BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G21270.1
Length=2469
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472363 jgi|Araly1|472363|fgenesh2_kg.1__2317__AT1G21270.1 3269 0.0
Ahg921093 jgi|Araly1|921093|scaffold_102374.1 1628 0.0
Ahg921094 jgi|Araly1|921094|scaffold_102375.1 806 0.0
Ahg911962 jgi|Araly1|911962|Al_scaffold_0001_2216 737 0.0
Ahg472361 jgi|Araly1|472361|fgenesh2_kg.1__2315__AT1G21245.1 372 8e-102
> Ahg472363 jgi|Araly1|472363|fgenesh2_kg.1__2317__AT1G21270.1
Length=2396
Score = 3269 bits (1770), Expect = 0.0
Identities = 2206/2416 (91%), Gaps = 32/2416 (1%)
Strand=Plus/Plus
Query 66 gaTGAAGGTACAGGAGGGTTTGTTCGTGGTGGCTGTTTTCTACCTTGCTTATACGCAGCT 125
||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1 GATGAAGGTGCAGGAGGGTTTGTTCTTGGTGGCTATTTTCTACCTTGCTTATACGCAGCT 60
Query 126 AGTCAAGGGGCAACCTCGCAAGGAGTGCCAAACTAGATGTGGCAATGTCGCAGTTGAGTA 185
|||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||
Sbjct 61 AGTCAAGGGGCAACCTCGCAAGGATTGCCAAACTAGATGTGGCGATGTTGCAGTTGAGTA 120
Query 186 CCCTTTTGGTACTTCTCCAGGTTGTTACTATCCCGGAGATGAAAGTTTCAATCTTACTTG 245
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 121 CCCTTTTGGCACTTCTCCAGGTTGTTACTATCCCGGAGATGATAGTTTCAATCTTACTTG 180
Query 246 CAACGAGCAAGAGAAGCTCTTCTTTGGCAACATGCCAGTCATCAACATGTCTCTCAGCGG 305
||||||| || || |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 181 CAACGAG-AA-AG-AGCTCTTCTTTGGCAACATGCCAGTCATCAACATTTCTCTCAGCGG 237
Query 306 CCAGCTTCGTGTTCGGCTAGTTAGATCCAGAGTTTGCTACGATAGTCAAGGAAAACAGAC 365
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 238 CCAGCTTCGTGTTCGGCTAGTTAGATCCAAAGTTTGCTACGACAGTCAAGGAAAACAGAC 297
Query 366 TGACTACATTGCCCAGCGGACCACCCTGGGTAATTTCACTCTCTCTGAACTTAACAGATT 425
||||||||| | || | |||| ||||||||||| | ||||||||||||| |||| |||
Sbjct 298 TGACTACATGGACCGGAAGACCTCCCTGGGTAATCTAACTCTCTCTGAACACAACAAATT 357
Query 426 TACTGTAGTAGGTTGTAACAGTTACGCATTTCTCCGCACATCTGGAGTTGAAAAATACTC 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 TACTGTAGTAGGTTGTAACAGTTACGCATTTCTCCGCACATCTGGAGTTGAAAAATACTC 417
Query 486 AACTGGATGCATATCAATATGTGATTCTG-CCACAACGAAAAACGGATCATGTTCTGGTG 544
|||||||||||||||| | |||||||||| || || ||||||| ||||||||||||||||
Sbjct 418 AACTGGATGCATATCATTGTGTGATTCTGTCC-CATCGAAAAAAGGATCATGTTCTGGTG 476
Query 545 AAGGTTGCTGCCAGATCC-CTGTCCCTAGA-GGATACTCTTTTGTCAGAGTAAAACCACA 602
||||||||||||||| || ||||||||||| ||| || |||||||||||||||||||||
Sbjct 477 AAGGTTGCTGCCAGA-CCTCTGTCCCTAGAGGGA-GCTATTTTGTCAGAGTAAAACCACA 534
Query 603 TAGCTTTCACAACCATCCTACTGTGCATCTGTTTAATCCTTGCACCTACGCCTTTCTCGT 662
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 TAGCTTTGACAACCATACTACTGTGCATCTGTTTAATCCTTGCACCTACGCCTTTCTCGT 594
Query 663 TGAAGATGGTATGTTTGACTTCCATGCTTTGGAAGATCTCAACAATCTGCGAAATGTTAC 722
||||||||||| |||||| ||| ||||||||||||||||||||||||| || |||||||
Sbjct 595 TGAAGATGGTAAGTTTGATTTCTATGCTTTGGAAGATCTCAACAATCTCCGGTATGTTAC 654
Query 723 TACGTTCCCTGTAGTACTAGATTGGTCTATCGGAGACAAGACTTGCAAACAAGTAGAATA 782
|||||||||||||||||||||||||||||| ||| || |||| ||| | ||||| | |
Sbjct 655 TACGTTCCCTGTAGTACTAGATTGGTCTATTGGAAACGAGACATGCGAGCAAGTTGTAGG 714
Query 783 CAGGGGCGTGTGTGGTGGTAACAGCACATGTTTCGATTCTACTGGTGGAACCGGGTATAA 842
||| | | |||||||| ||||| |||||||| |||||||| ||||||||||||||||
Sbjct 715 CAGAAACATATGTGGTGGGAACAGTACATGTTTTAATTCTACTCGTGGAACCGGGTATAA 774
Query 843 CTGCAAATGTTTAGAAGGTTTTGAGGGGAATCCATACCTTCCAAACGGTTGTCAAGACAT 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 CTGCAAATGTTTAGAAGGTTTTGAGGGGAATCCATACCTTCCAAACGGTTGTCAAGACAT 834
Query 903 CAATGAATGTATTAGTAGTAGACATAACTGTTCGGAGCATAGTACCTGTGAAAACACGAA 962
|||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct 835 CAATGAGTGTATTAATAGTAGACATAACTGTTCGGAGCCTAGTACCTGTGAAAATATGAA 894
Query 963 GGGGAGCTTCAACT-GTAACTGCCCATCTGGTTACCGCAAAGATTCCCTTAATAGCTGTA 1021
||| ||||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 895 GGGAAGCTTCA-CTTGTAACTGCCCATCTGGTTACCGCAAAGATTCCCCTAATAGCTGTA 953
Query 1022 CTCGTAAAGTCAGGCCTGAATACTTTAGATGGACTCAAATTTTTCTTGGAACCACCATCG 1081
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 CTCGTAAAGTTAGGCCTGAATACTTTAGATGGACTCAAATTTTTCTTGGAACCACCATCG 1013
Query 1082 GCTTCTCGGTTATCATGCTTGGGATTAGCTGTCTACAACAGAAAATTA-AGCACCGGAAG 1140
|||||||||| ||| ||||||| |||| |||| ||||||||||||||| | |||| ||||
Sbjct 1014 GCTTCTCGGTCATCCTGCTTGGCATTATCTGTGTACAACAGAAAATTAGA-CACCAGAAG 1072
Query 1141 AACACAGAGCTCCGACAAAAATTCTTCGAGCAAAATGGTGGAGGCATGTTGATACAGCGA 1200
|||| ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||
Sbjct 1073 GACACCGAGCTCCGACAAAAATTCTTCGAGCAAAACGGTGGTGGCATGTTGATAGAGCGA 1132
Query 1201 GTCTCGGGAGCAGGGCCATCAAATGTTGATGTCAAAATCTTCACTGAGAAAGGAATGAAG 1260
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1133 GTCTCAGGAGCAGGGCCATCAAATGTTGATGTCAAAATCTTCACTGAGGAAGGAATGAAG 1192
Query 1261 GAAGCAACTAATGGTTACCATGAGAGCAGAATCCTGGGTCAGGGAGGCCAAGGAACAGTG 1320
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 GAAGCAACTAATGGTTATGATGAGAGCAGAATCCTGGGTCAGGGAGGCCAAGGAACAGTC 1252
Query 1321 TACAAAGGGATATTGCCGGACAACTCCATAGTTGCTATAAAGAAAGCTCGGCTTGGAAAC 1380
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 1253 TACAAAGGGATATTGCCAGACAATTCCATAGTTGCTATAAAGAAAGCTCGGCTTGGAGAC 1312
Query 1381 CGTAGCCAAGTAGAGCAGTTCATCAACGAAGTGCTAGTGCTTTCACAAATCAACCATAGG 1440
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1313 TGTAGCCAAGTAGAGCAGTTCATCAACGAAGTGCTCGTGCTTTCACAAATCAACCATAGG 1372
Query 1441 AACGTGGTCAAGGTCTTGGGGTGTTGTTTAGAGACAGAAGTCCCCTTGTTGGTCTATGAG 1500
|||||||||||| ||||||| |||||| ||||||| ||||| ||||||||||||||||||
Sbjct 1373 AACGTGGTCAAGCTCTTGGGCTGTTGTCTAGAGACTGAAGTTCCCTTGTTGGTCTATGAG 1432
Query 1501 TTCATTAACAGTGGTACCCTTTTCGATCACTTGCACGGTTCCTTGTATGATTCTTCACTT 1560
||||| | || ||| ||||||||||||||||||||||||||| ||| ||||||||| |||
Sbjct 1433 TTCATCACCAATGGCACCCTTTTCGATCACTTGCACGGTTCCATGTTTGATTCTTCGCTT 1492
Query 1561 ACATGGGAGCACCGTCTGAGGATAGCAACAGAAGTAGCAGGAAGTCTTGCATATCTTCAC 1620
|||||||| ||||||||||||||||||| |||| | || |||| ||||||||||||||||
Sbjct 1493 ACATGGGAACACCGTCTGAGGATAGCAATAGAAATCGCTGGAACTCTTGCATATCTTCAC 1552
Query 1621 TCTTCTGCTTCTATTCCAATCATCCACCGAGATATCAAGACTGCTAATATTCTCCTGGAT 1680
|| |||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 1553 TCCTCTGCTTCCATTCCAATCATCCACAGAGATATCAAGACTGCTAATATTCTCCTAGAT 1612
Query 1681 AAAAACTTAACTGCAAAAGTAGCTGACTTTGGTGCATCAAGATTGATACCGATGGATAAA 1740
|||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 1613 GAAAACTTAACTGCAAAAGTAGCCGACTTTGGTGCTTCAAGGCTGATACCGATGGATAAA 1672
Query 1741 GAGCAGCTCACAACAATAGTGCAAGGCACTCTAGGTTACCTAGACCCAGAATATTACAAC 1800
||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||||||
Sbjct 1673 GAGCAGCTCACAACAATGGTGCAAGGCACTCTAGGTTACTTAGACCCAGAGTACTACAAC 1732
Query 1801 ACAGGG-TTGTTAAACGAAAAGAGCGATGTTTATAGTTTTGGGGTCGTCCTAATGGAACT 1859
|||||| || | || |||||||||||||||||| || || ||||| ||||||||||||||
Sbjct 1733 ACAGGGCTTCTGAA-CGAAAAGAGCGATGTTTACAGCTTCGGGGTAGTCCTAATGGAACT 1791
Query 1860 GCTCTCAGGTCAAAAGGCATTGTGTTTCGAAAGACCACATTGCCCAAAAAATCTTGTGAG 1919
|||||||||||||||||||||||| |||||||||||||| ||| ||||| |||| |||||
Sbjct 1792 GCTCTCAGGTCAAAAGGCATTGTGCTTCGAAAGACCACAATGCTCAAAACATCTGGTGAG 1851
Query 1920 TTGTTTTGCTTCTGCCACAAA-GAATAATAGGTTCCATGAAATTATTGATGGGCAAGTGA 1978
|| ||||||||||||||||| || ||||||||||||||| |||||||||||||||||||
Sbjct 1852 CTGCTTTGCTTCTGCCACAAAAGA-TAATAGGTTCCATGAGATTATTGATGGGCAAGTGA 1910
Query 1979 TGAATGAGGATAACCAGAGAGAGATCCAGGAAGCTGCAAGAATTGCTGCAGA-GTGTACA 2037
|||| |||||||| ||||| |||||||||||||||||||||||||| | | |||||||
Sbjct 1911 TGAACGAGGATAATCAGAGGGAGATCCAGGAAGCTGCAAGAATTGCAA-ATAAGTGTACA 1969
Query 2038 AGGCTAATGGGAGAGGAAAGGCCAAGGATGAAAGAAGTAGCTGCAGAGTTAGAGGCCTTG 2097
|| | | |||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1970 AGATTGACGGGAGAAGAAAGGCCAAGGATGAAAGAAGTAGCTGCAGAGTTGGAGGCCTTG 2029
Query 2098 AGAGTTAAAACAACTAAATATAAGTGGTCGGATCAGTATCGTGAGACAGGGGAGATTGAA 2157
| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 2030 AAAGTCAAAACAACTAAACATAAGTGGTCGGATCAGTATCCTGAGACAGGGGAGATTGAA 2089
Query 2158 CACTTGCTCGGCGTTCAAATCTTGTCAGCACAAGGCGAA-ACCAGTAGCAGCATTGGCTA 2216
|||||||||| ||||||||||| ||| |||||||| || ||||||||| | | || ||
Sbjct 2090 AACTTGCTCGGTGTTCAAATCTTATCAACACAAGGC-AATACCAGTAGCCG--T-GGTTA 2145
Query 2217 TGACAGCATCA-GAAATGTAACAACATTGGACATTGAAGCTGGCCGTTGATATTAATGCT 2275
||||||||||| ||| |||| ||| || |||||||||||||||||| |||||||||||||
Sbjct 2146 TGACAGCATCAAGAA-TGTAGCAATATCGGACATTGAAGCTGGCCGCTGATATTAATGCT 2204
Query 2276 CT-GACAAAATCACATGTATATCTTTTGTTTGTaaaaaaaGAAAGTCATTTCCTTGTTGC 2334
|| |||||| ||||||| || |||||| ||| || ||| |||| || ||| ||||||
Sbjct 2205 CTTGACAAATTCACATGCATCTCTTTTCTTTATATTAAATGAAAACCACTTCTTTGTTG- 2263
Query 2335 TTC-ATCAATAATGCTTTGACAGATTTGTTTGTACATCATCAATAATCATGTTCATATTT 2393
| | |||||||||||||||| ||| || ||||||| |||||||||||||||||||||||
Sbjct 2264 TACCATCAATAATGCTTTGAGAGAATT-TTTGTAC--CATCAATAATCATGTTCATATTT 2320
Query 2394 TCCTTTACTTGGTATACTAACCAGTAACCGATCTGGTTATTGGCAAATTTAAAACTCTTG 2453
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2321 CCCTTTACTTGTTATGCTAACCAGTAACCGATCTGGTTATTGGCAAATTTAAAACTATTG 2380
Query 2454 TGTTAAATTTTAGTTC 2469
|| |||||| |||||
Sbjct 2381 TGCAAAATTTCAGTTC 2396
> Ahg921093 jgi|Araly1|921093|scaffold_102374.1
Length=2248
Score = 1628 bits (881), Expect = 0.0
Identities = 1844/2292 (80%), Gaps = 133/2292 (6%)
Strand=Plus/Plus
Query 48 agagaaagaaagagagaagaTGAAGGTACAGGAGGGTTTGTTCGTGGTGGC---TGTTTT 104
|||| || |||| |||||||||||||| | | || |||| ||||||| | ||||
Sbjct 4 AGAG-AA-AAAGGGAGAAGATGAAGGTGC-CTA--GTCTGTTTTTGGTGGCTATTTTTTT 58
Query 105 CTACCTTGCTTATACGCAGCTAGTCAA-GGG-----GCAACCTCGCAAGGAGTGCCAAAC 158
||||||||| ||||||||||| ||||| ||| ||||||||| | || |||||| |
Sbjct 59 CTACCTTGCATATACGCAGCTGGTCAATGGGCAACCTCAACCTCGCCACGATTGCCAATC 118
Query 159 TAGATGTGGCAATGTCGCAGTTGAGTACCCTTTTGGTACTTCTCCAGGTTGTTACTATCC 218
||||||||| || ||| || |||| ||||||||||||| ||| ||||||||||||| ||
Sbjct 119 TAGATGTGGTAACGTCACAATTGATTACCCTTTTGGTATTTCGACAGGTTGTTACTACCC 178
Query 219 CGGAGATGAAAGTTTCAATCTTACTTGCAACG-A-GCAAGA-GAAGCTCTTCTTTGGCAA 275
||||||||| ||||||||| | || || | | | | || | || | || || |||||
Sbjct 179 CGGAGATGATAGTTTCAATATCACCTGTGAGGAAGGTAA-ACCAA-ATGTT-TTAGGCAA 235
Query 276 CA-TGCCAGTCATCAACATGT-CTCT-CAGCGGCCAGCTTCGTGTTCGGCTAGTTAGATC 332
|| || ||| || ||| | | | | ||||||||| || || | || ||| | ||||
Sbjct 236 CATTG-AAGTGATAAAC-TTTAAT-TACAGCGGCCAACTGCGCGGTCTGCTTCCTCGATC 292
Query 333 CAGAGTTTGCTACGA-TAGTCAAGGAAAACAGACTGACTAC-ATTGCCCAGC-GGACCAC 389
|| ||||||||||| || ||| | ||| ||||| | | | | ||| | || |
Sbjct 293 CACTGTTTGCTACGACCAG-CAA--ACAAC-TACTGAATTCGAGT-CCC-TCTGG-TTTC 345
Query 390 -CCTGGGTAA-TT-TCACTCTCTCTGAACTTAAC-AGATTTACTGTAGTAGGTTGTAACA 445
||| ||| || || |||| | ||| ||| || |||||| ||||||| ||||||
Sbjct 346 GGTTGGATAATTTATCTTTCTCCCCCAAC--AACAAG-TTTACTTTAGTAGGCTGTAAC- 401
Query 446 G-TTACGCATTTCTCCGCACATCTGGAGTTGAAAAATACTCAACTGGATGCATATCAATA 504
| || ||| |||| | || | |||| | |||| ||||||||||||||||| ||| ||
Sbjct 402 GCTTGGGCACTTCTGAGTACTTTTGGAATACAAAACTACTCAACTGGATGCATGTCATTA 461
Query 505 TGTGATTCTGCCACAACG--AAAAACGGATCATGTTCTGGTGAAGGTTGCTGC----CAG 558
|| |||||| || | || ||| | | | |||| ||||| ||||||||| |||
Sbjct 462 TGCGATTCTCCCCCGCCGCCAAATA-GTA-AATGTAATGGTGTTGGTTGCTGCAGAACAG 519
Query 559 A--TCCCTGTCCCTAG-AGGATACTCTTTTGTCAGAGTAAAAC-C-A-CA--TAGCTTTC 610
| || || |||| | ||||| | | | | | | |||| | | || | || |||
Sbjct 520 AGGTCTCTATCCC--GTTGGATA-GCCATAG--A-ATTGAAACTCAACCAGCTCGC-TTC 572
Query 611 -ACAACCAT-CCTACTGTGCATCTGTTTAATCCTTGCACCTACGCCTTTCTCGTTGAAGA 668
| || ||| || | ||| | | ||||||||||||| |||||| ||| ||||||||||
Sbjct 573 GA-AAACATGACTTCCGTGAAGCACTTTAATCCTTGCAGCTACGCTTTTTTCGTTGAAGA 631
Query 669 TGGTATGTTTGACTTCCA-TGCTTTGGAAGATCTCAACAATCTGCGAAATGTTACTACGT 727
||||||||| |||| || | ||| |||||||| || |||||||||||||| || | ||
Sbjct 632 CGGTATGTTTAACTT-CAGTTCTTCAGAAGATCTTAAGAATCTGCGAAATGTCACAAGGT 690
Query 728 TCCCTGTAG-TACTAGATTGGTCTATCGGAGACAAGAC-T-TGCAAACAAGTAGAATACA 784
||||||| | |||||||||||||||| ||| || |||| | || | | |||| | ||
Sbjct 691 TCCCTGT-GTTACTAGATTGGTCTATTGGAAACGAGACATGTG-AGA-AAGTTTTAGGCA 747
Query 785 GGGGCGTGTGTGGTGGTAACAGCACATGTTTCGATTCTACTGGTGGAACCGGG-TATAAC 843
| | | |||||||| |||||||||||||| ||||||| | |||||| ||| ||||||
Sbjct 748 GAAACATATGTGGTGGGAACAGCACATGTTTTGATTCTAGTCGTGGAA-AGGGTTATAAC 806
Query 844 TGCAAATGTTTAGAAGGTTTTGAGGGGAATCCATACCTTCCAAACGGTTGTCAAGACATC 903
|||||||||||||| |||||||| |||||||| |||||| || |||| || |||||||||
Sbjct 807 TGCAAATGTTTAGATGGTTTTGATGGGAATCCTTACCTTTCAGACGGCTGCCAAGACATC 866
Query 904 AATGAATGTATTAGTAGTAGACATAACTGTTCGGAGCA-TAGTACCTGTGAAAACACGAA 962
||||| |||| || | |||||||||| |||||||| | ||| |||||||||||||||
Sbjct 867 AATGAGTGTACTACTCGTAGACATAATTGTTCGGA-TACTAGCACCTGTGAAAACACGCT 925
Query 963 GGGGAGCTTCAACTGTAACTGCCCATCTGGTTACCG-C-AAAGATTCC-CTTA--AT-AG 1016
|| |||||| | ||||| |||||||||||||| | | || || || | || || ||
Sbjct 926 TGGAAGCTTCCATTGTAAGTGCCCATCTGGTTA-TGACTTAA-ATACCAC-TACTATGAG 982
Query 1017 CT---GT---ACTCGTAAAGTCAG-GCCTGAA-TACTTTA-GATGGACTCAAAT-TT-TT 1065
|| || || | ||||| || |||| || ||| ||| |||||||| | | || ||
Sbjct 983 CTGCAGTGACACACCTAAAG-AAGAGCCT-AAGTAC-TTAGGATGGACT--ACTGTTCTT 1037
Query 1066 CTTGGAACCACCATCGGCTTCTCGGTTATCATGCTTGGGATTAGCTGTCTACAACAGAAA 1125
|||||||||||||| ||||||| | | ||| ||||| ||||||| | |||||||||||
Sbjct 1038 CTTGGAACCACCATTGGCTTCTTGATCATCCTGCTTATCATTAGCTATATACAACAGAAA 1097
Query 1126 ATTAAGCACCGGAAGAACACAGAGCTCCGACAAAAATTCTTCGAGCAAAATGGTGGAGGC 1185
|| ||||||||||| ||||| ||||| |||||| |||||||||||||||||||||| |||
Sbjct 1098 ATGAAGCACCGGAAAAACACCGAGCTGCGACAACAATTCTTCGAGCAAAATGGTGGCGGC 1157
Query 1186 ATGTTGATACAGCGAGTCTCGGGAGCAGGGCCATCAAATGTTGATGTCAAAATCTTCACT 1245
||||||||||||||| | || |||||||||||||||||| |||||||||||||||| |||
Sbjct 1158 ATGTTGATACAGCGACTTTCAGGAGCAGGGCCATCAAATATTGATGTCAAAATCTTTACT 1217
Query 1246 GAGAAAGGAATGAAGGAAGCAACTAATGGTTACCATGAGAGCAGAATCCTGGGTCAGGGA 1305
||| |||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 1218 GAGGAAGGCATGAAGGAAGCAACTAATGGTTATGATGAGAGCAGAATCCTGGGGCAGGGA 1277
Query 1306 GGCCAAGGAACAGTGTACAAAGGGATATTGCCGGACAACTCCATAGTTGCTATAAAGAAA 1365
|||||||||||||| |||||||||||| |||| |||||||||| ||||||||||||||||
Sbjct 1278 GGCCAAGGAACAGTCTACAAAGGGATACTGCCAGACAACTCCACAGTTGCTATAAAGAAA 1337
Query 1366 GCTCGGCTTGGAAACCGTAGCCAAGTAGAGCAGTTCATCAACGAAGTGCTAGTGCTTTCA 1425
|||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1338 GCTCGGCTTGGAGACCGTAGCCAAGTAGAGCAGTTCATCAACGAAGTTCTTGTGCTTTCA 1397
Query 1426 CAAATCAACCATAGGAACGTGGTCAAGGTCTTGGGGTGTTGTTTAGAGACAGAAGTCCCC 1485
|||||||||||||||||||||||||| ||||||| || ||| ||||||| ||||| |||
Sbjct 1398 CAAATCAACCATAGGAACGTGGTCAAACTCTTGGGCTGCTGTCTAGAGACTGAAGTTCCC 1457
Query 1486 TTGTTGGTCTATGAGTTCATTAACAGTGGTACCCTTTTCGATCACTTGCACGGTTCCT-T 1544
||||||||||||||||||||| |||||| || ||||||||||||||||||||||| | |
Sbjct 1458 TTGTTGGTCTATGAGTTCATTTCCAGTGGCACTCTTTTCGATCACTTGCACGGTTC-TAT 1516
Query 1545 GTATGATTCTTCACTTACATGGGAGCACCGTCTGAGGATAGCAACAGAAGTAGCAGGAAG 1604
|| ||||||||| ||||||||||| ||||||||||||||||| | |||| | || ||||
Sbjct 1517 GTTTGATTCTTCGCTTACATGGGAACACCGTCTGAGGATAGCGATAGAAATCGCTGGAAC 1576
Query 1605 TCTTGCATATCTTCACTCTTCTGCTTCTATTCCAATCATCCACCGAGATATCAAGACTGC 1664
||| || ||||||||||| |||||||||||||| |||||||| || ||| ||||||| ||
Sbjct 1577 TCTAGCGTATCTTCACTCCTCTGCTTCTATTCCGATCATCCATCGGGATGTCAAGACCGC 1636
Query 1665 TAATATTCTCCTGGATAAAAACTTAACTGCAAAAGTAGCTGACTTTGGTGCATCAAGATT 1724
|||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1637 TAATATTCTCTTGGATGAAAACTTAACTGCAAAAGTAGCTGACTTTGGTGCTTCAAGGCT 1696
Query 1725 GATACCGATGGATAAAGAGCAGCTCACAACAATAGTGCAAGGCACTCTAGGTTACCTAGA 1784
|||||||||||| |||||||||||||||||| |||||||| ||||| || || ||||
Sbjct 1697 GATACCGATGGACCAAGAGCAGCTCACAACAACGGTGCAAGGAACTCTTGGCTATTTAGA 1756
Query 1785 CCCAGAATATTACAACACAGGG-TTGTTAAACGAAAAGAGCGATGTTTATAGTTTTGGGG 1843
||||||||| |||||||||||| || | || ||||||||||||||||||||| |||||||
Sbjct 1757 CCCAGAATACTACAACACAGGGCTTCTGAA-CGAAAAGAGCGATGTTTATAGCTTTGGGG 1815
Query 1844 TCGTCCTAATGGAACTGCTCTCAGGTCAAAAGGCATTGTG-TTTCGAAAGACCACATTGC 1902
| |||| |||||||||||||||||| ||||||| ||||| ||| ||| | ||||| |
Sbjct 1816 TAATCCTCATGGAACTGCTCTCAGGTGAAAAGGCTTTGTGCTTT-GAACGGCCACAGA-C 1873
Query 1903 C-CAAAAAATCTTGTGAGTTGTTTTGCTTCTGCCAC-AAAGAATAATAGGTTCCATGAAA 1960
| ||||| |||| ||||||| |||| ||| |||| ||||| |||||||| ||||| |
Sbjct 1874 CTCAAAACATCTAGTGAGTTACTTTGTTTCCGCCATGAAAGAG-AATAGGTTGCATGAGA 1932
Query 1961 TTATTGATGGGCAAGTGATGAATGAGGATAACCAGAGAGAGATCC-AGGAAGCTGCAAGA 2019
||||||| || ||||| ||||| ||| |||| ||||| ||||||| || || ||||||||
Sbjct 1933 TTATTGACGGTCAAGTTATGAACGAGTATAATCAGAGGGAGATCCGAG-AATCTGCAAGA 1991
Query 2020 ATTGCTGCA-GAGTGTACAAGGCTAATGGGAGAGGAAAGGCCAAGGATGAAAGAAGTAGC 2078
||||| || ||||| ||||| | | ||||||||||||||||| ||||||||||||||
Sbjct 1992 ATTGC-GCTTGAGTGCACAAGAATTACAGGAGAGGAAAGGCCAAGTATGAAAGAAGTAGC 2050
Query 2079 TGCAGAGTTAGAGGCCTTGAGAGTTAAAACAACTAAATATAAGTGGTCGGATCAGTATCG 2138
|||| || |||| ||||||||||| |||||||| ||| |||||||||| ||||| ||||
Sbjct 2051 TGCAAAGCTAGAAGCCTTGAGAGTCAAAACAACCAAACATAAGTGGTCAGATCAATATCC 2110
Query 2139 TGAGACAGGGGAGATTGAACACTTGCTCGGCGTTCAAATCTTGTCAGCACAAGGCGAAAC 2198
| | || | | |||| || ||| | || ||||||||||| || || ||||| || ||
Sbjct 2111 C-A-A--GGAG-G-TTGAGCATTTGGTTGGTGTTCAAATCTTATCGGCGCAAGGTGATAC 2164
Query 2199 CAGTAGCAGCATTGGCTATGACAGCATCA-GAAATGTAACAACATTGGACATTGAAGCTG 2257
|||||||| |||||||||||||||||| ||| |||| ||| ||||||||||||| |||
Sbjct 2165 CAGTAGCA---TTGGCTATGACAGCATCAAGAA-TGTAGCAATATTGGACATTGAAACTG 2220
Query 2258 GCCGTTGATATT 2269
|||| |||||||
Sbjct 2221 GCCGCTGATATT 2232
> Ahg921094 jgi|Araly1|921094|scaffold_102375.1
Length=1770
Score = 806 bits (436), Expect = 0.0
Identities = 824/1009 (82%), Gaps = 35/1009 (3%)
Strand=Plus/Plus
Query 634 TTTAATCCTTGCACCTACGCCTTTCTCGTTGAAGATGGTATGTTTGACTTC-CATGCTTT 692
||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct 627 TTTAATCCTTGCACCTACGCCTTTCTCGTCGAAGATGGTAAGTTTGACTTCTC-TGCTAC 685
Query 693 GGAAGATCTCAACAATCTGCGAAATGTTAC-TACGTTCCCTGTAGTACTAGATTGGTCTA 751
||||||||| | ||||||| ||||| || | |||||||| | ||| ||||||||||
Sbjct 686 GGAAGATCTTAGGGATCTGCGGAATGTCACGGA-TTTCCCTGTGGCACTGGATTGGTCTA 744
Query 752 TCGGAGACAAGACTTGCAAACAAG-TAGAATACAGGGGCGTGTGTGGTGGTAACAGCACA 810
| ||| || |||| ||| | |||| | ||| || || | |||||||| |||||||||
Sbjct 745 TTGGAAACCAGACATGCGAGCAAGCTGGAA-GCACAAGCATATGTGGTGGGAACAGCACA 803
Query 811 TGTTTCGATTCTACTGGT-GGAACCGGGTATAACTGCAAATGTTTAGAAGGTTTTGAGGG 869
||||| ||||||||| | || |||| ||| |||||||||| || |||| | ||
Sbjct 804 TGTTTTGATTCTACTACTAGG-CCCGGATATGTCTGCAAATGTAAAGGCGGTTACCATGG 862
Query 870 GAATCCATACCTTCCAAACGGTTGTCAAGACATCAATGAATGTATTAGTAG-TAGACATA 928
||| || |||| |||| ||||||| ||||||||| |||| ||||||| | | || |||||
Sbjct 863 GAACCCCTACCATCCAGACGGTTGCCAAGACATCGATGAGTGTATTA-TTGATACACATA 921
Query 929 ACTGTTCGGAGCATAGTACCTGTGAAAACA-CGAAGGGGAGCTTCAACTGTAACTGCCCA 987
|||||||||| | | |||||| |||||| || || | ||||| | ||||| ||||||
Sbjct 922 ACTGTTCGGATCCCAAAACCTGTAAAAACAGGGATGGAG-GCTTCGATTGTAAGTGCCCA 980
Query 988 TCTGGTTACCGCAAAGATT-CC-CTTAATA-GCTGTACTCGTAAAGT---C-AGGCCTGA 1040
||||||||| | | ||| || | | ||| || ||| | |||| | ||||| ||
Sbjct 981 TCTGGTTACAACTTA-ATTACCAC-T-ATACACTCCACT-ATGAAGTGCACGAGGCCCGA 1036
Query 1041 ATACTTTAGATGGACTCAAATTTTTCTTGGAACCACCATCGGCTTCTCGGTTATCATGCT 1100
|||| ||||| ||||||||| |||||||| ||||||||||||||||| ||| || ||||
Sbjct 1037 ATACATTAGACGGACTCAAAGTTTTCTTGTAACCACCATCGGCTTCTTGGTCCTCCTGCT 1096
Query 1101 TGG-GATTAGCTGT-CTACAACA-GAAAATTAAGCACCGGAA-GA-ACACAGAGCTCCGA 1155
||| | ||| | || | |||||| | || ||||||||||| || | || ||||||||
Sbjct 1097 TGGCG-TTATCAGTAC-ACAACACG-CAACAAAGCACCGGAAGGATGC-CA-AGCTCCGA 1151
Query 1156 CAAAAATTCTTCGAGCAAAATGGTGGAGGCATGTTGATACAGCGAGTCTCGGGAGCAGGG 1215
| | ||||||| ||||||||||| || |||||||||||||||| | |||| ||| ||||
Sbjct 1152 CGACAATTCTTTGAGCAAAATGGCGGCGGCATGTTGATACAGCAAATCTCAAGAGTAGGG 1211
Query 1216 CCATCAAATGTTGATGTCAAAATCTTCACTGA-GAAAGGAATGAAGGAAGCAACTAATGG 1274
||||||| ||||| |||||||||| || || |||| | |||||||| |||||||||||
Sbjct 1212 TCATCAAACATTGATTTCAAAATCTTTACCGAGGAAA-GCATGAAGGAGGCAACTAATGG 1270
Query 1275 TTACCATGAGAGCAGAATCCTGGGTCAGGGAGGCCAAGGAACAGTGTACAAAGGGATATT 1334
||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 1271 TTATGATGAGAGCAGAATATTGGGTCAGGGAGGCCAAGGAACAGTCTACAAAGGGATATT 1330
Query 1335 GCCGGACAACTCCATAGTTGCTATAAAGAAAGCTCGGCTTGGAAACCGTAGCCAAGTAGA 1394
||| || || |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1331 GCCAGATAATTCCACAGTTGCTATAAAGAAAGCTCGGCTTGGAGACCGTAGCCAAGTAGA 1390
Query 1395 GCAGTTCATCAACGAAGTGCTAGTGCTTTCACAAATCAACCATAGGAACGTGGTCAAGGT 1454
|| ||| || | ||| || | |||||||||||||| ||||| ||||| ||||||||| |
Sbjct 1391 CCAATTCGTCCATGAAATGATCGTGCTTTCACAAATTAACCACAGGAATGTGGTCAAGCT 1450
Query 1455 CTTGGGGTGTTGTTTAGAGACAGAAGTCCCCTTGTTGGTCTATGAGTTCATTAACAGTGG 1514
|||||| || ||| ||||||| ||| ||||||||||||||||||| ||||||| ||||||
Sbjct 1451 CTTGGGTTGCTGTCTAGAGACTGAATTCCCCTTGTTGGTCTATGAATTCATTACCAGTGG 1510
Query 1515 TACCCTTTTCGATCACTTGCACGGTTCCTTGTATGATTCTTCACTTACATGGGAGCACCG 1574
||||||||||||||||||||||||||| ||| || |||||| ||||||||||| |||||
Sbjct 1511 CACCCTTTTCGATCACTTGCACGGTTCCATGTTTGCTTCTTCTCTTACATGGGAACACCG 1570
Query 1575 TCTGAGGATAGCAACAGAAGTAGCAGGAAGTCTTGCATATCTTCACTCT 1623
|| |||||||| | |||||| || |||| ||| |||||||||||||||
Sbjct 1571 CCTAAGGATAGCGATAGAAGTCGCTGGAACTCTAGCATATCTTCACTCT 1619
> Ahg911962 jgi|Araly1|911962|Al_scaffold_0001_2216
Length=1722
Score = 737 bits (399), Expect = 0.0
Identities = 509/562 (91%), Gaps = 8/562 (1%)
Strand=Plus/Plus
Query 1197 GCGAGTCTCGGGAGCAGGGCCATCAAATGTTGATGTCAAAATCTTCACTGAGAAAGGAAT 1256
|||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1005 GCGACTCTCAGGAGCAGGGCCATCAAATGTTGATGTCAAAATCTTCACTGAGGAAGGAAT 1064
Query 1257 GAAGGAAGCAACTAATGGTTACCATGAGAGCAGAATCCTGGGTCAGGGAGGCCAAGGAAC 1316
||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct 1065 GAAGGAAGCAACTAATGGTTATGACGAGAGCAGAATCCTGGGTCAAGGAGGCCAAGGAAC 1124
Query 1317 AGTGTACAAAGGGATATTGCCGGACAACTCCATAGTTGCTAT-AAAGAAAGCTCGGCTTG 1375
||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |
Sbjct 1125 AGTCTACAAAGGGATATTACCGGACAACTCCATAGTTGCTATCAAA-AAAGCTCGGCTCG 1183
Query 1376 GAAACCGTAGCCAAGTAGAGCAGTTCATCAACGAAGTGCTAGTGCTTTCACAAATCAACC 1435
|| || ||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1184 GAGACAATAGCCAAGTAGAGCAGTTCATCAACGAAGTGCTTGTGCTTTCACAAATTAACC 1243
Query 1436 ATAGGAACGTGGTCAAGGTCTTGGGGTGTTGTTTAGAGACAGAAGTCCCCTTGTTGGTCT 1495
||||||||||||||||| ||||||| || ||||||||||| ||||| |||||||||||||
Sbjct 1244 ATAGGAACGTGGTCAAGCTCTTGGGCTGCTGTTTAGAGACTGAAGTTCCCTTGTTGGTCT 1303
Query 1496 ATGAGTTCATTAAC-AGTGGTACCCTTTTCGATCACTTGCACGGTTCCT-TGTATGATTC 1553
||||||||||| | ||||| || |||| |||||||||||||||||| | ||| ||||||
Sbjct 1304 ATGAGTTCATTG-CTAGTGGCACTCTTTACGATCACTTGCACGGTTC-TATGTTTGATTC 1361
Query 1554 TTCACTTACATGGGAGCACCGTCTGAGGATAGCAACAGAAGTAGCAGGAAGTCTTGCATA 1613
||| ||||||||||| ||||||||||||||||| | |||| | || |||| |||||| ||
Sbjct 1362 TTCGCTTACATGGGAACACCGTCTGAGGATAGCCATAGAAATTGCTGGAACTCTTGCGTA 1421
Query 1614 TCTTCACTCTTCTGCTTCTATTCCAATCATCCACCGAGATATCAAGACTGCTAATATTCT 1673
||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 1422 TCTTCACTCATCTGCTTCTATTCCAATCATCCACCGCGATGTCAAGACTGCTAATATTCT 1481
Query 1674 CCTGGATAAAAACTTAACTGCAAAAGTAGCTGACTTTGGTGCATCAAGATTGATACCGAT 1733
||||||| |||||||||| || |||||||||||||||||||| ||||| ||||||| ||
Sbjct 1482 CCTGGATGAAAACTTAACGGCCAAAGTAGCTGACTTTGGTGCTTCAAGGCTGATACCCAT 1541
Query 1734 GGATAAAGA-GCAGCTCACAAC 1754
||||||||| | ||||| ||||
Sbjct 1542 GGATAAAGAAG-AGCTCGCAAC 1562
Score = 228 bits (123), Expect = 2e-58
Identities = 211/253 (83%), Gaps = 8/253 (3%)
Strand=Plus/Plus
Query 634 TTTAATCCTTGCACCTACGCCTTTCTCGTTGAAGATGGTATGTTTGACTTCCA-TGCTTT 692
||||||||||||| ||||||||||||||||||||||||||||||| ||||| | ||||||
Sbjct 580 TTTAATCCTTGCAGCTACGCCTTTCTCGTTGAAGATGGTATGTTTAACTTC-AGTGCTTT 638
Query 693 GGAAGATCTCAACAATCTGCGAAATGTTA--CTACGTTCCCTGTAGTACTAGATTGGTCT 750
|||||||| || |||||| | ||||| | | | ||||||||| |||||||||||||||
Sbjct 639 AGAAGATCTTAAGAATCTGAGGAATGTCAAGC-A-GTTCCCTGTGGTACTAGATTGGTCT 696
Query 751 ATCGGAGACAAGACTTGCAAACAAGTAGAATACAGGGGCGTGTGTGGTGGTAACAGCACA 810
|||||| || |||| || | ||||| | | ||| | |||||||| ||||||| |
Sbjct 697 ATCGGAAACCAGACATGTGAGCAAGTTGTAGGCAGAAATATATGTGGTGGGAACAGCAGA 756
Query 811 TGTTTCGATTCTACTGGTGGAACCGGGT-ATAACTGCAAATGTTTAGAAGGTTTTGAGGG 869
||||| |||||| | |||||| |||| ||||||||||||||||||| |||||||| ||
Sbjct 757 TGTTTTAATTCTAGTCGTGGAAA-GGGTTATAACTGCAAATGTTTAGATGGTTTTGATGG 815
Query 870 GAATCCATACCTT 882
|||||||||||||
Sbjct 816 GAATCCATACCTT 828
> Ahg472361 jgi|Araly1|472361|fgenesh2_kg.1__2315__AT1G21245.1
Length=500
Score = 372 bits (201), Expect = 8e-102
Identities = 414/513 (81%), Gaps = 29/513 (6%)
Strand=Plus/Plus
Query 1759 GTGCAAGGCACTCTAGGTTACCTAGACCCAGAATATTACAACACAGGG-TTGTTAAACGA 1817
||||||||||| || || || ||||||||||||| || | ||||||| || | |||||
Sbjct 4 GTGCAAGGCACCCTCGGCTATTTAGACCCAGAATACTATACCACAGGGCTT-CTGAACGA 62
Query 1818 AAAGAGCGATGTTTATAGTTTTGGGGTCGTCCTAATGGAACTGCTCTCAGGTCAAAAGGC 1877
||| || ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||
Sbjct 63 AAAAAGTGATGTTTATAGCTTTGGGGTAGTCCTCATGGAACTGCTATCAGGTCAAAAGGC 122
Query 1878 ATTGTG-TTTCGAAAGACCACATTGCCCAAAAAATCTT-GTGAGTTGTTTTGCTTCTGCC 1935
|||||| ||| ||| | ||| | ||||| || || ||||||| |||| || ||||
Sbjct 123 ATTGTGCTTT-GAACGGCCAGAGAATTCAAAACAT-TTGGTGAGTTACTTTGTTTTTGCC 180
Query 1936 AC-AAAGAATAATAGGTTCCATGAAATTATTGATGGGCAAGTGATGAATGAGGATAACCA 1994
|| |||| | |||||||| ||||| ||||||||||| |||||| |||| ||| | || ||
Sbjct 181 ACGAAAG-AGAATAGGTTACATGAGATTATTGATGGCCAAGTGTTGAACGAGAACAATCA 239
Query 1995 GA-GAGAGATCCAGGAAGCTGCAAGAATTGCTGCAGAGTGTACAAGGCTAATGGGAGAGG 2053
|| | || |||||||||||||||||| ||||| || |||||||| || |||||||| |
Sbjct 240 GAGGGGA-ATCCAGGAAGCTGCAAGAGTTGCTATTGAATGTACAAGACTGATGGGAGAAG 298
Query 2054 AAAGGCCAAGGATGAAAGAAGTAGCTGCAGAGTTAGAGGCCTTGAGAGTTAAAACAACTA 2113
||||||||||||||||||||||||||| |||| |||| | ||||| || |||||||| |
Sbjct 299 AAAGGCCAAGGATGAAAGAAGTAGCTGTAGAGCTAGAAACTTTGAGCGTCAAAACAACCA 358
Query 2114 AATATAAGTGGTCGGATCAGTATCGTGAGACAGGGGAGATTGAACACTTGCTCGGC-GTT 2172
|| ||||||||||||||||||||| ||| || || || ||||||||||| || ||
Sbjct 359 AACATAAGTGGTCGGATCAGTATCC--AGA--GGAGA-AT-GAACACTTGCTTGGTAGT- 411
Query 2173 CAA-ATCTTGTCAGCACAAGGCGAAACCAGTAGCAGCATTGGCTATGACAGCATCA-GAA 2230
|| ||| |||| ||||||||||| |||| |||| | | || ||||||| ||||| |||
Sbjct 412 -AACATCGTGTCTGCACAAGGCGATACCATTAGCCG--T-GGTTATGACAACATCAAGAA 467
Query 2231 ATGTAACAA--CATTGGACATTGAAGCTGGCCG 2261
| || || | ||| ||||||||||||||||
Sbjct 468 TT-TAGCATTGC-TTG-ACATTGAAGCTGGCCG 497
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93054468535
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5