BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G22340.1
Length=1464
Score E
Sequences producing significant alignments: (Bits) Value
Ahg335478 jgi|Araly1|335478|fgenesh1_pg.C_scaffold_1002043 2097 0.0
Ahg313123 jgi|Araly1|313123|fgenesh1_pm.C_scaffold_1001903 1092 0.0
Ahg472480 jgi|Araly1|472480|fgenesh2_kg.1__2434__AT1G22400.1 1059 0.0
Ahg913294 jgi|Araly1|913294|Al_scaffold_0001_3548 974 0.0
Ahg472476 jgi|Araly1|472476|fgenesh2_kg.1__2430__AT1G22360.2 957 0.0
Ahg313121 jgi|Araly1|313121|fgenesh1_pm.C_scaffold_1001901 736 0.0
> Ahg335478 jgi|Araly1|335478|fgenesh1_pg.C_scaffold_1002043
Length=1467
Score = 2097 bits (1135), Expect = 0.0
Identities = 1357/1465 (93%), Gaps = 12/1465 (1%)
Strand=Plus/Plus
Query 1 ATGGAATCTCATGTTGTTCATAACG-CACAAAAGCCACACGTAGTTTGCGTGCCTTACCC 59
|||||||||| |||||||| ||||| || |||| ||||||||||||||||||||||||||
Sbjct 1 ATGGAATCTCGTGTTGTTCTTAACGCCATAAAA-CCACACGTAGTTTGCGTGCCTTACCC 59
Query 60 GGCTCAAGGCCACATCAATCCGATGCTGAAAGTGGCTAAACTCCTCTACGCTAAAGGCTT 119
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 60 GGCTCAAGGCCACATCAATCCGATGCTGAAAGTGGCTAAACTTCTTTACGCTAAAGGCTT 119
Query 120 TCACGTCACCTTCGTTAACACTC-TCTACAACCACAACCGTCTCCTCCGGTCCCGTGGTC 178
| | ||||||||||| ||||| | |||||||||||||||||||||| ||||||||||| |
Sbjct 120 TTATGTCACCTTCGTCAACAC-CGTCTACAACCACAACCGTCTCCTACGGTCCCGTGGCC 178
Query 179 CCAACGCGCTCGACGGGTTTCCTTCATTCCGGTTCGAGTCCATCCCTGACGGTCTACCGG 238
||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||
Sbjct 179 CCAACGCGCTCGACGGGCTACGGTCATTCCGGTTCGAGTCCATCCCTGACGGCCTACCGG 238
Query 239 AGACTGATGGCGATAGGACGCAGCATACTCCTACCGTTTGCATGTCCATTGAGAAAAACT 298
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 239 AAACTGATGGCGATAGGACGCAGCATACTCCTACCGTTTGCGTGTCCATTGAGAAATACT 298
Query 299 GTCTCGCTCCATTCAAAGAGATTCTGC-GCCGGATCAACGATAAAGATGATGTTCCTCCA 357
|||||||||| ||||| ||| |||| | || |||||||||||| ||||||||||||||||
Sbjct 299 GTCTCGCTCCGTTCAAGGAGCTTCTCCTGC-GGATCAACGATAGAGATGATGTTCCTCCA 357
Query 358 GTGAGTTGTATTGTATCGGACGGTGTGATGAGTTTTACTCTTGACGCAGCCGAGGAACTA 417
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 358 GTGAGCTGTATTGTATCGGACGGTGTGATGAGTTTTACTCTTGACGCAGCGGAGGAGCTC 417
Query 418 GGTGTCCCAGAGGTTATTTTTTGGACCAATAGTGCTTGTGGTTTCATGACTATTCTACAC 477
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 418 GGTGTCCCAGAGATTATTTTTTGGACCAATAGTGCTTGTGGTTTCATGACTTTTCTACAC 477
Query 478 TTTTATCTTTTCATCGAGAAGGGTCTATCTCCTTTTAAAGACGAAAGTTACATGTC-AAA 536
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 478 TTTTATCTTTTCATCGAGAAGGGTCTATCTCCTTTTAAAGATGAAAGTTACATGTCTAAA 537
Query 537 GGAGCATCTAGACACAGTTATAGATTGGATACCATCAATGAAGAATCTTAGGTTAAAGGA 596
| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 538 G-AGCATCTAGACACAGTTGTAGATTGGATACCATCGATGAAGAATCTTAGGTTAAAGGA 596
Query 597 CATCCCTAGCTATATACGTACCACAAATCCTGACAACATAATGCTTAATTTCCTCATTCG 656
|||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 597 CATCCCTAGCTACATCCGTACCACAAATCCTGACAACATAATGCTAAATTTCCTCATTCG 656
Query 657 AGAAGTTGAGCGATCTAAACGCGCTAGTGCTATCATTCTCAACACGTTTGATGAACTCGA 716
||| || |||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct 657 AGAGGTCGAGCGATCCAAACGGGCCGGTGCTATCATTCTCAACACGTTTGATGAACTCGA 716
Query 717 GCATGATGTTATCCAGTCTATGCAATCTATTTTACCTCCGGTTTATTCTATTGGGCCACT 776
||||||||||||||||||||||||||||| | |||||||||||||||| ||||| || ||
Sbjct 717 GCATGATGTTATCCAGTCTATGCAATCTACTCTACCTCCGGTTTATTCGATTGGACCGCT 776
Query 777 CCATCTCCTTGTGAAGGAAGAAATAAACGAGGCTAGTGAAATAGGACAGATGGGATTAAA 836
||||||||||||||||| ||||| | || |||||||||||||||| ||||||||||||
Sbjct 777 TCATCTCCTTGTGAAGGAGGAAATCGATGAAGCTAGTGAAATAGGACGGATGGGATTAAA 836
Query 837 TTTGTGGAGAGAGGAGATGGAATGTTTGGATTGGCTCGATACAAAAACTCCAAACAGTGT 896
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||
Sbjct 837 TTTGTGGAGAGAGGAGACAGAATGTTTGGATTGGCTCGATACTAAAACTCCAAATAGCGT 896
Query 897 TCTTTTTGTTAACTTTGGATGCATAACGGTGATGAGTGCAAAACAGCTTGAAGAATTTGC 956
||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||
Sbjct 897 TCTTTTTGTTAACTTTGGATGCATAACGGTGTTGAGTGCAAAACAACTTGAAGAGTTTGC 956
Query 957 TTGGGGTTTGGCGGCAAGTAGGAAAGAGTTTTTATGGGTGATCCGTCCTAATTTAGTGGT 1016
||||||||||||||||||| |||||| |||||| ||||| ||||| ||||||||||||||
Sbjct 957 TTGGGGTTTGGCGGCAAGTGGGAAAGCGTTTTTGTGGGTTATCCGACCTAATTTAGTGGT 1016
Query 1017 GGGAGAGGCGATGGTGGTTCTTCCACAAGAGTTTTTAGCGGAGACGATAGACCGGAGAAT 1076
||||||||||||||||||||||| | |||||||||| ||||||| ||||||||||||||
Sbjct 1017 CGGAGAGGCGATGGTGGTTCTTCCGCCAGAGTTTTTAACGGAGACAATAGACCGGAGAAT 1076
Query 1077 GTTAGCT-AGTTGGTGTCCTCAGGAGAAAGTTCTTTCTCATCCCGCGATAGGAGGGTTCT 1135
||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1077 GTTAG-TGAGTTGGTGTCCTCAGGAGAAAGTTCTTTCTCATCCGGCGATCGGAGGGTTCT 1135
Query 1136 TGACGCATTGCGGGTGGAACTCAACATTGGAGAGTCTCGCTGGTGGTGTTCCGATGATAT 1195
|||| |||||||||||||| ||||| |||||||||||| | ||||||||||| |||||||
Sbjct 1136 TGACACATTGCGGGTGGAATTCAACGTTGGAGAGTCTCTCCGGTGGTGTTCCAATGATAT 1195
Query 1196 GTTGGCCATGTTTTTCGGAGCAACCGACGAATTGTAAGTTTTGTTGTGACGAGTGGGGAG 1255
||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1196 GTTGGCCGTGTTTTTCGGAACAACCGACGAATTGTAAGTTTTGTTGTGATGAGTGGGGAG 1255
Query 1256 TGGGTATAGAGATTGGTAAAGATGTGAAGAGAGAGGAGGTCGAGACGGTGGTTAGAGAAC 1315
||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 1256 TGGGTATAGAGATCGGTAGAGATGTGAAGAGAGAGGAGGTCGAGACGGTGGTTAGAGAGC 1315
Query 1316 TTATGGATGGAGAAAAGGGGAAAAAGCTGAGAGAAAAGGCGGAAGAGTGGCGGCGGTTGG 1375
||||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||| ||||
Sbjct 1316 TTATGGATGGAGAGAAGGGAAAAAAACTGAGAGAAAAGGCGGAAGAGTGGCAGCGATTGG 1375
Query 1376 CCGAGGAAGCGACGAGGTATAAACATGGTTCGTCGGTCATGAATCTTGAGACGCTTATAC 1435
||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||
Sbjct 1376 CCGAGGAAGCGACGAAGCATAAACTTGGTTCGTCGGTCATGAATTTTGAGACGCTTATAA 1435
Query 1436 ATAAAGTTTTCTTA-GAAAATCTTA 1459
|||||||||| ||| |||| |||||
Sbjct 1436 ATAAAGTTTTGTTAAGAAA-TCTTA 1459
> Ahg313123 jgi|Araly1|313123|fgenesh1_pm.C_scaffold_1001903
Length=1476
Score = 1092 bits (591), Expect = 0.0
Identities = 1200/1487 (81%), Gaps = 69/1487 (5%)
Strand=Plus/Plus
Query 1 ATGGAATCTCATGTTGTTCATAACGCACAAAAGCCACACGTAGTTTGCGTGCCTTACCCG 60
|||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||
Sbjct 1 ATGGGATCTCATGTTGTTTGTAACACACAAAAACCACACGTAGTTTGCGTGCCTTACCCG 60
Query 61 GCTCAAGGCCACATCAATCCGATGCTGAAAGTGGCTAAACTCCTCTACG-CTAAAGGCTT 119
||||||||||||||||| ||||||||||||||||||||||||||| ||| | | |||||
Sbjct 61 GCTCAAGGCCACATCAACCCGATGCTGAAAGTGGCTAAACTCCTCCACGTCCGA-GGCTT 119
Query 120 TCACGTCACCTTCGTTAACACTC-TCTACAACCACAACCGTCTCCTCCGGTCCCGTGGTC 178
|||||||||||||| ||||| | |||| |||||||||||||| ||| ||||||||||
Sbjct 120 CCACGTCACCTTCGTCAACAC-CGTCTATAACCACAACCGTCTACTCTGGTCCCGTGGGG 178
Query 179 CCAACGCGCTCGACGGGTTTCCTTCATTCCGGTTCGAGTCCATCCCTGACGGTCTACCGG 238
| ||||| ||||| || ||||||| ||||||||||||| ||| ||||| |||||||| |
Sbjct 179 CAAACGCACTCGATGGACTTCCTTCCTTCCGGTTCGAGTGCATACCTGATGGTCTACCTG 238
Query 239 AGACTGATG-GCGATAGG-ACGCAGCATACTCC-TACCGTTTGC-ATGTCCATTGA-GAA 293
||| || | | ||| | |||||| | | ||| | || ||||| | ||||| | |||
Sbjct 239 AGAATGGCGTG-GAT-GCCACGCAGGACA-TCCCTGCCCTTTGCGA-GTCCACA-ATGAA 293
Query 294 AAACTGTCTCGCTCCATTCAAAGA-GATTCTGC-GCCGGATCAACGATAAA-GATGATGT 350
||||||||||| ||||||||| || | |||| | || | || ||| | | || |||||
Sbjct 294 AAACTGTCTCGTTCCATTCAA-GAAGCTTCTCCAGCAG-ATTAAC-ACCAGTGAGGATGT 350
Query 351 TCCTCCAGTGAGTTGTATTGTATCGGACGGTGT-GATGAGTTTTACTCTTGACGCAGCCG 409
||||| ||||| ||||||||||| || ||| | |||||| ||||||||||||| || |
Sbjct 351 CCCTCCGGTGAGCTGTATTGTATCAGATGGT-TCGATGAGCTTTACTCTTGACGTTGCGG 409
Query 410 AGGAACTAGGTGTCCCAGAGGTTATTTTTTGGACCAATAGTGCTTGTGGTTTCATGACT- 468
| || || |||||||| |||||||||||||||||| |||||||||||| |||||| ||
Sbjct 410 AAGAGCTTGGTGTCCCGGAGGTTATTTTTTGGACCCCTAGTGCTTGTGGCTTCATGGCTT 469
Query 469 ATTCTACACTTTTATCTTTTCATCGAGAAGGGTCTATCTCCTTTTAAAGACGAAAGTTAC 528
|| |||||||||||||| ||||||||||||||| ||| ||| | ||||| || |||| |
Sbjct 470 AT-CTACACTTTTATCTCTTCATCGAGAAGGGTTTATGTCCAGTAAAAGATGAGAGTTGC 528
Query 529 ATGTCAAAGGAGCATCTAGACACAGTTATAGATTGGATACCATCAATGAAGAATCTTAGG 588
|| | |||||| | || ||||||||||||||||||||||| |||||||| ||||| |
Sbjct 529 TTGACGAAGGAGTACCTGGACACAGTTATAGATTGGATACCGTCAATGAAAAATCTAAAA 588
Query 589 TTAAAGGACATCCCTAGCTAT-ATACGTACCACAAATCCTGACAACATAATGCTTAATTT 647
||||| ||||| ||||| | | ||||||||||| |||||| || |||||||||| || ||
Sbjct 589 TTAAAAGACATTCCTAGTT-TCATACGTACCACTAATCCTAACGACATAATGCTCAACTT 647
Query 648 CCTCATTCGAGA-AGTTGAGCGATCTAAACGCGC-TAGTGCTATCATTCTCAACACGTTT 705
| | | || || | || ||| | |||||||| | |||||||||||||||||||||
Sbjct 648 CATTGTCCGTGAGACATGT-CGAGCCAAACGCGCCTC-TGCTATCATTCTCAACACGTTC 705
Query 706 GATGAACTCGAGCATGATGTTATCCAGTCTATGCAATCTATTTTACCTCCGGTTTATTCT 765
||||| ||||||| ||| |||||| |||||||||||| |||||||| ||||||||| |
Sbjct 706 GATGATCTCGAGCCTGACATTATCCGGTCTATGCAATCCATTTTACCACCGGTTTATCCA 765
Query 766 ATTGGGCCACTCCATCTCCTT-GTGAA--GGAAGAAATAAACGAGGCTAGTGAAATAGGA 822
||||| || || |||||| || || || || ||| | || || | |||||| || |||
Sbjct 766 ATTGGACCGCTTCATCTC-TTAGTAAACCGGGAGAT-TGAA-GAAGATAGTGAGATTGGA 822
Query 823 CAG-ATGGGATTAAATTTGTGGAGAGAGGAGA-TGGAATGTTTGGATTGGCTCGATACAA 880
|| ||||||| |||| | |||| |||| ||| || | ||||| |||||||||||||| |
Sbjct 823 -AGGATGGGATCAAATCTATGGAAAGAGAAGACTG-AGTGTTTTGATTGGCTCGATACTA 880
Query 881 AAACTCCAAACAGTGTTCTTTTTGTTAACTTTGG-ATGCATAACGGTGATGAGTGCAAAA 939
| ||||||| || || ||| |||||||||||| | ||||||| |||| | | |
Sbjct 881 AGGCTCCAAATAGCATTGTTTATGTTAACTTTGGGA-GCATAACAACAATGACCACGACA 939
Query 940 CAGCTTGAAGAATTTGCTTGGGGTTTGGCGGCAAGTAGGAAAG-AGTTTTTATGGGTGAT 998
||||||| || |||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 940 CAGCTTGTGGAGTTTGCTTGGGGTTTGGCGGCAAC-AGGAAAGGAGTTTTTATGGGTGAT 998
Query 999 CCGTCCTAATTTAGTGG-TGGGAGAGGCGATGGTGGTTCTTCCA-CAAGAGTTTTTAGCG 1056
|| || ||||||| | ||| ||||| | || || |||| || ||||||||||||
Sbjct 999 GCGGCCCGATTTAGTAGCTGG-AGAGG-G--GGCAGTGATTCCGTCA-GAGTTTTTAGCG 1053
Query 1057 GAGACGATAGACCGGAGAATGTT-AGCTAGTTGGTGTCCTCAGGAGAAAGTTCTTTCTCA 1115
||||| | || || || ||| | | | ||||||||||||||||||||||||||||||||
Sbjct 1054 GAGACAACCGATCGAAGGATGCTGA-CAAGTTGGTGTCCTCAGGAGAAAGTTCTTTCTCA 1112
Query 1116 TCCCGCGATAGGAGGGTTCTTGACGCATTGCGGGTGGAACTCAACATTGGAGAGTCTCGC 1175
||| ||||| ||||||||||||||||||||||||||||| || || || || ||||| |
Sbjct 1113 TCCAGCGATCGGAGGGTTCTTGACGCATTGCGGGTGGAATTCGACGTTAGAAAGTCTTTC 1172
Query 1176 -TGGTGGTGTTCCGATGATATGTTGGCCATGTTTTT-CGGAGCAACCGACGAATTGTAAG 1233
|| || ||||||||| | |||||||||| ||||| | ||||||| || |||||||||
Sbjct 1173 ATGC-GGAGTTCCGATGGTGTGTTGGCCAT-TTTTTGCTGAGCAACAAACAAATTGTAAG 1230
Query 1234 TTTTGTTGTGACGAGTGGGGAG-T-GGGTATAGAGATTGGTAAAGATGTGAAGAGAGAGG 1291
|||| |||||| || |||| || | ||| || ||||||||| |||||||||||| || |
Sbjct 1231 TTTTCTTGTGATGAATGGG-AGGTTGGG-ATTGAGATTGGTGGAGATGTGAAGAGGGAAG 1288
Query 1292 AGGTCGAGACGGTGGTTAGAGAACTTATGGATGGAGA-AAAGGGGAAAAAGCTGAGAGAA 1350
|||| ||| ||||||||||||| || ||||||||||| ||||| |||||| ||| ||||
Sbjct 1289 AGGTTGAGGCGGTGGTTAGAGAGCTCATGGATGGAGAGAAAGGA-AAAAAGATGAAAGAA 1347
Query 1351 AAGGCGGAAGAGTGGCGGCGGTTGGCCGAGGAAGCGAC-GAGGTATAAACATGGTTCGTC 1409
|||||||| ||||||| ||| ||||| ||| |||| || ||| | | | |||||||||
Sbjct 1348 AAGGCGGAGGAGTGGCAGCGTTTGGCGGAGAAAGCCACCGAGCT-TCCATGTGGTTCGTC 1406
Query 1410 GGTCATGAATCTTGAGACGCTTATACATA-AAGTTT-TCTTAGAAAA 1454
||| || ||| |||||||| || | || | ||| || |||||| |||
Sbjct 1407 GGTGATAAATTTTGAGACGATTGT-CA-ACAAGGTTCTCTTAGGAAA 1451
> Ahg472480 jgi|Araly1|472480|fgenesh2_kg.1__2434__AT1G22400.1
Length=1639
Score = 1059 bits (573), Expect = 0.0
Identities = 1180/1465 (81%), Gaps = 74/1465 (5%)
Strand=Plus/Plus
Query 1 ATGGAATCTCATG-TTGTTCATAACGCACAAAAGCCACACGTAGTTTGCGTGCCTTACCC 59
|||| |||||| | | ||||||||| ||||||| ||||| |||||||| || || || ||
Sbjct 13 ATGGGATCTCA-GATCGTTCATAACTCACAAAAACCACATGTAGTTTGTGTTCCATATCC 71
Query 60 GGCTCAAGGCCACATCAATCCGATGCTGAAAGTGGCTAAACTCCTCTACGCTAAAGGCTT 119
|||||||||||||||||| || ||| |||||||||||||||||||| |||||| ||||||
Sbjct 72 GGCTCAAGGCCACATCAACCCTATGATGAAAGTGGCTAAACTCCTCCACGCTAGAGGCTT 131
Query 120 TCACGTCACCTTCGTTAACACTC-TCTACAACCACAACCGTCTCCTCCGGTCCCGT-GGT 177
|||||||||||||| ||||| | ||||||||||||| ||| |||| || || ||| |||
Sbjct 132 CCACGTCACCTTCGTCAACAC-CGTCTACAACCACAATCGTTTCCTTCGTTCTCGTGGGT 190
Query 178 CCCAACGCGCTCGACGGGTTTCCTTCATTCCGGTTCGAGTCCATCCCTGACGGTCTACCG 237
| ||||| ||||| ||| ||||||| |||||||| |||||||| |||||||||||||||
Sbjct 191 -CTAACGCCCTCGAGGGGCTTCCTTCGTTCCGGTTTGAGTCCATTCCTGACGGTCTACCG 249
Query 238 GAGACTG--ATGGCGATAG-GACGCAGCATACTC-CTA-CCGTTTG-CATGTCCATTGA- 290
||||| | || | ||| | |||||| | | || | | || |||| | ||||| |
Sbjct 250 GAGACCGACAT-G-GAT-GCCACGCAGGACA-TCAC-AGCCCTTTGTGA-GTCCA-CCAT 302
Query 291 GAAAAACTGTCTCGCTCCATTCAAAGAGATTCTGC-GCCGGATCAACGATAAAGATGATG 349
||| |||||||||||||| |||| |||| || | | | |||||||||| |||| |||
Sbjct 303 GAAGAACTGTCTCGCTCCGTTCAGAGAGCTTGTCCAG-CGGATCAACGCCGGAGATAATG 361
Query 350 TTCCTCCAGTGAGTTGTATTGTATCGGACGG-TGTGATGAGTTTTACTCTTGACGCAGCC 408
||||||| ||||| ||||||||||| ||||| ||| ||||| ||||||||||||| ||
Sbjct 362 TTCCTCCGGTGAGCTGTATTGTATCCGACGGTTGT-ATGAGCTTTACTCTTGACGTTGCG 420
Query 409 GAGGAACTAGGTGTCCCAGAGGTTATTTTTTGGACCAATAGTGCTTGTG-GTTTCATGAC 467
||||| || || ||||| |||||| |||||||||| | |||| ||||| | ||| || |
Sbjct 421 GAGGAGCTTGGAGTCCCGGAGGTTCTTTTTTGGACGACCAGTGGTTGTGCG-TTCTTGGC 479
Query 468 -TATTCTACACTTTTATCT-TTTCATCGAGAAGGGTCTATCTCCTTTTAAAGACGAAAGT 525
|| ||||||||||||||| ||| |||||||||||| ||||||| | ||||| || |||
Sbjct 480 TTA-TCTACACTTTTATCTCTTT-ATCGAGAAGGGTTTATCTCCGCTAAAAGATGAGAGT 537
Query 526 TACATGTCAAAGGAGCATC-TAGAC-ACA--GTTATAGATTGGATACCATCAATGAAGAA 581
||| || | |||||| | | ||||| ||| |||||||||| |||||| | ||||||||
Sbjct 538 TACTTGACGAAGGAGTA-CTTAGACGACACGGTTATAGATTTTATACCAACCATGAAGAA 596
Query 582 TCTTAGGTTAAAGGACATCCCTAGCTAT-ATACGTACCACAAATCCTGACAACATAATGC 640
||| | |||| || || ||||||| | ||||||||||| |||||||| | | |||
Sbjct 597 TCTCAAACTAAAAGATATTCCTAGCT-TCATACGTACCACTAATCCTGATGATGTTATGA 655
Query 641 TTAATTTC-CTCATTCGAGAAG-TTGAGCGATCTAAACGCGCTAGTGCTATCATTCTCAA 698
|||||||| | | | || | || |||||| | ||||| ||| |||||||||||| ||
Sbjct 656 TTAATTTCGC-CCTCCGCG-AGACCGAGCGAGCCAAACGTGCTTCTGCTATCATTCTAAA 713
Query 699 CACGTTTGATGAACTCGAGCATGATGTTATCCAGTCTATGCAATCTATTTTACCTCCGGT 758
||| |||||||| || |||||||||||| | ||| ||||||| || ||||||||||||||
Sbjct 714 CACATTTGATGACCTTGAGCATGATGTTGTTCAGGCTATGCAGTCCATTTTACCTCCGGT 773
Query 759 TTATTCTA-TTGGGCCACTCCATCTCCTT-GTGAA--GGAAGAAATAAACG-AGGCTAGT 813
|||||| | |||| || || ||||| ||| | || || || | | || | ||| ||||
Sbjct 774 TTATTC-AGTTGGACCGCTTCATCT-CTTAGCAAACCGGGAG-ATTGAA-GAAGG-TAGT 828
Query 814 GAAATAGGACA-GATGGGATT-AAATTTGTGGAGAGAGGAGATGGAATGTTTGGATTGGC 871
|| || ||| | |||| | || ||||| |||| ||||||||||||||||||||||||||
Sbjct 829 GAGATTGGA-ATGATGAG-TTCGAATTTATGGAAAGAGGAGATGGAATGTTTGGATTGGC 886
Query 872 TCGATACAAAAACTCCAAACAGTGTTCTTTTTGTTAACTTT-GGATGCATAACGGTGATG 930
| ||||| || ||| ||||||||| ||| |||||||| ||| |||||||||| ||
Sbjct 887 TTGATACTAAGACTAAAAACAGTGTAATTTACATTAACTTTGGGA-GCATAACGGTTTTG 945
Query 931 AGTGCAAAACAGCTTGAAGAATTTGCTTGGGGTTTGGCGGCAAGTAGGAAAGAGTTTTTA 990
|||| || ||||||| || ||||||||||||||||||| |||| ||||||||||||||
Sbjct 946 AGTGTGAAGCAGCTTGTGGAGTTTGCTTGGGGTTTGGCGGGAAGTGGGAAAGAGTTTTTA 1005
Query 991 TGGGTGATCCGTCCTAATTTAGT-GGTGGGAGAGGCGATGGTGGTTCTTCCACAAGAGTT 1049
|||||||| || || ||||||| | | ||||| | || || | |||||| |||||
Sbjct 1006 TGGGTGATTCGGCCGGATTTAGTAGCT-GGAGA-G-GA-GGCAATGGTTCCACCGGAGTT 1061
Query 1050 TTTAGCGGAGACGATAGACCGGAGAATGTTAGCTAGTTGGTGTCCTCAGGAGAAAGTTCT 1109
|||| ||||||| | ||||||||| ||| |||| ||||||||||||||||||||||||||
Sbjct 1062 TTTAACGGAGACCAAAGACCGGAGTATGCTAGCGAGTTGGTGTCCTCAGGAGAAAGTTCT 1121
Query 1110 TTCTCATCCCGCGATAGGAGGGTTCTTGACGCATTGCGGGTGGAACTCAACATTGGAGAG 1169
||||||||| ||||| |||||||||||||||||||||||||||||||| | ||| || ||
Sbjct 1122 TTCTCATCCGGCGATTGGAGGGTTCTTGACGCATTGCGGGTGGAACTCGATATTAGAAAG 1181
Query 1170 TCTCGCTGGTGGTGTTCCGATGATATGTTGGCCATGTTTTT-CGGAGCAACCGACGAATT 1228
||| | |||| ||||| ||| | |||||||||| ||||| | || |||| | |||||
Sbjct 1182 TCTTTCAAGTGGAGTTCCAATGGTGTGTTGGCCAT-TTTTTGCTGACCAACAAATGAATT 1240
Query 1229 GTAAGTTTTGTTGTGACGAGTGGGGA-GT-GGGTATAGAGATTGGTAAAGATGTGAAGAG 1286
|||||| ||||||||||||||||| | || ||| || ||||| ||| ||||||||||||
Sbjct 1241 GTAAGTATTGTTGTGACGAGTGGG-ATGTTGGG-ATTGAGATAGGTGGAGATGTGAAGAG 1298
Query 1287 AGAGGAGGTCGAGACGGTGGTTAGAGAACTTATGGATGGAGA-AAAGGGGAAAAAGCTGA 1345
||| || || ||||||||||||||||| || ||||||||||| ||||| ||||| |||
Sbjct 1299 AGAAGAAGTTGAGACGGTGGTTAGAGAGCTCATGGATGGAGATAAAGGAAAAAAAA-TGA 1357
Query 1346 GAGAAAAGGCGGAAGAGTGGCGGCGGTTGGCC-GAGGAAGCGAC-GAGGTATAAACATGG 1403
|| | |||||| |||||||| ||| ||||| | ||| ||||| ||| |||||| |||
Sbjct 1358 GACAGAAGGCGCTAGAGTGGCAGCGCTTGGCTAGGGGA-GCGACAGAGC-ATAAACTTGG 1415
Query 1404 TTCGTCGGTCATGAATCTTGAGACG 1428
||| || || ||||| ||||||||
Sbjct 1416 TTCCTCCGTGGTGAATTTTGAGACG 1440
> Ahg913294 jgi|Araly1|913294|Al_scaffold_0001_3548
Length=1467
Score = 974 bits (527), Expect = 0.0
Identities = 1162/1461 (80%), Gaps = 73/1461 (5%)
Strand=Plus/Plus
Query 1 ATGGAATCTCATGTTGTTCATAACGCACAAAAGCCACACGTAGTTTGCGTGCCTTACCCG 60
|||| || |||||| |||| |||||||||||| |||||||||||||| || || || |||
Sbjct 1 ATGGGATATCATGTCGTTCGTAACGCACAAAAACCACACGTAGTTTGTGTTCCCTATCCG 60
Query 61 GCTCAAGGCCACATCAATCCGATGCTGAAAGTGGCTAAACTCCTCTACGCT-AAAGGCTT 119
||||||||||||||||| || ||| ||||||| |||||||||||||||| | | ||||||
Sbjct 61 GCTCAAGGCCACATCAACCCTATGATGAAAGTAGCTAAACTCCTCTACG-TCAGAGGCTT 119
Query 120 TCACGTCACCTTCGTTAACACTC-TCTACAACCACAACCGTCTCCTCCGGTCCCGT-GGT 177
||||||||||||||| ||||| | |||||||||| |||||| |||| ||||| | |||
Sbjct 120 TCACGTCACCTTCGTCAACAC-CGTCTACAACCATAACCGTTTCCTTTGGTCCTATGGGT 178
Query 178 CCCAACGCGCTCGACGGGTTTCCTTCATTCCGGTTCGAGTCCATCCCTGACGGTCTACCG 237
| ||||| || |||||| |||| || |||||||| |||||||| ||||||||||| ||
Sbjct 179 -CGAACGCCCTTGACGGGCTTCCGTCGTTCCGGTTTGAGTCCATTCCTGACGGTCTGCCA 237
Query 238 GAGACTGAT-GGCGATAGGACGCAGCATACTC-CTA-CCGTTTGC-ATGTCCATTGA-GA 292
||||| ||| | || | || ||| | | || | | || ||||| | ||||| | ||
Sbjct 238 GAGACCGATATG-GACACCACACAGGACA-TCACAATCC-TTTGCGA-GTCCA-CCATGA 292
Query 293 AAAACTGTCTCGCTCCATTCAAAG-AGATTCTGCGCCGGATCAACGATAAAGATGATGTT 351
| |||||||||||||| || ||| | |||| | || ||||| | | |||| |||||
Sbjct 293 ACAACTGTCTCGCTCCGTT-TAAGAACCTTCTCCAACGAATCAATGCCAGAGATAATGTT 351
Query 352 CCTCCAGTGAGTTGTATTGTATCGGAC-GGTGTGATGAGTTTTACTCTTGACGCAGCCGA 410
||||| |||||||| |||||||| ||| | ||| ||||| ||||||||||| | || ||
Sbjct 352 CCTCCTGTGAGTTGCATTGTATCTGACAGTTGT-ATGAGCTTTACTCTTGATGTTGCGGA 410
Query 411 GGAACTAGGTGTCCCAGAGGTTATTTTTTGGACCAA-TAGTGCTTGTGGTTTCATGAC-T 468
||| || || ||||| | |||| |||| ||| ||| |||||||||| ||| || | |
Sbjct 411 GGAGCTTGGAGTCCCGGGGGTTCTTTTGCGGA-CAACCAGTGCTTGTGCATTCTTGGCTT 469
Query 469 ATTCTACACTTTTATCTTTTCATCGAGAAGGGTCTATCTCCTTTTAAAGACGAAAGTTAC 528
| ||||||||||||||| ||||||||||||||| ||||||| | ||||| || ||||||
Sbjct 470 A-TCTACACTTTTATCTCTTCATCGAGAAGGGTTTATCTCCCCTAAAAGATGAGAGTTAC 528
Query 529 ATGTCAAAGGAGCATC-TAGACACAGTTATAGATTGGATACCATCAATGAAGAATCTTAG 587
|| | |||||| | | | |||| |||||||||| ||||| || ||||||||||| |
Sbjct 529 TTGACGAAGGAGTA-CTTTGACATTGTTATAGATTTTATACCGTCGATGAAGAATCTAAA 587
Query 588 GTTAAAGGACATCCCTAGCTAT-ATACGTACCACAAATCCTGACAACATAATGCTT-AA- 644
||||||| || ||||||| | ||||||||||| |||||| | | | |||||| ||
Sbjct 588 ACTAAAGGATATTCCTAGCT-TCATACGTACCACTAATCCTAATGATGTTATGCTTAAAC 646
Query 645 T-TTCCTCATTCGAGAAGTTGAGCGATCTAAACGCGCTAGTGCTATCATTCTCAACACGT 703
| |||| ||||| | | |||| ||||||| ||| ||||||||| | || | |
Sbjct 647 TCGCCCTC-CGCGAGACG--GCGCGAGCTAAACGTGCTTCTGCTATCATGGTAAATTCAT 703
Query 704 TTGATGAACTCGAGCATGATGTTATCCAGTCTATGCAATCTATTTTACCTCCGGTTTATT 763
||||||| || |||||||| ||||| ||| ||||| |||| ||||||||||| |||||||
Sbjct 704 TTGATGACCTTGAGCATGACGTTATTCAGGCTATGAAATCCATTTTACCTCCAGTTTATT 763
Query 764 CTATTGGGCCACTCCATCTCCTT-GTGAA--GGAAGAAAT-AAACG-AGGCTAGTGAAAT 818
| ||||| ||||| ||||| ||| | || || || || || | | | ||||| ||
Sbjct 764 CAATTGGACCACTTCATCT-CTTAGCAAACCGG--GAGATCGAA-GAAAG-TAGTGGTAT 818
Query 819 AGGACA-GATGGGATT-AAATTTGTGGAGAGAGGAGATGGAATGTTTGGATTGGCTCGAT 876
||| | ||| | ||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 819 TGGA-ATGAT-GAATTCGAATTTGTGGAAAGAGGAGATGGAATGTTTGGATTGGCTCGAT 876
Query 877 ACAAAAACTCCAAACAGTGTTC-TTTTTGTTAACTTT-GGATGCATAACGGTGATGAGTG 934
|| || |||| |||||||| || ||| | |||||||| ||| |||||||||| ||||||
Sbjct 877 ACTAAGACTCAAAACAGTG-TCATTTATATTAACTTTGGGA-GCATAACGGTTTTGAGTG 934
Query 935 CAAAACAGCTTGAAGAATTTGCTTGGGGTTTGGC-GGCAAGTAGG-AAAGAGTTTTTATG 992
| || ||||||| || ||| ||||||||||||| || |||| || ||||| ||||| ||
Sbjct 935 CGAAGCAGCTTGTCGAGTTTTCTTGGGGTTTGGCAGG-AAGT-GGTAAAGATTTTTTGTG 992
Query 993 GGTGATCCGTCCTA-ATTTAGTGGTGGGAGAGGCGATGGTGGTTCTTCCACAAGAGTTTT 1051
||||||||| || | ||||||||| | | || || || | | |||||| ||||||||
Sbjct 993 GGTGATCCGACC-AGATTTAGTGG-CCG-G-GGAGAAGGCGCTGGTTCCACCAGAGTTTT 1048
Query 1052 TAGCGGAGACGATAGACCGGAGAATGTTAG-CTAGTTGGTGTCCTCAGGAGAAAGTTCTT 1110
|| |||||| | | |||| || ||||| | | |||||||||||||||||||||||||||
Sbjct 1049 TAAAGGAGACCACAAACCGAAGTATGTT-GCCGAGTTGGTGTCCTCAGGAGAAAGTTCTT 1107
Query 1111 TCTCATCCCGCGATAGGAGGGTTCTTGACGCATTGCGGGTGGAACTCAACAT-TGGAGAG 1169
|||||||| || || |||||||||||||| |||||||| |||||||| | | | || ||
Sbjct 1108 TCTCATCCAGCAATCGGAGGGTTCTTGACTCATTGCGGATGGAACTCGAT-TCTAGAAAG 1166
Query 1170 TCTCGCTGGTGGTGTTCCGATGATATGTTGGCCATGTTTTTCGGAGCAACCGACGAATTG 1229
| || | ||||| ||||| ||| | |||||||||| |||| | || |||| || |||||
Sbjct 1167 TATCTCGGGTGGAGTTCCAATGGTGTGTTGGCCATATTTTGCTGACCAACAAACAAATTG 1226
Query 1230 TAAGTTTTGTTGTGACGAGTGGGGAG-TGGGTATAGAGATTGGTAAAGATGTGAAGAGAG 1288
||||||||||||||| || |||| || |||| || ||||| ||| ||||||||||||||
Sbjct 1227 TAAGTTTTGTTGTGATGAATGGG-AGGTGGGAATTGAGATCGGTGGAGATGTGAAGAGAG 1285
Query 1289 AGGAGGTCGAGACGGTGGTTAGAGAACTTATGGATGGAGAAAAGGGGAA-AAAGCTGAGA 1347
||||||| ||| |||| |||||||| || ||||||||||||||||| || ||| |||||
Sbjct 1286 AGGAGGTTGAGGCGGTTGTTAGAGAGCTCATGGATGGAGAAAAGGGAAAGAAAA-TGAGA 1344
Query 1348 GAAAAGGCGGAAGAGTGGCGGCGGTTGGCCGAGGAAGCGACG-AGGTATAAACATGGTTC 1406
|| |||||||||||||||||||| |||| |||| ||||||| || |||||||||||||
Sbjct 1345 GAGAAGGCGGAAGAGTGGCGGCGATTGGGGGAGGCAGCGACGGAGC-ATAAACATGGTTC 1403
Query 1407 GTCGG-TCATGAATCTTGAGA 1426
|| | | |||||| ||||||
Sbjct 1404 CTCAGCT-ATGAATTTTGAGA 1423
> Ahg472476 jgi|Araly1|472476|fgenesh2_kg.1__2430__AT1G22360.2
Length=1480
Score = 957 bits (518), Expect = 0.0
Identities = 1040/1285 (81%), Gaps = 63/1285 (5%)
Strand=Plus/Plus
Query 28 CAAAAGCCACACGTAGTTTGCGTGCCTTACCCGGCTCAAGGCCACATCAATCCGATGCTG 87
||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| ||
Sbjct 82 CAAAAACCACACGTAGTTTGCGTGCCTTATCCGGCTCAAGGCCACATCAACCCTATGATG 141
Query 88 AAAGTGGCTAAACTCCTCTACGCTAAAGGCTTTCACGTCACCTTCGTTAACACTC-TCTA 146
||||||||||||||||| |||||||||||||| || || |||||||| ||||| | ||||
Sbjct 142 AAAGTGGCTAAACTCCTTTACGCTAAAGGCTTCCATGTTACCTTCGTCAACAC-CGTCTA 200
Query 147 CAACCACAACCGTCTCCTCCGGTCCCGT-GGTCCCAACG-CGCTCGACGGGTTTCCTTCA 204
||||||||||||||| |||||||||||| ||| | |||| || |||||||| |||||||
Sbjct 201 CAACCACAACCGTCTACTCCGGTCCCGTGGGT-CTAACGCCG-TCGACGGGCTTCCTTCT 258
Query 205 TTCCGGTTCGAGTCCATCCCTGACGGTCTACCGGAGACTGATG-GCGATAGG-ACGCAGC 262
|||||||| |||||||||||||||||||||||||||||||||| | || | || |||
Sbjct 259 TTCCGGTTTGAGTCCATCCCTGACGGTCTACCGGAGACTGATGTG-GAC-GTCACTCAGG 316
Query 263 ATACTCC-TAC-CGTTTGC-ATGTCCATTGA-GAAAAACTGTCTCGCTCCATTCAAAGAG 318
| | ||| ||| | ||||| | ||||| | ||| ||||||||||||| ||||| |||
Sbjct 317 ACA-TCCCTACTC-TTTGCGA-GTCCACA-ATGAAGCACTGTCTCGCTCCGTTCAAGGAG 372
Query 319 ATTCTGC-GCCGGATCAACGATAAAGATGATGTTCCTCCAGTGAGTTGTATTGTATCGGA 377
|||| | | | || ||||| |||||||||||||| ||||| ||||| |||| ||
Sbjct 373 CTTCT-CAGGCAGACCAACGCCGGGGATGATGTTCCTCCGGTGAGCTGTATCATATCCGA 431
Query 378 CGGT-GTGATGAGTTTTACTCTTGACGCAGCCGAGGAACTAGGTGTCCCAGAGGTTATTT 436
|||| || ||||| || || ||||| || || ||||| || |||||||| |||||| |||
Sbjct 432 CGGTTGT-ATGAGCTTCACACTTGATGCTGCGGAGGAGCTCGGTGTCCCGGAGGTTCTTT 490
Query 437 TTTGGACCAAT-AGTGCTTGTGGTTTCATGACT-ATTCTACACTTTTATCTTTTCATCGA 494
||||||| || ||||||||||| ||| || || || || ||| |||| ||||||||
Sbjct 491 TTTGGAC-AACCAGTGCTTGTGGCTTCTTGGCTTAT-CTTTACTACTATCGCTTCATCGA 548
Query 495 GAAGGG-TCTATCTCCTTTTAAAGACGAAAGTTACATGT-CAAAGGAGCATCT-AGACAC 551
|||||| | |||| || | ||||| ||||||||| || ||| ||| || || ||||||
Sbjct 549 GAAGGGAT-TATCGCCGATAAAAGATGAAAGTTACTTGAACAA-GGAACA-CTTAGACAC 605
Query 552 AGTTATAGATTGGATACCATCAATGAAGAATCTTAGGTTAAAGGACATCCCTAGCTAT-A 610
| ||||||||||||||||| |||||||| || || |||| ||||||||||||| | |
Sbjct 606 AAAAATAGATTGGATACCATCGATGAAGAACCTAAGACTAAAAGACATCCCTAGCT-TCA 664
Query 611 TACGTACCACAAATCCTGACAACATAATGCTTAA-TTTCCTCATTCGAGAAGTTGAGCGA 669
| || || || ||||||||| |||| ||||| || ||| |||| || || | ||| |||
Sbjct 665 TCCGAACAACTAATCCTGACGACATCATGCTCAACTTTA-TCATCCGTGAGGCTGACCGA 723
Query 670 TCTAAACGCGCTAGTGCTATCATTCTCAACACGTTTGATGAACTCGAGCATGATGTTATC 729
| ||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct 724 GCCAAACGCGCTTCAGCTATCATTCTCAACACGTTTGATGATCTCGAACATGACGTTATC 783
Query 730 CAGTCTATGCAATCTATTTTACCTCCGGTTTATTCTATTGGGCCACTCCATCTCCTTGTG 789
|| ||||||||||||||| ||||||||||||| |||||||| || || ||| | || | |
Sbjct 784 CAATCTATGCAATCTATTGTACCTCCGGTTTACTCTATTGGACCGCTACATTTACTAGAG 843
Query 790 AAGGAAGAAATAAACGAGGCTAGTGAAATAGGACAGATGGGATTAAATTTGTGGAGAGAG 849
|| |||| || | |||| |||||| || ||| |||||||| ||||||||||||||
Sbjct 844 AAACAAGAGATCAGTGAGGATAGTGAGATCCGACGGATGGGATCGAATTTGTGGAGAGAA 903
Query 850 GAGA-TGGAATGTTTGGATTGGCTCGATACAAAAACTCCAAACAGTGTTCTTTTTGTTAA 908
|||| || | |||||||||||||| |||| ||| ||||| |||||||| | | ||||||
Sbjct 904 GAGACTG-AGTGTTTGGATTGGCTAAATACTAAAGCTCCAGACAGTGTTGTGTATGTTAA 962
Query 909 CTTTGG-ATGCATAACGGTGATGAGTGCAAAACAGCTTGAAGAATTTGCTTGGGGTTTGG 967
|||||| | | ||||| ||| |||| || |||||||||| || ||||| ||||||||||
Sbjct 963 CTTTGGGA-GTATAACTGTGTTGAGCGCTAAACAGCTTGTGGAGTTTGCATGGGGTTTGG 1021
Query 968 CGGCAA-GTAGGAAAGAGTTTTTATGGGTGATCCGTCCTA-ATTTAGTGGT-GGG-A-GA 1022
| |||| | ||||||||||||| |||||||||||||| | ||||||| | ||| | ||
Sbjct 1022 CAGCAACGG-GGAAAGAGTTTTTGTGGGTGATCCGTCC-AGATTTAGTAGCCGGGGATGA 1079
Query 1023 GGCGATGGTGGTTCTTCCACAAGAGTTTTTAGCGGAGACGATAG-ACCGGAGAATGTTAG 1081
||| ||||| | | | || ||||||||| |||| || | | ||||||| |||||||
Sbjct 1080 GGCAATGGT--T-C--C-ACCGGAGTTTTTAACGGAAAC-AGCGGACCGGAGGATGTTAG 1132
Query 1082 CTAGTTGGTGTCCTCAGGAGAAAGTTCTTTCTCATCCCG-CGATAGGAGGGTTCTTGACG 1140
| |||||||||||||| |||||||| ||||| || |||| |||| |||||||||||||||
Sbjct 1133 CAAGTTGGTGTCCTCAAGAGAAAGTCCTTTCCCA-CCCGGCGATTGGAGGGTTCTTGACG 1191
Query 1141 CATTGCGGGTGGAACTCAACATTGGAGAGTCTC-GCTGGTGGTGTTCCGATGATATGTTG 1199
||||||||||||||||| || ||||| ||||| | ||| || ||||||||| | |||||
Sbjct 1192 CATTGCGGGTGGAACTCGACGTTGGAAAGTCTATG-TGGCGGAGTTCCGATGGTGTGTTG 1250
Query 1200 GCCATGTTTTT-CGGAGCAACCGACGAATTGTAAGTTTTGTTGTGACGAGTGGGGAG-TG 1257
||| | | ||| | ||||||| || ||||||||||||| | |||| || |||| || ||
Sbjct 1251 GCCCT-TCTTTGCAGAGCAACAAACAAATTGTAAGTTTTCTCGTGATGAATGGG-AGGTG 1308
Query 1258 GGTATAGAGATTGGTAAAGATGTGA 1282
|| || ||||| || ||||||||
Sbjct 1309 GGGATTGAGATAGGCGGAGATGTGA 1333
> Ahg313121 jgi|Araly1|313121|fgenesh1_pm.C_scaffold_1001901
Length=1281
Score = 736 bits (398), Expect = 0.0
Identities = 661/785 (84%), Gaps = 29/785 (4%)
Strand=Plus/Plus
Query 660 AGTTGAGCGATCTAAACGCGCTAGTGCTATCATTCTCAACACGTTTGATGAACTCGAGCA 719
||| |||| ||| |||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct 480 AGTGGAGCAATCGAAACGCGCTAGTGCTATCATTCTCAATACGTTTGATGATCTCGATCA 539
Query 720 TGATGTTATCCAGTCTATGCAA--TC-TATTTTACCTCCGGTTTATTCTATTGGGCCACT 776
|||| |||| || ||||||||| || | ||||||| ||||||||||| ||||| || ||
Sbjct 540 TGATCTTATACAATCTATGCAATCTCTTTTTTTACCCCCGGTTTATTCGATTGGACCGCT 599
Query 777 CCATCTCCTTGTGAAGGAA-GAAATAAACGAGGCTAGTGAAATAGGACAGATGGGATTAA 835
||||||||| ||||| || ||||| | |||| |||||||||||||| |||||||||||
Sbjct 600 CCATCTCCTAGTGAA-CAATGAAATTGATGAGGTTAGTGAAATAGGACGGATGGGATTAA 658
Query 836 ATTTGTGGAGAGAGGAGATGGAATGTTTGGATTGGCTCGA-TACAA-A-AACTCCAAACA 892
||||||||| ||| |||| ||||||||||||||| | || | || | |||||||||||
Sbjct 659 ATTTGTGGAAAGAAGAGACAGAATGTTTGGATTGGTTGGACAATAAGACAACTCCAAACA 718
Query 893 GTGTTC-TTTTTGTTAACTTTGGATGCATAACGGTGATGAGTGCAAAACAGCTTGAAGAA 951
| | || |||||||||| ||||||||||||||||||||||||||||||| ||||| ||
Sbjct 719 GCG-TCGTTTTTGTTAATTTTGGATGCATAACGGTGATGAGTGCAAAACTGCTTGTTGAG 777
Query 952 TTTGCTTGGGGTTTGGCGGCAAGTAGG-AAAGAGTTTTTATGGGTGATCCGTCCTAATTT 1010
|||||||||||||||||||||||| || |||| |||||||||||||||||| || ||||
Sbjct 778 TTTGCTTGGGGTTTGGCGGCAAGT-GGAAAAGCGTTTTTATGGGTGATCCGGCCGGATTT 836
Query 1011 AGTGGTGGGAGAGGCGATGGTGGTTCTTCCACAAGAGTTTTTAGCGGAGACGATAGACCG 1070
||| | |||||| |||| ||| ||| | | |||||||||| |||||||| |||||||
Sbjct 837 AGTTGCCGGAGAGACGATCGTGATTC-T-GTC-AGAGTTTTTAACGGAGACGGTAGACCG 893
Query 1071 GAGAATGTTAGCT-AGTTGGTGTCCTCAGGAGAAAGTTCTTTCTCATCCC-GCGATAGGA 1128
| ||||| | | | ||||||||||||||||| ||||| ||||| || ||| | | |||
Sbjct 894 GGGAATGCT-GGTGAGTTGGTGTCCTCAGGAAAAAGTCCTTTCCCA-CCCAATGGTTGGA 951
Query 1129 GGGTTCTTGACGCATTGCGGGTGGAACTCAACATTGGAGAGTCTCGCTGGTGGTGTTCCG 1188
||||||||||||||||||||||||||||| ||| | || ||| | | ||||||||||||
Sbjct 952 GGGTTCTTGACGCATTGCGGGTGGAACTCGACACTCGAAAGTATTTCCGGTGGTGTTCCG 1011
Query 1189 ATGATATGTTGGCCATGTTTTT-CGGAGCAACCGACGAATTGTAAGTTTTGTTGTGACGA 1247
|||||||||||||| | ||||| ||||||| | ||| ||||||||||| |||||||| ||
Sbjct 1012 ATGATATGTTGGCCGT-TTTTTGCGGAGCAGCAGACAAATTGTAAGTTCTGTTGTGATGA 1070
Query 1248 GTGGGGAGTGGGTATAGAGATTGGTAAAGATGTGAAGAGAGAGGAGGTCGAGACGGTGGT 1307
||||||||| ||||| ||||||||| |||||| ||||| ||||||||||||| ||||||
Sbjct 1071 GTGGGGAGTTGGTATCGAGATTGGTGGAGATGTTAAGAGGGAGGAGGTCGAGATGGTGGT 1130
Query 1308 TAGAGAACTTATGGATGGAGAAAAGGGGAA-AAAGCTGAGAGAAAAGGCGGAAGAGTGGC 1366
|||||| || ||||||||||| ||||| || ||| ||||||| ||||||| ||||||||
Sbjct 1131 TAGAGAGCTCATGGATGGAGAGAAGGGAAAGAAAA-TGAGAGAGAAGGCGGTAGAGTGGC 1189
Query 1367 GGCGGTTGGCCGAG-GAAGCGACG-AGGTATAAACATGGTTCGTCGGT-CATGAATCTTG 1423
|||| ||||| || ||||| ||| || |||| |||||||| ||| | | ||||| |||
Sbjct 1190 GGCGCTTGGC-GAATGAAGCAACGGAGC-ATAAGCATGGTTCCTCGTTTC-TGAATTTTG 1246
Query 1424 AGACG 1428
|||||
Sbjct 1247 AGACG 1251
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54773772310
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5