||||||||||||||||||||||| Sbjct 2087 GTTCTGCTGGATCAAGTTCTAGATTACGTTCCACGGTATTTGCATCAAGATTTGCTGCTA 2146 Query 2036 ATGCA-TTGAAAGGG-CACA-GACTTAGGAG-CTCAGAGAGTTCAAAGACCTTGATAAAT 2091 | || || || ||| || | | || ||| | ||| ||||||||||||| ||| | ||| Sbjct 2147 ACGCGCTT-AA-GGGTCATAAG-CTAAGG-GTCTCCGAGAGTTCAAAGAGTTTGGTGAAT 2202 Query 2092 CTGCA-AAAGCC-TCCGGAACCTGATTTTGATGCT 2124 || | |||||| || | |||||||||| || ||| Sbjct 2203 CTA-AGAAAGCCATCAG-AACCTGATTTCGAGGCT 2235 > Ahg895426 jgi|Araly1|895426|Al_scaffold_0006_3422 Length=930 Score = 800 bits (433), Expect = 0.0 Identities = 596/670 (89%), Gaps = 29/670 (4%) Strand=Plus/Plus Query 1037 TATGGTGGGGTCTTCAAAATCTCAGCACGTTAGGTCAAGGGCTGCAGACAAGTACATTTC 1096 ||| ||||| |||||||||||||||| | |||| |||||||||||| ||||||||||||| Sbjct 276 TATTGTGGGATCTTCAAAATCTCAGCGCCTTAGTTCAAGGGCTGCAAACAAGTACATTTC 335 Query 1097 CAGGAGAGGTTTTGTTTTCCATTGCGATT-GCTATAGCTGGGCTTCTTCTTTTCGCGCTT 1155 ||||||||||||||||||||| ||| || | | | ||| |||||| |||||||||| Sbjct 336 CAGGAGAGGTTTTGTTTTCCAGCGCG-TTAGGT-CA--AGGGTTTCTTC-TTTCGCGCTT 390 Query 1156 CTCA-TCGGGAATATGCAGAC--TT-ATCTTCAGTCACTTACTGTTCGTCTCGAGGAAAT 1211 || | |||||||||||| || || |||||| | |||||||||||||||||||||||| Sbjct 391 CT-ACTCGGGAATATGCTTACTGTTCGTCTTCATTTACTTACTGTTCGTCTCGAGGAAAT 449 Query 1212 GAGGATCAAAAGACGTGACTCAGAACAGTGGATGCATCACAGGTCACTTCCACAAAATTT 1271 ||||||||||||| ||||||| ||||| | | ||||||||||||||||||||||||| Sbjct 450 GAGGATCAAAAGATGTGACTCGGAACA---G-T--ATCACAGGTCACTTCCACAAAATTT 503 Query 1272 GAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGAGGTGT-AGACG 1330 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | | Sbjct 504 GAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACCAGAGGTGTTA-AGG 562 Query 1331 AAGAAAACATAGTTCAGAGTTTACCTAAGGATCTCAGAAGAGACATCAAACGCCATCTCT 1390 ||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||| | Sbjct 563 AAGAAAATTTAGTTCAGAGTTTAGCTACGGATCTCAGAAGAGACATCAAACGTCATCTTT 622 Query 1391 GTCTGAATTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGGATGAAAGATTACTTGACG 1450 | |||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 623 GCCTGAGTTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGAATGAAAGATTACTCGAC- 681 Query 1451 CAATCTGTGAGAGATTAAAGCCGAGTCTTTTCACGGAAAGCACTTACATTGTGCGTGAAG 1510 || |||||||||||||||||||||||||| || ||||||||||| |||||||||||||| Sbjct 682 -AA-CTGTGAGAGATTAAAGCCGAGTCTTTACAAGGAAAGCACTTTCATTGTGCGTGAAG 739 Query 1511 GAGACCCCGTTAACGAAATGATGTTCATAATCCGAGGCCGGTTAGAAAGTGTAACAAC-A 1569 || |||| ||||| |||||||||||||||||||||||||||||||| ||||||||| | | Sbjct 740 GAAACCCGGTTAATGAAATGATGTTCATAATCCGAGGCCGGTTAGAGAGTGTAACA-CTA 798 Query 1570 GATGGGGGAAGAAGCGGTTTCTTCAACAGAGGGTTGTTA---AAAGAAGGAGACTTTTGT 1626 ||||| ||||||||| ||||||| ||||||||||| || |||||||||||||||||| Sbjct 799 GATGGAGGAAGAAGCTGTTTCTTTAACAGAGGGTTAATATTGAAAGAAGGAGACTTTTGT 858 Query 1627 GGTGA-AGAGCTTCTGACATGGGCTCTTGACCCTAAAGCAGGCTCAAACTTACCTTCTTC 1685 ||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 859 GGTGATA-AGCTTCTGACATGGGCTCTTGACCTTAAAGCAGGCTCAATCTTACCTTCTTC 917 Query 1686 CACAAGAACA 1695 |||||||||| Sbjct 918 CACAAGAACA 927 Score = 298 bits (161), Expect = 1e-79 Identities = 194/210 (92%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 653 TAACATCAGAGTTGAAGAAAACTGCAGGAGCTTTTGCCGAAGGAGCTTGGGCTGGTGCTG 712 ||||||| || |||||||||||| |||||| |||||| | |||||||||||||||||||| Sbjct 77 TAACATCCGAATTGAAGAAAACTACAGGAGATTTTGCTGTAGGAGCTTGGGCTGGTGCTG 136 Query 713 CTTATTATCTTCTCTGGTATATGCTTGCAAGCCACATAACTGGAGCGTTTTGGTACATGT 772 | ||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 137 CCCATTATCTCCTCTGGTATATGCTTGCAAGCCACATAACTGGAGCATTCTGGTACATGT 196 Query 773 TGTCAGTGGAGCGTAACGATACTTGTTGGAGATTTGCGTGTAAAGTTCAGCCAGATCCGC 832 ||| |||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 197 TGTTAGTGGAACGTAATGATACTTGTTGGAGATTTGCGTGT-AAGTTCAGCCAGATCCGT 255 Query 833 GACTCTGTGTTCAGATTCTGTATTGTGGGA 862 |||||||||||||||||||||||||||||| Sbjct 256 GACTCTGTGTTCAGATTCTGTATTGTGGGA 285 > Ahg947478 jgi|Araly1|947478|scaffold_703707.1 Length=866 Score = 488 bits (264), Expect = 6e-137 Identities = 429/501 (86%), Gaps = 42/501 (8%) Strand=Plus/Plus Query 913 CTTCTTAAGAGCAATTGTTCTGCTAAAGCAGATGATTCAAAGTTTAACTATGGGATATAC 972 ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 219 CTTCTCAAGAGCAATTGTTCTGCTAAAGGAGATGATTCAAAGTTTAACTTTGGGATATAC 278 Query 973 GGTCAGGCTATATCTTCAGGCATTGTATCATCAACAACATTTTTCTCCAAGTTCTGTTAT 1032 ||||| |||||||||| | | | || || | |||||||||||||||||| Sbjct 279 GGTCAAGCTATATCTT----C-----A--A--AA-AA-A---TTCTCCAAGTTCTGTTAT 320 Query 1033 TGTCTATGGTGGGGTCTTCAAAATCTCAGCACGTTAGGTCAAGGGCTGCAGACAAGTACA 1092 ||| |||||||| || |||||||||| | ||||||||||||||| ||||||||| Sbjct 321 TGTATATGGTGGAGTTTTCAAAATCT-----C---AGGTCAAGGGCTGCAAACAAGTACA 372 Query 1093 TTTCCAGGAGAGGTTTTGTTTTCCATTGCGATT-GCTATAGCTGGGCTTCTTCTTTTCGC 1151 ||||||||||||||||||||||||| ||| || | | | ||| |||||| |||||| Sbjct 373 TTTCCAGGAGAGGTTTTGTTTTCCAGCGCG-TTAGGT-CA--AGGGTTTCTTC-TTTCGC 427 Query 1152 GCTTCTCA-TCGGGAATATGCAGACTTATCTTCAGTCACTTACTGTTCGTCTCGAGGAAA 1210 |||||| | |||||||||||||||| |||||||| | |||||||||||||||||| |||| Sbjct 428 GCTTCT-ACTCGGGAATATGCAGACCTATCTTCATTTACTTACTGTTCGTCTCGACGAAA 486 Query 1211 TGAGGATCAAAAGACGTGACTCAGAACAGTGGATGCATCACAGGTCACTTCCACAAAATT 1270 |||||||||||||| ||||||| ||||| | | |||||||||||||||||||||||| Sbjct 487 TGAGGATCAAAAGATGTGACTCGGAACA---G-T--ATCACAGGTCACTTCCACAAAATT 540 Query 1271 TGAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGAGGTGT-AGAC 1329 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | Sbjct 541 TGAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACCAGAGGTGTTA-AG 599 Query 1330 GAAGAAAACATAGTTCAGAGTTTACCTAAGGATCTCAGAAGAGACATCAAACGCCATCTC 1389 |||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||| Sbjct 600 GAAGAAAATTTAGTTCAGAGTTTAGCTACGGATCTCAGAAGAGACATCAAACGTCATCTT 659 Query 1390 TGTCTGAATTTAGTTAGGAGG 1410 || |||| ||||||||||||| Sbjct 660 TGCCTGAGTTTAGTTAGGAGG 680 > Ahg320206 jgi|Araly1|320206|fgenesh1_pm.C_scaffold_4000263 Length=2241 Score = 460 bits (249), Expect = 1e-128 Identities = 678/879 (77%), Gaps = 53/879 (6%) Strand=Plus/Plus Query 1008 AACATTTTTCTCCAAGTTC-TGTTATTGTCTATGGTGGGGTCTTCAAAATCTCAG--CAC 1064 ||| ||| |||| |||| | | || ||| | |||||||| || || ||||| || ||| Sbjct 1129 AAC-TTTGTCTCTAAGTACTTCTT-CTGTTTGTGGTGGGGACTACAGAATCTTAGTACAC 1186 Query 1065 GTTAGGTCAAGGGC-TGCAGACAAGTACATTTCCAGGAGAGGTTTTGTTTTCCATTGCGA 1123 || |||||||||| || | || || |||| || ||||||||| | || || || | | Sbjct 1187 -TT-GGTCAAGGGCTTG-AAACCAGCACATACCCTGGAGAGGTTATATTCTCTATAAC-A 1242 Query 1124 -TTGCTATAGCTGGGCTTCTTCT-TTTCGCGCTTCTCATCGGGAATATGCAGACTTATCT 1181 ||||||| ||||| ||||| || ||| || |||||||| || || |||||||||||||| Sbjct 1243 CTTGCTATTGCTGGACTTCTACTCTTT-GCACTTCTCATTGGAAACATGCAGACTTATCT 1301 Query 1182 TCAGTCACTTACTGTTC-GTCTCGAGGAAATGAGGA-TCAAAAGACGTGACTCAGAACAG 1239 ||| || ||||| | | || | || |||||| || ||||||||||||||||||||||| Sbjct 1302 TCAATCGCTTACCATCCGGT-TAGAAGAAATG-CGAGTCAAAAGACGTGACTCAGAACAG 1359 Query 1240 TGGATGCATCA-C-AGGTCACTTCCACAA-AATTTGAGGGAAAGAGTCAGACGCTATGAT 1296 ||||||| ||| | | | ||||||| | || | | ||||| | || ||||| |||||| Sbjct 1360 TGGATGCGTCATCGAA-TG-CTTCCACCAGAACT-GCGGGAACGGGTTAGACGATATGAT 1416 Query 1297 CAATACAAATGGTTAGAGACAAGAGGTGTAGACGAAGAAAA-CATAGTTCAGAGTTTACC 1355 || ||||| ||||| ||||| | || || || ||||| || | | ||||||| | || Sbjct 1417 CAGTACAAGTGGTTGGAGACGCGTGGCGTTGATGAAGAGAATCTT-GTTCAGAACCTCCC 1475 Query 1356 TAAGGATCTCAGAAGAGACATCAAACGCCATCTCTGTCT-GAATTTAGTTAGGAGGGTTC 1414 |||||||| |||||||| |||||||| ||||||||||| | || ||| | || |||| Sbjct 1476 AAAGGATCTTAGAAGAGATATCAAACGTCATCTCTGTCTCGCCTT-AGTCCGAAGAGTTC 1534 Query 1415 C-TCTGTTTGCTAATATGGATGAAAGATTACTTGACGCAATCTGTGAGAGA-TTAAAGCC 1472 | | |||||| ||||||||||| || | || || |||||||||||||| |||| ||| Sbjct 1535 CAT-TGTTTGAGAATATGGATGAGAGGCTGCTAGATGCAATCTGTGAGAGGCTTAA-GCC 1592 Query 1473 GA-GTCTTTTCACGGA-AAGCACTTACATTG-TGCGTGAAGGAGACCCCGTTAACGAAAT 1529 | |||| ||||| || ||| ||||| ||| | ||||| ||||| || || || ||||| Sbjct 1593 -ATGTCTGTTCACTGAGAAGT-CTTAC-TTGGTTCGTGAGGGAGATCCAGTCAATGAAAT 1649 Query 1530 GATGTTCATAATCCGAGGCCGGTTAGAAAGTGTAACAACAGATGG-GGGAAGAAGCGGTT 1588 | | |||||||| || || || | || |||||||| || ||||| |||| ||||||| | Sbjct 1650 GCTCTTCATAATTCGTGGTAGGCTCGAGAGTGTAACCACTGATGGTGGGA-GAAGCGGAT 1708 Query 1589 TCTTCAACAGAGGGTT-G-TTAAAAGAAGGAGACTTT-TGTGGTGAAGAGCTTCTGACAT 1645 ||| |||| | | ||| | ||||| |||||||| ||| || ||||| |||||| |||||| Sbjct 1709 TCTACAACCG-GAGTTTGCTTAAA-GAAGGAGA-TTTCTGCGGTGACGAGCTTTTGACAT 1765 Query 1646 GGGCTCTTGA-CCCTAAAGCAGGCTCAAACTTACCTTCTTCCACAAGAACAGTGAAGGCT 1704 |||| ||||| ||| ||| | || || ||| | || || || |||||||| |||||||| Sbjct 1766 GGGCGCTTGATCCC-AAATCCGGTTCTAACCTCCCGTCCTCAACAAGAACCGTGAAGGC- 1823 Query 1705 CTGA-CTGAAGTAGAGGCTTTCGCTCTTGA-AGCTGAAGAGCTGAAGTTTGTAGCAAGTC 1762 || | | |||||||| ||||||||||| || ||| || |||||||| || || || || | Sbjct 1824 CTTAACAGAAGTAGAAGCTTTCGCTCT-GATAGCCGATGAGCTGAAATTCGTGGCGAGCC 1882 Query 1763 AGTTTAGGAGACTTCATAGTC-GACAGGTTCAACAAACATTTAGGTTTTACTCTCAGCAA 1821 |||| || ||||| ||||| | |||| || ||||| || || || || || || |||||| Sbjct 1883 AGTTCAGAAGACTCCATAG-CAGACAAGTACAACACACGTTCAGATTCTATTCACAGCAA 1941 Query 1822 TGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGG 1860 ||||| |||||||| |||||||||| ||||| || ||| Sbjct 1942 TGGAGGACTTGGGCCGCTTGCTTCATGCAAGCCGCATGG 1980 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80141875480 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5