BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G15990.1
Length=2130
Score E
Sequences producing significant alignments: (Bits) Value
Ahg911407 jgi|Araly1|911407|Al_scaffold_0001_1661 3452 0.0
Ahg335228 jgi|Araly1|335228|fgenesh1_pg.C_scaffold_1001793 1916 0.0
Ahg895426 jgi|Araly1|895426|Al_scaffold_0006_3422 800 0.0
Ahg947478 jgi|Araly1|947478|scaffold_703707.1 488 6e-137
Ahg320206 jgi|Araly1|320206|fgenesh1_pm.C_scaffold_4000263 460 1e-128
> Ahg911407 jgi|Araly1|911407|Al_scaffold_0001_1661
Length=2217
Score = 3452 bits (1869), Expect = 0.0
Identities = 2043/2130 (96%), Gaps = 0/2130 (0%)
Strand=Plus/Plus
Query 1 ATGATGATGCAGAGAAACTGTTTCGGATTTAACCTAAAGAACCGAGGAGGTGAAAAGAAG 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 88 ATGATGATGCAGCGAAACTGTTTCGGATTTAACCTAAAGAACCGAGGAGGTGAAAAGAAG 147
Query 61 AAAGCATCCAAATCTTTCAGGGAAGGAGTTaaaaaaaTCAGATCAGAAGGTCTAATAACC 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 148 AAAGCATCCAAATCTTTCAGGGAAGGAGTCAAAAAAATCAGATCAGAAGGTCTAATAACC 207
Query 121 ATCGGTAAATCCGTTACAAGAGCGGTTTTTCCAGAAGACTTAAGAATAACAGAGAAGAAA 180
||||||||||| || |||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct 208 ATCGGTAAATCGGTAACAAGAGCAGTTTTTCCAGAAGATTTAAGAATAACCGAGAAGAAA 267
Query 181 ATCTTTGATCCTCAAGACAAAACACTTCTCGTATGGAACAGATTGTTCGTCATTTCGTGT 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 268 ATCTTTGATCCTCAAGACAAAACACTTCTCATATGGAACAGATTGTTCGTCATTTCGTGT 327
Query 241 ATTTTAGCTGTCTCTGTTGATCCTTTGTTCTTCTATCTTCCCATTGTCGATAATTCCGGA 300
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 328 ATTTTAGCTGTCTCAGTTGATCCATTGTTCTTCTATCTTCCCATTGTCGATAATTCCGGA 387
Query 301 AGCAGCTGTATAGGGATTGATACGAAACTAGCTGTTACAACGACGACTCTTAGAACCATT 360
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 388 AGCAGCTGTATAGGGATTGACACGAAACTAGCTGTTACAACGACGACCCTTAGAACCATC 447
Query 361 GTTGACGTTTTTTACTTAACTAGAATGGCTCTTCAGTTTCGTACAGCTTATATAGCTCCT 420
||||| || ||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 448 GTTGATGTCTTTTACTTAACTAGAATGGCTCTTCAGTTCCGAACAGCTTATATAGCTCCT 507
Query 421 TCTTCTCGTGTGTTTGGTCGTGGTGAGCTTGTGATTGATCCTGCAAAGATCGCTGAACGC 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 508 TCCTCTCGTGTGTTTGGTCGTGGTGAGCTTGTGATTGATCCTGCAAAGATCGCGGAACGG 567
Query 481 TATTTAACCCGTTATTTCGTCGTCGATTTTCTTGCAGTGCTGCCTTTACCGCAGATTGCA 540
|||||||||||||||||| |||||||||| || |||||||| |||||||||||||||||
Sbjct 568 TATTTAACCCGTTATTTCATCGTCGATTTCCTAGCAGTGCTTCCTTTACCGCAGATTGCG 627
Query 541 GTGTGGAAGTTTCTTCACGGGTCTAAAGGATCGGATGTGTTACCAACGAAAACGGCATTG 600
|| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||
Sbjct 628 GTATGGAAGTTTCTTCACGGGTCTAAAGGATCAGATGTGCTACCGACGAAAACGGCATTG 687
Query 601 TTGAACATTGTAATTGTGCAGTATATTCCGAGATTCGTGAGGTTTATTCCGTTAACATCA 660
||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 688 TTGTACATTGTAATCGTGCAGTATATTCCGAGATTCATGAGGTTTATTCCGTTAACATCA 747
Query 661 GAGTTGAAGAAAACTGCAGGAGCTTTTGCCGAAGGAGCTTGGGCTGGTGCTGCTTATTAT 720
|| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct 748 GAACTGAAGAAAACTGCTGGAGCTTTTGCTGAAGGAGCGTGGGCTGGTGCTGCTTATTAT 807
Query 721 CTTCTCTGGTATATGCTTGCAAGCCACATAACTGGAGCGTTTTGGTACATGTTGTCAGTG 780
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 808 CTCCTCTGGTATATGCTTGCAAGCCACATAACTGGAGCGTTTTGGTACATGTTGTCAGTG 867
Query 781 GAGCGTAACGATACTTGTTGGAGATTTGCGTGTAAAGTTCAGCCAGATCCGCGACTCTGT 840
|| |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 868 GAACGTAACGATACTTGTTGGAGATTTGCTTGTAAGGTCCAGCCAGATCCGCGACTCTGT 927
Query 841 GTTCAGATTCTGTATTGTGGGACTAAATTTGTGAGCAGTGGAGAAACTGAATGGATCAAA 900
||||||||| |||||||||||| |||||||||||||| | | ||||||||||||||||||
Sbjct 928 GTTCAGATTTTGTATTGTGGGAGTAAATTTGTGAGCAATCGCGAAACTGAATGGATCAAA 987
Query 901 ACAGTCCCTGAGCTTCTTAAGAGCAATTGTTCTGCTAAAGCAGATGATTCAAAGTTTAAC 960
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 988 ACAGTCCCTGAGCTTCTCAAGAGCAATTGTTCCGCTAAAGCAGATGATTCAAAGTTTAAC 1047
Query 961 TATGGGATATACGGTCAGGCTATATCTTCAGGCATTGTATCATCAACAACATTTTTCTCC 1020
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1048 TATGGGATATATGGTCAGGCAATATCTTCAGGCATTGTATCATCAACAACATTTTTCTCC 1107
Query 1021 AAGTTCTGTTATTGTCTATGGTGGGGTCTTCAAAATCTCAGCACGTTAGGTCAAGGGCTG 1080
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1108 AAATTCTGTTATTGTCTATGGTGGGGTCTTCAGAATCTCAGCACGTTAGGTCAAGGACTG 1167
Query 1081 CAGACAAGTACATTTCCAGGAGAGGTTTTGTTTTCCATTGCGATTGCTATAGCTGGGCTT 1140
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1168 CAAACAAGTACATTTCCAGGAGAGGTTTTGTTTTCCATTGCGATTGCTATAGCTGGTCTT 1227
Query 1141 CTTCTTTTCGCGCTTCTCATCGGGAATATGCAGACTTATCTTCAGTCACTTACTGTTCGT 1200
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1228 CTTCTTTTCGCGCTTCTTATTGGGAATATGCAGACTTATCTTCAGTCACTTACTGTTCGT 1287
Query 1201 CTCGAGGAAATGAGGATCAAAAGACGTGACTCAGAACAGTGGATGCATCACAGGTCACTT 1260
||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct 1288 CTCGAGGAAATGAGGATTAAAAGACGCGACTCGGAACAGTGGATGCATCACAGGTCCCTT 1347
Query 1261 CCACAAAATTTGAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGA 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1348 CCACAAAATTTGAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGA 1407
Query 1321 GGTGTAGACGAAGAAAACATAGTTCAGAGTTTACCTAAGGATCTCAGAAGAGACATCAAA 1380
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1408 GGTGTAGACGAAGAAAACATAGTTCAGAGTTTACCTAAGGATCTCAGGAGAGACATCAAA 1467
Query 1381 CGCCATCTCTGTCTGAATTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGGATGAAAGA 1440
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1468 CGCCATCTCTGTCTCAATTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGGATGAAAGA 1527
Query 1441 TTACTTGACGCAATCTGTGAGAGATTAAAGCCGAGTCTTTTCACGGAAAGCACTTACATT 1500
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1528 TTACTTGACGCGATCTGTGAGAGATTAAAGCCGAGTCTTTACACGGAAAGCACTTACATT 1587
Query 1501 GTGCGTGAAGGAGACCCCGTTAACGAAATGATGTTCATAATCCGAGGCCGGTTAGAAAGT 1560
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1588 GTGCGTGAAGGAGACCCGGTTAACGAAATGATGTTCATAATCCGAGGCCGGTTAGAGAGT 1647
Query 1561 GTAACAACAGATGGGGGAAGAAGCGGTTTCTTCAACAGAGGGTTGTTAAAAGAAGGAGAC 1620
|||||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct 1648 GTAACAACAGATGGAGGACGAAGCGGTTTCTTCAACAGAGGGTTATTGAAAGAAGGAGAC 1707
Query 1621 TTTTGTGGTGAAGAGCTTCTGACATGGGCTCTTGACCCTAAAGCAGGCTCAAACTTACCT 1680
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1708 TTTTGTGGTGAAGAGCTTCTGACATGGGCACTTGACCCTAAAGCAGGCTCAAACTTACCT 1767
Query 1681 TCTTCCACAAGAACAGTGAAGGCTCTGACTGAAGTAGAGGCTTTCGCTCTTGAAGCTGAA 1740
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1768 TCTTCCACAAGAACAGTGAAGGCTCTAACTGAAGTAGAGGCTTTCGCTCTTGAAGCTGAA 1827
Query 1741 GAGCTGAAGTTTGTAGCAAGTCAGTTTAGGAGACTTCATAGTCGACAGGTTCAACAAACA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1828 GAGCTGAAGTTTGTAGCAAGTCAGTTTAGGAGACTTCATAGTCGACAGGTTCAACAAACA 1887
Query 1801 TTTAGGTTTTACTCTCAGCAATGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGG 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1888 TTTAGGTTTTACTCTCAGCAATGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGG 1947
Query 1861 CGTCGCTATTCAAGAAGGAAAAACGCTGAATTGAGACGGATTGAAGAAAAAGAAGAAGAA 1920
|||||||||||||||||||||||||||||| |||| ||||| |||||| |||||||||||
Sbjct 1948 CGTCGCTATTCAAGAAGGAAAAACGCTGAACTGAGGCGGATAGAAGAAGAAGAAGAAGAA 2007
Query 1921 TTGGGTTATGAAGATGAATATGATGATGAGAGTGACAAGAGGCCTATGGTTATCACAAGA 1980
||||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||
Sbjct 2008 ATGGGTTATGAATATGAGTATGATGAAGAAAGTGACAAGAGGCCTATGGTTATCACAAGA 2067
Query 1981 AGTGAGTCTTCTTCTAGACTGCGTTCAACGATATTTGCATCAAGATTTGCTGCTAATGCA 2040
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2068 ACTGAGTCTTCTTCTAGACTGCGTTCAACGATATTTGCATCAAGATTTGCTGCTAATGCA 2127
Query 2041 TTGAAAGGGCACAGACTTAGGAGCTCAGAGAGTTCAAAGACCTTGATAAATCTGCAAAAG 2100
||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||
Sbjct 2128 TTGAAAGGGCACAGACTAAGGAGCTCAGAGAGTTCAAAGAGCTTGATGAATCTGCAAAAG 2187
Query 2101 CCTCCGGAACCTGATTTTGATGCTGAATAA 2130
||||||||||||||||||||||||||||||
Sbjct 2188 CCTCCGGAACCTGATTTTGATGCTGAATAA 2217
> Ahg335228 jgi|Araly1|335228|fgenesh1_pg.C_scaffold_1001793
Length=2259
Score = 1916 bits (1037), Expect = 0.0
Identities = 1785/2135 (84%), Gaps = 96/2135 (4%)
Strand=Plus/Plus
Query 44 GAGGAGGTGAA-A-AGAAGAA-AGCATCCAAAT-CTTTCAGGGAAGGAGTTaaaaaaaTC 99
||||||| ||| | | ||||| | |||| |||| ||||| | ||||| ||| ||||||
Sbjct 143 GAGGAGG-GAAGACA-AAGAACA-CATCGAAATCCTTTC-GAGAAGGCGTT---AAAATC 195
Query 100 AGATCAGAAGGTCTAATAACCATCGG----T-A---A-ATC-CGT-T-ACAAGAGCGGTT 147
||||||| ||||||| ||| || || | | | ||| || | |||||||| |||
Sbjct 196 GGATCAGAGGGTCTAAAAACGATAGGAAAATCATTGACATCAGGTGTGACAAGAGCTGTT 255
Query 148 TTTCCAGAAGACT-TAAGAATAACAGAGAAGAAAATCTTTGATCCTCAAGACAAAACACT 206
|| || ||||| | ||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 256 TTCCCTGAAGA-TCTAAGAGTATCTGAGAAGAAAATCTTTGATCCTCAAGACAAAACACT 314
Query 207 TCTCGTATGGAACAGATTGTTCGTCATTTCGTGTATT-TTAGCTGTCTCTGTTGATCCTT 265
| | ||||||||||| |||| || || || || ||| || || |||||||||||||||
Sbjct 315 TTTATTATGGAACAGAATGTTTGTTATCTCTTGCATTCTT-GCGGTCTCTGTTGATCCTC 373
Query 266 TGTTCTTCTATCTTCCCATTGTCGATAATTCCGGAAGCAGCTGTATAGGGATTGA-TACG 324
|||| |||||||| || ||||||||||| || ||| | ||| || || || || | |
Sbjct 374 TGTTTTTCTATCTACCGATTGTCGATAACTCA--AAGAA-CTGCATTGGAATCGACT-CT 429
Query 325 AAACTAGCTGTTACAACGACGACTCTTAGAACCATTGTTGACGTTTTTTA-CTTAACTAG 383
||| ||||||| ||||| || ||||| ||||| || | || |||||||| |||| | |
Sbjct 430 AAATTAGCTGTGACAACTACTACTCTAAGAACGATCATCGATGTTTTTTATCTTA-CGCG 488
Query 384 AATGGCTCTTCAGTTTCGTACAGCTTATATAGCTCCTTCTTCTCGTGTGTTTGGTCGTGG 443
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct 489 AATGGCTCTTCAGTTTCGTACAGCTTATATTGCTCCTTCTTCTCGTGTGTTTGGAAGAGG 548
Query 444 TGAGCTTGTGATTGATCCTGCAAAGATCGCTGAACGCTATTTAACCCGTTATTTCGTCGT 503
|||||||||||| || ||||||||||| |||||||| ||||| || || |||||| | ||
Sbjct 549 TGAGCTTGTGATCGACCCTGCAAAGATTGCTGAACGGTATTTGACTCGCTATTTCATTGT 608
Query 504 CGATTTTCTTGCAGTGCTGCCTTTACCGCAGATTGCAGTGTGGAAGTTTCTTCACGGGTC 563
|||||| || || || || || ||||| |||||||| |||||||||||||||||||| ||
Sbjct 609 CGATTTCCTCGCGGTTCTTCCCTTACCTCAGATTGCGGTGTGGAAGTTTCTTCACGGATC 668
Query 564 TAAAGGATCGGATGTGTTACCAACGAAAAC-GGCATTGTTGA-ACATTGTAATTGTGCAG 621
||||||| | ||||| |||||||| ||||| ||| | || | ||||||| || |||
Sbjct 669 TAAAGGAACAGATGTATTACCAAC-AAAACAGGCGCTATT-ACACATTGTCATCACACAG 726
Query 622 TATATTCCGAGATTCGTGAGGTTTATTCCGTTAACATCAGAGTTGAAGAAAACTGCAGGA 681
|| || || |||||||| ||||||||||| |||||||| ||| | |||||||| ||||||
Sbjct 727 TACATACCAAGATTCGTTAGGTTTATTCCATTAACATCGGAGCTCAAGAAAACAGCAGGA 786
Query 682 GCTTTTGCCGAAGGAGCTTGGGCTGGTGCTGCTTATTATCTTCTCTGGTATATGCTTGCA 741
||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 787 GCTTTCGCTGAAGGTGCTTGGGCTGGTGCTGCTTATTACCTCCTCTGGTATATGCTTGCA 846
Query 742 AGCCACATAACTGGAGCGTTTTGGTACATGTTGTCAGTGGAGCGTAACGATACTTG-TTG 800
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || |||
Sbjct 847 AGCCACATTACTGGAGCGTTCTGGTACATGTTGTCAGTGGAACGTAACGATACATGCTTG 906
Query 801 GAGATTTGCGTGTAAAGTTCAGCCAGATCCGCGAC-TCTGTGTTCAGATTCTGTATTGTG 859
|||| || |||||||| ||||| ||||| | | | ||||||||||||||||||||||
Sbjct 907 -AGATCCGCTTGTAAAGTCCAGCCTGATCC-CAAGGTTTGTGTTCAGATTCTGTATTGTG 964
Query 860 GGA-CTAAATTTGTGAGCAGTGGAGAAACTGAATGGATCAAAACAGTCCCTGAGCTTCTT 918
| | | ||||| |||||||| | || || || ||||||||| |||||||||| ||| ||
Sbjct 965 GCAGC-AAATTAATGAGCAGTCGCGACACCGACTGGATCAAATCAGTCCCTGATCTT-TT 1022
Query 919 -AAGAGCAATTGTTCTGCTAAA-GCAGATGATTC-AAAGTTTAACTATGGGATATACGGT 975
|||| |||||||||||| ||| || ||||| || ||| || || || || || || |
Sbjct 1023 CAAGAACAATTGTTCTGCGAAAAGC-GATGAGTCCAAA-TTCAATTACGGAATCTATAGC 1080
Query 976 CAGGCTATATCTTCAGGCATTGTATCATCAACAACATTTTTCTCCAAGTTCTGTTATTGT 1035
|||||| | ||||| || |||||||| || ||||| |||||||||||||| |||||||||
Sbjct 1081 CAGGCTGTGTCTTCTGGAATTGTATCTTCGACAACGTTTTTCTCCAAGTTTTGTTATTGT 1140
Query 1036 CTATGGTGGGGTCTTCAAAATCTCAGCACGTTAGGTCAAGGGCTGCAGACAAGTACATTT 1095
|| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||| | |
Sbjct 1141 CTTTGGTGGGGTCTCCAAAATCTCAGTACGTTAGGTCAAGGGCTGCAAACAAGTACCTAT 1200
Query 1096 CCAGGAGAGGTTTTGTTTTCCATTGCGATTGCTATAGCTGGGCTTCTTCTT-TTCGCGCT 1154
|||||||| ||||||||||| ||||| |||||| |||| || ||||| ||| || || ||
Sbjct 1201 CCAGGAGAAGTTTTGTTTTCAATTGCAATTGCTGTAGCCGGACTTCT-CTTGTTTGCTCT 1259
Query 1155 TCTCATCGGGAATATGCAGACTTATCTTCAGTCACTTACTGTTCGTCTCGAGGAAATGAG 1214
|||||||||||||||||| |||||||| ||||||||||| |||||| | |||||||||||
Sbjct 1260 TCTCATCGGGAATATGCAAACTTATCTGCAGTCACTTACGGTTCGTTTAGAGGAAATGAG 1319
Query 1215 GATCAAAAGACGTGACTCAGAACAGTGGATGCATCACAGGTCACTTCCACAAAATTTGAG 1274
||| |||||||| || || ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1320 GATTAAAAGACGCGATTCCGAACAGTGGATGCATCACAGGTCACTTCCACAAAACCTGAG 1379
Query 1275 GGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGAGGTGTAGACGAAGA 1334
|||| |||||||||| ||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 1380 GGAACGAGTCAGACGTTATGATCAATACAAATGGTTAGAAACAAGAGGAGTCGACGAAGA 1439
Query 1335 AAACATAGTTCAGAGTTTACCTAAGGATCTCAGAAGAGACATCAAACGCCATCTCTGTCT 1394
||||||||| ||||||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct 1440 AAACATAGTCCAGAGTTTACCAAAAGATCTTAGAAGAGACATCAAACGCCATCTCTGTCT 1499
Query 1395 GAATTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGGATGAAAGATTACTTGACGCAAT 1454
||| |||||| | ||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct 1500 GAACTTAGTTCGCAGGGTTCCTCTGTTTGCTAATATGGATGAGAGACTACTAGACGCAAT 1559
Query 1455 CTGTGAGAGATTAAAGCCGAGTCTTTTCACGGAAAGCACTTACATTGTGCGTGAAGGAGA 1514
||||||||| ||||||| ||||| | ||| || ||||||||||| ||||| ||||||||
Sbjct 1560 ATGTGAGAGACTAAAGCCAAGTCTATACACAGAGAGCACTTACATAGTGCGAGAAGGAGA 1619
Query 1515 CCCCGTTAACGAAATGATGTTCATAATCCGAGGCCGGTTAGAAAGTGTAACAACAGATGG 1574
||| |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1620 CCCGGTTAACGAAATGCTGTTCATAATCCGAGGCCGGTTAGAGAGTGTAACGACAGATGG 1679
Query 1575 GGGAAGAAGCGGTTTCTTCAACAGAGGGTTGTTAAAAGAAGGAGACTTTTGTGGTGAAGA 1634
|||||||| |||||||| |||||||| || || |||||||| |||||||||||||||||
Sbjct 1680 TGGAAGAAGTGGTTTCTTTAACAGAGGTTTATTGAAAGAAGGCGACTTTTGTGGTGAAGA 1739
Query 1635 GCTTCTGACATGGGCTCTTGACCCTAAAGCAGGCTCAAACTTACCTTCTTCCACAAGAAC 1694
||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1740 GCTTCTGACTTGGGCACTTGACCCTAAAGCAGGCTCAAACTTGCCTTCTTCCACAAGAAC 1799
Query 1695 AGTGAAGGCTCTGACTGAAGTAGAGGCTTTCGCTCTT-GAAGCTGAAGAGCTGAAGTTTG 1753
|||||||||||| ||||||||||||||||||||| || |||||||||||||| || ||||
Sbjct 1800 AGTGAAGGCTCTAACTGAAGTAGAGGCTTTCGCT-TTAGAAGCTGAAGAGCTCAAATTTG 1858
Query 1754 TAGCAAGTCAGTTTAGGAGACTTCATAGTCGACAGGTTCAACAAACATTTAGGTTTTACT 1813
| || |||||||| ||| | ||||| ||||| || || |||||||| || ||||||||||
Sbjct 1859 TGGCTAGTCAGTTCAGGCGTCTTCACAGTCGTCAAGTCCAACAAACGTTCAGGTTTTACT 1918
Query 1814 CTCAGCAATGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGGCGTCG-CTA-TTC 1871
|||| |||||||| ||||||||| |||| || |||||||| ||||||||| | | | ||
Sbjct 1919 CTCAACAATGGAGGACTTGGGCTGCTTGTTTTATCCAAGCCGCTTGGCGTAGAC-ACTT- 1976
Query 1872 AAGAAGGAAAAACGCTGAA-TTGAGACGGATTGAAGAAAAAGAAGAAGAATTGGGTTATG 1930
||||||||||| ||| || || ||||| | ||||| ||||||||||| ||| |||||
Sbjct 1977 AAGAAGGAAAATCGCAGAGCTT-AGACGTA---AAGAAGAAGAAGAAGAAATGGATTATG 2032
Query 1931 AAGATGAATATGA-TGATGA-GAGTGACAAGAG-GCCTATGGTTATCACAAGAAGTGA-- 1985
||||||| || || | |||| || | | | | | | | |||||| || | || ||||
Sbjct 2033 AAGATGATTACGAGT-ATGATGA-TAATATGGGTGG-TGTGGTTA-CA-AGGA-GTGATA 2086
Query 1986 GT-CT--T----C---TTCTAGACTGCGTTCAACGATATTTGCATCAAGATTTGCTGCTA 2035
|| || | | ||||||| | ||||| ||| ||||||||||||||||||||||||
Sbjct 2087 GTTCTGCTGGATCAAGTTCTAGATTACGTTCCACGGTATTTGCATCAAGATTTGCTGCTA 2146
Query 2036 ATGCA-TTGAAAGGG-CACA-GACTTAGGAG-CTCAGAGAGTTCAAAGACCTTGATAAAT 2091
| || || || ||| || | | || ||| | ||| ||||||||||||| ||| | |||
Sbjct 2147 ACGCGCTT-AA-GGGTCATAAG-CTAAGG-GTCTCCGAGAGTTCAAAGAGTTTGGTGAAT 2202
Query 2092 CTGCA-AAAGCC-TCCGGAACCTGATTTTGATGCT 2124
|| | |||||| || | |||||||||| || |||
Sbjct 2203 CTA-AGAAAGCCATCAG-AACCTGATTTCGAGGCT 2235
> Ahg895426 jgi|Araly1|895426|Al_scaffold_0006_3422
Length=930
Score = 800 bits (433), Expect = 0.0
Identities = 596/670 (89%), Gaps = 29/670 (4%)
Strand=Plus/Plus
Query 1037 TATGGTGGGGTCTTCAAAATCTCAGCACGTTAGGTCAAGGGCTGCAGACAAGTACATTTC 1096
||| ||||| |||||||||||||||| | |||| |||||||||||| |||||||||||||
Sbjct 276 TATTGTGGGATCTTCAAAATCTCAGCGCCTTAGTTCAAGGGCTGCAAACAAGTACATTTC 335
Query 1097 CAGGAGAGGTTTTGTTTTCCATTGCGATT-GCTATAGCTGGGCTTCTTCTTTTCGCGCTT 1155
||||||||||||||||||||| ||| || | | | ||| |||||| ||||||||||
Sbjct 336 CAGGAGAGGTTTTGTTTTCCAGCGCG-TTAGGT-CA--AGGGTTTCTTC-TTTCGCGCTT 390
Query 1156 CTCA-TCGGGAATATGCAGAC--TT-ATCTTCAGTCACTTACTGTTCGTCTCGAGGAAAT 1211
|| | |||||||||||| || || |||||| | ||||||||||||||||||||||||
Sbjct 391 CT-ACTCGGGAATATGCTTACTGTTCGTCTTCATTTACTTACTGTTCGTCTCGAGGAAAT 449
Query 1212 GAGGATCAAAAGACGTGACTCAGAACAGTGGATGCATCACAGGTCACTTCCACAAAATTT 1271
||||||||||||| ||||||| ||||| | | |||||||||||||||||||||||||
Sbjct 450 GAGGATCAAAAGATGTGACTCGGAACA---G-T--ATCACAGGTCACTTCCACAAAATTT 503
Query 1272 GAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGAGGTGT-AGACG 1330
||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | |
Sbjct 504 GAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACCAGAGGTGTTA-AGG 562
Query 1331 AAGAAAACATAGTTCAGAGTTTACCTAAGGATCTCAGAAGAGACATCAAACGCCATCTCT 1390
||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||| |
Sbjct 563 AAGAAAATTTAGTTCAGAGTTTAGCTACGGATCTCAGAAGAGACATCAAACGTCATCTTT 622
Query 1391 GTCTGAATTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGGATGAAAGATTACTTGACG 1450
| |||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 623 GCCTGAGTTTAGTTAGGAGGGTTCCTCTGTTTGCTAATATGAATGAAAGATTACTCGAC- 681
Query 1451 CAATCTGTGAGAGATTAAAGCCGAGTCTTTTCACGGAAAGCACTTACATTGTGCGTGAAG 1510
|| |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct 682 -AA-CTGTGAGAGATTAAAGCCGAGTCTTTACAAGGAAAGCACTTTCATTGTGCGTGAAG 739
Query 1511 GAGACCCCGTTAACGAAATGATGTTCATAATCCGAGGCCGGTTAGAAAGTGTAACAAC-A 1569
|| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||| | |
Sbjct 740 GAAACCCGGTTAATGAAATGATGTTCATAATCCGAGGCCGGTTAGAGAGTGTAACA-CTA 798
Query 1570 GATGGGGGAAGAAGCGGTTTCTTCAACAGAGGGTTGTTA---AAAGAAGGAGACTTTTGT 1626
||||| ||||||||| ||||||| ||||||||||| || ||||||||||||||||||
Sbjct 799 GATGGAGGAAGAAGCTGTTTCTTTAACAGAGGGTTAATATTGAAAGAAGGAGACTTTTGT 858
Query 1627 GGTGA-AGAGCTTCTGACATGGGCTCTTGACCCTAAAGCAGGCTCAAACTTACCTTCTTC 1685
||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 859 GGTGATA-AGCTTCTGACATGGGCTCTTGACCTTAAAGCAGGCTCAATCTTACCTTCTTC 917
Query 1686 CACAAGAACA 1695
||||||||||
Sbjct 918 CACAAGAACA 927
Score = 298 bits (161), Expect = 1e-79
Identities = 194/210 (92%), Gaps = 1/210 (0%)
Strand=Plus/Plus
Query 653 TAACATCAGAGTTGAAGAAAACTGCAGGAGCTTTTGCCGAAGGAGCTTGGGCTGGTGCTG 712
||||||| || |||||||||||| |||||| |||||| | ||||||||||||||||||||
Sbjct 77 TAACATCCGAATTGAAGAAAACTACAGGAGATTTTGCTGTAGGAGCTTGGGCTGGTGCTG 136
Query 713 CTTATTATCTTCTCTGGTATATGCTTGCAAGCCACATAACTGGAGCGTTTTGGTACATGT 772
| ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 137 CCCATTATCTCCTCTGGTATATGCTTGCAAGCCACATAACTGGAGCATTCTGGTACATGT 196
Query 773 TGTCAGTGGAGCGTAACGATACTTGTTGGAGATTTGCGTGTAAAGTTCAGCCAGATCCGC 832
||| |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 197 TGTTAGTGGAACGTAATGATACTTGTTGGAGATTTGCGTGT-AAGTTCAGCCAGATCCGT 255
Query 833 GACTCTGTGTTCAGATTCTGTATTGTGGGA 862
||||||||||||||||||||||||||||||
Sbjct 256 GACTCTGTGTTCAGATTCTGTATTGTGGGA 285
> Ahg947478 jgi|Araly1|947478|scaffold_703707.1
Length=866
Score = 488 bits (264), Expect = 6e-137
Identities = 429/501 (86%), Gaps = 42/501 (8%)
Strand=Plus/Plus
Query 913 CTTCTTAAGAGCAATTGTTCTGCTAAAGCAGATGATTCAAAGTTTAACTATGGGATATAC 972
||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 219 CTTCTCAAGAGCAATTGTTCTGCTAAAGGAGATGATTCAAAGTTTAACTTTGGGATATAC 278
Query 973 GGTCAGGCTATATCTTCAGGCATTGTATCATCAACAACATTTTTCTCCAAGTTCTGTTAT 1032
||||| |||||||||| | | | || || | ||||||||||||||||||
Sbjct 279 GGTCAAGCTATATCTT----C-----A--A--AA-AA-A---TTCTCCAAGTTCTGTTAT 320
Query 1033 TGTCTATGGTGGGGTCTTCAAAATCTCAGCACGTTAGGTCAAGGGCTGCAGACAAGTACA 1092
||| |||||||| || |||||||||| | ||||||||||||||| |||||||||
Sbjct 321 TGTATATGGTGGAGTTTTCAAAATCT-----C---AGGTCAAGGGCTGCAAACAAGTACA 372
Query 1093 TTTCCAGGAGAGGTTTTGTTTTCCATTGCGATT-GCTATAGCTGGGCTTCTTCTTTTCGC 1151
||||||||||||||||||||||||| ||| || | | | ||| |||||| ||||||
Sbjct 373 TTTCCAGGAGAGGTTTTGTTTTCCAGCGCG-TTAGGT-CA--AGGGTTTCTTC-TTTCGC 427
Query 1152 GCTTCTCA-TCGGGAATATGCAGACTTATCTTCAGTCACTTACTGTTCGTCTCGAGGAAA 1210
|||||| | |||||||||||||||| |||||||| | |||||||||||||||||| ||||
Sbjct 428 GCTTCT-ACTCGGGAATATGCAGACCTATCTTCATTTACTTACTGTTCGTCTCGACGAAA 486
Query 1211 TGAGGATCAAAAGACGTGACTCAGAACAGTGGATGCATCACAGGTCACTTCCACAAAATT 1270
|||||||||||||| ||||||| ||||| | | ||||||||||||||||||||||||
Sbjct 487 TGAGGATCAAAAGATGTGACTCGGAACA---G-T--ATCACAGGTCACTTCCACAAAATT 540
Query 1271 TGAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACAAGAGGTGT-AGAC 1329
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |
Sbjct 541 TGAGGGAAAGAGTCAGACGCTATGATCAATACAAATGGTTAGAGACCAGAGGTGTTA-AG 599
Query 1330 GAAGAAAACATAGTTCAGAGTTTACCTAAGGATCTCAGAAGAGACATCAAACGCCATCTC 1389
|||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct 600 GAAGAAAATTTAGTTCAGAGTTTAGCTACGGATCTCAGAAGAGACATCAAACGTCATCTT 659
Query 1390 TGTCTGAATTTAGTTAGGAGG 1410
|| |||| |||||||||||||
Sbjct 660 TGCCTGAGTTTAGTTAGGAGG 680
> Ahg320206 jgi|Araly1|320206|fgenesh1_pm.C_scaffold_4000263
Length=2241
Score = 460 bits (249), Expect = 1e-128
Identities = 678/879 (77%), Gaps = 53/879 (6%)
Strand=Plus/Plus
Query 1008 AACATTTTTCTCCAAGTTC-TGTTATTGTCTATGGTGGGGTCTTCAAAATCTCAG--CAC 1064
||| ||| |||| |||| | | || ||| | |||||||| || || ||||| || |||
Sbjct 1129 AAC-TTTGTCTCTAAGTACTTCTT-CTGTTTGTGGTGGGGACTACAGAATCTTAGTACAC 1186
Query 1065 GTTAGGTCAAGGGC-TGCAGACAAGTACATTTCCAGGAGAGGTTTTGTTTTCCATTGCGA 1123
|| |||||||||| || | || || |||| || ||||||||| | || || || | |
Sbjct 1187 -TT-GGTCAAGGGCTTG-AAACCAGCACATACCCTGGAGAGGTTATATTCTCTATAAC-A 1242
Query 1124 -TTGCTATAGCTGGGCTTCTTCT-TTTCGCGCTTCTCATCGGGAATATGCAGACTTATCT 1181
||||||| ||||| ||||| || ||| || |||||||| || || ||||||||||||||
Sbjct 1243 CTTGCTATTGCTGGACTTCTACTCTTT-GCACTTCTCATTGGAAACATGCAGACTTATCT 1301
Query 1182 TCAGTCACTTACTGTTC-GTCTCGAGGAAATGAGGA-TCAAAAGACGTGACTCAGAACAG 1239
||| || ||||| | | || | || |||||| || |||||||||||||||||||||||
Sbjct 1302 TCAATCGCTTACCATCCGGT-TAGAAGAAATG-CGAGTCAAAAGACGTGACTCAGAACAG 1359
Query 1240 TGGATGCATCA-C-AGGTCACTTCCACAA-AATTTGAGGGAAAGAGTCAGACGCTATGAT 1296
||||||| ||| | | | ||||||| | || | | ||||| | || ||||| ||||||
Sbjct 1360 TGGATGCGTCATCGAA-TG-CTTCCACCAGAACT-GCGGGAACGGGTTAGACGATATGAT 1416
Query 1297 CAATACAAATGGTTAGAGACAAGAGGTGTAGACGAAGAAAA-CATAGTTCAGAGTTTACC 1355
|| ||||| ||||| ||||| | || || || ||||| || | | ||||||| | ||
Sbjct 1417 CAGTACAAGTGGTTGGAGACGCGTGGCGTTGATGAAGAGAATCTT-GTTCAGAACCTCCC 1475
Query 1356 TAAGGATCTCAGAAGAGACATCAAACGCCATCTCTGTCT-GAATTTAGTTAGGAGGGTTC 1414
|||||||| |||||||| |||||||| ||||||||||| | || ||| | || ||||
Sbjct 1476 AAAGGATCTTAGAAGAGATATCAAACGTCATCTCTGTCTCGCCTT-AGTCCGAAGAGTTC 1534
Query 1415 C-TCTGTTTGCTAATATGGATGAAAGATTACTTGACGCAATCTGTGAGAGA-TTAAAGCC 1472
| | |||||| ||||||||||| || | || || |||||||||||||| |||| |||
Sbjct 1535 CAT-TGTTTGAGAATATGGATGAGAGGCTGCTAGATGCAATCTGTGAGAGGCTTAA-GCC 1592
Query 1473 GA-GTCTTTTCACGGA-AAGCACTTACATTG-TGCGTGAAGGAGACCCCGTTAACGAAAT 1529
| |||| ||||| || ||| ||||| ||| | ||||| ||||| || || || |||||
Sbjct 1593 -ATGTCTGTTCACTGAGAAGT-CTTAC-TTGGTTCGTGAGGGAGATCCAGTCAATGAAAT 1649
Query 1530 GATGTTCATAATCCGAGGCCGGTTAGAAAGTGTAACAACAGATGG-GGGAAGAAGCGGTT 1588
| | |||||||| || || || | || |||||||| || ||||| |||| ||||||| |
Sbjct 1650 GCTCTTCATAATTCGTGGTAGGCTCGAGAGTGTAACCACTGATGGTGGGA-GAAGCGGAT 1708
Query 1589 TCTTCAACAGAGGGTT-G-TTAAAAGAAGGAGACTTT-TGTGGTGAAGAGCTTCTGACAT 1645
||| |||| | | ||| | ||||| |||||||| ||| || ||||| |||||| ||||||
Sbjct 1709 TCTACAACCG-GAGTTTGCTTAAA-GAAGGAGA-TTTCTGCGGTGACGAGCTTTTGACAT 1765
Query 1646 GGGCTCTTGA-CCCTAAAGCAGGCTCAAACTTACCTTCTTCCACAAGAACAGTGAAGGCT 1704
|||| ||||| ||| ||| | || || ||| | || || || |||||||| ||||||||
Sbjct 1766 GGGCGCTTGATCCC-AAATCCGGTTCTAACCTCCCGTCCTCAACAAGAACCGTGAAGGC- 1823
Query 1705 CTGA-CTGAAGTAGAGGCTTTCGCTCTTGA-AGCTGAAGAGCTGAAGTTTGTAGCAAGTC 1762
|| | | |||||||| ||||||||||| || ||| || |||||||| || || || || |
Sbjct 1824 CTTAACAGAAGTAGAAGCTTTCGCTCT-GATAGCCGATGAGCTGAAATTCGTGGCGAGCC 1882
Query 1763 AGTTTAGGAGACTTCATAGTC-GACAGGTTCAACAAACATTTAGGTTTTACTCTCAGCAA 1821
|||| || ||||| ||||| | |||| || ||||| || || || || || || ||||||
Sbjct 1883 AGTTCAGAAGACTCCATAG-CAGACAAGTACAACACACGTTCAGATTCTATTCACAGCAA 1941
Query 1822 TGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGG 1860
||||| |||||||| |||||||||| ||||| || |||
Sbjct 1942 TGGAGGACTTGGGCCGCTTGCTTCATGCAAGCCGCATGG 1980
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80141875480
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5