BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G18835.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value Ahg472107 jgi|Araly1|472107|fgenesh2_kg.1__2061__AT1G18835.1 490 2e-138 > Ahg472107 jgi|Araly1|472107|fgenesh2_kg.1__2061__AT1G18835.1 Length=295 Score = 490 bits (265), Expect = 2e-138 Identities = 285/295 (97%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 3 GGGAGATCAGTTTACGAAGAAGATGAAGAAGAGGCAAGTGGTGATAAAACAGAGAAAAAG 62 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GGGAGATCAGTTTACGAAGAAGATGAAGAAGAGGCAAGTGGTGATAAAACAGAGAAAAAT 60 Query 63 CTCTTACACTATGACTTCTTCTTCAAGCAACGTCCGTTACGTTGAGTGTCAGAAGAATCA 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTCTTACACTATGACTTCTTCTTCAAGCAACGTCCGTTACGTTGAGTGTCAGAAGAATCA 120 Query 123 TGCCGCTAATATTGGCGGCTACGCTGTTGACGGTTGCCGGGAGTTTATGGCAAGCGGCGG 182 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 121 TGCCGCTAATATCGGCGGCTACGCTGTCGACGGTTGCCGGGAGTTTATGGCAAGCGGCGG 180 Query 183 AGATGATGCTTTGACGTGTGCTGCCTGTGGCTGTCACCGGAATTTTCACCGGAGGGAAGT 242 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 181 CGATGACGCTTTGACGTGTGCTGCTTGTGGCTGTCACCGGAATTTTCACCGGAGGGAAGT 240 Query 243 TGACACGGAGGTTGTTTGTGAGTATTCTCCTCCGAATGCAAACAACTGATGAACG 297 ||| ||||||||||||||||||||||||||||||||||||||| ||| || |||| Sbjct 241 TGATACGGAGGTTGTTTGTGAGTATTCTCCTCCGAATGCAAACGACTAATTAACG 295 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10492786975 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5