BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G22150.1
Length=1971
Score E
Sequences producing significant alignments: (Bits) Value
Ahg313103 jgi|Araly1|313103|fgenesh1_pm.C_scaffold_1001883 2023 0.0
Ahg927205 jgi|Araly1|927205|scaffold_202766.1 1522 0.0
> Ahg313103 jgi|Araly1|313103|fgenesh1_pm.C_scaffold_1001883
Length=2052
Score = 2023 bits (1095), Expect = 0.0
Identities = 1171/1209 (97%), Gaps = 0/1209 (0%)
Strand=Plus/Plus
Query 763 TGGAATTGGCAGACAATACTCATTAGTGCATCGTTCTTGATCTTCCTTCTCATCTCCAAG 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 844 TGGAATTGGCAGACAATACTCATTAGTGCATCGTTCTTGATCTTCCTTCTCATCTCCAAG 903
Query 823 TTTATCGGGAAGAGAAACAAGAAACTGTTTTGGATTCCAGCTATTGCTCCGTTAGTATCT 882
|| || ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 904 TTCATAGGGAAGAAAAACAAGAAACTGTTTTGGATTCCAGCGATTGCTCCGTTAGTATCT 963
Query 883 GTCATCATTTCAACCTTCTTCGTCTACATAACCCGAGCCGACAAGAAAGGAGTTCAGATA 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 GTCATCATTTCAACCTTCTTCGTCTACATAACCCGAGCCGACAAGAAAGGAGTTCAGATA 1023
Query 943 GTGAAACATCTTGACAAAGGTCTGAACCCTTCTTCTTTGCGTCTAATATATTTCTCGGGC 1002
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct 1024 GTGAAACATCTTGACAAAGGTCTAAACCCTTCTTCTTTGCGTCTAATATACTTCTCCGGC 1083
Query 1003 GATTACCTTCTCAAGGGCTTCCGCATAGGCGTTGTCTCAGGCATGGTTGCCTTGACGGAA 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 GATTACCTTCTCAAGGGCTTCCGCATAGGCGTTGTCTCAGGCATGGTTGCCTTGACGGAA 1143
Query 1063 GCTGTAGCGATAGGAAGAACATTTGCAGCAATGAAAGACTACCAAATCGATGGTAACAAA 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144 GCTGTAGCGATAGGAAGAACATTTGCAGCAATGAAAGACTACCAAATCGATGGTAACAAA 1203
Query 1123 GAGATGGTAGCATTAGGAGCAATGAACGTAATCGGTTCAATGACCTCTTGCTATGTATCC 1182
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1204 GAGATGGTAGCATTAGGAGCAATGAACGTGATCGGTTCGATGACCTCTTGCTATGTATCC 1263
Query 1183 ACCGGTTCTTTCTCAAGATCCGCCGTCAACTTTATGGCCGGATGTCAAACGGCAGTCTCC 1242
|||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1264 ACCGGTTCGTTCTCAAGATCCGCTGTCAACTTCATGGCCGGATGTCAAACGGCAGTCTCC 1323
Query 1243 AACATCATCATGTCCATTGTCGTCCTCTTAACGCTTCTCTTCCTCACTCCTCTTTTCAAA 1302
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 AACATCATCATGTCCATCGTCGTCCTCTTAACGCTTCTCTTCCTCACTCCTCTTTTCAAA 1383
Query 1303 TACACACCCAACGCAATTCTTGCAGCGATCATCATCAACGCTGTGATTCCTTTGGTTGAC 1362
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1384 TACACACCCAACGCAATTCTTGCAGCGATCATCATCAACGCCGTGATTCCTTTGGTTGAC 1443
Query 1363 GTTAATGCTACCATTTTGATCTTCAAGATCGATAAGCTCGATTTTGTTGCTTGTATGGGG 1422
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1444 GTTAATGCTACCATTTTGATTTTCAAGATCGATAAGCTCGATTTTGTTGCTTGTATGGGG 1503
Query 1423 GCtttttttGGTGTCATCTTTGTATCCGTAGAGATTGGCCTTCTAATAGCCGTGGGGATA 1482
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1504 GCTTTCTTTGGTGTCATCTTTGTATCCGTAGAGATTGGCCTTCTAATAGCCGTGGGGATA 1563
Query 1483 TCTTTTGCCAAGATACTTTTGCAAGTTACGAGACCTAGGACAGCGATTCTTGGAAAGATA 1542
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1564 TCTTTTGCCAAGATACTTTTGCAAGTTACGAGACCTAGGACAGCAATTCTTGGAAAGATA 1623
Query 1543 CCAGGGACTTCGGTTTACAGGAATATCAATCAGTATCCTGAAGCGACTAGGATTCCGGGA 1602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1624 CCAGGGACTTCGGTTTACAGGAATATCAATCAGTATCCTGAAGCGACTAGGATTCCCGGA 1683
Query 1603 GTTTTGACAATTCGTGTTGACTCCGCGATTTACTTCTCCAACTCCAATTATGTTAGGGAA 1662
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1684 GTTTTGACAATTCGTGTTGACTCCGCGATTTACTTCTCCAATTCCAATTATGTCAGGGAA 1743
Query 1663 AGGATTCAAAGATGGTTGACAGATGAAGAAGAGATGGTGGAAGCTGCAAGATTGCCTAGG 1722
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct 1744 AGGATTCAAAGATGGTTGACAGATGAAGAAGAGATGGTGAAAGCTGCAAGCTTGCCGAGG 1803
Query 1723 ATCCAGTTTCTTATCATCGAAATGTCACCTGTTACGGACATCGATACTAGTGGTATTCAC 1782
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1804 ATCCAGTTTCTTATCATCGAAATGTCACCTGTTACGGACATCGATACTAGCGGGATTCAT 1863
Query 1783 GCCTTAGAAGACTTGTATAAGTCTCTCCAAAAACGAGACATTCAGTTGGTTCTAGCGAAT 1842
|||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1864 GCCTTAGAAGACTTATATAAGTCTCTCTAAAAACGATACATTCAGTTGGTTCTAGCGAAT 1923
Query 1843 CCAGGACCGCCGGTCATAAATAAGCTACATGTTTCTCACTTTGCGGACTTGATAGGACAC 1902
|||||||||||||||||| |||||||||| |||||||||||||| ||| || |||||||
Sbjct 1924 CCAGGACCGCCGGTCATAGATAAGCTACACGTTTCTCACTTTGCAGACATGTTAGGACAG 1983
Query 1903 GACAAAATCTTTCTGACGGTGGCTGAGGCCGTGGATTCTTGCTCCCCTAAACTGTCCGAC 1962
|||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct 1984 GACAAAATCTTTCTGACGGTGGCTGAAGCCGTGGATTCTTGCTCTCCTAAACTCTCCGAC 2043
Query 1963 GAGGTCTGA 1971
|||||||||
Sbjct 2044 GAGGTCTGA 2052
Score = 1258 bits (681), Expect = 0.0
Identities = 735/762 (96%), Gaps = 0/762 (0%)
Strand=Plus/Plus
Query 1 ATGTCGGCTAGAGCTCATCCTGTGGACGATGACGGAGAGATTTCCCCGGTGGAAAGATCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1 ATGTCGGCTAGAGCTCATCCTGTGGACGATGACGGAGAGATTTCCCCGGTGGATACATCT 60
Query 61 TCCCCGCGGCAAGCAAATACACCGTATGTCCACAAAGTCGAAGTTCCTCCTAAGCAAAAC 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 61 TCCCCGCGGCAAGCAAATACACCGTATGTCCACAAAGTCGAAGTTCCTCCGAAGCAAAAC 120
Query 121 CTTTTCAATGAGTTCATGTACACTTTTAAAGAAACTTTCTTCCACGATGATCCTCTAAGG 180
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 121 CTCTTCAATGAGTTCATGTACACTTTCAAAGAAACTTTCTTCCACGATGATCCTCTAAGG 180
Query 181 CATTTCAAGGACCAGTCAAAATCCAAAAAGCTCATGCTCGGTATCCAGTCCGTCTTTCCG 240
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct 181 CATTTCAAGGACCAGTCAAAGTCCAAGAAGCTCATGCTCGGTATCCAGTCCGTCTTCCCG 240
Query 241 GTTATCGAGTGGGGAAGAAAATATAATCTTAAGTTGTTTCGCGGCGATCTTATTGCCGGT 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 241 GTTATCGAGTGGGGAAGAAAATATAATCTTAAGATGTTTCGCGGCGATCTTATTGCCGGT 300
Query 301 TTAACCATAGCCAGTCTCTGCATTCCTCAGGATATTGGATATGCAAAGCTCGCGAGTCTT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 301 TTAACCATAGCCAGTCTCTGCATTCCTCAGGATATTGGATATGCAAAGCTCGCCAGTCTT 360
Query 361 GACCCTAAGTATGGTCTATATTCAAGTTTTGTTCCTCCGTTGGTGTACGCATGTATGGGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GACCCTAAGTATGGTCTATATTCAAGTTTTGTTCCTCCGTTGGTGTACGCATGTATGGGA 420
Query 421 AGCTCAAAGGATATAGCGATTGGACCCGTTGCAGTGGTTTCACTCCTATTAGGTACTCTG 480
||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct 421 AGCTCAAAGGATATAGCGATTGGACCCGTGGCAGTGGTTTCGCTCCTTTTAGGTACTCTG 480
Query 481 CTTCGTGCTGAGATCGACCCCAACACAAACCCTAATGAATATCTCCGCTTAGCCTTCACC 540
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 481 CTTCGGGCTGAGATCGACCCCAACACAAACCCTAACGAATATCTCCGCTTAGCCTTCACC 540
Query 541 TCCACGTTCTTTGCCGGTGTCACTCAAGCAGCACTCGGATTCTTCAGATTGGGTTTCTTG 600
||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct 541 TCCACGTTCTTTGCCGGTGTCACTCAAGCAGCACTAGGGTTCTTTAGATTGGGTTTCTTG 600
Query 601 ATCGATTTCTTGTCCCACGCGGCGGTGGTAGGTTTCATGGGCGGAGCAGCCATCACCATT 660
||||||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct 601 ATCGATTTCTTATCCCACGCCGCGGTAGTAGGGTTCATGGGTGGAGCAGCCATCACCATT 660
Query 661 GCGCTGCAACAGCTCAAAGGCTTCCTAGGAATCAATAAGTTCACAAAGAAAACCGATATC 720
||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 661 GCGCTTCAACAGCTCAAAGGATTCCTCGGAATCAATAAGTTCACAAAGAAAACCGATATC 720
Query 721 ATCGCGGTTCTTTCTTCCGTAATCAGCTCAGCCCATCACGGA 762
||||||||||||||||||||||||||||||||||| ||||||
Sbjct 721 ATCGCGGTTCTTTCTTCCGTAATCAGCTCAGCCCACCACGGA 762
> Ahg927205 jgi|Araly1|927205|scaffold_202766.1
Length=2014
Score = 1522 bits (824), Expect = 0.0
Identities = 1548/1896 (82%), Gaps = 56/1896 (3%)
Strand=Plus/Plus
Query 104 TTCCTCCTAAGCAAAACCTTTTCAATGAGTTCATGTACACTTTTAAAGAAACTTTCTTCC 163
|||| || ||||||||| | ||||| || ||||||||||| || ||||||||||| ||||
Sbjct 127 TTCCACCGAAGCAAAACATGTTCAAGGATTTCATGTACACATTCAAAGAAACTTTTTTCC 186
Query 164 ACGATGATCCTCTAAGGCATTTCAAGGACCAGTCAAAATCCAAAAAGCTCATGCTCGGTA 223
| ||||||||||| ||| |||| ||||| ||| | ||||| || ||| | |||||||||
Sbjct 187 ATGATGATCCTCTTAGGGATTTTAAGGATCAGCCTAAATCTAAGAAGTTTATGCTCGGTC 246
Query 224 TCCAGTCCGTCTTTCCGGT-TATCGAGTGGGGAAGAAAATATAATCTTAAGTTGTTTCGC 282
|||| |||||||| ||||| | |||| |||||| | || || ||||| || ||||||
Sbjct 247 TCCAATCCGTCTTCCCGGTCT-TCGATTGGGGACGTAACTACAATCTCAAAAAGTTTCGA 305
Query 283 GGCGATCTTAT-TGCCGGTTTAACCATAGCCAGTCTCTGCATTCCTCAGGATATTGGATA 341
|||||||| || | | |||||||| || || |||||||||||||||||||||||||||||
Sbjct 306 GGCGATCTCATCT-CTGGTTTAACAATCGCAAGTCTCTGCATTCCTCAGGATATTGGATA 364
Query 342 TGCAAAGCTCGCGAGTCTTGA-CCCTAAGTATGGTCTATATTCAAGTTTTGTTCCTCCGT 400
|| ||| | |||| |||||| ||| || |||||| ||||||| ||||||||||||||||
Sbjct 365 CGCTAAGTTGGCGAATCTTGATCCC-AAATATGGTTTATATTCGAGTTTTGTTCCTCCGT 423
Query 401 TGGTGTACGCATGTATGGGAAGCTCAAAGGATATAGCGATTGGACCCGTTGCAGTGGTTT 460
||||||| || |||||||| || || | ||||||||| || ||||| || || |||||||
Sbjct 424 TGGTGTATGCTTGTATGGGGAGTTCTAGGGATATAGCAATCGGACCTGTCGCTGTGGTTT 483
Query 461 CACTCCTATTAGGTAC-TCTGCTTCGTGCTGAGATCGACCCCAACACAAACCCTA-ATGA 518
| || | |||| || | ||||||| |||||||| || || |||||||| || | ||||
Sbjct 484 CTCTGTTGCTAGGCACAT-TGCTTCGAGCTGAGATTGATCCAAACACAAATCC-AGATGA 541
Query 519 ATATCTCCG-CTTAGCCTTCACCT-CCACGTTCTTT-GCCGGTGTCACTC-AAGCAGCAC 574
||||||||| ||| ||||||| || ||||||| ||| || ||| |||| | ||||||| |
Sbjct 542 ATATCTCCGCCTT-GCCTTCA-CTGCCACGTT-TTTCGCTGGTATCAC-CGAAGCAGCCC 597
Query 575 TCGGATTCTTCAGATT-GGGTTTCTTGATCGATTT-CTTGTCCCACGCGGCGGTGGTAGG 632
| |||||||||||||| ||| |||||||||||||| ||| ||||||||||| ||||| ||
Sbjct 598 TTGGATTCTTCAGATTAGGG-TTCTTGATCGATTTCCTT-TCCCACGCGGCTGTGGTTGG 655
Query 633 TTTCATGGGCGGAGCAGCCATCACCATTGCGCTGCAACAGCTCAAAGGCTTCCTAGGAAT 692
||||||||||| ||||||||||| || || || || ||||| || |||||||| || ||
Sbjct 656 CTTCATGGGCGGCGCAGCCATCACTATCGCTCTTCAGCAGCTTAAGGGCTTCCTCGGGAT 715
Query 693 CAATAAGTTCACAAAGAAAACCGATATCATCGCGGTTCTTTCTTCCGTAATCAGCTCAGC 752
||| || ||||| |||||||| |||||||| || |||||| || || ||| ||||
Sbjct 716 CAAGAAATTCACCAAGAAAACTGATATCATTGCTGTTCTTGAATCTGTTTTCAAAGCAGC 775
Query 753 CCATCACGGATGGAATTGGCAGACAATACTCATTAGTGCATCGTTCTTGATCTTCCTTCT 812
|||||||| |||||||||||||| ||||||||| ||||||| ||||||| |||||||||
Sbjct 776 TCATCACGGCTGGAATTGGCAGACTATACTCATTGGTGCATCATTCTTGAGCTTCCTTCT 835
Query 813 CATCTCCAAGTTTATCGGGAAG-AGAAACAAGAAACTGTTTTGGATTCCAGCTATTGCTC 871
|| ||| ||||| || |||||| || | ||||||||| || ||| | ||||| ||||| |
Sbjct 836 CACCTCTAAGTTCATTGGGAAGAAG-AGCAAGAAACTATTCTGGGTACCAGCAATTGCGC 894
Query 872 CGTTAG-TATCTGTCATCATTTCAACCTTCTTCGTCTACATAACCCGAGCCGACAAGA-A 929
| || | |||| || |||||||| |||||||| |||||| |||||||||||||||| | |
Sbjct 895 CATT-GATATCAGTTATCATTTCCACCTTCTTTGTCTACTTAACCCGAGCCGACAA-ACA 952
Query 930 AGGAGTTCAGATAGTGAAACATCTTGACAAAGGTCTGAACCCTTCTTCTTTGCGTCTAAT 989
|||||| || || |||||||| |||||| |||| | |||||||| ||| ||| ||||||
Sbjct 953 AGGAGTCCAAATCGTGAAACACCTTGACCAAGGAATCAACCCTTCCTCTCTGCATCTAAT 1012
Query 990 ATATTTCTCGGGCGATTACCTT-CTCAAGGGCTTCCGCATAGGCGTTGTCTCAGGCATGG 1048
|| ||| | || ||| ||||| || |||||| |||| || || || ||| | |||||||
Sbjct 1013 CTACTTCACCGGTGATAACCTTGCT-AAGGGCATCCGGATCGGTGTAGTCGCTGGCATGG 1071
Query 1049 TTGCCTTGACGGAAGCTGTAGCGATAGGAAGAACATTTGCAGCAATGAAAGACTACCAAA 1108
| || || || |||||||||||||| |||||||| ||||| || ||||||||||||||||
Sbjct 1072 TCGCTTTAACAGAAGCTGTAGCGATTGGAAGAACCTTTGCTGCCATGAAAGACTACCAAA 1131
Query 1109 TCGATGGTAACAAAGAGATGGTAGCATTAGG-AGCAATGAACGTAATCGGTTCAATGACC 1167
|||| |||||||||||||||||||||||||| | ||||| ||| | || || ||| |
Sbjct 1132 TCGACGGTAACAAAGAGATGGTAGCATTAGGTA-TGATGAATGTAGTTGGATCGATGTCT 1190
Query 1168 TCTTGCTATGTATCCACCGGTTCTTTCTCAAGATCCGCCGTCAACTTT-ATGGCCGGATG 1226
|||||||| ||| | ||||| |||||||||||||| || ||||| ||| ||||| |||||
Sbjct 1191 TCTTGCTACGTAGCTACCGGATCTTTCTCAAGATCAGCAGTCAA-TTTCATGGCTGGATG 1249
Query 1227 TCAAACGGCAGTCTCCAACATCATCATGTCCATTGTCGTCCTCTTAACGCTT-CTCTTCC 1285
|||||| || || || |||||||| ||||| |||||||| ||||| || || |||||||
Sbjct 1250 TCAAACAGCGGTTTCAAACATCATAATGTCAATTGTCGTTCTCTTGAC-ATTGCTCTTCC 1308
Query 1286 TCACTCCTCTTTTCAAATACACACCCAACGCAATTCTTGCAGCGATCATCATCAACGCTG 1345
| ||||| || ||||| ||||| || ||||| || || ||||| |||||||||||||| |
Sbjct 1309 TGACTCCACTGTTCAAGTACACTCCAAACGCCATCCTCGCAGCTATCATCATCAACGCCG 1368
Query 1346 TGATTCCTTTGGTTGACGT-TAATGCTACCATTTTGATCTTCAAGATCGATAAGCTCGAT 1404
| ||||||||| | || | || ||| | ||||||||||| ||| | |||||||| |||
Sbjct 1369 TAATTCCTTTGATCGATATCCAA-GCTGCTATTTTGATCTTTAAGGTTGATAAGCTAGAT 1427
Query 1405 TTTGTTGCTTGTATGGGGGCtttttttGGTGTCATCTTTGTATCCGTAGAGATTGGCCTT 1464
|| | |||||||| || || || ||||| ||||||||||| ||||| ||||| || |||
Sbjct 1428 TTCATCGCTTGTATTGGAGCATTCTTTGGCGTCATCTTTGTTTCCGTTGAGATCGGACTT 1487
Query 1465 CTAATAGCCGTGGGGATATCTTTTGCCAAGATACTTTTGCAAGTTACGAGACCTAGGACA 1524
|| || ||||| ||| || ||||| ||||| || |||||||| || |||||||| ||
Sbjct 1488 CTCATTGCCGTCTCGATCTCGTTTGCTAAGATCCTCTTGCAAGTAACAAGACCTAGAACT 1547
Query 1525 GCGA-TTCTTGGAAAGATACCAG-GGACTTCGGTTTACAGGAATA-TCAATCAGTATCCT 1581
|| | |||| ||||| || || | | ||||| |||||||| |||| |||| |||||||||
Sbjct 1548 GC-AGTTCTCGGAAATATTCC-GAGAACTTCTGTTTACAGAAATATTCAA-CAGTATCCT 1604
Query 1582 GAAGCGACTA-GGATTCC-GGGAGTT-TTGACAATTCGTGTTGACTCCGCGATTTACTTC 1638
||||| |||| || |||| ||| ||| || || |||||||||||||||||||||||||||
Sbjct 1605 GAAGCCACTATGG-TTCCAGGG-GTTCTT-ACTATTCGTGTTGACTCCGCGATTTACTTC 1661
Query 1639 TCCAACTCCAATTATGTTAGGGAAAGGATTCAAAGATGG-TTGACAGATGAAGAAGAGAT 1697
|||||||| ||||| || || |||||||| || |||||| || | || |||||||| |
Sbjct 1662 TCCAACTCAAATTACGTCAGAGAAAGGATCCAGAGATGGCTTCAT-GAAGAAGAAGAAAA 1720
Query 1698 GGTGGAAGCTGCAAGATTGCCTAGGATCCAGTTTCTTATCATCGAAATGTCACCTGTTAC 1757
||| |||| ||||| | |||||||| |||||||| |||||||||||||||||||||||
Sbjct 1721 GGTAAAAGCAGCAAGCCTACCTAGGATTCAGTTTCTCATCATCGAAATGTCACCTGTTAC 1780
Query 1758 GGACATCGATACTAGTGGTATTCACGCCTTAGAAGACTTGTATAAGTCTCTCCA-AAAAC 1816
||||||||| || || ||||| ||||| ||||||||||| || ||||||||||| ||||
Sbjct 1781 GGACATCGACACAAGCGGTATCCACGCGTTAGAAGACTTATACAAGTCTCTCCAGAAAA- 1839
Query 1817 GAGACATTCAGTTGGTTCTAGCGAATCCAGGACCGCCGGTCATAAATAAGCTACATGTT- 1875
|||||||||||||| ||||||| ||||| |||||| ||| ||| |||||||| ||
Sbjct 1840 GAGACATTCAGTTGATTCTAGCAAATCCTGGACCGTTGGTGATAGGCAAGCTACAC-TTG 1898
Query 1876 TCTCACTTTGCGGACTTGATAGGACACGACAAAATCTTTCTGACGGTGGCTGAGGCCGTG 1935
|| |||||||| ||| || ||||||| ||||| |||| |||||| |||||||| |||||
Sbjct 1899 TCGCACTTTGCCGACATGTTAGGACAAGACAACATCTATCTGACAGTGGCTGACGCCGTC 1958
Query 1936 GATTCTTGCTCCCCTAAACTGTCCGACGAGGTCTGA 1971
|| |||||| || ||||| || || |||||||||
Sbjct 1959 GAGGCTTGCTGTCCAAAACTCTCAGAAGAGGTCTGA 1994
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74085526525
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5