BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G18890.1 Length=2568 Score E Sequences producing significant alignments: (Bits) Value Ahg920833 jgi|Araly1|920833|scaffold_102114.1 2769 0.0 Ahg476611 jgi|Araly1|476611|fgenesh2_kg.2__1741__AT1G74740.1 1604 0.0 Ahg472112 jgi|Araly1|472112|fgenesh2_kg.1__2066__AT1G18880.1 909 0.0 > Ahg920833 jgi|Araly1|920833|scaffold_102114.1 Length=1669 Score = 2769 bits (1499), Expect = 0.0 Identities = 1621/1679 (97%), Gaps = 11/1679 (1%) Strand=Plus/Plus Query 207 CTGAGTTTCTTAACTCAGCCATGGGTAACTGTAACGCCTGTGTAAGGCCAGACTCAAAAG 266 |||||||||||||||| |||||||||||||||||||||||||||||| | || | Sbjct 1 CTGAGTTTCTTAACTCGGCCATGGGTAACTGTAACGCCTGTGTAAGG-C---CT-----G 51 Query 267 AATCAAAACCATCTTCAAAGCCGAAAAAACCCAATCGAGATCGGAAATTAAACCCATTCG 326 | |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 52 ACTCAAAACCATCTCCGAAGCCGAAAAAACCCAATCGAGATCGGAAATTAAACCCATTCG 111 Query 327 CCGGAGATTTCACCAGATCCCCAGCTCCAATACGTGTTCTCAAAGATGTAATCCCTATGA 386 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 112 CCGGAGATTTCACCAGATCCCCTGCTCCAATACGTGTTCTCAAAGATGTAATCCCTATGA 171 Query 387 GCAATCAAACTCAGATCAGCGACAAATACATCTTAGGTCGTGAATTAGGTCGAGGCGAAT 446 || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 172 GCCATCAAACTCAGATCAGCGACAAATACATCTTAGGTCGAGAATTAGGTCGCGGCGAAT 231 Query 447 TCGGAATCACTTACCTCTGTACTGATCGTGAAACCCACGAAGCTTTAGCTTGCAAATCGA 506 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 232 TCGGAATCACTTACCTCTGCACTGATCGTGAAACCCACGAAGCTTTAGCTTGCAAATCGA 291 Query 507 TTTCAAAGC-GAAAGCTTCGAACAGCTGTCGATATCGAAGACGTTCGTCGTGAGGTAGCG 565 ||||||| | |||| |||||||| || ||||||||||||||||||||||||||||| ||| Sbjct 292 TTTCAAAACGGAAA-CTTCGAACCGCCGTCGATATCGAAGACGTTCGTCGTGAGGTCGCG 350 Query 566 ATTATGTCTACTTTACCTGAGCATCCAAACGTAGTTAAGCTTAAGGCTAGTTATGAGGAT 625 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 351 ATTATGTCTACTTTACCTGAGCACCCAAACGTAGTTAAGCTTAAGGCTAGTTATGAGGAC 410 Query 626 AACGAGAACGTGCATCTGGTTATGGAGCTTTGTGAAGGAGGTGAGCTTTTTGATCGGATT 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 411 AACGAGAACGTGCATCTGGTTATGGAGCTTTGTGAAGGAGGTGAGCTTTTTGATCGGATT 470 Query 686 GTTGCTAGAGGACATTACACGGAGCGTGCTGCTGCAGCTGTTGCGAGAACGATTGCTGAG 745 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 471 GTTGCCAGAGGACATTACACGGAGCGTGCTGCTGCAGCTGTTGCGAGAACGATTGCTGAG 530 Query 746 GTTGTGATGATGTGTCACTCTAATGGAGTTATGCATCGAGATTTGAAACCTGAGAATTTC 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 531 GTTGTGATGATGTGTCACTCTAATGGAGTTATGCATCGAGATTTGAAACCTGAGAATTTC 590 Query 806 TTGTTTGCTAATAAAAAGGAGAATTCTCCACTAAAGGCTATTGATTTTGGCTTGTCTGTG 865 ||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 591 TTGTTTGCTAACAAGAAGGAGAATTCTCCACTAAAGGCCATTGATTTCGGCTTGTCTGTG 650 Query 866 TTCTTCAAACCTGGAGATAAGTTTACAGAGATTGTAGGAAGTCCGTATTATATGGCTCCA 925 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 651 TTCTTTAAACCTGGAGATAAGTTTACAGAGATTGTAGGAAGTCCGTATTATATGGCTCCA 710 Query 926 GAAGTGTTGAAGAGAGATTATGGACCAGGGGTTGATGTGTGGAGTGCCGGAGTTATTATC 985 |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct 711 GAAGTGTTGAAGAGAGATTATGGACCAGAGGTTGATGTGTGGAGTGCAGGAGTTATTATC 770 Query 986 TATATCTTGCTCTGTGGTGTTCCTCCGTTTTGGGCTGAGACTGAACAAGGTGTTGCTCTT 1045 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 771 TACATCTTGCTCTGTGGTGTTCCTCCGTTTTGGGCTGAGACTGAACAAGGTGTTGCTCTT 830 Query 1046 GCGATCTTGCGGGGAGTTCTTGATTTTAAGAGAGACCCTTGGCCTCAGATATCAGAGAGT 1105 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 831 GCGATCTTGCGGGGAGTTCTTGATTTTAAGAGAGACCCTTGGCCTCAGATATCAGAGAGC 890 Query 1106 GCCAAGAGCCTTGTGAAGCAGATGTTGGATCCTGATCCGACTAAGCGGTTAACTGCTCAG 1165 |||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||| Sbjct 891 GCCAAGAGTCTTGTGAAGCAGATGTTGGATCCGGATCCGAGTATGCGGTTAACTGCTCAG 950 Query 1166 CAAGTGTTAGCTCACCCATGGATACAGAATGCAAAGAAAGCTCCCAATGTTCCTTTAGGA 1225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 951 CAAGTGTTAGCTCACCCATGGATACAGAATGCAAAGAAAGCTCCCAATGTTCCTTTAGGA 1010 Query 1226 GATATAGTCAGATCTAGGTTGAAGCAGTTCTCTATGATGAACAGATTCAAAAAGAAAGTT 1285 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1011 GATATAGTCAGATCGAGGTTGAAGCAGTTCTCTATGATGAACAGATTCAAAAAGAAAGTT 1070 Query 1286 CTTCGTGTAATTGCGGAGCACTTGTCTATTCAAGAGGTTGAAGTGATAAAGAACATGTTC 1345 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1071 CTTCGTGTAATCGCGGAGCACTTGTCTATTCAAGAGGTTGAAGTGATCAAGAACATGTTC 1130 Query 1346 TCACTGATGGATGATGACAAGGATGGTAAAATAACTTACCCGGAACTCAAAGCTGGGCTT 1405 ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 1131 TCACTTATGGATGATGATAAGGATGGTAAAATAACTTACCCAGAACTCAAAGCTGGGCTT 1190 Query 1406 CAGAAGGTCGGTTCACAACTTGGTGAACCAGAGATCAAAATGTTGATGGAAGTGGCGGAT 1465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1191 CAGAAGGTCGGTTCACAACTTGGTGAACCAGAGATCAAAATGTTGATGGAAGTGGCGGAT 1250 Query 1466 GTCGATGGAAATGGGTTTCTGGATTATGGAGAGTTTGTAGCTGTGATAATTCACTTGCAG 1525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1251 GTCGATGGAAATGGGTTTCTGGATTATGGAGAGTTTGTAGCTGTGATAATTCACTTGCAG 1310 Query 1526 AAGATAGAGAATGATGAACTTTTCAAACTAGCTTTTATGTTTTTCGACAAAGATGGAAGT 1585 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1311 AAGATAGAGAATGATGAACTTTTCAAACTAGCTTTTATGTTCTTCGACAAAGATGGAAGT 1370 Query 1586 ACATACATTGAACTTGATGAGCTACGGGAAGCTTTAGCGGATGAGTTAGGCGAGCCAGAC 1645 |||||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||| Sbjct 1371 ACATACATTGAACTTGATGAGCTACGAGAAGCTTTAGCTGATGAGTTAGGGGAACCAGAC 1430 Query 1646 GCCAGTGTTCTAAGCGACATCATGCGTGAAGTTGACACTGACAAGGACGGACGTATAAAC 1705 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1431 ACCAGTGTTCTAAGCGACATTATGCGTGAAGTTGACACTGACAAGGACGGGCGTATAAAC 1490 Query 1706 TATGATGAGTTTGTGACGATGATGAAAGCTGGAACTGACTGGAGAAAGGCATCGAGACAA 1765 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1491 TATGATGAGTTTGTGGCGATGATGAAAGCTGGAACTGACTGGAGAAAGGCATCAAGACAA 1550 Query 1766 TATTCAAGAGAGAGGTTCAAAAGCTTAAGCATTAACTTGATGAAAGATGGGTCATTGCAT 1825 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1551 TATTCAAGAGAGAGGTTCAAAAGCTTAAGCCTTAACTTGATGAAAGATGGGTCATTGCAT 1610 Query 1826 CTCCATGACGCTCTCACTGGACAAACTGTTCCTGTTTAAATTTATTCGTTATCACCAAA 1884 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1611 CTCCATGACGCTCTCACTGGACAAACTGTTCCTGTTTAATTTTATTCGTTATCACCAAA 1669 > Ahg476611 jgi|Araly1|476611|fgenesh2_kg.2__1741__AT1G74740.1 Length=2001 Score = 1604 bits (868), Expect = 0.0 Identities = 1322/1541 (86%), Gaps = 32/1541 (2%) Strand=Plus/Plus Query 373 TGTAATCCCTATGAGCAATCAAACTCAGATCAGCGACAAATACATCTTAGGTCGTGAATT 432 ||| |||||||||||| ||||| |||||||||||||||| || ||| | || || ||| | Sbjct 270 TGTGATCCCTATGAGCCATCAATCTCAGATCAGCGACAAGTATATCCTCGGACGAGAACT 329 Query 433 AGGTCGAGGCGAATTCGGAATCACTTACCTCTGTACTGATC-GTGAAACCCACGAAGCTT 491 ||||| ||||||||||||||||| || || ||||| || | | || || | ||||||| Sbjct 330 CGGTCGCGGCGAATTCGGAATCACCTATCTTTGTACAGA-CAGAGAGACTCGTGAAGCTT 388 Query 492 TAGCTTGCAAATCGATTTCAAAGCGAAAGCTTCGAACAGCTGTCGATATCGAAGACGTTC 551 ||||||||||||| || || ||| ||||||| ||||| || ||||| | |||||||| | Sbjct 389 TAGCTTGCAAATCAATCTCCAAGAGAAAGCTCCGAACCGCCGTCGACGTGGAAGACGTCC 448 Query 552 GTCGTGAGGT-AGCGATTATGTCTACTTTACCTGAGCATCCAAACGTAGTTAAGCTTAAG 610 | ||||| || | |||| ||||| ||| | || || ||||||||||| || || || || Sbjct 449 GCCGTGAAGTCA-CGATCATGTCAACTCTCCCGGAACATCCAAACGTTGTGAAACTCAAA 507 Query 611 GCTAGTTATGAGGATAACGAGAACGTGCATCTGGTTATGGAGCTTTGTGAAGGAGGTGAG 670 || | ||||||||| ||||||||||||||||| || |||||||||||||||||||||||| Sbjct 508 GCGACTTATGAGGACAACGAGAACGTGCATCTTGTGATGGAGCTTTGTGAAGGAGGTGAG 567 Query 671 CTTTTTGATCGGATTGTTGCTAGAGGACATTACACGGAGCGTGCTGCTGC-AGCTGTTGC 729 |||||||||||||||||||| ||||||||||| || |||||||| || || | | || || Sbjct 568 CTTTTTGATCGGATTGTTGCGAGAGGACATTATACAGAGCGTGCGGCGGCTACC-GTCGC 626 Query 730 GAGAACGATTGCTGAGGTTGTGATGATGTGTCAC-TCTAATGGAGTTATGCATCGAGATT 788 ||| ||||| || |||||||||| ||||||||| || ||||| ||||||||| |||||| Sbjct 627 GAGGACGATCGCGGAGGTTGTGAGGATGTGTCATGTC-AATGGTGTTATGCATAGAGATT 685 Query 789 TGAAACCTGAGAATTTCTTGTTTGCTAATAAAAAGGAGAATTCTCCACTAAAGGCTATTG 848 |||| ||||||||||||||||||||||| || |||||||||||| |||| |||||||||| Sbjct 686 TGAAGCCTGAGAATTTCTTGTTTGCTAACAAGAAGGAGAATTCTGCACTTAAGGCTATTG 745 Query 849 ATTTTGGCTTGTCTGTGTTCTTCAAACCTGGAGATAAGTTTACAGAGATTGTAGGAAGTC 908 ||||||| || |||||| |||| |||||||| || | ||||||||||||||||||||||| Sbjct 746 ATTTTGGTTTATCTGTGCTCTTTAAACCTGGGGAGAGGTTTACAGAGATTGTAGGAAGTC 805 Query 909 CGTATTATATGGCTCCAGAAGTGTTGAAGAGAGATTATGGACCAGGGGTTGATGTGTGGA 968 | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 806 CTTATTATATGGCTCCAGAAGTGTTGAAGAGAAATTATGGACCAGAGGTTGATGTGTGGA 865 Query 969 GTGCCGGAGTTATTATCTATATCTTGCTCTGTGGTGTTCCTCCGTTT-TGGGCTGAGACT 1027 |||| |||||||| |||| ||||||||||||||||||||||| ||| ||||| |||||| Sbjct 866 GTGCTGGAGTTATCCTCTACATCTTGCTCTGTGGTGTTCCTCC-TTTCTGGGCAGAGACT 924 Query 1028 GAACAAGGTGTTGCTCTTGCGATCTTGCGGGGAGTTCTTGATTTTAAGAGAGACCCTTGG 1087 ||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| Sbjct 925 GAACAAGGTGTGGCTCTTGCAATCTTGAGGGGAGTTCTTGATTTTAAGAGAGATCCTTGG 984 Query 1088 CCTCAGATATCAGAGAGTGCCAAGAGCCTTGTGAAGCAGATGTTGGATCCTGAT-CCGAC 1146 | |||||||||||||| || ||||||||||| |||||||||||||| |||||| || || Sbjct 985 TCGCAGATATCAGAGAGCGCAAAGAGCCTTGTTAAGCAGATGTTGGAACCTGATGCC-AC 1043 Query 1147 TAAGCGGTTAACTGCTCAGCAAGTG-TTAGCTCACCCATGGATACAGAATGCAAAGAAAG 1205 |||||| || |||||||||||||| || | |||||| |||||||| ||||| ||||||| Sbjct 1044 TAAGCGTTTGACTGCTCAGCAAGTTCTT-GATCACCCTTGGATACAAAATGCTAAGAAAG 1102 Query 1206 CTCCCAATGTTCCTTTAGGAGATATAGTCAGATCTAGGTTGAAGCAGTTCTCTATGATGA 1265 |||| |||||||||||||| ||||| || || || || |||||||| ||||| ||||||| Sbjct 1103 CTCCAAATGTTCCTTTAGGGGATATTGTTAGGTCAAGATTGAAGCAATTCTCCATGATGA 1162 Query 1266 ACAGATTCAAAAAGAAAGTTCTTCGTGTAATTGCGGAGCACTTGTCTATTCAAGAGGTTG 1325 | ||||| |||||||||| ||| ||||| || ||||| ||||||||| ||||||| |||| Sbjct 1163 ATAGATTGAAAAAGAAAGCTCTGCGTGTTATCGCGGAACACTTGTCTCTTCAAGAAGTTG 1222 Query 1326 AAGTGATAAAGAA-CATGTTCT-CACTGATGGATGATGACAAGGATGGTAAAATAACTTA 1383 ||||||| | ||| |||||| | ||||||||||||||||||| || ||||||||| | || Sbjct 1223 AAGTGATCA-GAAACATGTT-TACACTGATGGATGATGACAACGACGGTAAAATATCATA 1280 Query 1384 CCCGGAACTCAAAGCTGGGCTTCAGAAGGTCGGTTCACAACTTGGTGAACCAGAGATCAA 1443 | ||||||| |||||| || | ||| |||||||||||||| ||||||||||||||||| Sbjct 1281 TCTAGAACTCAGAGCTGGACTCCGGAAAGTCGGTTCACAACTGGGTGAACCAGAGATCAA 1340 Query 1444 AATGTTGATGGAAGTGGCGGATGTCGATGGAAATGGGTTTCTGGATTATGGAGAGTTTGT 1503 | |||||||||||||||||||||| | |||||||| | || || |||||||||||||| Sbjct 1341 ATTGTTGATGGAAGTGGCGGATGTTAACGGAAATGGATGCCTAGACTATGGAGAGTTTGT 1400 Query 1504 AGCTGTGATAATTCACTTGCAGAAGATAGAGAATGATGAACTTTTCAAACTAGCTTTTAT 1563 ||| ||||||||||||||||||||||| ||||||||||| | ||||| || ||||||||| Sbjct 1401 AGCAGTGATAATTCACTTGCAGAAGATGGAGAATGATGAGCATTTCAGACAAGCTTTTAT 1460 Query 1564 GTT-TTTCGACAAAGATGGAAGTACATACATTGAA-CTTGATGAGCTACGGGAAGCTTTA 1621 ||| ||| ||||||||||||||| |||||| ||| | || || ||||| ||||||||| Sbjct 1461 GTTCTTT-GACAAAGATGGAAGTGGATACATCGAATCA-GAAGAACTACGTGAAGCTTTA 1518 Query 1622 GCGGATGAGTTAGGCGAGCCAGACGCCAGTGTTCTAAGCGACATCATGCGTGAAGTTGAC 1681 | || |||||||| || |||||| ||| ||| ||| ||| || ||||||||||| ||| Sbjct 1519 ACCGACGAGTTAGGTGAACCAGACAACAGCGTTATAATCGATATAATGCGTGAAGTCGAC 1578 Query 1682 ACTGACAAGGACGGACGTATAAACTATGATGAGTTTGTGACGATGATGAAAGCTGGAACT 1741 ||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| Sbjct 1579 ACTGACAAGGACGGACGAATAAACTACGATGAGTTTGTGGTGATGATGAAAGCTGGAACT 1638 Query 1742 GACTGGAGAAAGGCATCGAGACAATATTCAAGAGAGAGGTTCAAAAGCTTAAGCATT-AA 1800 || |||||||||||||| |||||||| |||||||||||||| |||||||||||| || || Sbjct 1639 GATTGGAGAAAGGCATCAAGACAATACTCAAGAGAGAGGTTTAAAAGCTTAAGC-TTGAA 1697 Query 1801 CTTGATGAAAGATGGGTCATTGCATCTCCATGACGCTCTCACTGGACAAACTGTTCCTGT 1860 ||||||||||||||||||| ||||||| || ||||| |||||||||||| || || | || Sbjct 1698 CTTGATGAAAGATGGGTCAATGCATCTACACGACGCACTCACTGGACAATCTATTGCAGT 1757 Query 1861 TTAAA-TTTA---TTCGTT-ATCACCAAAAACAGA-GCAAT 1895 || | |||| || ||| ||||| |||| |||| ||||| Sbjct 1758 TTGATCTTTACACTT-GTTTATCACGAAAA-CAGAAGCAAT 1796 > Ahg472112 jgi|Araly1|472112|fgenesh2_kg.1__2066__AT1G18880.1 Length=1901 Score = 909 bits (492), Expect = 0.0 Identities = 579/618 (94%), Gaps = 17/618 (3%) Strand=Plus/Minus Query 1964 ACGGAAGCTATGGTTC-TTTACATAT-ATAAACATTTTACATTGTATTTTGTATGTAATG 2021 |||||||||||||| | |||| |||| | ||||||||||||||||| ||||||||||||| Sbjct 1901 ACGGAAGCTATGGTCCTTTTATATATAAAAAACATTTTACATTGTA-TTTGTATGTAATG 1843 Query 2022 TTTTGTTCAAAGGTTGTATTTTTATTGTCTCAAAG-----C----CCCTAAACCAAAGAG 2072 |||||||||||||||||| |||||||||||||||| | ||||| ||||||||| Sbjct 1842 TTTTGTTCAAAGGTTGTA-TTTTATTGTCTCAAAGCAACTCAAAGCCCTATACCAAAGAG 1784 Query 2073 TCAAAGG-AAAGATCTTTATTACACTGACACCTTATCAAACTCAG-CAGAAGTCTTGTCC 2130 || |||| | ||||||||||||||||||||||||||||||||| | |||||| ||||||| Sbjct 1783 TC-AAGGTACAGATCTTTATTACACTGACACCTTATCAAACTC-GTCAGAAGACTTGTCC 1726 Query 2131 ATGTCCTTGTCCTTGGCCACAACATCTTTGTAACGGTACCAATGTGAGACCAACAAGAAA 2190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1725 ATGTCCTTGTCCTTGGCCACAACATCTTTGTAACGGTACCAATGTGAGACCAACAAGAAA 1666 Query 2191 TAGGCCAAGTTTAGAGTCATCATACCAGCAACCAAGAAGTAGAAATACTCCAATCTTCCC 2250 ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 1665 TAGGCAAAGTTTAGAGTCATAATACCAGCAACCAAGAAGTAGAAGTACTCCAATCTTCCC 1606 Query 2251 TTGTTTAAATCTTCCGGAAGCCAACTTCCTCCTGAAAATCCCTCTGTGGTATCGTGTACC 2310 ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||| Sbjct 1605 TTGTTTAAATCTTCCGGAAGCCAGCTTCCTCCCGAAAATCCCTCTGTCGTATCGTGCACC 1546 Query 2311 GCCGATAACAAAAAGGTGCTGAGGTAACTCGCCAATCCGATTCCACAATAATACAGAGAA 2370 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| ||| Sbjct 1545 GCCGATAACAAAAAGGTGCCGAGGTAACTCGCCAATCCAATTCCGCAATAATACAGGGAA 1486 Query 2371 CCAGCAAAACTTCGCATGTTCTCTGGAAACTGTTTGTAGTAAAACTCCATTTGTCCAACT 2430 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1485 CCAGCAAAACTTCTCATGTTCTCTGGAAACTGTTTGTAATAAAACTCCATTTGTCCAACT 1426 Query 2431 CCAGCGAGGGCGTCCGCGATACCCATTAGCACTAGCTGAGGAATCAACCACATACCGGAC 2490 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1425 CCAGCAAGGGCGTCCGCGATACCCATTAGCACTAGCTGAGGAATCAACCACATACCGGAC 1366 Query 2491 ATCGAAGAGATTGCGCCTTTTCTTGGGGCCAACCCTAGCGTCGGTTTTGTGAGAGCTACC 2550 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1365 ATTGAAGAGATTGCGCCTTTTCTTGGGGCAAACCCTAGCGTCGGTTTTGTGAGAGCTACC 1306 Query 2551 TTTCTTCTGTATTGTTCT 2568 |||||||||||||||||| Sbjct 1305 TTTCTTCTGTATTGTTCT 1288 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 96825402790 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5