BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G17750.1 Length=3379 Score E Sequences producing significant alignments: (Bits) Value Ahg471987 jgi|Araly1|471987|fgenesh2_kg.1__1941__AT1G17750.1 5166 0.0 Ahg908919 jgi|Araly1|908919|Al_scaffold_0002_2000 632 4e-180 Ahg905907 jgi|Araly1|905907|Al_scaffold_0003_3035 52.8 2e-05 > Ahg471987 jgi|Araly1|471987|fgenesh2_kg.1__1941__AT1G17750.1 Length=3355 Score = 5166 bits (2797), Expect = 0.0 Identities = 3184/3372 (94%), Gaps = 22/3372 (1%) Strand=Plus/Plus Query 1 ATGAGGAATCTTGGGTTACTCGAAATTACTCTGCTTTGCTCTCTCTTTGTCTATTTCCGT 60 ||||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||| Sbjct 1 ATGAGGAATCTTGGGTTTGTCGAAATTGCTCTGCTTTCCTCTCTCTTTGTCCATTTCCGT 60 Query 61 ATAGATTCTGTCT-CTAGTTTAAACTCAGATGGTTTGGCTTTACTCTCGCTTCTCAAGCA 119 ||||||||||||| || |||||||||||||||| ||||||||||||||||||| || || Sbjct 61 ATAGATTCTGTCTCCT-CTTTAAACTCAGATGGTATGGCTTTACTCTCGCTTCTTAACCA 119 Query 120 CTTTGATAAAGTCCCACTTGAAGTAGCTTCGACGTGGAAGGAGAACACATCTGAAACCAC 179 ||||||||| ||||||||||||||| ||||||| |||||| | ||||||||| ||||||| Sbjct 120 CTTTGATAACGTCCCACTTGAAGTAACTTCGACATGGAAGAATAACACATCTCAAACCAC 179 Query 180 TCCATGTAATAATAACTGGTTTGGTGTCATTTGTGATCTTTCTGGTAATGTCGTCGAGAC 239 ||| ||| |||||||||||||||||||||||||||||| |||||||| | |||||||| Sbjct 180 TCCCTGTGATAATAACTGGTTTGGTGTCATTTGTGATCACTCTGGTAA--T-GTCGAGAC 236 Query 240 CCTTAATTTGTCTGCTTCTGGGCTTTCAGGCCAATTAGGTTCTGAAATTGGGGAGCTTAA 299 |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 237 CCTTAATTTGAGTGCTTCTGGGCTTTCAGGCCAATTAAGTTCTGAAATTGGGGAGCTTAA 296 Query 300 GAGCTTGGTCACATTGGATCTCAGTCTTAACAGTTTCTCTGGTTTATTGCCTTCCACTTT 359 |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 297 GAGCTTGGTCACTTTGGATCTCAGTCTTAACACTTTCTCTGGTTTATTGCCTTCCACTTT 356 Query 360 AGGAAACTGTACTTCACTTGAGTATTTGGATTTGTCTAACAATGATTTTTCTGGAGAAG- 418 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 357 AGGAAACTGTACTTCACTTGAGTATTTGGATTTGTCTAACAATGGCTTTTCTGGAG-AGA 415 Query 419 TTCCTGATATTTTTGGTAGCTTGCAGAATTTGACGTTTCTGTATCTTGATCGCAATAATC 478 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 416 TTCCTGATATTTTTGGTAGCTTGCAGAATTTGACGTTTCTGTATCTTGATCGTAATAATC 475 Query 479 TTAGTGGTCTCATTCCTGCAAGTGTTGGTGGGTTGATAGAGCTCGTAGATCTGAGGATGT 538 |||||||||| |||||||||||| ||||| |||||||||| ||||||||||||||| ||| Sbjct 476 TTAGTGGTCTGATTCCTGCAAGTATTGGTCGGTTGATAGACCTCGTAGATCTGAGGTTGT 535 Query 539 CATATAATAACTTGTCTGGTACCATTCCAGAGTTGCTTGGGAACTGTAGTAAGCTGGAAT 598 | |||||||||||||||||||||||||| |||| | |||||||||| | ||||||||||| Sbjct 536 CTTATAATAACTTGTCTGGTACCATTCCTGAGTCGATTGGGAACTGCACTAAGCTGGAAT 595 Query 599 ATCTGGCTTTGAACAACAACAAGTTAAATGGTTCTTTGCCAGCAAGTCTCTATCTACTCG 658 || |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| | Sbjct 596 ATATGGCTTTGAACAACAACATGTTTGATGGTTCTTTGCCAGCAAGTCTCAATCTACTTG 655 Query 659 AGAATCTTGGTGAGCTATTTGTCAGTAACAACAGCCTTGGAGGGAGGCTTCATTTTGGTT 718 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 656 AGAATCTTGGTGAGTTGTTTGTCAGTAACAACAGCCTTGGAGGGAGGCTTCATTTTGGTT 715 Query 719 CTAGCAACTGCAAGAAATTGGTTTCTTTAGATCTCTCGTTCAATGATTTCCAAGGCGGTG 778 |||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||| | Sbjct 716 CTAGCAACTGCAAGAAGTTGGTGACGTTAGATCTGTCGTTCAATGATTTCCAAGGCGGAG 775 Query 779 TTCCACCTGAGATAGGCAACTGCAGTAGCCTTCACTCTTTAGTCATGGTGAAATGCAACT 838 |||||||||| || ||||| |||| ||| |||||||||||| |||||||||||||||||| Sbjct 776 TTCCACCTGAAATTGGCAAGTGCACTAGTCTTCACTCTTTACTCATGGTGAAATGCAACT 835 Query 839 TGACAGGTACAATCCCATCATCAATGGGTATGTTGAGAAAGGTTTCGGTTATTGACCTTT 898 |||||||||||||||||||||| ||||| |||| | |||||||||| |||||||||||| Sbjct 836 TGACAGGTACAATCCCATCATCCTTGGGTTTGTTAAAAAAGGTTTCGCTTATTGACCTTT 895 Query 899 CCGATAATCGTCTCTCGGGGAATATCCCTCAAGAGCTTGGGAACTGCAGCAGCTTGGAAA 958 ||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 896 CCGGGAATGGTCTCTCCGGGAATATACCTCAAGAGCTTGGGAACTGCAGCAGCTTGGAAA 955 Query 959 CCTTGAAGCTGAACGACAACCAGCTCCAAGGCGAGATACCACCTGCATTGAGTAAGCTAA 1018 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| Sbjct 956 CCTTGAAGCTGAACGACAACCAGCTCCAAGGCGAGTTACCACCTGCATTGGGTATGCTAA 1015 Query 1019 AGAAGCTACAAAGCCTGGAGCttttttttAATAAGCTGTCCGGTGAGATTCCTATTGGCA 1078 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1016 AGAAGCTACAAAGCCTGGAGCTTTTTGTTAATAAGCTGTCCGGTGAGATTCCTATTGGCA 1075 Query 1079 TATGGAAGATTCAGAGTCTGACACAGATGCTCGTTTATAACAACACTCTCACCGGGGAAC 1138 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1076 TATGGAAGATTCAGAGTCTGACACAGATGCTCATTTATAACAACACTGTCACCGGGGAAC 1135 Query 1139 TACCAGTTGAAGTAACTCAGCTGAAGCACCTTAAGAAGCTTACACTGTTTAACAACGGCT 1198 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct 1136 TACCAGTTGAAGTAACTCAGCTGAAGCACCTTAAGAAGCTTACGCTTTTTAACAACAGCT 1195 Query 1199 TTTATGGAGATATACCAATGAGTTTAGGCCTGAATCGAAGCTTAGAGGAGGTGGACCTTC 1258 |||||||| | |||||||||||||||||| |||||| ||||||||||||| ||||| ||| Sbjct 1196 TTTATGGACAGATACCAATGAGTTTAGGCATGAATCAAAGCTTAGAGGAGATGGACTTTC 1255 Query 1259 TTGGTAACCGTTTTACAGGGGAGATACCACCCCATCTCTGCCATGGACAGAAGTTGAGAT 1318 |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| Sbjct 1256 TTGGTAACCGTTTTACCGGGGAGATACCACCCAATCTCTGCCATGGACACAAGTTGAGAA 1315 Query 1319 TGTTCATCTTGGGTTCTAATCAGCTTCATGGTAAGATACCAGCGTCTATTCGTCAGTGTA 1378 | |||||||||||||||||||||||||||||||| || ||||||||||||| |||||||| Sbjct 1316 TATTCATCTTGGGTTCTAATCAGCTTCATGGTAATATTCCAGCGTCTATTCATCAGTGTA 1375 Query 1379 AGACCCTTGAGCGAGTCAGACTTGAAGATAACAAACTTTCAGGTGTTCTTCCGGAATTCC 1438 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1376 AGACCCTTGAGAGAGTCAGACTTGAAGATAACAAACTTTCAGGTGTTTTTCCGGAATTCC 1435 Query 1439 CTGAGAGTCTTAGTCTTTCCTATGTGAACCTCGGAAGCAATAGCTTTGAAGGATCCATCC 1498 || ||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 1436 CT--GAG----AGTCTTTCCTATGTGAACCTCGGAAGCAACAGCTTTGAAGGGTCCATCC 1489 Query 1499 CGCGCAGCTTGGGAAGCTGTAAAAATCTCTTGACTATTGACCTTTCTCAAAACAAACTCA 1558 ||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 1490 CGCACAGCTTGGGAAGCTGTAAAAATCTCTTGACCATTGACCTTTCTCGAAACAAACTCA 1549 Query 1559 CGGGTCTGATACCTCCAGAACTGGGAAATCTGCAAAGCCTTGGACTGTTGAACCTTTCAC 1618 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct 1550 CGGGTCTGATACCTCCAGAACTGGGAAATCTGCAAAGCCTTGGACAGTTGAATCTTTCAC 1609 Query 1619 ATAATTATCTGGAAGGTCCTCTGCCATCCCAGCTATCAGGCTGTGCGAGACTTCTGTATT 1678 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1610 ATAATCATCTGGAAGGTCCTCTGCCATCCCAGCTATCAGGCTGTGCGAGACTTCTGTATT 1669 Query 1679 TTGATGTTGGATCCAACTCATTGAACGGTTCTATTCCATCAAGCTTCAGAAGCTGGAAAA 1738 |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct 1670 TTGATGTTGGGTCCAACTCATTGAACGGTTCTGTTCCATCGAGCTTCAGAAGCTGGAAAA 1729 Query 1739 GCTTGTCCACTTTAGTTCTCAGTGACAATAATTTTCTAGGAGCTATTCCACAGTTCTTGG 1798 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct 1730 GCTTGTCCACTTTAGTTCTCAGTGACAATAATTTTCTAGGAGCCATTCCACCGTTCTTGG 1789 Query 1799 CAGAGCTTGACCGACTCTCAGATCTGCGGATAGCTCGAAATGCTTTTGGAGGTAAGATTC 1858 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 1790 CAGAGCTTGACCGCCTCTCAGATCTGCGGATGGCTCGAAATGCTTTTGGAGGTGAGATTC 1849 Query 1859 CTTCCTCGGTTGGCTTGTTGAAGAGTCTACGCTATGGCTTAGACCTCAGTGCGAACGTAT 1918 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1850 CTTCCTCGGTTGGTTTGTTGAAGAGTCTACGCTATGGCTTAGACCTCAGTGGGAACGTAT 1909 Query 1919 TTACGGGTGAGATTCCAACCACACTGGGGGCTCTTATCAATCTTGAACGTCTCAACATAT 1978 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1910 TTACGGGTGAGATTCCAACCACACTGGGGGCTCTTATCAATCTTGAACGGCTCAACATAT 1969 Query 1979 CCAACAACAAGTTGACAGGGCCTTTATCGGTTCTTCAAAGTCTTAAGTCATTGAATCAAG 2038 |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| Sbjct 1970 CCAACAACAAGTTGACAGGGTCTTTATCGGCTCTTCAAAGTCTTAATTCATTGAATCAAG 2029 Query 2039 TTGACGTCTCGTATAATCAGTTCACGGGTCCAATACCCGTAAATCTGTTATCAAATTCTT 2098 ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 2030 TTGACGTCTCGTATAATCAGTTCACGGGTCCAATACCAGTAAATCTGATATCAAATTCTT 2089 Query 2099 CAAAGTTTTCTGGAAATCCAGACCTCTGCATTCAAGCTTCTTACTCAGTGAGTGCCATAA 2158 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2090 CAAAGTTTTCGGGAAATCCAGACCTCTGCATTCAACCTTCTTACTCAGTGAGTGCCATAA 2149 Query 2159 TCCGCAAAGAGTTTAAATCTTGCAAAGGTCAAGTCAAACTTAGCACGTGGAAGATCGCCC 2218 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2150 TCCGCAACGAGTTTAAATCTTGCAAAGGTCAAGTCAAACTTAGCACCTGGAAGATCGCCC 2209 Query 2219 TTATAGCAGCTGGGTCCTCACTATCCGTATTGGCTTTGCTTTTTGCTCTCTTTTTGGTTT 2278 |||||||||||| ||| || ||||||||| ||||||||||||||||| || ||||| ||| Sbjct 2210 TTATAGCAGCTGCGTCATCTCTATCCGTAGTGGCTTTGCTTTTTGCTATCGTTTTGTTTT 2269 Query 2279 TATGCCG-GTGCAAAAGAGGAACCAAGACAGAAGATGCTAATATCCTCGCAGAGGAAGGT 2337 | ||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2270 TTTGCCGCG-GCAAAAGAGGAGCCAAGACAGAAGATGCTAATATCCTCGCAGAGGAAGGT 2328 Query 2338 CTGTCCTTGTTGCTGAACAAAGTTCTAGCAGCCACTGACAATCTAGATGACAAGTACATC 2397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2329 CTGTCCTTGTTGCTGAACAAAGTTCTAGCAGCCACTGACAATCTAGATGACAAGTACATC 2388 Query 2398 ATTGGAAGAGGAGCTCATGGAGTTGTTTACAGAGCTTCTTTAGGATCAGGCGAAGAATAC 2457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2389 ATTGGAAGAGGAGCTCATGGAGTTGTTTACAGAGCTTCTTTAGGATCAGGCGAAGAATAC 2448 Query 2458 GCCGTGAAGAAACTCATCTTTGCGGAACACATTCGCGCAAACCAAAATATGAAGCGGGAG 2517 ||||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||||| Sbjct 2449 GCCGTGAAGAAACTCTTCTTTGCGGAACACATACGCGCAAACCGAAATATGAAGAGGGAG 2508 Query 2518 ATCGAAACAATCGGGCTAGTCAGGCACAGAAATCTCATTCGGTTAGAAAGATTTTGGATG 2577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2509 ATCGAAACAATCGGGCTAGTCAGGCACAGAAATCTCATTCGGTTAGAAAGATTTTGGATG 2568 Query 2578 AGGAAAGAAGATGGCTTAATGCTGTATCAGTACATGCCCAATGGAAGCCTACACGACGTT 2637 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2569 AGGAAAGAAGATGGCTTAATGCTGTATCAGTACATGCCCAAAGGAAGCCTACACGACGTT 2628 Query 2638 TTGCACAGAGGTAATCAAGGAGAAGCAGTTCTTGACTGGTCTGCACGGTTCAACATAGCC 2697 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2629 TTGCACAGAGGTAATCAAGGAGAAGCAGTTCTTGACTGGTCTGCACGGTTTAACATAGCC 2688 Query 2698 CTTGGGATTTCACATGGACTGGCGTATTTACATCATGATTGTCATCCACCAATAATTCAC 2757 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct 2689 CTTGGGATTTCACATGGACTGGCGTATCTACACCATGATTGTCATCCACCAATAATTCAC 2748 Query 2758 CGCGACATCAAACCAGAGAACATACTCATGGACTCGGATATGGAGCCTCACATTGGAGAT 2817 || |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 2749 CGTGACATCAAACCAGAGAACATACTCATGGACTCGGATTTAGAGCCTCACATTGGAGAT 2808 Query 2818 TTCGGATTGGCTCGGATTCTAGATGACTCAACAGTTTCAACGGCCACTGTTACTGGCACA 2877 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2809 TTCGGATTGGCTCGGATTCTAGATGACTCAACAGTTTCAACGGCCACCGTTACTGGCACA 2868 Query 2878 ACTGGGTACATTGCACCAGAAAATGCGTACAAGACGGTGAGGAGCAAGGAATCAGATGTT 2937 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2869 ACTGGGTACATTGCACCAGAAAATGCGTACAAGACGGTGAGGAGCAAGGAATCAGATGTT 2928 Query 2938 TACAGTTATGGAGTTGTTTTGCTCGAGCTGGTAACAGGAAAGAGAGCACTGGACAGATCT 2997 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2929 TACAGTTATGGAGTTGTTTTGCTCGAGCTGGTAACAGGAAAGAGAGCAGTGGACAGATCT 2988 Query 2998 TTCCCGGAAGATATCAACATTGTGAGCTGGGTCAGATCTGTATTAAGCAGCTACGAGGAT 3057 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 2989 TTCCCAGAAGATATCAATATTGTGAGCTGGGTCAGATCTGTATTAAGCAGCTATGAGGAT 3048 Query 3058 GAAGACGATACTGCTGGTCCAATCGTTGATCCAAAACTTGTGGATGAGCTTCTGGATACG 3117 ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 3049 GAAGATGATACTGTTGGTCCAATCGTTGATCCAACACTTGTGGATGAGCTTCTGGATACG 3108 Query 3118 AAGCTCAGGGAACAAGCAATCCAAGTCACAGACTTGGCTCTTAGATGTACAGACAAGAGG 3177 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3109 AAGCTCAGGGAACAAGCAATCCAAGTCACAGACTTGGCTCTTAGATGTACGGACAAGAGG 3168 Query 3178 CCGGAGAACAGACCATCGATGAGAGATGTGGTGAAAGATTTGACTGATTTGGAAAGTTTT 3237 |||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct 3169 CCGGGGAACAGACCATCCATGCGAGATGTGGTGAAAGATTTGACTGATTTAAAAAGTTTT 3228 Query 3238 GTAAGAAGCACTTCGGGTTCAGTTCACTAGTTTCATAAGTTGCAGGTTTATATAGTGT-A 3296 ||||| |||||| |||||||||||||||||||||| ||||||||||||||||| | | Sbjct 3229 GTAAG---CACTTCTGGTTCAGTTCACTAGTTTCATATTTTGCAGGTTTATATAGT-TCA 3284 Query 3297 CTGTTCTTTGAAACCACTAATATAATTGTAACTACCATTGAATA-CCGTGAAGATTTGAG 3355 | |||||||| ||| |||||| |||||||||| ||| |||| || || |||||||||||| Sbjct 3285 C-GTTCTTTGTAACTACTAATTTAATTGTAACCACCGTTGAGTAACCTTGAAGATTTGAG 3343 Query 3356 AAACATATATAT 3367 |||||||||||| Sbjct 3344 AAACATATATAT 3355 > Ahg908919 jgi|Araly1|908919|Al_scaffold_0002_2000 Length=3369 Score = 632 bits (342), Expect = 4e-180 Identities = 823/1049 (78%), Gaps = 58/1049 (6%) Strand=Plus/Plus Query 2197 CTTAGCACGTGG-AAGATCGCCCTTATAGCAG-CTGGGTCCTCACTATCCGTATTGGCTT 2254 |||||||| ||| || |||| |||||||| | || ||||| ||| ||| |||| || Sbjct 2290 CTTAGCACCTGGCAA-ATCGTGCTTATAGCGGTCT-TATCCTCTTTATTCGTCTTGG-TT 2346 Query 2255 -TGCTTTTTGCTCTCT-TTTTGGTTT---TATGCCGGT-GCAAAAGAGGAACCAAGACAG 2308 || || ||||||| | |||| ||| || | | || ||||| || | ||| ||| | Sbjct 2347 GTGGTTCTTGCTCT-TGTTTTCATTTGCCTACGTC-GTCGCAAAGGAAG-ACC-AGA-AA 2401 Query 2309 AAGATGCTAATATC--CTCGCA-GAGGAAGGTCTGTCCTTGTTGCTGAACAAAGTTCTAG 2365 |||||||| || || | | || |||||||| | || |||||| ||||||||||||| | Sbjct 2402 AAGATGCTTATGTCTTCACCCAGGAGGAAGGCCCATCTTTGTTGTTGAACAAAGTTCTTG 2461 Query 2366 CAGCCACTGACAATCTAGATGACAAGTACATCATTGGAAGAGGAGCTCATGGAGTTGTTT 2425 |||| |||||||||||| | || |||||||||||||||||||||||||| ||| |||| | Sbjct 2462 CAGCAACTGACAATCTAAACGAAAAGTACATCATTGGAAGAGGAGCTCACGGAATTGTGT 2521 Query 2426 ACAGAGCTTCTTTAGGATCAGGCG-AA-GAATACGCCGTGAAGAAACTCATCTTTGCGGA 2483 |||||||||||||||| || || | || | ||||| ||||||| ||| |||| || Sbjct 2522 ACAGAGCTTCTTTAGGCTC-GG-GAAAGGTCTACGCTGTGAAGAGACTTGTCTTCGCATC 2579 Query 2484 ACACATTCGCGCAAACCAAAATATGAAGCGGGAGATCGAAACAATCGGGC-TAGTCAGGC 2542 ||||| ||||| ||||| | ||||| | | |||||||| |||||| ||| |||||||| Sbjct 2580 TCACATCCGCGCTAACCAGAGTATGATGAGAGAGATCGATACAATC-GGCAAAGTCAGGC 2638 Query 2543 ACAGAAATCTCATTC-GGTTAGAAAGATTTTGGATGAGGAAAGAAGATGGCTTAATGCTG 2601 |||| ||||| | || ||||||| | |||||| |||||||||| ||||| || |||||| Sbjct 2639 ACAGGAATCTGA-TCAAGTTAGAAGGGTTTTGGCTGAGGAAAGATGATGGTTTGATGCTG 2697 Query 2602 TATCAG-TACATGCCCAATGGAAGCCTACACGACGTTTTGCACAGAGGTA-ATCAAGGAG 2659 ||| || ||||||||||| |||||||| |||| ||| | || | | || ||| || Sbjct 2698 TAT-AGATACATGCCCAAAGGAAGCCTGTACGATGTTCTCCATGGTGTTAGCCCAA-AAG 2755 Query 2660 AAGCA-GTTCTTGACTGGTCTGCACGGTTCAACATAGCCCTTGG-GATTTCACATGGACT 2717 || | || || |||||||||||||||| |||| |||| || || | | | || ||||| Sbjct 2756 AA-AATGTACTAGACTGGTCTGCACGGTACAACGTAGCGCTCGGTG-TCGCTCACGGACT 2813 Query 2718 GGCGTATTTACATC-ATGATTGTCATCCACCAATAATTCACCGCGACATCAAACCAGAGA 2776 ||| ||| |||| | |||| |||||||| || || ||||||| |||||||||||||||| Sbjct 2814 GGCCTATCTACA-CTATGACTGTCATCCCCCGATTGTTCACCGTGACATCAAACCAGAGA 2872 Query 2777 ACATACTCATGGACTCGGATATGGAGCCTCACATTGGAGATTTCGGATTGGCTCGGATTC 2836 |||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||| Sbjct 2873 ACATACTCATGGACTCGGATTTGGAGCCTCACATTGGGGATTTCGGTTTGGCTCGCCTTC 2932 Query 2837 TAGATGACTCAACAGTTTCAACGGCCACTGTTACTGGCACAACTGGGTACATTGCACCAG 2896 | ||||||||||| |||||||| || |||||||| || || ||||||||||||||||||| Sbjct 2933 TCGATGACTCAACGGTTTCAACTGCAACTGTTACAGGAACCACTGGGTACATTGCACCAG 2992 Query 2897 AAAATGCGTACAAGACGGTGAGGAGCAAG-GAATCAGATGTTTACAGTTATGGAGTTGTT 2955 |||| || | ||| || |||||| | ||| ||||| || ||||||||||||||||| || Sbjct 2993 AAAACGCTTTCAAAACCGTGAGGGG-AAGAGAATCCGACGTTTACAGTTATGGAGTCGTG 3051 Query 2956 TTGCTCGAGCTGGTAAC-AGGAAAGAGAGCACTGGACAGATCTTTCCCGGA-AGATATCA 3013 || |||||||||||||| ||||| |||||| |||||| ||| |||||||| || || || Sbjct 3052 TTACTCGAGCTGGTAACGAGGAA-GAGAGCGGTGGACAAATCCTTCCCGGACAG-TA-CA 3108 Query 3014 -ACATTGTGAGCTGGGTCAGATCTGTATT-A--AGCAGCTACGAGGATGAAGACGATACT 3069 | || || |||||||| ||||||||||| | |||||| || | ||| || || | | Sbjct 3109 GATATAGTAAGCTGGGTGAGATCTGTATTGAGCAGCAGCAACAACAATGTGGAGGACA-T 3167 Query 3070 GCTGGTC--CAATCGTTGATCCAAAACTTGTGGATGAGCTTCTGGATACGAAGCTCAGGG 3127 | | | ||||| | |||||| || ||||| ||||| || ||| |||| || |||| Sbjct 3168 GGTAA-CAACAATCATCGATCCACTTCTGGTGGACGAGCTCCTAGATTCGAATCTTAGGG 3226 Query 3128 AACAAGCAATCCAAGTCACAGA-CTTGGCTCTTAGATGTACAGACAAG-AGGCCGGAGAA 3185 |||| | |||||||| || || || ||| || | ||||| || ||| | |||| || Sbjct 3227 AACAGGTGATCCAAGTGACGGAACT-GGCACTGACTTGTACGGAGAAGGAT-CCGGC-AA 3283 Query 3186 C-AGACCATCGATGAGAGATGTGGTGAAA 3213 |||||| |||||||||||| ||||||| Sbjct 3284 TGAGACCAACGATGAGAGATGCGGTGAAA 3312 > Ahg905907 jgi|Araly1|905907|Al_scaffold_0003_3035 Length=351 Score = 52.8 bits (28), Expect = 2e-05 Identities = 28/28 (100%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 2669 TTGACTGGTCTGCACGGTTCAACATAGC 2696 |||||||||||||||||||||||||||| Sbjct 74 TTGACTGGTCTGCACGGTTCAACATAGC 101 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 127568984696 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5