BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G21160.1
Length=3724
Score E
Sequences producing significant alignments: (Bits) Value
Ahg313019 jgi|Araly1|313019|fgenesh1_pm.C_scaffold_1001799 3910 0.0
Ahg927067 jgi|Araly1|927067|scaffold_202628.1 1519 0.0
Ahg900570 jgi|Araly1|900570|Al_scaffold_0004_1220 1062 0.0
Ahg476840 jgi|Araly1|476840|fgenesh2_kg.2__1970__AT1G76810.1 1053 0.0
Ahg921553 jgi|Araly1|921553|scaffold_102834.1 856 0.0
> Ahg313019 jgi|Araly1|313019|fgenesh1_pm.C_scaffold_1001799
Length=4290
Score = 3910 bits (2117), Expect = 0.0
Identities = 2532/2729 (93%), Gaps = 42/2729 (2%)
Strand=Plus/Plus
Query 785 CTGTTGAGTCAGCTACAGCgaagaaaaagaaaaagaagaaggacaaggacaagaaagcaa 844
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 137 CTGTTGAGTCTTTTACAGCGAAGAAAAAGAAAAAGAAGAAGGACAAGGGCAAGAAAGC-A 195
Query 845 g-TGCTTCTT-TAGCTATTTCTTCTGTGGAGGCTAAGGAGG----A-T--AG-A--C-A- 890
| ||||| || |||||| ||||||||||||||||||||||| | | || | | |
Sbjct 196 GATGCTT-TTGTAGCTAATTCTTCTGTGGAGGCTAAGGAGGATAAACTAGAGAATTCAAT 254
Query 891 A---G-G-----GAAGAAAGATGTAAAGATTAAAGTAGCGGAAAAGAAAGTTCCTAAACA 941
| | | |||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct 255 ATCTGAGCCCAAGAAGAAAGATGTAAAGGCTAAAGTAGCCGAGAAGAAAGTTCCTAAACG 314
Query 942 TGTTCGagagaagcaagagactcttgcgcggtggaaagaagctgaagatg-ggaagaaga 1000
||||||||||| |||||||| |||||||||| |||||||||||||||| | |||||||||
Sbjct 315 TGTTCGAGAGATGCAAGAGATTCTTGCGCGGCGGAAAGAAGCTGAAGA-GAGGAAGAAGA 373
Query 1001 aggaagaagaagagagattgaggaaagaggaagaggagcgccgtatagaggaagagcgag 1060
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 374 AGGAAGAAGAAGAGAGATTAAGGAAAGAGGAAGAGGAGCGCCGCATAGAGGAAGAGCGAG 433
Query 1061 aaagggaagctgaagagattaggcagaagagaaagatcaggaaaatggagaagaagcaag 1120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 434 AAAGGGAAGCTGAAGAGATTAGGCAGAAGAGAAAGATAAGGAAAATGGAGAAGAAGCAAG 493
Query 1121 aagGCCTGATTCTAACAGCAAAGCAAAAGCGTGATGCTGCTAAGAATGAGGCTTTCAGAA 1180
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 494 AAGGCCTAATTCTAACAGCAAAGCAAAAGCGTGAAGCTGCTAAGAATGAGGCTTTCAGAA 553
Query 1181 AAAGGGTGTTGA-CTGATGCTGGAAGTCTTCTTGTTGCAGATAAAAACGGTGATTCCTCA 1239
|||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 554 AAAGGGTGTT-ATCTGATGCTGGAAGTCTTCTTGTTGCAGATAAAAACAGTGATTCCTCA 612
Query 1240 AAACGTCCCATATATGGCAATAAAAACAAATTAGCTTGCAAAAAAGCAAACGATCCTGCT 1299
| |||||||||||||||||| |||||||||| |||||||| ||||| ||||||| |||||
Sbjct 613 AGACGTCCCATATATGGCAACAAAAACAAATCAGCTTGCAGAAAAGTAAACGATTCTGCT 672
Query 1300 TCTGTCCAGGCT-AAAGGTGATGGGGAAACCAAGGAAAATCATGCAGCAGATGAACCATG 1358
|||||||| | | |||||||||| ||||| ||||| ||||||||||||||| ||||| |
Sbjct 673 TCTGTCCA-GATGAAAGGTGATGTAGAAACAAAGGACAATCATGCAGCAGATAAACCAGG 731
Query 1359 TACTTTACCTGACTTGGTTTCAGTTGAAGATAGAAGGGTTGGTATTATCGAATCAGTAGA 1418
|||||| | ||| |||||||||||||| |||| || |||||| || ||||||||||| ||
Sbjct 732 TACTTTGCATGAATTGGTTTCAGTTGACGATAAAAAGGTTGGAATAATCGAATCAGTTGA 791
Query 1419 CACAGAAGAGACACATGAATCTGTTGATGTATCACAAGAGAATGGTGATGAGGAAGATGT 1478
||||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 792 CACAGAAGAGAAATATGAATCTGTTGATGTATCACATGAGAATGGTGATGAGGAGGATGT 851
Query 1479 GTGGGATGCAAAAACTAATTTTACCATCAAGGGTGATTCTGATGATGAGGAGGAAAAACC 1538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 852 GTGGGATGCAAAAACTAATTTTACCATCAAGGGTGATTCTGATGATGAGGAGGAAAAACA 911
Query 1539 TCAGCCTGTGTTCAAGAAAGGTTTAAAAGACACTGCATCAAAGGCACATGATTCAGTTCC 1598
|||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| |||
Sbjct 912 TCAGCCTGTGTTTAAGAAAGAATTAAACGACACTGCATCAAAGGCACATGATTCAGGTCC 971
Query 1599 TGGCGCAGATAGACCAACAGTGAAGCCTGGAGGTT-CTGGCAAGCCAAAAACAGCTGCCA 1657
|||||||||||||| || ||||||||||||| ||| |||||||||||||||||| |||||
Sbjct 972 TGGCGCAGATAGACAAAAAGTGAAGCCTGGA-GTTGCTGGCAAGCCAAAAACAGATGCCA 1030
Query 1658 AAAAAGCTATGCCTAAGGTGGATGATACTACCCGGCCGAAAGATACTTCTAAAAAGGATG 1717
||||||||||||||||| |||||| | ||||| |||||||||||||||| ||||||||||
Sbjct 1031 AAAAAGCTATGCCTAAGATGGATGGTGCTACCTGGCCGAAAGATACTTCGAAAAAGGATG 1090
Query 1718 AAGGCTTAGTACTGAATGAA-CTTGCTAAAGAAGTAGAAGAAAATCTTCGCTCTCCAATT 1776
|||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| |||
Sbjct 1091 AAGGCTTAGTACTGAATGAAGCTT-CTAAAGAAGTAGAAGAAAGTCTTCGCTCTCCCATT 1149
Query 1777 TGCTGCATCATGGGTCATGTTGATTCTGGTAAAACAAAGCTGTTGGATTGCATCAGAGGA 1836
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1150 TGCTGCATCATGGGTCATGTTGATTCTGGTAAAACAAAGCTATTGGATTGCATCAGAGGA 1209
Query 1837 ACAAATGTTCAGGAAGGTGAAGCTGGAGGTATTACTCAACAGATTGGTGCAACCTTTTTC 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1210 ACAAATGTTCAGGAAGGTGAAGCTGGAGGTATTACTCAACAGATTGGTGCAACATATTTC 1269
Query 1897 CCTGCAGAAAACATCCGTGAGAGGACCAAAGAGTTACAAGCTAATGCTAAACTCAAGGTG 1956
||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct 1270 CCTGCAGAAAACATCCGTGAGAGGACCAAGGAGTTAAAAGCTGATGCTAAACTCAAGGTG 1329
Query 1957 CCAGGTATATTGGTTATCGATACACCTGGACACGAGTCATTCACAAATCTGCGGTCAAGG 2016
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1330 CCAGGTCTATTGGTTATCGATACACCTGGACATGAGTCATTCACAAATCTGCGGTCAAGG 1389
Query 2017 GGTTCAAATTTGTGTGACCTTGCAATTCTAGTGGTTGATATAATGCGAGGTCTAGAGCCA 2076
||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1390 GGTGCAAATTTGTGTGACCTTGCAATTCTAGTGGTTGACATAATGCGTGGTCTAGAGCCA 1449
Query 2077 CAAACCATAGAATCTCTTAATCTTTTGAGAAGAAGGAATGTAAAGTTCATTATTGCCTTG 2136
|||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1450 CAAACCTTAGAATCTCTGAATCTTTTGAGAAGAAGGAATGTAAAGTTCATTGTTGCCTTG 1509
Query 2137 AATAAGGTGGATAGGCTATATGGGTGGGAAAAAAGCAAGAATGCTCCTATAAGGAAGACA 2196
||||||||||||||||||||| ||||| |||||| |||| |||||||| ||| |||||||
Sbjct 1510 AATAAGGTGGATAGGCTATATAGGTGGAAAAAAAACAAGGATGCTCCTCTAATGAAGACA 1569
Query 2197 ATGATGCAACAAACGGGAGATGTGGTTAAGGAATTTAAAATGAGGCTAAACCGAGTTCAA 2256
|||| ||||||| | || |||||||| | || ||||| |||| || | | |||| ||
Sbjct 1570 ATGAAGCAACAATTGAGAAATGTGGTTGATGAGTTTAACATGAAATTACATCAAGTT-AA 1628
Query 2257 AA-CCAGTTCCAAGAACAAGGACTCAACAGTATGCTTTATTACAAGAACAGAGAAATGGG 2315
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1629 AACCCAGTTCCAAGAACAAGGACTCAATAGTATGCTTTATTACAAGAACAGAGAAATGGG 1688
Query 2316 AGAAACTATCAGTATCCTACCTGCTAGCGCTATTAGTGGGGAAGGGATTCCAGATCTTTT 2375
||||||||||||||| ||||| |||| |||||||||||||||||||| |||||||||||
Sbjct 1689 AGAAACTATCAGTATTGTACCTACTAGTGCTATTAGTGGGGAAGGGATCCCAGATCTTTT 1748
Query 2376 ACTGTTCTTGGTTCAATGGGCTCAGAAAACGATGGTGGAGAAACTTACATATGTTGACAA 2435
||||| || |||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct 1749 GCTGTTGTTAGTTCAATGGGCTCAGAAAACAATGGTGGAGAAACTCACATACGTTGACAA 1808
Query 2436 AGTGCAGTGTACCGTCCTTGAGGTCAAAGTTATTGAAGGCCATGGTATTACAGTTGATGT 2495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1809 AGTGCAGTGTACCGTCCTTGAGGTCAAAGTTATTGAAGGCCATGGTATTACAGTTGATGT 1868
Query 2496 TGTTTTGGTCAACGGTGTACTCCGTGAAGGTGATCAAATTGTTGTTTGTGGGTCACAGGG 2555
||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||
Sbjct 1869 TGTTTTGGTCAACGGTGTACTTCGTGAAAGTGATCAAATCATTGTTTGTGGGTCACAGGG 1928
Query 2556 ACCAATTGTAACAACTATTAGATCATTGTTGACTCCTTATCCTATGAACGAGATGCGGGT 2615
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 1929 ACCAATTGTAACAACTATTAGATCATTATTGACTCCTTATCCTATGAACGAGACGCGGGT 1988
Query 2616 GACGGGTACCTATATGCCTCACAGAGAAGTAAAGGCTGCGCAGGGTATCAAAATTGCTGC 2675
|| ||||||||||||| | ||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1989 GAAGGGTACCTATATGGCACACAGAGAAATAAAGGCTGCGCAGGGTATCAAAATTGCAGC 2048
Query 2676 ACAGGGCCTTGAACACGCCATTGCTGGTACTGCCTTGCATGTGATTGGACCTAATGAGGA 2735
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2049 ACAGGGCCTTGAACACGCCATTGCTGGTACTGCCTTGCATGTGATTGGGCCTAATGAGGA 2108
Query 2736 CATGGAAGAAGCCAAGAAAAATGCCATGGAAGATATTGAGTCAGTTATGAACCGCATTGA 2795
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 2109 CATGGAAGAAGCCAAGAAAAATGTCATGGAAGATATTGAATCAGTTATGAACCGCATTGA 2168
Query 2796 CAAAAGTGGTGAAGGCGTTTATGTACAAGCATCTACATTAGGGTCCTTGGAAGCATTGCT 2855
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2169 CAAAAGTGGTGAAGGAGTTTATGTACAAGCGTCTACATTAGGGTCCTTGGAAGCATTGCT 2228
Query 2856 CGAGTTCTTGAAGTCCTCAGATGTAAAAATACCTGTCAGTGGTATTGGCATAGGACCTGT 2915
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2229 CGAGTTCTTGAAGTCCTCAGATGTAAAAATACCTGTCAGTGGTAATGGCATAGGACCTGT 2288
Query 2916 GCATAAGAAGGATATCATGAAGGCCGGGGTAATGCTAGAGAAGAAAAAAGAGTTTGCAAC 2975
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2289 GCATAAGAAGGATATCATGAAGGCCGGGGTAATGCTAGAGAAGAAAGAAGAGTTTGCAAC 2348
Query 2976 GATTTTGGCCTTTGATGTGAAAATAAGTGCAGAAGCTCGTGAACTTGCAGACAAAATGGG 3035
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2349 GATTTTGGCCTTTGATGTGAAAATAACTGCAGAAGCTCGTGAACTTGCAGACAAAATGGG 2408
Query 3036 AGTAAAAATCTTCTGCGATGATACCATCTATTGTCTGTTCGATAAGTTTAAGAGTTACAT 3095
||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||
Sbjct 2409 AGTAAAAATCTTCTGCGATGATACCATCTATCGTCTCTTCAATAAGTTTAAGAGTTACAT 2468
Query 3096 AGAGGGTATCAAAGAGGAGAAAAAGAAAGAAACAGCTTGTGAAGCAGTTTTCCCATGTAT 3155
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2469 CGAGGGTATCAAAGAGGAGAAAAAGAAAGAAACAGCTTGTGAAGTAGTTTTCCCATGTAT 2528
Query 3156 CCTTCAGATTTTACCAAACCATATCTACAATCAGAGGGACCCAATTATCCTTGGAGTTAA 3215
||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||
Sbjct 2529 CCTTCAGATTTTACCAAACCATATCTACAATAAGAAGGACCCAATCATCCTTGGAGTTAA 2588
Query 3216 AGTCAATGATGGAATACTAAAGGTTGGAACTCCCATTTGCATTGTTAAAAGGATTGAGAA 3275
|||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||
Sbjct 2589 AGTCAATGATGGAATACTCAAGGTTGGAACTCCCATTTGCATTCTCAAAAGGATTGAGAA 2648
Query 3276 TGTAAGAGTGTTTATGGACATTGGGCGCGTCT-CATCAATTAAGAATAACAACAACATGC 3334
|||||||||| ||||||||||||||||||| | |||| ||||| |||||||||| ||
Sbjct 2649 TGTAAGAGTGATTATGGACATTGGGCGCGT-TGCATCTATTAAAAATAACAACAG---GC 2704
Query 3335 CAGTTGATTATGCAAGGAAAGGACAGGAGGTGGCTATTAAGATCATTGCTTCTAACCCAG 3394
|||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 2705 CAGTTGATAATGCAAGGAAAGGACAGGAAGTGGCTATTAAAATCATTGCTTCTAACCCAG 2764
Query 3395 AAGAACAGAAAATGTTTGGGAGGCACTTTGGTGTAGACGACAGGCTTATCAGTCACATTT 3454
|||||||||||| || ||||| |||||||||| |||| ||| ||||||||||||||||||
Sbjct 2765 AAGAACAGAAAAAGTGTGGGAAGCACTTTGGTATAGAGGACGGGCTTATCAGTCACATTT 2824
Query 3455 CTAGTCGATCCGTGGACGTAATCAGAACT 3483
|||| |||||| | |||||| ||||||||
Sbjct 2825 CTAGGCGATCCATTGACGTACTCAGAACT 2853
Score = 152 bits (82), Expect = 2e-35
Identities = 115/131 (88%), Gaps = 2/131 (2%)
Strand=Plus/Plus
Query 280 ATGGATCCGAGGAATTCGAGTGCGTGGGGTGGGGGTGATGGTCTCCCCCTTATCTCATCC 339
||||||||||||||||||||||||||||||||| |||| |||| ||||| ||| |||
Sbjct 1 ATGGATCCGAGGAATTCGAGTGCGTGGGGTGGGAAAGATGATCTCTCCCTTGTCTTATCT 60
Query 340 ATGGGAGGTGTTGAATCAAAGAATAGATGCTGTGTGACT-GACGACGATGGCTCTATTGG 398
|||||||||| |||||| |||||||| || ||||||| | || |||||||||||||||||
Sbjct 61 ATGGGAGGTGCTGAATCTAAGAATAGCTGTTGTGTGA-TAGATGACGATGGCTCTATTGG 119
Query 399 TACGAAGCTAT 409
|| ||||||||
Sbjct 120 TAAGAAGCTAT 130
> Ahg927067 jgi|Araly1|927067|scaffold_202628.1
Length=3799
Score = 1519 bits (822), Expect = 0.0
Identities = 1521/1853 (82%), Gaps = 69/1853 (4%)
Strand=Plus/Plus
Query 1637 GCAAGCCAAAAACAGCTGCCAAAAAAGCTATGCCT-AAGGTGGATGATACTACCCGGCCG 1695
||||||||| |||||||| | |||||||||| || || ||||| || ||| | ||||
Sbjct 1879 GCAAGCCAAGAACAGCTGTCGTAAAAGCTATGTCTGAA-GTGGAACATGCTA--C-GCCG 1934
Query 1696 A-AAGATAC-TTCTAAAAAGGATGAAGGCTTAGTACT-GAA-TGAACTTGCTA-AAGAA- 1749
| || | || | |||| |||| | ||||||||| || || |||| || || |||||
Sbjct 1935 ACAA-A-ACGTGCTAAGAAGGGTAAAGGCTTAG--CTCCAAGTGAA-TTTATAGAAGAAG 1989
Query 1750 GTAGAAGAAAATCTTCGCTCTCCAATTTGCTGCATCATGGGTCATGTTGATTCTGGTAAA 1809
|| | ||||||||| || ||| |||||||| |||||||||||||||||| ||||||||
Sbjct 1990 GT-GGAGAAAATCTCCGTTCTATTATTTGCTGTATCATGGGTCATGTTGATACTGGTAAA 2048
Query 1810 ACAAAGCTGTTGGATTGCATCAGAGGAACAAATGTTCAGGAAGGTGAAGCTGGAGGTATT 1869
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 2049 ACAAAGCTGTTGGATTGCATCAGAGGAACAAATGTACAGGAAGGTGAGGCTGGAGGTATT 2108
Query 1870 ACTCAACAGATTGGTGCAACCTTTTTCCCTGCAGAAAACATCCGTGAGAGGACCAAAGAG 1929
||||| |||||||||||||| | ||||||||| ||||||||||| |||||||||| ||
Sbjct 2109 ACTCAGCAGATTGGTGCAACATATTTCCCTGCGGAAAACATCCGAGAGAGGACCAGGGAA 2168
Query 1930 TT-ACAAGCTAATGCTAAACTCAAGGTGCCAGGTATATTGGTTATCGATACACCTGGACA 1988
| | |||| |||| ||| | |||||||||||| |||| ||||||||||||||||| ||
Sbjct 2169 CTGA-AAGCCGATGCAAAAATTAAGGTGCCAGGTCTATTAGTTATCGATACACCTGGCCA 2227
Query 1989 CGAGTCATTCACAAATCTGCGGTCAAGGGGTTCAAATTTGTGTGACCTTGCAATTCTAGT 2048
||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| | ||
Sbjct 2228 TGAGTCCTTCACGAATCTGCGGTCAAGAGGTTCAAGTTTGTGTGACCTTGCAATTTTGGT 2287
Query 2049 GGTTGATATAATGCGA-GG-TCTAGAGCCACAAACCATAGAATCTCTTAATCTTTTGAGA 2106
|||||| ||||||| | || | ||||||||||||||||||||||||| ||||||||||||
Sbjct 2288 GGTTGACATAATGC-ATGGGT-TAGAGCCACAAACCATAGAATCTCTAAATCTTTTGAGA 2345
Query 2107 A-GAAGGAATGTAAAGTTCATTATTGCCTTGAATAAGGTGGATAGGCTATATGGGTGGGA 2165
| || ||||| | |||||||| |||| ||||||||||||||| || ||||| ||| |
Sbjct 2346 ATGA-GGAATACAGAGTTCATTGTTGCATTGAATAAGGTGGATTTACTCTATGGATGG-A 2403
Query 2166 AAAAA-GCAAGAATGCTCCTATAAG-GAAGACAATGATGCAACAAACGGGAGATGTGGTT 2223
||| | |||||||||||||||| | |||| |||||| ||| ||||| |||||| |
Sbjct 2404 AAACATGCAAGAATGCTCCTATC-GTGAAGGCAATGAAGCAGCAAACTAAAGATGTTACT 2462
Query 2224 AAGGAATTTAAAATGAGGCTAAACCG-AGTTCAAAACC-AGTTCCAAGAA-CAAGGACTC 2280
|| |||||||| ||||||| | ||| | || | ||| | ||| ||| | ||||||||
Sbjct 2463 AATGAATTTAACTTGAGGCTGACCCGGA-TT-ATTACCCAATTC-AAGGAGCAAGGACTT 2519
Query 2281 AACA--GTATGCTTTATTACAAGAACAGAGAAATGGGAGAAACTATCAGTATCCTACCTG 2338
|||| | | |||||| |||||||| | ||||||||| |||||| ||||| | | |||
Sbjct 2520 AACACCG-A-GCTTTACTACAAGAATAAAGAAATGGGCGAAACTTTCAGTCTTGTTCCTA 2577
Query 2339 CTAGCGCTATTAGTGGGGAAGGGATTCCAGATCTTTTACTGTTCTTGGTTCAATGGGCTC 2398
|||| |||| || ||||||||||| |||||||| || ||||| ||||||||||||||||
Sbjct 2578 CTAGTGCTAAAAGCGGGGAAGGGATCCCAGATCTCTTGCTGTTGTTGGTTCAATGGGCTC 2637
Query 2399 AGAAAACGATGGTGGAGAAACTTACATATGTTGACAAAGTGCAGTGTACCGTCCTTGAGG 2458
||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||
Sbjct 2638 AGAAAACAATGGTTGAGAAACTTACTTATGTTGACAAAGTGAAGTGTACTGTCCTTGAGG 2697
Query 2459 TCAAAGTTATTGAAGGCCATGGTATTAC-AGTTGATGTTGTTTTGGTCAACGGTGTACTC 2517
|||||||||||||||||||||||| || | |||||||||| ||||| ||||||| ||||
Sbjct 2698 TCAAAGTTATTGAAGGCCATGGTACAACGA-TTGATGTTGTGTTGGTAAACGGTGAACTC 2756
Query 2518 CGTGAAGGTGATCAAATTGTTGTTTGTGGGTCACAGGGACCAATTGTAACAACTATTAGA 2577
| ||||||||||||||| || |||||||||| ||||||||| ||||| ||||| ||||||
Sbjct 2757 CATGAAGGTGATCAAATCGTCGTTTGTGGGTTACAGGGACCTATTGTCACAACGATTAGA 2816
Query 2578 TCATTGTTGACTCCTTATCCTATGAACGAGATGCGGGTGACGGGTACCTATATGCCTCAC 2637
|||| |||||||| |||| ||||| ||| | ||||||| |||||| ||| ||| | ||
Sbjct 2817 GCATTACTGACTCCTCATCCAATGAAGGAGTTACGGGTGAAGGGTACTTATCTGCATTAC 2876
Query 2638 AGAGAAGTAAAGGCTGCGCAGGGTATCAAAATTGCTGCACAGGGCCTTGAACACGCCATT 2697
| |||| |||||||||| ||||| ||||||||| | || ||||||||||||||||| |||
Sbjct 2877 AAAGAAATAAAGGCTGCACAGGGCATCAAAATTACCGCCCAGGGCCTTGAACACGCAATT 2936
Query 2698 GCTGGTACTGCCTTGCATGTGATTGGACCTAATGAGGACATGGAAG-AAGCCAAGAAAAA 2756
||||||||| || |||||||| |||||||| |||| ||||| || | || ||| |
Sbjct 2937 GCTGGTACTTCCCTGCATGTGGTTGGACCTGATGATGACATCGAGGCAATT-AAGGAGTC 2995
Query 2757 TGCCATGGAAGATATTGAGTCAGTTATGAACCGCATTGACAAAAGTGGTGAAGGCGTTTA 2816
|| ||||||||||| || |||||| ||| | | |||||||| ||||||||||| |||||
Sbjct 2996 GGCTATGGAAGATATGGAATCAGTTTTGAGCAGGATTGACAATAGTGGTGAAGGAGTTTA 3055
Query 2817 TGTACAAGCATCTACATTAGGGTCCTTGGAAGCATTGCTCGAGTTCTTGAAGTCCTCAGA 2876
||||||||| |||||||||||||| || ||||||||||| || |||||||||||| |||
Sbjct 3056 TGTACAAGCGTCTACATTAGGGTCATTAGAAGCATTGCTTGAATTCTTGAAGTCCCCAGC 3115
Query 2877 TGTAAAAATACCTGTCAGTGGTATTGGCATAGGACCTGTGCATAAGAAGGATATCATGAA 2936
|||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 3116 TGTAAATATACCTGTCAGTGGTATTGGCATAGGGCCTGTGCATAAGAAGGATATAATGAA 3175
Query 2937 GGCCGGGGTAATGCTAGAGAAGAAAAAAGAGTTTGCAACGATTTTGGCCTTTGATGTGAA 2996
||| || || ||||| ||||||||||| || | ||| || |||||||| ||||| |||||
Sbjct 3176 GGCTGGAGTGATGCTCGAGAAGAAAAAGGAATATGCTACAATTTTGGCTTTTGACGTGAA 3235
Query 2997 AATAAGTGCAGAAGCTCGTGAACTTGCAGACAAAATGGGAGTAAAAATCTTCTGCGATGA 3056
| | | | |||| |||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 3236 AGTGACTACAGAGGCTCGTGAACTTGCAGACGAAATGGGAGTAAAAATCTTCTGCGCTGA 3295
Query 3057 TACCATCTATTGTCTGTTCGATAAGTTTAAGAG-TTACATAGAGGGTATCAAAGAGGAGA 3115
|| ||||||| | | ||||| ||||||| | |||||| ||| ||||||||||||||
Sbjct 3296 TATCATCTATCATTTATTCGACCTGTTTAAG-GCTTACATTGAGAATATCAAAGAGGAGA 3354
Query 3116 AAAAGAAAGAAACAGCTTGTGAAGCAGTTTTCCCATGTATCCTTCAGATTTTACCAAACC 3175
||||||| ||| |||| |||| ||||| ||||||||| |||||||||||||||| |||
Sbjct 3355 AAAAGAAGGAATCAGCCGGTGAGGCAGTCTTCCCATGTGTCCTTCAGATTTTACCTAACT 3414
Query 3176 ATATCTACAATCAGAGGGACCCAATTATCCTTGGAGTTAAAGTCAATGATGGAATACTAA 3235
| | | |||| |||| |||||||| |||||||||||||| ||| | || || ||||| |
Sbjct 3415 GTGTGTTCAATAAGAGAGACCCAATAATCCTTGGAGTTAAGGTCCACGACGGTATACTTA 3474
Query 3236 AGGTTGGAACTCCCATTTGCATTGTTAAAAGGATTGAGAATGTAAGAGTGTTTATGGACA 3295
|| ||||||| ||||||||| || || | | | | |||| | || || |
Sbjct 3475 AGATTGGAACCCCCATTTGC---GTCCC--GG---GC-A--G-A-GAGT-TC-ATCGATA 3519
Query 3296 TTGGGCGCGTCT-CATCAATTAAGAATAACAACAACATGCCAGTTGATTATGCAAGGAAA 3354
|||| ||| | | | || || |||| ||| |||| ||| || |||||||||| |||
Sbjct 3520 TTGGCCGCAT-TGCCTCTATCGAGAACAACCACAA---GCCTGTGGATTATGCAAAGAAG 3575
Query 3355 GGAC-AGGAGGTGGCTATTAAGATCATTGCTTCTAACCCAGAAGAACAGAAAATGTTTGG 3413
|| | |||||||||| |||||||| ||||||| || | ||||||||||| ||||||||
Sbjct 3576 GG-CGAGGAGGTGGCGATTAAGATTGTTGCTTCAAATCGTGAAGAACAGAAGATGTTTGG 3634
Query 3414 GAGGCACTTTGGTGTAGACGAC-AGGCTTATCAGTCACATTTCTAGTCGATCC 3465
|||||||||| | || || || ||| | ||||||||||| || |||||
Sbjct 3635 AAGGCACTTTGACATGGAAGATGAG-CTTGTGAGTCACATTTCGAGGAGATCC 3686
> Ahg900570 jgi|Araly1|900570|Al_scaffold_0004_1220
Length=1383
Score = 1062 bits (575), Expect = 0.0
Identities = 1087/1330 (82%), Gaps = 52/1330 (4%)
Strand=Plus/Plus
Query 1755 AGAAAATCTTCGCTCTCCAATTTGCTGCATCATGGGTCATGTTGATTCTGGTAAAACAAA 1814
||||||| | |||||||| ||||| ||||||||||||||| | ||| |||||||||||||
Sbjct 33 AGAAAATGTCCGCTCTCCCATTTGTTGCATCATGGGTCATATCGATACTGGTAAAACAAA 92
Query 1815 GCTGTTGGATTGCATCAGAGGAACAAATGTTCAGGAAGGTGAAGCTGGAGGTATTACTCA 1874
| ||||||||| ||||| ||||| |||||| || ||||| || |||||||||| |||||
Sbjct 93 GATGTTGGATTACATCATAGGAAGAAATGTACAAGAAGGCGAGGCTGGAGGTACCACTCA 152
Query 1875 ACAGATTGGTGCAACCTTTTTCCCTGCAGA-AAACATCCGT-GAGAGGACCAAAG-AGTT 1931
| ||||||||||||| | | || | || || |||||||| | |||| ||||| | | |
Sbjct 153 AAAGATTGGTGCAACATATCTCTCAGC-GAGAAACATCC-TAGAGAAGACCATGGAACTG 210
Query 1932 ACAAGCTAATGCTAAACTCAAGGTGCCAGGTATATTGGTTATCGATACACCTGGACACGA 1991
| || | |||| |||||||| ||||||||| ||||| |||||||||||||||| | ||
Sbjct 211 A-AATCCGATGCAAAACTCAATGTGCCAGGTCTATTGTTTATCGATACACCTGGTTATGA 269
Query 1992 G-TCATTCACAAATCTGCGGTCAAGGGGTTCAAATTTGTGTGACCTTGCAATTCTAGTGG 2050
| || |||| ||||| || ||||| |||| || |||||||||| |||||||| | ||||
Sbjct 270 GTTC-TTCATGAATCTTCGTTCAAGAGGTTTAACTTTGTGTGACTTTGCAATTTTGGTGG 328
Query 2051 TTGATATAATGCGA--GGTCTAGAGCCACAAACCATAGAATCTCTTAATCTTTTG-AGAA 2107
||||| |||||| | ||| | || |||||||| ||||||| ||| ||||||||| | ||
Sbjct 329 TTGATGTAATGC-ATGGGT-TTGAACCACAAACTATAGAATGTCTAAATCTTTTGAAAAA 386
Query 2108 GAAGGAATGTAAAGTTCATTATTGCCTTGAATAAGGTGGATAGGCTATATGGGTGGGAAA 2167
| |||||| || ||||||||||||| |||| ||||||||||||||||||||| | |||||
Sbjct 387 G-AGGAATATAGAGTTCATTATTGCATTGACTAAGGTGGATAGGCTATATGGAT-GGAAA 444
Query 2168 A-AAGCAAGAATGCTCCTATAAGGAAGACAATGATGCAACAAACGGGA-GATG-TGGTTA 2224
| | ||||||||||||| | |||| |||||| ||||||||| | |||| | | |
Sbjct 445 ACTTGTGAGAATGCTCCTATCATGAAGGCAATGAAGCAACAAAC-TAACGATGTTAG-AA 502
Query 2225 AGGAATTTAAAATGAGGCTAAACCGAG-TTCA-AAACCAGTTCCAA-GAACAAGGACTCA 2281
| |||||||| |||||||| || ||| || | | ||||||| || || ||||||||||
Sbjct 503 ATGAATTTAACATGAGGCTGAA-TGAGATT-ATAGACCAGTT-TAAGGAGCAAGGACTCA 559
Query 2282 ACAGT-ATGCTTTATTACAAGAACAGAGAAATGGGAGAAACTATCAGTATCCTACCTGCT 2340
||| | | ||||||||||||||| | ||||||| |||||||| | ||||| | ||| ||
Sbjct 560 ACACTGA-GCTTTATTACAAGAATAAAGAAATGAGAGAAACTTTTAGTATTGTTCCTACT 618
Query 2341 AGCGCTATTAGTGGGGAAGGGATTC-CAGATCTTTTACTGTTCTTGGTTCAATGGGCTCA 2399
|| ||||||||||| ||||| | || ||||||| || |||| |||||||||| | ||||
Sbjct 619 AGTGCTATTAGTGGAGAAGGCA-TCTCAGATCTCTTGTTGTTATTGGTTCAATTGTCTCA 677
Query 2400 GAAAACGA-TGG-TGGAGAAACTTACATATGTTGACAAAGTGCAGTGTACCGTCCTTGAG 2457
|||||| | ||| |||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 678 GAAAAC-AGTGGTTGGA-AAACTTACATATGTTGACAAAGTGCAGTGTATTGTCCTTGAG 735
Query 2458 GTCAAAGTTATTGAAGGCCATGGTATTAC-AGTTGATGTTGTTTTGGTCAACGGTGTACT 2516
|||||||| || ||||| |||||| || | |||||||||| ||||| ||||||| |||
Sbjct 736 GTCAAAGTCATGGAAGGATATGGTACAACGA-TTGATGTTGTGTTGGTAAACGGTGAACT 794
Query 2517 CCGTGAAGGTGATCAAATTGTTGTTTGTGGGTC-ACAGGGACCAATTGTAACAACTATTA 2575
|| ||||||||||||||| || |||||||| || ||||||||| ||||| ||||| ||||
Sbjct 795 CCATGAAGGTGATCAAATCGTCGTTTGTGG-TCTACAGGGACCTATTGTCACAACGATTA 853
Query 2576 GATCATTGTTGACTCCTTATCCTATGAACGAGATGCGGGTGACGGGTAC-CTATATGCCT 2634
|| |||| |||||||| |||| || || ||| | | |||| |||| | || ||| |
Sbjct 854 GAGCATTACTGACTCCTCATCCAATCAAGGAGTTACATGTGAATGGTAATC-ATGTGCAT 912
Query 2635 CACAGA-G-AAGTAAAGGCTGCGCAGGGTATCAAAATTGCTGCACAGGGCCTTGAACACG 2692
||| || | || || || |||| ||| ||||||| ||| ||| ||||||||||||||||
Sbjct 913 CAC-GAAGTAATTACAG-CTGCACAGTGTATCAATATTATTGCCCAGGGCCTTGAACACG 970
Query 2693 CCATTGCTGGTACTGCCTTGCATGTGATTGGACCTAATGAGGACATGGAAG-AAGCCAAG 2751
| |||| |||||| ||||||||||| |||||||| |||| ||||| |||| || |||
Sbjct 971 CAATTGTTGGTACCACCTTGCATGTGGTTGGACCTGATGATGACATCGAAGCAATT-AAG 1029
Query 2752 AAAAATGCC-ATGGAAGATATTGAGTCAGTTATGAACCGCATTGACAAAAGTGGTGAAGG 2810
| || ||||||||||| |||||| || ||| | | ||||||| ||||||||||||
Sbjct 1030 GAGT-TGGTTATGGAAGATATAGAGTCAATTTTGAGCAGGATTGACACAAGTGGTGAAGG 1088
Query 2811 CGTTTATGTACAAGCATCTACATTAGGGTCCTTGGAAGCATTGCTCGAGTTCTTGAAGTC 2870
|||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1089 AGTTTATGTACAAGCGTCTACATTAGGGTCCTTGGAAGCATTGCTTGAATTCTTGAAGTC 1148
Query 2871 CTCAGATGTAAAAATACCTGTCAGTGGTATTGGCATAGGACCTGTGCATAAGAAGGATAT 2930
| ||| |||||| ||||||| |||||||||||||||| |||||||| |||||||||||
Sbjct 1149 CCCAGCTGTAAAGTTACCTGTTGGTGGTATTGGCATAGGGCCTGTGCAAAAGAAGGATAT 1208
Query 2931 CATGAAGGCCGGG-GTAATGCTAGAGAAGAAAAAAG-AGTTTGCAACGATTTTGGCCTTT 2988
|||||||| ||| || ||||| |||| |||||||| | ||||| || || ||||| |||
Sbjct 1209 AATGAAGGC-GGGAGTGATGCTCGAGA-GAAAAAAGGAATTTGCTACAATATTGGCTTTT 1266
Query 2989 GATGTGAAAATAAGTGCAGAAGCTCGTGAACTTGCAGACAAAATGGGAGTAAAAATCTTC 3048
|| |||||| | | | |||| |||||||||||||||||| |||||||||| ||||||||
Sbjct 1267 GACGTGAAAGTGACTACAGAGGCTCGTGAACTTGCAGACGAAATGGGAGTTAAAATCTTA 1326
Query 3049 TGCGATGATA 3058
|||| |||||
Sbjct 1327 TGCGCTGATA 1336
> Ahg476840 jgi|Araly1|476840|fgenesh2_kg.2__1970__AT1G76810.1
Length=4134
Score = 1053 bits (570), Expect = 0.0
Identities = 1382/1754 (79%), Gaps = 135/1754 (8%)
Strand=Plus/Plus
Query 894 GAAGAAAGATGTAAAGATTAAAGTAGCGGAAAAGAAAGTTCCTAAACATGTTCGagagaa 953
|||||| |||| |||| ||||| ||| || |||||| |||||||||||||| ||||||
Sbjct 1051 GAAGAAGGATGCAAAGGGTAAAGCAGCAGAGAAGAAAATTCCTAAACATGTTAGAGAGAT 1110
Query 954 gcaagagactcttgcgcggtggaaagaagctgaagatg-ggaagaagaaggaagaagaag 1012
||||||| ||||||| ||| || ||||||| ||||| | | || ||||||||||||||||
Sbjct 1111 GCAAGAGGCTCTTGCACGGCGGCAAGAAGCCGAAGA-GAGAAAAAAGAAGGAAGAAGAAG 1169
Query 1013 agagattgaggaaagaggaagaggagcgccgtatag-aggaagagcgagaaagg--gaag 1069
| | ||||||||| ||||||||||||||||| | | ||||||||| | ||| |||
Sbjct 1170 AAAAATTGAGGAAGGAGGAAGAGGAGCGCCGCA-GGCAGGAAGAGCTTG--AGGCTCAAG 1226
Query 1070 ctgaaga-gattag-g-caga-aga-g-aaa-gatcagga-aaa-tg--gag-aagaagc 1117
|||| || | || | ||| | | | ||| || |||| ||| || ||| |||||||
Sbjct 1227 CTGAGGAGGCCAAGCGTAAGAGAAAGGAAAAGGAAAAGGAGAAACTGTTGAGAAAGAAGC 1286
Query 1118 aagaagGCCTGATTCTAACAGCAAAGCAAAAGCGTGATGCTGC-TAAGAATGAGGC-TTT 1175
|||| ||| | |||||||||||||||||||| |||| ||| | |||| ||||| |||
Sbjct 1287 AAGAGGGCAAGCTTCTAACAGCAAAGCAAAAGAGTGAAGCT-CAAAAGAGGGAGGCTTTT 1345
Query 1176 CAGAAAAAGGGTGTTGACTGATGCTGGAAGTCTTCTTGTTGCAGATAA-AAACG-G-TG- 1231
|||| | | | || ||| || |||| |||||| |||||||||||| | | | ||
Sbjct 1346 AAGAACCA-GCTACTGGCTGCTGGTGGAGGTCTTCCTGTTGCAGATAATGATGGTGATGC 1404
Query 1232 -A-TTCCTCAAAACGTCCCATATATGGCAATAA-AAACAAATTAGCTTG-CAAAAAAGCA 1287
| ||||||||| |||||||| |||| ||| || ||| |||| |||| | || ||| ||
Sbjct 1405 TACTTCCTCAAAGCGTCCCATTTATGCCAACAAGAAA-AAATCAGCTCGCCAGAAAGGC- 1462
Query 1288 AACGATCCTGCTTCTGTCCAGGCTAAAGGTGATGGGGA-AACC-AAGGAAAATCATGCAG 1345
| || ||||||| |||| ||| ||| || | | || || || ||||| | |
Sbjct 1463 ATTGA---AACTTCTGTTCAGGGGGAAGATGA--GGTAGAGCCAAAAGAGAATCA--C-G 1514
Query 1346 CAGATGAACCATG-TACTTTACCTGACTTG-GTTTCAGTTGAAGA-TAGAAGGGTTGGTA 1402
||| ||||||| | ||||||| ||| || |||| | | | | | ||| ||||| |
Sbjct 1515 CAGGTGAACCA-GATACTTTAGGTGAAGTGAGTTT-AACAG-ACACTGGAAAGGTTGAT- 1570
Query 1403 TT-ATCGAATCAGTAGACACAGAAG-AGACACATGAATCTGTTGATGTATCACAAGAGAA 1460
|| || || |||||| ||||||| | | | || | | ||| ||||||| | || |||||
Sbjct 1571 TTAATAGAGTCAGTAAACACAGACGAAAATTCA-GGACCTGCTGATGTAGCTCAGGAGAA 1629
Query 1461 T--GGT-------GATGA-G--GAAGATGTGTGGGATGC-AAAAAC-----TA-A--T-- 1497
| ||| ||||| | ||||||| |||||||| |||| | || | |
Sbjct 1630 TGGGGTGGAGGAAGATGATGAAGAAGATGAATGGGATGCGAAAAGCTGGGATACAGTTGA 1689
Query 1498 T-TTACCATCAAGGGTGATTCTGATGATGAGGAGGAAAAACCTCAGCCTGT-GTTCAAGA 1555
| ||| ||| || ||||||| |||||| || |||||| || |||||||||| ||| ||||
Sbjct 1690 TCTTAACATTAAAGGTGATTTTGATGACGAAGAGGAAGAAGCTCAGCCTGTGGTT-AAGA 1748
Query 1556 AAGGTTTAAAAGACACTGCATCAAAGGCACATGATTCAGTTCCTGGCGCAGATAGACCAA 1615
||| ||||| || || |||||||| |||||||||| |||| || || | ||||
Sbjct 1749 AAGAATTAAAGGATGCTATATCAAAGGTGCATGATTCAGAACCTGAAGCTGAAAAACCAG 1808
Query 1616 CA-GTGAAGCCTGGAGGTTCTGGCAAGCCAAAAACAGCTGCCAAAAAAGCTATGCCT-AA 1673
|| || || || | || | | |||||||||| || ||||||| |||||||| |||| ||
Sbjct 1809 CAGGT-AAACCAGCAGATACAGGCAAGCCAACAATAGCTGCCGTAAAAGCTACGCCTGAA 1867
Query 1674 GGTGGATGATACT--AC---C----CG-G----CC--G--AAAGATACTTCTAAAAAGGA 1715
||||| ||| || || | || | || | |||||| | ||||| |||||
Sbjct 1868 -GTGGAAGATGCTACACGGACAAAACGTGCTATCCGAGCAAAAGATGCCTCTAAGAAGGA 1926
Query 1716 TGAAGGCTTAGTACT-GAATGA-ACTTGCTAAAGA-AGTAGAAGAAAATCTTCGCTCTCC 1772
| ||||||||| || || || | | ||| ||| || ||||||||||| ||||||||
Sbjct 1927 TAAAGGCTTAG--CTCCAA-GAGA-AT-CTATAGAGGGT-GAAGAAAATCTCCGCTCTCC 1980
Query 1773 AATTTGCTGCATCATGGGTCATGTTGATTCTGGTAAAACAAAGCTGTTGGATTGCATCAG 1832
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1981 CATTTGCTGCATCATGGGTCATGTCAATACTGGTAAAACAAAGCTGTTGGATTGCATCAG 2040
Query 1833 AGGAA-CAAATGTTCAGGAAGGTGAAGCTGGAGGTATTACTCAACAGATTGGTGCAACCT 1891
||||| ||| ||| |||||||| || ||||||||||||||||| |||||||||||||| |
Sbjct 2041 AGGAAACAA-TGTACAGGAAGGCGAGGCTGGAGGTATTACTCAGCAGATTGGTGCAACAT 2099
Query 1892 TTTTCCCTGCAGAAAACATCCGTGAGAGGACCAAAGAGTT-ACAAGCTAATGCTAAACTC 1950
|||||| || || |||||||| |||||||||| || | | |||| |||| ||||||
Sbjct 2100 ATTTCCCAGCGGAGAACATCCGAGAGAGGACCAGGGAACTGA-AAGCCGATGCAAAACTC 2158
Query 1951 AAGGTGCCAGGTATATTGGTTATCGATACACCTGGACACGAGTCATTCACAAATCTGCGG 2010
|| ||||||||| |||||||||| ||||||||||| |||||||| ||||| |||||||||
Sbjct 2159 AAAGTGCCAGGTCTATTGGTTATTGATACACCTGGCCACGAGTCCTTCACGAATCTGCGG 2218
Query 2011 TCAAGGGGTTCAAATTTGTGTGACCTTGCAATTCTAGTGGTTGATATAATGCGA-GG-TC 2068
||||| ||||||| ||||||||||||||| ||| | |||||||| ||||||| | || |
Sbjct 2219 TCAAGAGGTTCAAGTTTGTGTGACCTTGCGATTTTGGTGGTTGACATAATGC-ATGGGT- 2276
Query 2069 TAGAGCCACAAACCATAGAATCTCTTAATCTTTTGAGAA-GAAGGAATGTAAAGTTCATT 2127
||||||||||||||||||||||||| ||||||||||||| || ||||| | ||||||||
Sbjct 2277 TAGAGCCACAAACCATAGAATCTCTAAATCTTTTGAGAATGA-GGAATACAGAGTTCATT 2335
Query 2128 ATTGCCTTGAATAAGGTGGATAGGCTATATGGGTGGGAAAAAA-GCAAGAATGCTCCTAT 2186
||||| |||||||||||||||||||||||||| ||| |||| | ||||||||||||||||
Sbjct 2336 ATTGCATTGAATAAGGTGGATAGGCTATATGGATGG-AAAACATGCAAGAATGCTCCTAT 2394
Query 2187 AAG-GAAGACAATGATGCAACAA-ACGGGAGATGTGGTTAAGGAATTTAAAATGAGGCTA 2244
| |||| |||||| ||| ||| | |||||| || |||||||||||||||||
Sbjct 2395 C-GTGAAGGCAATGAAGCAGCAAGAAAA-AGATGTTACAAATGAATTTAAAATGAGGCTG 2452
Query 2245 AACCGAG-TTCAAAACCAGTTCCAAGAA-CAAGGACTCAACAGT-ATGCTTTATTACAAG 2301
| | || || ||||||||||||| ||| ||||||||||||| | | |||||||||||||
Sbjct 2453 A-CTGATATTAAAAACCAGTTCCA-GAAGCAAGGACTCAACACTGA-GCTTTATTACAAG 2509
Query 2302 AACAGAGAAATGGGAGAAACTATCAGTATCCTACCTGCTAGCGCTATTAGTGGGGAAGGG 2361
|| | |||||||||||||||| ||||| | | ||| |||| |||||||| |||||||||
Sbjct 2510 AATAAAGAAATGGGAGAAACTTTCAGTCTTGTTCCTACTAGTGCTATTAGCGGGGAAGGG 2569
Query 2362 ATTCCAGATCTTTTACTGTTCTTGGTTCAATGGGCTCAGAAAACGATGGTGGAGAAACTT 2421
| |||||||| || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 2570 GTCCCAGATCTCTTGCTGTTATTGGTTCAATGGGCTCAGAAAACAATGGTTGAGAAACTT 2629
Query 2422 ACATATGTTGACAAAGTGCAGTGTACCGTCCTTGAGGTCAAAGTTATTGAAGGCCATGGT 2481
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2630 ACATATGTTGACGAAGTGCAGTGTACTGTCCTTGAGGTCAAAGTTATTGAAGGCCATGGT 2689
Query 2482 ATTACAGTTGATGTTGTTTTGGTCAACGGTGTACTCCGTGAAGGTGATCAAATTGTTGTT 2541
| ||| |||||||||| ||||| ||||||| ||||| ||||||||||||||| || |||
Sbjct 2690 ACAACAATTGATGTTGTGTTGGTAAACGGTGAACTCCATGAAGGTGATCAAATCGTCGTT 2749
Query 2542 TGTGGG-TCACAGG 2554
|||||| | |||||
Sbjct 2750 TGTGGGCT-ACAGG 2762
> Ahg921553 jgi|Araly1|921553|scaffold_102834.1
Length=2066
Score = 856 bits (463), Expect = 0.0
Identities = 622/695 (89%), Gaps = 26/695 (4%)
Strand=Plus/Plus
Query 2141 AGGTGGATAGGCTATATGGGTGGG-AAAAAAGCAAGAATGCTCCTATAAGGAAGACAATG 2199
||||||||| | ||| |||||||| |||||||||||||||||||| || ||||||||||
Sbjct 865 AGGTGGATACGATATGTGGGTGGGAAAAAAAGCAAGAATGCTCCTCTATTGAAGACAATG 924
Query 2200 ATGCAACAAACGGGAGATGTGGTTAAGGAATTTAAAATGAG-GCTAAACCGA-GTTCAAA 2257
| ||||||| || ||||||||||||| |||||||| ||||| | || | | | ||| |||
Sbjct 925 AAGCAACAATCGAGAGATGTGGTTAATGAATTTAACATGAGAG-TAGATC-ATGTT-AAA 981
Query 2258 A-CCAGTTCCAAGAACAAGGACTCAACAGTATGCTTTATTACAAGAACAGAGAAATGGGA 2316
| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| |
Sbjct 982 ACCCAGTTCCAAGAACAAGGAATCAATTGTATGCTTTATTACAAGAACAAAGAAATGGAA 1041
Query 2317 GAAACTATCA-GTATCCTACCTGCTAGCGC---TA--T-T-AG--------TGGGGAAGG 2360
|||||||| | |||| ||||| ||||||| || | | || |||||||||
Sbjct 1042 GAAACTAT-ATGTATTGTACCTACTAGCGCTATTAGGTCTCAGATTTTTTTTGGGGAAGG 1100
Query 2361 GATTCCAGAT-CTTTTACTGTTCTTGGTTCAATGGGCTCAGAAAACGATGGTGGAGAAAC 2419
||| |||||| |||| | |||| ||||||| ||||||||||||||| |||||||||||||
Sbjct 1101 GATCCCAGATCCTTTGA-TGTTGTTGGTTCTATGGGCTCAGAAAACAATGGTGGAGAAAC 1159
Query 2420 TTACATATGTTGACAAAGTGCAGTGTACCGTCCTTGAGGTCAAAGTTATTGAAGGCCATG 2479
| ||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 1160 TCACATATGTTGATAAAGTGCAGTGTACTGTCCTTGAGGTCAAAGTTATTGAAAGCCATG 1219
Query 2480 GTATTACAGTTGATGTTGTTTTGGTCAACGGTGTACTCCGTGAAGGTGATCAAATTGTTG 2539
||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||| ||||
Sbjct 1220 GTATTACTGTTGATGTTGTTTTGCTCAACGGTGTACTCCGTGAAGCTGATCAAATCGTTG 1279
Query 2540 TTTGTGGGTCACAGGGACCAATTGTAACAACTATTAGATCATTGTTGACTCCTTATCCTA 2599
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1280 TTTGTGGGTCACAGGGACCAATTGTAACAACTATTAGATCATTATTGACTCCTTATCCTA 1339
Query 2600 TGAACGAGATGCGGGTGACGGGTACCTATATGCCTCACAGAGAAGTAAAGGCTGCGCAGG 2659
||||||||| |||||||| ||||||||||||| | ||||| |||||||||||||| ||||
Sbjct 1340 TGAACGAGACGCGGGTGAAGGGTACCTATATGGCACACAGGGAAGTAAAGGCTGCACAGG 1399
Query 2660 GTATCAAAATTGCTGCACAGGGCCTTGAACACGCCATTGCTGGTACTGCCTTGCATGTGA 2719
||||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||
Sbjct 1400 GTATCAAAATTGCAGCACCGGGCCTTGAACACGCTATTGCTGGTACTACCTTGCATGTGA 1459
Query 2720 TTGGACCTAATGAGGACATGGAAGAAGCCAAGAAAAATGCCATGGAAGATATTGAGTCAG 2779
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1460 TTGGACCTAATGAGGACATGGAAGAAGCCAAGAAAAATGCCATGGAAGATATTGAATCAG 1519
Query 2780 TTATGAACCGCATTGACAAAAGTGGTGAAGGCGTT 2814
||||||||||||||||||||||||||||||| |||
Sbjct 1520 TTATGAACCGCATTGACAAAAGTGGTGAAGGAGTT 1554
Score = 619 bits (335), Expect = 4e-176
Identities = 383/407 (94%), Gaps = 0/407 (0%)
Strand=Plus/Plus
Query 1739 TTGCTAAAGAAGTAGAAGAAAATCTTCGCTCTCCAATTTGCTGCATCATGGGTCATGTTG 1798
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 380 TTGCTAAAGAAGTAGAAGAAAATCTTCGCTCTCCCATTTGCTGCATCATGGGTCATGTTG 439
Query 1799 ATTCTGGTAAAACAAAGCTGTTGGATTGCATCAGAGGAACAAATGTTCAGGAAGGTGAAG 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 ATTCTGGTAAAACAAAGCTGTTGGATTGCATCAGAGGAACAAATGTTCAGGAAGGTGAAG 499
Query 1859 CTGGAGGTATTACTCAACAGATTGGTGCAACCTTTTTCCCTGCAGAAAACATCCGTGAGA 1918
|||||| |||||||||||||||| ||||||| | ||||||||||||||||||||||||||
Sbjct 500 CTGGAGTTATTACTCAACAGATTAGTGCAACATATTTCCCTGCAGAAAACATCCGTGAGA 559
Query 1919 GGACCAAAGAGTTACAAGCTAATGCTAAACTCAAGGTGCCAGGTATATTGGTTATCGATA 1978
||||||| ||||||| ||| ||||||||||||| || ||||| |||||||||||||||
Sbjct 560 GGACCAAGGAGTTACGTGCTGGTGCTAAACTCAAGTTGTCAGGTCTATTGGTTATCGATA 619
Query 1979 CACCTGGACACGAGTCATTCACAAATCTGCGGTCAAGGGGTTCAAATTTGTGTGACCTTG 2038
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 620 CACCTGGACACGAGTCATTCACAAATCTGTGGTCAAGGGGTTCAAATTTGTGTGACTTTT 679
Query 2039 CAATTCTAGTGGTTGATATAATGCGAGGTCTAGAGCCACAAACCATAGAATCTCTTAATC 2098
|||||| ||||||||| |||||| | |||||||||||||||||| |||||||||| ||||
Sbjct 680 CAATTCCAGTGGTTGACATAATGTGTGGTCTAGAGCCACAAACCTTAGAATCTCTGAATC 739
Query 2099 TTTTGAGAAGAAGGAATGTAAAGTTCATTATTGCCTTGAATAAGGTG 2145
|||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 740 TTTTGAGAAGAAGGAATGTAAAGTTCGTTGTTGCCTTGAATAAGGTG 786
Score = 158 bits (85), Expect = 4e-37
Identities = 108/119 (91%), Gaps = 2/119 (2%)
Strand=Plus/Plus
Query 1565 AAGACACTGCATCAAAGGCACATGATTCAGTTCCTGGCGCAGATAGACCAACAGTGAAGC 1624
|||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 113 AAGACAATGCATCAAAGTCGCATGATTCAGTTCCTGGCGCAGATAGACCAACAGTGAAGC 172
Query 1625 CTGGAGGTT-CTGGCAAGCCAAAAACAGCTGCCAAAAAAGCTATGCCTAAGGTGGATGA 1682
|||||| || ||||||||||||||||| || || ||||||||||||| |||||||||
Sbjct 173 CTGGAG-TTGCTGGCAAGCCAAAAACAAATGTCATAAAAGCTATGCCTCGGGTGGATGA 230
Score = 152 bits (82), Expect = 2e-35
Identities = 107/119 (90%), Gaps = 2/119 (2%)
Strand=Plus/Plus
Query 1565 AAGACACTGCATCAAAGGCACATGATTCAGTTCCTGGCGCAGATAGACCAACAGTGAAGC 1624
|||| | |||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 254 AAGATAATGCATCAAAGTCGCATGATTCAGTTCCTGGTGCAGATAGACCAACAGTGAAGC 313
Query 1625 CTGGAGGTTCT-GGCAAGCCAAAAACAGCTGCCAAAAAAGCTATGCCTAAGGTGGATGA 1682
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Sbjct 314 CTGGAG-TTGTTGGCAAGCCAAAAACAGATGTCATAAAAGCTATGCCTCAGGTGGATGA 371
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140698847381
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5