BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G21580.1
Length=7209
Score E
Sequences producing significant alignments: (Bits) Value
Ahg313049 jgi|Araly1|313049|fgenesh1_pm.C_scaffold_1001829 4844 0.0
Ahg909351 jgi|Araly1|909351|Al_scaffold_0002_2432 549 1e-154
Ahg481034 jgi|Araly1|481034|fgenesh2_kg.4__94__AT2G21660.2 139 3e-31
> Ahg313049 jgi|Araly1|313049|fgenesh1_pm.C_scaffold_1001829
Length=6399
Score = 4844 bits (2623), Expect = 0.0
Identities = 2968/3131 (95%), Gaps = 37/3131 (1%)
Strand=Plus/Plus
Query 2320 TGCCTCTCTGGACATTGCTAATGTTTCATTGGATCTTGCTAATTCAAATAATAGTGCGTC 2379
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct 2163 TGCCTCTCTGGACATTGCTAATGTTTCATCGGATCTTGCTAATGCAAATAATAGTGCCTC 2222
Query 2380 AGGGGATCTTGCTAATGCTAACAGTTTTACCGTTGGGACATATATGAATCCTATGGTCAC 2439
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 2223 AGGGGATCTTGCTAATGCTAACAGTTTTACCGTTGGGACATATATTAATACTATGGTCAC 2282
Query 2440 GTCACCTGATAAGAGTGTAGTTTTCCAGATGGAAAGTAAAAATCTTCCTCACTGCAAAAA 2499
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2283 GTCACCTGGTAAGAGTGTAGTTTTCCAGATGGAAAGTAAAAATCTTCCTCACTGCAAAAA 2342
Query 2500 CACAGTCAATGCACCGGTTGAGAATGTTAGCGGAAAAGGATACATGGAAACTACGCCTCT 2559
||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2343 CACAGTCAATGCAGCTGTTGAGAATGTTAGCGGAAAAGAATACATGGAAACTACGCCTCT 2402
Query 2560 TAATGTTGCTGCAGAAACGGCTGACAATATGGACAGTGAAGAAGGTAAACAGACTTGTGT 2619
||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| |||
Sbjct 2403 TAATGTTGCTGCAGAAATGGCTGACAATATGGATAGTGATGAAGGTAAACAGACTTTTGT 2462
Query 2620 AAACGACACTTCTTCATCTCTGACAAAGGTTGGAGTAAAGGGATCATCAAATGTGCTGTC 2679
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2463 AAACGACACTTCTTCATCTCTAACAAAGGTTGGAGTAAAGGGATCATCAAATGTGCTGTC 2522
Query 2680 TGTGGAGAGGACTGGTGGCTGTTCGCATAGTGATGAATCTGATTTAGCTATGGCAGTGCC 2739
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2523 TGTGGAGAGGACTGATGGCTGTTCGCACAGTGATGAATCTGATTTAGCTATGGCAGTACC 2582
Query 2740 ATCTGAGGGGTGTATGGAAAATGTAAGCACCGAGAGACTTGTCCCTGATGAGGAGCTGAT 2799
|||||||| ||||||||||||||||||| |||||||||||||||||||| ||| | |
Sbjct 2583 ATCTGAGGTGTGTATGGAAAATGTAAGCGCCGAGAGACTTGTCCCTGAT---GAG--G-T 2636
Query 2800 TTTGAAATCTTATCATCCTGCAGAAATTCC-T-TGT-G-T-AG-ATAGTGGTTCTGATAG 2853
|||||||||||||||||||||||||||||| | ||| | | || ||||||||||||| |
Sbjct 2637 TTTGAAATCTTATCATCCTGCAGAAATTCCTTCTGTAGATCAGTTTAGTGGTTCTGATCG 2696
Query 2854 TAGAGGTTTGAAAACTTGTTTATTGGAGCCAAATGTTTCTCTTAGCAAAGATCTTACTGA 2913
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2697 TAGAGGTTTGAAAGCTTATTTATTGGAGCCAAATGTTTCTCTTAGCAAAGATCTTACTGA 2756
Query 2914 TTGTGCGAGAGAGAGTCTTGTTGAGCAAGATGTTAGCCAAAGATCTGCCATATTTTGTGA 2973
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 2757 TTGTGCGAGAGAGAGTCTTGTTGAGCGAGATGTTAGCCAAAGATCTGCCACATTTTGTGA 2816
Query 2974 TAAATTACCTAGCTTGTCTGCGTTCGTAACTGAAACAACTCTTGCAATTGGAATTAATGG 3033
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 2817 TAAATTACCTAGCTTGTCTGCGCTCGTAACTGAAACAAATCTTGCAATTGGAATTAATGG 2876
Query 3034 CATGTCTGGTAATGAAACAGTTACTGATACTGAATCTGGTCTCCACGAAATTCAACCATG 3093
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 2877 CATGTCTGGTAATGAAACGGTTACTGATACTGTATCTGGTCTCCACGAAATTCAACCATG 2936
Query 3094 TACAACAGTATGTAAGTTGTCTCCTGAAGATCGTTTTGGATATGGATCATCTGGTGCCAT 3153
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2937 TAAAACAGTATGCAAGTTGTCTCCTGAAGATCGTTTTGGATATGGATCATCTGGTGTCAT 2996
Query 3154 TGGTTCTGTCCGGAGTCTCTCTATAGATAAAAATCTTGAAAAGGATTCTTCAAAGGTCAG 3213
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 2997 TGGTTCTGTCCGGAGTCTCTTTATAGATAAAAATCTTGAAAAGGATCCTTCAAAGGTCAG 3056
Query 3214 TTCTTGCTTAGTATCTGATAATTCTGTTAGTCCTTGTCATATTTCGCCATTGGTGGCAGT 3273
|||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||
Sbjct 3057 TTCTTGCTTAGTATCTGATAGTTCTGTTGGTCCTTGTCATATTTCTCCCTTGGTGGCAGT 3116
Query 3274 GAATGAGGAGATACAAAACAAAATATCTGTTAAAGCTAACTACAGTAATTCTCAAGATGG 3333
|||||||||||||||||||||||||| | | ||||||||| ||||||||||||||||||
Sbjct 3117 GAATGAGGAGATACAAAACAAAATATGTATCCAAGCTAACTGCAGTAATTCTCAAGATGG 3176
Query 3334 CATCAAGCATAAGGAAGATAATTGTACTGAAAGCGTTGAGGTAGAAACTCATGAAGAGAA 3393
||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 3177 CATCAAGCATACGGAAAATAATTGTACTGAAAGCGTTGAGGTAGATACTCAAGAAGAGAA 3236
Query 3394 AGCAAAGCTTCCTGGAGGAACTTCTAAGTAC-AGAACTCCGGTAACTAATATTACTGCTG 3452
||||||||||||||||||||||||||||| | ||||||| || ||||||||||| |||||
Sbjct 3237 AGCAAAGCTTCCTGGAGGAACTTCTAAGT-CAAGAACTCGGGGAACTAATATTATTGCTG 3295
Query 3453 GTAGTgggggggACTCTCTGTTTTTATGTGATTCTTTATCCAGCTCACGAA---GG---- 3505
||||| ||||||||| |||| |||||||||||||||||||||||| ||| ||
Sbjct 3296 GTAGT---GGGGACTCTGTGTTATTATGTGATTCTTTATCCAGCTCAGGAAGGCGGAACT 3352
Query 3506 -C-GG-A--TACGGAGTGAAGTTCATGTTTCGGCTGTGGTTGATGAAACTAGCAAAGGTG 3560
| || | |||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct 3353 TCAGGCAGCTACGGAGTGAAGTTCATGTTGCTGCTATGGTTGATGAAACTAGCAAAGGTG 3412
Query 3561 AAGAGAAATCCAAGCCTTCTGGTGGTATTGTTGCTGTTAGGAGGGATTCAGTGTTTCCAT 3620
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3413 AAGAGAAATCCAAGCCTTCTGGTGGTATTGTTGCTGTTAGGAAAGATTCAGTGTTTCCAT 3472
Query 3621 GTGATTCTCTATCCAGCTCGCCTAGGCTGTCCAGACCGTTACGGAGTGAAATTCATGTTG 3680
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||
Sbjct 3473 GTGATTCTCTATCCAGCTCGCCAAGGCTGTACAGACCGTTACGGAGTGAAATTCACGTTG 3532
Query 3681 CTTCTATGGTTGATGAAACTAGCAAATCTATAGAGAAAATAGAGTCTTCTGGTGGAACTT 3740
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 3533 CTTCTATGGTTGATGAAACTAGCAAATCTAAAGAGAAAACAGAGTCTTCTGGTGGAACTT 3592
Query 3741 CTGAGCACAGAACTCCGGAAACTGATATTGTTGCTGGTAGTAGGGATTCAGTGTTTCCAT 3800
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3593 CTAAGCACAGAACTCCGGAAACTGATATTGTTGCTGGTAGTGGGGATTCAGTGTTTCCAT 3652
Query 3801 GTAATTCTTTATCAAACTCACAAAGGCTGAGCTTCAGGCAGTTACGGAGTGAAATTCATG 3860
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3653 GTAATTCTTTATCAAGCTCACCAAGGCTGAGCTTCAGGCAGTTACGGAGTGAAATTCATG 3712
Query 3861 TTGCTAATATGGTTGATGAAACCAACAGAGTTAAAGAGAGTCAAAATGGAGATAGTCTTT 3920
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3713 TTGCTGCTATGGTTGATGAAACCAACAGAGTTAAAGTGAGTCAAAATGGAGATAGTCTTT 3772
Query 3921 TAGATACTTTACAAGAGCAAATTATGACCTCCCATGAGTTAACCCAGCCAG---GTTCTT 3977
||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||
Sbjct 3773 TAGATACTTTACAAGAGCAAATTATGAGCTCCCATGAGTTAACCCAGCCAGATAGCTCTT 3832
Query 3978 CGGCGCATTGTGATTTAGTTATGAAGCCAATGGGTGATCCAATAGCGAAACTGACTGATA 4037
|||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct 3833 TGGCGCATTGTGATTTAGTTATGAAGCCAATTGGTGATCCAATCGTGAAACTGACTGATA 3892
Query 4038 TAACTTCTGATGTGGGCTCTCAAGAAAAAGACTTACGGAACATTGCTAAGACTGATACAT 4097
||||||||||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct 3893 TAACTTCTGATGTGGGCTCTCAAGAAAAAGACTTACGCAATAGTGCTAAGACTGATATAT 3952
Query 4098 TTGATGGCGAAGCAGTGTCATCTGATGGACAAGTTTCTGGAACTGAAATTCCTGGTGGTT 4157
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 3953 TTGATGGCGAAGCATTGTCATCTGATGGAAAAGTTTCTGGAACTGAAATTCCTGGTGATT 4012
Query 4158 CAGGTGTTCGTGTGTCCAGATCATACTCACATGCAGATGTTAAATTTGCTTTGACCCATG 4217
||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 4013 CAGGTGTTCTTGTGTCCAGATCATACTCACATGCAGATGTTAAATTTGCATCGACCCATG 4072
Query 4218 TTAAAGAGCATGTAGTCTCTGTACCACACCGGGATCCCCAAAGTAAGACATCTATGAATT 4277
||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 4073 TTAAAGAACATGTAGTCTCTGTGCCACACCGGGATCTTCAAAGTAAGACATCTATGAATT 4132
Query 4278 CTAAGTATGAAATAGAAAAGAGGAAAAAGAAACCCAATTACTCTACTCAGAAAAGTTATC 4337
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 4133 CTAAGTATGAAATAGAAAAGAGGAAAAAGAAACCCAGTTACTCTACTCAGAAAAATTATC 4192
Query 4338 CCAGTTCCCTGCCTTATGTGTCTGACACTAAGAAAGATGCTAACCCTCCAATTCATATCA 4397
|||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 4193 CCAGTTCCCTGCTTTTTGTGTCTGACACGAAGAAAGATGCTAACCCTCCAATTCATATCA 4252
Query 4398 CAAAGCGTCACACTTGGCATCGAAAGTCCGATGCTTCTCCCTCTTCTTTTGTAGCTGCCA 4457
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 4253 CAAAGCGTCACACTTGGCATCGAAAGTCCGATACTTCTCCCTCTTCTTTTGTAGCTGCCA 4312
Query 4458 AGCCTTTGTCGTCTACGTTGTCTACACAACAGAAGTTTCCCAAAGTGACTGCCCAATCTA 4517
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4313 AGCCTTTGTCTTCGACGTTGTCTACACAACAGAAGTTTCCCAAAGTGACTGCCCAATCTA 4372
Query 4518 ATAATAGTTACGTACGTAAAGGGAATAGTCTTCTTCGAAAACCCTCACATGGTTCTCCTG 4577
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 4373 GTAATAGTTACGTACGTAAAGGGAATAGTCTTCTTCGAAAACCCTCACA---TTCTCCTG 4429
Query 4578 GTGCTGCCCTTGGAATACCTCCATCTGCTATCCAGTTGAACCATTTCACTGTGGAAGACA 4637
|| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 4430 GTACTGCCCTGGGAATGCCTCCATCTGCTATCCAGTTGAACCATTTCACTGTGGAAGACA 4489
Query 4638 AAAGCACGGGATCTTCCAATATGGTTGATGTAGATAATGCTTCTTCACTTGTTAAAACAG 4697
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4490 AAAGCACGGGACCTTCCAATATGGTTGATGTAGATAATGCTTCTTCACTTGTTAAAACAG 4549
Query 4698 GGGAAATAGCTACTCTTGAGAGGCAGTCAAAGCCTCCCTCAGACAGCAGCACTTCCAAAC 4757
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4550 GGGAAATACCTACTCTTGAGAGGCAGTCAAAGCCTCCCTCAGACAGCAGCACTTCCAAAG 4609
Query 4758 TATCAAATGCCATCGCTACTTCATCAGGAAAATGTGCT-TTATCTTACAGCACGGATCAT 4816
|||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct 4610 TATCAAATGCCATCGCTACTTCTTCAGGAAAATGTG-TGTTATCTTACAGCACGGATCAT 4668
Query 4817 CTCACCACTGGTTTACCTGAGTCTATCATGGATTCTGCTACATCTGGAGAAGCTAATTTT 4876
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4669 CTCACCCCCGGTTTACCTGAGTCTATCATGGATTCTGCTACATCTGGAGAAGCTAATTTT 4728
Query 4877 CCACATTCTGGTGGGGACACATTGAAGACATCTGATACACTGATTCAGACGGGTTATGCT 4936
||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||
Sbjct 4729 CCACATTCTGGTGGGGATACATTGAAGACATTTGATACACTAATTCAGACGGGTTACGCT 4788
Query 4937 TCAGATTGCCAGCAGAAGAGAAATCCGTCTGACTTGGATTCTTCAAATTTGAAGAGAATG 4996
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 4789 TCAGATTGCCAGCAGAAGAGAAATCCGTCTGACTTGGATTCTGCGAATTTGAAGAGAATG 4848
Query 4997 GTATATGTCAAGAGAAAGGCAAATCAGTTGGTTGCAGCTTCAGATATTCATGATGTAAGT 5056
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 4849 GTATATGTCAAGAGAAAGGCAAATCAGATGGTTGCAGCTTCAGATATTCATGGTGTAAGT 4908
Query 5057 CAGAACCAGATTCCTTCCTCTGATGGGTACTTTAAGCGAAGTAAAAATCAGCTAGTAAGG 5116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4909 CAGAACCAGATTCCTTCCTCTGATGGGTACTTTAAGCGAAGTAAAAATCAGCTAGTAAGG 4968
Query 5117 AATTCAGAGAGCCGTTGCAATCAGTCAATTTCCTTGCCTGATGATGCATTAGATACACGA 5176
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 4969 AATTCAGAGAGCCGTTGCAATCAGTCAATTTCCTTACCTGATGATGCATTAGATACACGA 5028
Query 5177 TCAGCTGCAAACATGGTTTCGGAAAGACCATCTAGCTCAGCATTCTCTGACTCTGCTGTC 5236
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5029 TCAGCTGCAAACATAGTTTCGGAAAGATCATCTAGCTCAGCATTCTCTGACTCTGCTGTC 5088
Query 5237 ATGCGACCATTTAAGCAATCAAAGTTTTCTCTGGTTTGGACGCAAAATGATCCGCAGCCA 5296
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 5089 ATGCGACCATTTAAGCAATCAAAGTTTTCTCTGGTATGGACGCAAAATGATCCGCAGCCA 5148
Query 5297 AGAATGCCCATAGCTCACATGCGAAATCAGAATATTGTGCCGCAACTTGTTCCCTGGAAA 5356
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 5149 AGAATGCCCATAGCTCACATGCGATATCAGAATATTTTGCCGCAACTTGTTCCCTGGAAA 5208
Query 5357 AGAGTGACGTACTGGAGAAGATTAATGAACTCAGTGTCTGCTTTCCGAAATGGTTCTTCT 5416
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 5209 AGAGTGACATACTGGAGAAGATTAATGAATTCAGTGTCTGCTTTCCGAAATGGTTCTTTT 5268
Query 5417 CTCAACATTAG 5427
| |||||||||
Sbjct 5269 CCCAACATTAG 5279
Score = 2039 bits (1104), Expect = 0.0
Identities = 1437/1582 (91%), Gaps = 86/1582 (5%)
Strand=Plus/Plus
Query 149 ATGGATTCTTCTCATTACAATCCTACCTACGATCCATGGAATTCTCCTTACTCTCCTCAT 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATTCTTCTCATTACAATCCTACCTACGATCCATGGAATTCTCCTTACTCTCCTCAT 60
Query 209 CTTCAtcctccctctgct-c-ct-cttccgccgccaccgccgttaccgcctcctcctcct 265
||||||||||| |||||| | || ||||||||||||||||||||| ||||||||||||
Sbjct 61 CTTCATCCTCCTTCTGCTCCTCTCCTTCCGCCGCCACCGCCGTTA---CCTCCTCCTCCT 117
Query 266 cctcGTCAATCTCATCCCGAAAGCCCTAATTTATATGGTCGATCAACTCAGAGCAATGGT 325
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 118 CCTCGTCAATCTCATCCCGAGAGCCCTAATTTATATGGTCGATCAACCCAGAGCAATGGT 177
Query 326 CAACGTCAAGATTACCTCCATCAATACTCTCATCATCGCCAAGATCTTCCGCCCAATACG 385
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 178 CAACGTCAAGATTACCACCATCAATACTCTCATCATCGCCAAGATCTTCCGCCTAATCCG 237
Query 386 GTGGTTAATCAGCCGACTTCAAACTACTACCAG---CATCCGCCACCGCTCCAGCAACAG 442
| |||||||||||| ||||||||||||||||| |||||| |||||||||||||||||
Sbjct 238 GCGGTTAATCAGCCTTCTTCAAACTACTACCAGCATCATCCGTCACCGCTCCAGCAACAG 297
Query 443 CATCAGCCACTATCGCTTcagcagcagcagcagcaTCCTCAATACATTCCTCAGCAGGTT 502
|||||||||| | || || |||||||||||||||||||||||||||||||||||| |||
Sbjct 298 CATCAGCCACCACCG-TT--GCAGCAGCAGCAGCATCCTCAATACATTCCTCAGCAAGTT 354
Query 503 AGTTATGAGCCTCAAAGAATATCACAGCCGTTGACATCGAGTATTCAATGT-----A--C 555
||||| ||||||||||||||||| ||||||||| ||||||||||||||||| | |
Sbjct 355 AGTTACGAGCCTCAAAGAATATCGCAGCCGTTGTCATCGAGTATTCAATGTAAAGAATCC 414
Query 556 -G-G--A-ATCTCAGTCTGATTGGGTTGGGTTCAATGAAAAGCGGCTTGATTCATGGACA 610
| | | | |||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 415 AGAGTTATAGCTCAATCTGATTGGGTTGGGTTCAATGAAAAGCGACTTGATTCATGGACA 474
Query 611 GTGGATTCAGGTCCGGGTCGAAGCCGAGTGGATGATGGTCCAAGCCGTAACTATCAGTAT 670
| |||| | | ||||||||| | | | ||| |||||||||||||||||||||||||
Sbjct 475 GGGGATGCTGCTCCGGGTCG-A--C---TTGATTCTGGTCCAAGCCGTAACTATCAGTAT 528
Query 671 GACTACAGCCGTAAC---TC------G---TCGGGTGTTAATCGTGGTTTAGATGGTAGT 718
||||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct 529 GACTACAGCCGTAACTTGTCGAGGGAGTCTTCGGGTGTTAATCGTGGTTTAGATGGTAGT 588
Query 719 TCTAGGTCTAGAGATGAGTTTCGTAGTCTTGGATATGCTAGAAAAGAATCTGGAGTCACT 778
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 589 TCTAGGTCTAGAGATGAGTTTCGTAATCTTGGATATGCTAGAAAAGAATCTGGAGCCACT 648
Query 779 AGAACAGAGGGGAATTATCAAGCCCGTGGTCAGTTAAAATCAGAATCCGATAGATATGTT 838
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 649 AGGACAGAGGGGAATTATCAAGCCCGTGGTCAGTTAAAATCAGAATCCGATAGATTTGTT 708
Query 839 AGGGGTTTAGGTGATGGAAATAGGGTTTTATCCTCTAGTGTTGGTTATGGCAGTGACAGA 898
|||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 709 AGGGGTTTAGATGAGGGAAATAGGGTTTTATCTTCTAGTGTTGGTTATGGCAGTGACAGA 768
Query 899 TATGGTCTTACAGTAAGTCGAGATGTGACTAGGTCATCAGCAAGCCGTGAAGGGGCT--- 955
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 TATGGTCTTACAGTAAGTCGAGATGTGACTAGGTCATCAGCAAGCCGTGAAGGGGCTAGA 828
Query 956 ----AGA-----GA--AA-CACGTAATGAAGGGAGGACTCTCTATCCCGAGAAAAAGGAT 1003
||| || || ||||||||||||||||||||||| ||||| ||||||| |||
Sbjct 829 AACCAGAGGTGGGATGAAGCACGTAATGAAGGGAGGACTCTCCATCCCCAGAAAAAAGAT 888
Query 1004 GATTACTATCATTCTGAGATTGAACAATATTTTGATCGTGGAAGGAGAGAGGCGAGCAAT 1063
|||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct 889 GATTACTATCATTCTGAGATTGAACAATATTTTGATCGTGGAAGGAGAGAGGAGATCAGT 948
Query 1064 GAGTTGAATCGAACACCTAGGAAACAAGTTCAGAAGAAGAGTGCTCTGCTAAGGCTTGAA 1123
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 949 CAGTTGAATCGAACACCTAGGAAACAAATCCAGAAGAAGAGTGCTCTGCTAAGGCTTGAA 1008
Query 1124 ACTCCAAGATCCTATAAAAACAGTAGAGAGAATGAATGGTCTCGGCAACATAATCATCAT 1183
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1009 ACTCCAAGATCCTATCAAAACAGTAGAGAGAATGATTGGTCTCGGCAACATAATCATC-- 1066
Query 1184 AATGGTAATGGGAAAAGGTTTA-ACTCTAACTCATATAGGGGTAAGGAACACTTGGGTCA 1242
| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||
Sbjct 1067 -A---CAATGGGAAAAGG-TTATACTCTAACTCATACAGGGGTAAGGAACACTTGGGTCA 1121
Query 1243 TTCTGATCGTGGACTGGTGGAGAAGCAAAGGGGGAGAAGTCCAGTGGATCTTGATATATC 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1122 TTCTGATCGTGGACTGGTGGAGAAGCAAAGGGGGAGAAGTCCAGTGGATCTTGATATATC 1181
Query 1303 ATTTAAATCGAATGTTCTGGTAGCTAAGCCCGTAGCATCACCTACAAGTGCAGGCATCCG 1362
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1182 ATTTAAATCGAATGCTCTGGTAGCTAAGCCCGTAGCATCACCTACAAGTGCAGGTATCCG 1241
Query 1363 TTCGGGTGCGTCTGTGACACCTAGGTCTATTAAAGCTAGAAGAGCTTTGCTTTCTGATAA 1422
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1242 TTCGGGCGCGTCTGTGACACCTAGGTCTATTAAAGCTAGAAGAGCATTGCTTTCTGATAA 1301
Query 1423 AAATGAGAAAGTTTCAGTAACTGAAAGAAATGGAAAGCTGGGAACCCATTTGTCAGATGA 1482
||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1302 AAATGAGAAAGCTTCAGTAACTGAAAGAAATGGAAAGCTGGGAACCCAGTTGTCATTTGA 1361
Query 1483 G-A--TTTCGGTTTCTGAGGGCTTCAGACGGTCTACAAGGCAAACTACTGCATCTAAAAA 1539
| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 GGAGGTTTCGGTTTCTGAGGGCTTCAGACGGTCTACAAGGCAAACTACTGCATCT----- 1416
Query 1540 TGAAAAAGAACCTGACAGTCACTCAACCCCGTCTTCCAGTGATTCTGGTGGTAAGCTAAA 1599
|||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1417 -GAAAAACAACCTGACAGTCACTCAACCCCGTCTTCCAGTGATTCCGGTGGCAAGCTAAA 1475
Query 1600 CAAGGTACGATTTGTTAATGGTGTCGTTCAGGACAGCAAAGTCAAACTTACCGATTCAGG 1659
|||||| | | | | | | | |||||||||||||||||||||||||| ||| ||||
Sbjct 1476 CAAGGT-C-A---G--A-T--T-T-GTTCAGGACAGCAAAGTCAAACTTACTGATACAGG 1523
Query 1660 TCCTGAAGCTTCAACTCATGAT 1681
||||||||||||||||||||||
Sbjct 1524 TCCTGAAGCTTCAACTCATGAT 1545
Score = 1530 bits (828), Expect = 0.0
Identities = 876/900 (97%), Gaps = 0/900 (0%)
Strand=Plus/Plus
Query 5750 GATGTTGATTCACCGTGCTCTGGACCTTCTGAAAATGGAAAGGGTGTGAAAAGACCGTTT 5809
||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| ||
Sbjct 5500 GATGTTGATCCACCGTGCTCTGGACCTTCTGAAAATGGGAAGGGTGTGAAAATACCGATT 5559
Query 5810 ATCCCAAAGAGATTGGTGATCGGCAATGAAGAATATGTTCGGTTCGGGAATGGTAACCAG 5869
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 5560 ATCCCAAAGAGATTGGTGATCGGCAATGAAGAATATGTTCGGTTCGGAAATGGTAACCAG 5619
Query 5870 CTTGTCAGAGATCCAAAGAAACGAACTCGTGTGTTGGCAAATGAGAAAGTCAGATGGAGC 5929
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5620 CTTGTCAGAGATCCAAAGAAACGAACTCGTGTGTTGGCAAATGAGAAAGTGAGATGGAGC 5679
Query 5930 CTGCACAATGCCCGGTTGCGGTTGGCTAAAAAGAAGAAGTACTGCCAGTTTTTCACAAGA 5989
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5680 CTGCACAATGTCCGGTTGCGGTTGGCTAAAAAGAAGAAGTACTGCCAGTTTTTCACAAGA 5739
Query 5990 TTTGGGAAATGCAACAAAGATGACGGAAAATGTCCCTATGTTCATGATCCCTCGAAAATT 6049
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 5740 TTTGGGAAATGCAACAAAGATGACGGAAAATGTCCCTATGTTCATGACCCCTCGAAAATT 5799
Query 6050 GCTGTTTGCACCAAATTTTTGAATGGATTGTGTGCAAATGCAAATTGCAAATTGACTCAC 6109
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 5800 GCTGTTTGCACCAAATTTTTGAATGGATTGTGTGCCAATGCAAATTGCAAATTGACTCAC 5859
Query 6110 AAGGTCATTCCAGAAAGGATGCCTGATTGTTCTTATTATCTGCAAGGCCTATGCAACAAT 6169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5860 AAGGTCATTCCAGAAAGGATGCCTGATTGTTCTTATTATCTGCAAGGCCTATGCAACAAT 5919
Query 6170 GAGGCATGTCCATATAGGCATGTGCATGTCAATCCGATCGCCCCTATATGTGATGGGTTT 6229
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 5920 GAGGCATGTCCATATAGGCATGTGCATGTCAATCCGAGCGCCCCTATATGTGATGGGTTT 5979
Query 6230 TTAAAGGGATACTGTTCCGAAGGAGACGAGTGTCGGAAGAAGCATTCCTACAACTGCCCG 6289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 5980 TTAAAGGGATACTGTTCCGACGGAGACGAGTGTCGGAAGAAGCATTCCTACAACTGCCCG 6039
Query 6290 GTTTTCGAAGCCACTGGATCATGCTCTCAAGGATTGAAATGCAAGCTCCACCACCCcaag 6349
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 6040 GTTTTCGAAGCCACTGGATCATGCTCTCAAGGATCAAAATGCAAGCTCCACCACCCCAAG 6099
Query 6350 aaccaaagcaaaggaagaaagagaaaaagaacaaacgaaccatcacagaaaaaTGCCCGT 6409
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 6100 AACCAAAGCAAAGGAAGAAAGAGAAAAAGACCAAGCGAACCATCACAGAAAAATGCCCGT 6159
Query 6410 AGGCGTTACTTTAGTTCACTTCACAACATCCTTTCCGAGTCTGAGCCAATGGTATTCAAT 6469
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6160 GGGCGTTACTTTAGTTCACTTCACAACATCCTTTCCGAGTCTGAGCCAATGGTATTCAAT 6219
Query 6470 AGGCGTTCTACTGACAGTGAAGTTTTTGGAATGGAAAGCCTCGATTTTATAACCCTTGGC 6529
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 6220 AGGCGTTCTACTGACAGTGAAGTTTTTGGAATGGAAGGCCTCGATTTTATAACCCTTGGC 6279
Query 6530 ACTGCTGAGTATGAAGCCGGTGATGACAATGATCCAGCCACCGTGCAATCTATCTCCAGT 6589
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 6280 ACTACTGAGTATGAAGCCAGTGATGACAATGATCCAGCCACCGTGCAATCTATCTCCAGT 6339
Query 6590 GACAGTGAATCACTAATCTCAATATACAATCTAATCACACCAGTAGCTCTGATGCAGTAA 6649
||||| ||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct 6340 GACAGCGAATCACCGATTTCAATATACAATCTAATCACACCAGTAGCTCTAATGCAGTAA 6399
Score = 878 bits (475), Expect = 0.0
Identities = 571/615 (93%), Gaps = 16/615 (3%)
Strand=Plus/Plus
Query 1676 CATGATACAGAAAAGATCTCTAGTTTTTGTGAGACTTTGATAGAGGCCAAGGATGACATT 1735
|||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1573 CATGCTGCAGAAAAGATCTCTAGTTTTTGTGAGACTTTGAAAGAGGCCAAGGATGACATT 1632
Query 1736 AATGTCAAACATGGTATCAATACGGAGGCTTGCTCCACTGAGGAAGGTGTTATTGATGGA 1795
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1633 AATGTCAAACATGGTAGCAATATGGAGGCTTGCTCCACTGAGGAAGGTGTTATTGATGGA 1692
Query 1796 AATCAAAGTACACTGAAGTCTCATGAAGATGTGTTGGACAGAACGAGCACTGATTGTAAT 1855
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1693 AACCAAAGTACACTGAAGTCTCATGAAGATGTGTTGGACAGAACGAGCACTGATTGTAAT 1752
Query 1856 GCAGGCGAAGCGCTTTTGCCGAAGGTCATGGAGATGGATGAAATCCTGAAGACAAAGACA 1915
|| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1753 GCGGGCGAAGCGCTTATGCCGAAGGTCATGGAGATGGATGAAATCGTGAAGACAAAGGCA 1812
Query 1916 ACAATCAATACGTCTCCTGGTAAGTTACCTGTATCATGGCCAACCGTCGCTGATCTTTCT 1975
| |||||||| ||||||||||| |||||||||||||||||||| | || ||||||||||
Sbjct 1813 AAAATCAATATATCTCCTGGTAAATTACCTGTATCATGGCCAACAGCCGATGATCTTTCT 1872
Query 1976 GGGTGTTCTGAGGACATGGATTGTGATGAGGATATGGATTGTGATGAGGACATGGATTGT 2035
|||||||||||||||||||||||||| || || | | | | ||||||||||
Sbjct 1873 GGGTGTTCTGAGGACATGGATTGTGA--AG-AT--G-AC-G--A------CATGGATTGT 1917
Query 2036 ATACCATCAAGGAATATACCAATGATGGAAGTAAATACTGGGTTTGAAGAAAGAAAATCC 2095
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1918 ATACCATCAAGGAATATACCAATGATGGAAGTAAGTACTGGGTTTGAAGAAAGAAAATTC 1977
Query 2096 ATTAATTCATCTGATGGATCTTTGGGTTATGGAGGAAAGGATTTTCAGAAGCCATATCTA 2155
||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||
Sbjct 1978 ATTAATTCATCTGATGGATCTTTGGGTTACGGAGGAAAGGATTTTCAGAAGTTATGTCTA 2037
Query 2156 GATGCTTCCATCTATTTTAATAGAGAAGACCCTGGTGATAAGGTGTTGGCGAAGTCAGAT 2215
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2038 GATGCATCCATCTATTTTAATAGAGAAGACCCTGGTGATAAGGTGTTGGCGAAGTCAGAT 2097
Query 2216 ATCGGTGGTATTGAAGATGACAACAAGAGGATTGATAAGAATGTAGATTCCTTGTCTCCT 2275
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 2098 ATCGGTGGTATTGAAGATGACAACAAGAGGATTAATAAGAATCTAGATTCCTTGTCTCCT 2157
Query 2276 GAAAATGACTCCTCT 2290
||||||| ||| |||
Sbjct 2158 GAAAATGCCTC-TCT 2171
Score = 300 bits (162), Expect = 1e-79
Identities = 170/174 (98%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 5577 AGGAGGCCACATTGGCTGTGGCTGCATACTCAAAGAAAGAAAGTGAAAAGCAATCTGGAC 5636
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 5278 AGGAGGCCACATTGGCTGTGGCTGCATTCTCAAAGAAAGAAAGTGAAAAGCATTCTGGAC 5337
Query 5637 AAAATAATACTAGTACGGCGAGCAGAAACCATCTGGCACGGGAGCGCGTTTTCAGGTTTG 5696
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5338 AAAATAATAATAGTATGGCGAGCAGAAACCATCTGGCACGGGAGCGCGTTTTCAGGTTTG 5397
Query 5697 GTTCCCTTCGTTATAAAATGGACTCTTCAAGACGAACTCTTCAGAGAATATCTG 5750
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5398 GTTCCCTTCGTTATAAAATGGACTCTTCAAGACGAACTCTTCAGAGAATATCTG 5451
> Ahg909351 jgi|Araly1|909351|Al_scaffold_0002_2432
Length=4113
Score = 549 bits (297), Expect = 1e-154
Identities = 588/722 (81%), Gaps = 45/722 (6%)
Strand=Plus/Plus
Query 5813 CCAAAGAGATTGGTGATCGGCAATGA-AGAATATGTTCGG-TTCGGGAATGGTAACCAGC 5870
||||||||||| |||||| ||||| | ||| |||| || || | ||| |||| ||||
Sbjct 3289 CCAAAGAGATTAGTGATCAAAAATGATA-AATCTGTTTGGATT-AGAAATTGTAATCAGC 3346
Query 5871 TTGTCAGAGATCCAAAGAAACGAACTCGTGTGTTGGCAAATGAGAAAGTCAGATGGAGCC 5930
||| |||||||||||||||||||||| |||||||| |||||||||| |||||||||||||
Sbjct 3347 TTGCCAGAGATCCAAAGAAACGAACTTGTGTGTTGACAAATGAGAAGGTCAGATGGAGCC 3406
Query 5931 TGCACAATGCCCGGTTGCG-GTTGGCTAAAAAGAAGAAGTACTGCCAGTTTTTCACAAGA 5989
|| |||||| ||||||||| | |||||||||||| ||| |||||||||||||||||||||
Sbjct 3407 TGAACAATGTCCGGTTGCGAG-TGGCTAAAAAGATGAAATACTGCCAGTTTTTCACAAGA 3465
Query 5990 TTTGGGAAATGCAACAAAGATGACGGAAAATGTCCCTATGTTCATGATCCCTCGAAAATT 6049
||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||||
Sbjct 3466 TTTGGGAAATGCAACAAAGATGATGGAAAATGTCCATATGTTCATGATCCTTCAAAAATT 3525
Query 6050 GCTGTTTGCACCAAATTTTTGAATGGATTGTGTGCAAATGCAAATTGCAAATTGACTCAC 6109
|| |||||||| ||||| ||| |||||||||||| ||| || | ||||||||||||||
Sbjct 3526 GCAGTTTGCACAAAATTCCTGAGTGGATTGTGTGCCAATCCAGAGTGCAAATTGACTCAT 3585
Query 6110 AAGGTCATTCCAGAAAGGATGCCTGATTGTTCTTATTATCTGCA-AGGCCTATGCAACAA 6168
||||| | | | | | | | | | | | ||| | || ||| |||||||| ||
Sbjct 3586 AAGGT--T-C-A-ACA--A--C-TAAAT---C--ATTGCCC-CAGAGGACTATGCAATAA 3629
Query 6169 TGAGGCATGTCCATATAGGCATGTGCATGT-CAATCCGA-TCGCCCCTATATGTGATGGG 6226
||| ||||||||||||||||||||||||| || || | | || | |||||||| |||
Sbjct 3630 CGAGCCATGTCCATATAGGCATGTGCATGTTCA-TCAAAAT-GCTGCAATATGTGAAGGG 3687
Query 6227 TTTTTAAAGGGATACTGTTCCGAAGGAGACGAGTGTCGGAAGAAGCATTCCTACAACTGC 6286
||||||| ||| |||||||| || | | | ||||||||||||||||| | |||| ||||
Sbjct 3688 TTTTTAAGGGGCTACTGTTCTGATGAAAATGAGTGTCGGAAGAAGCACACATACACCTGC 3747
Query 6287 CCGGTTTTCGAAGCCACTGGATCATGCTC-TCAAGGAT-TGAAATGCAAGCTCCACCACC 6344
|| |||||||||||||| ||||| || || |||||| | |||| ||||| |||||||| |
Sbjct 3748 CCAGTTTTCGAAGCCACAGGATCTTG-TCCTCAAGGGTCTGAA-TGCAAACTCCACCATC 3805
Query 6345 Ccaagaaccaaagcaaaggaa-gaaagagaaaaagaacaaacgaaccatcacagaaaaaT 6403
|||| |||| ||||||||||| |||| || |||||| ||| ||| ||| || ||||||
Sbjct 3806 CCAAAAACCTAAGCAAAGGAAAGAAA-AGGAAAAGAGCAAGTGAATCATGGCATAAAAAT 3864
Query 6404 GCCCGTAGGCGTTACTTTAGTTCACTTCACAA-CATCCTTTCC-GAGTCTGAGCCAATGG 6461
| | || ||||||||||| |||| | ||||| |||| || || |||||||||||||||
Sbjct 3865 GTCAGTGGGCGTTACTTTGGTTCCCCGCACAAACATC-TT-CCAGAGTCTGAGCCAATGT 3922
Query 6462 TAT-TCAAT-AGGCGTT-CTACTGACAGTGAAGTTTTTGGAATGGAAAGCC-TCGATTTT 6517
| | ||||| ||| || || ||||| ||| ||||||||||| |||| ||| | || |||
Sbjct 3923 T-TGTCAATGAGG--TTGCTGCTGACGGTGTAGTTTTTGGAAGGGAA-GCCCTTGACTTT 3978
Query 6518 AT 6519
||
Sbjct 3979 AT 3980
Score = 231 bits (125), Expect = 4e-59
Identities = 484/647 (75%), Gaps = 65/647 (10%)
Strand=Plus/Plus
Query 4970 TTGGATTCTTCAAATTTGAAG-AGAATGGTATATGTCAAGA-GAAAGGCAAATCAGTTGG 5027
||||| |||||||| | ||| | ||| ||||||| |||| |||| ||||||||||| |
Sbjct 2581 TTGGAATCTTCAAA-TCCAAGTAAAATTTTATATGTAAAGAGGAAA-GCAAATCAGTTTG 2638
Query 5028 TTGCAGCTTCAGATATTCATGATGTAAGTCAGA-ACCA-GATTCCTTCCTCTGATGGGTA 5085
| ||||||||||||| |||| || |||| | | | || ||||||| ||| || | | ||
Sbjct 2639 TAACAGCTTCAGATATGCATGGTGCAAGT-A-ATAGCAGGATTCCTCCCTGTGTTAGCTA 2696
Query 5086 CTTTAAGCGAAGTAAAAATCAGCTAGTAAGGA-ATTCAGAGAGCCGTTGC-AATCA-G-T 5141
||| | | ||||||||| ||| ||||| | || |||||||||||| |||| ||||| |
Sbjct 2697 CTTCAGGAGAAGTAAAAGTCAACTAGTTA-GAGATTCAGAGAGCC-TTGCTAATCAGGAG 2754
Query 5142 CAATTTCCTTGCCTGATGATGCATT-AGATACAC-GATCAGCTGCAAACATGGTTTCGGA 5199
||||| || || |||| || || | || ||| || ||||||| || ||||| || |
Sbjct 2755 AAATTT--TTATCTTATGAAGC-TTCAAATTCACAGA-CAGCTGCGAAGATGGTGTCAAA 2810
Query 5200 AAGA-CCATCTAGCTCAGC-ATTCTCTGACTCTGCTGTCATGCGACCATTTAAGCAATCA 5257
|||| || ||||||| || || ||||| | |||| | || |||| ||||| || |
Sbjct 2811 AAGATCC-TCTAGCTTGGCGCTT-TCTGAATTTGCTATTGTGAGACCCTTTAATCATTTT 2868
Query 5258 AAGTTTTCTCTGGTTTGGACGC-AAAATGATCCGCA-GCCAAG-AATGCCCAT--AGCTC 5312
|| |||||| |||| ||||||| ||| || || | |||| || ||| || || ||
Sbjct 2869 AATTTTTCTTTGGTCTGGACGCTGAAA-GAACC-AATATCAAGAAAGGCCAATAGAGTTC 2926
Query 5313 ACATGCGAAATCAGAATATTGTGCCGCAACTTGTTCCCTGGAAAAGAGT-GACGTACTGG 5371
|||| | |||||| || || ||||| | ||| | ||||||||| | ||| ||||||
Sbjct 2927 ACATAAGCCTTCAGAAGATGGTCCCGCAGCCAGTTTCTTGGAAAAGA-TCGACTTACTGG 2985
Query 5372 AGAAGATTAATGAACT-CAGTGTCTGCTT-TCCGAAATGGTTC-TTCT-C-TCAACA--T 5424
|||||||||||||| | ||| || | || | | ||||||||| || | | || || |
Sbjct 2986 AGAAGATTAATGAA-TCCAGCCTC-GGTTCTGCTAAATGGTTCTTTTTCCATCGCCAGTT 3043
Query 5425 T-A-G-CCGAA-A----GT-T---GTC---AA-T---GATGA-G-G-AAGAGACACACAA 5462
| | | | ||| | | | ||| || | ||||| | | || ||||| |||
Sbjct 3044 TGATGACAGAACATTCCATCTCCAGTCGAAAATTGCGGATGATGAGAAAAAGACATACAG 3103
Query 5463 TTTACACAAGATCAACTAATGGGTATTCCCTCAGAAAATCTAAGGTATTAAGTGTTGGTG 5522
|||||||||||||||||||||||||||| || | ||| || || || |||||||||||||
Sbjct 3104 TTTACACAAGATCAACTAATGGGTATTCGCTTACAAAGTCCAAAGTGTTAAGTGTTGGTG 3163
Query 5523 GGTCGCATTTAAAATGGTCCAAGTCCATTGAGAGAGACTCGA-GAAA 5568
|||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 3164 GGTCGCATTTAAAATGGTCCAAGTCCATTGAGAGAGGCTCGAAGAAA 3210
> Ahg481034 jgi|Araly1|481034|fgenesh2_kg.4__94__AT2G21660.2
Length=671
Score = 139 bits (75), Expect = 3e-31
Identities = 114/132 (86%), Gaps = 6/132 (5%)
Strand=Plus/Plus
Query 6683 AAGCTCAAGGGGATTCAGATTCGTCACATTCAAGGATGAGAAATCCATGAAGGATGTGAT 6742
||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||
Sbjct 160 AAGATCAAGGGGATTCGGATTCGTCACCTTCAAGGATGAGAAATCCATGAAGGATGCGAT 219
Query 6743 CGAGGGATTGG-CTGGACAAGAGCTCGATGGTCGCAGCATCACTGTGATAATG-G-CTCA 6799
|| ||| || | ||||||||||||||||| || ||||||||||| ||| | | ||||
Sbjct 220 TGAAGGAATGAAC-GGACAAGAGCTCGATGGACGTAGCATCACTGT--TAACGAGGCTCA 276
Query 6800 GTTACGAGGAAG 6811
|| |||||||||
Sbjct 277 GTCACGAGGAAG 288
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 273329489286
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5