BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G22350.1
Length=1621
Score E
Sequences producing significant alignments: (Bits) Value
Ahg313121 jgi|Araly1|313121|fgenesh1_pm.C_scaffold_1001901 1173 0.0
Ahg335478 jgi|Araly1|335478|fgenesh1_pg.C_scaffold_1002043 900 0.0
Ahg472480 jgi|Araly1|472480|fgenesh2_kg.1__2434__AT1G22400.1 634 0.0
Ahg313123 jgi|Araly1|313123|fgenesh1_pm.C_scaffold_1001903 621 5e-177
Ahg472476 jgi|Araly1|472476|fgenesh2_kg.1__2430__AT1G22360.2 536 2e-151
Ahg472478 jgi|Araly1|472478|fgenesh2_kg.1__2432__AT1G22370.2 399 2e-110
> Ahg313121 jgi|Araly1|313121|fgenesh1_pm.C_scaffold_1001901
Length=1281
Score = 1173 bits (635), Expect = 0.0
Identities = 747/802 (93%), Gaps = 4/802 (0%)
Strand=Plus/Plus
Query 823 GTGGAGCAATCCAAACGCGCCAGTG--ATCATTCTCAATACGTTCGATGATCTTGATCAT 880
||||||||||| |||||||| |||| ||||||||||||||||| |||||||| ||||||
Sbjct 481 GTGGAGCAATCGAAACGCGCTAGTGCTATCATTCTCAATACGTTTGATGATCTCGATCAT 540
Query 881 GATCTTATACAATCTATGCAATCTATTTTATTACCTCCGGTTTATACGATTGGACCGCTC 940
|||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||
Sbjct 541 GATCTTATACAATCTATGCAATCTCTTTTTTTACCCCCGGTTTATTCGATTGGACCGCTC 600
Query 941 CATCTCCTAGCAAACCAGGAAATTGACGAGGTTAGTGAAATAGGACGGATGGGATTAAAT 1000
|||||||||| ||| | |||||||| |||||||||||||||||||||||||||||||||
Sbjct 601 CATCTCCTAGTGAACAATGAAATTGATGAGGTTAGTGAAATAGGACGGATGGGATTAAAT 660
Query 1001 TTGTGGAAAGAAGATACAGAATGTTTGGATTGGTTGGACAGTAAAACGACTCCAAACAGC 1060
|||||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct 661 TTGTGGAAAGAAGAGACAGAATGTTTGGATTGGTTGGACAATAAGACAACTCCAAACAGC 720
Query 1061 GTCGTTTTTGTTAATTTTGGATGCATAACGGTGATGAGTGCAAAACAACTTCTTGAGTTT 1120
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 721 GTCGTTTTTGTTAATTTTGGATGCATAACGGTGATGAGTGCAAAACTGCTTGTTGAGTTT 780
Query 1121 GCTTGGGGTTTGGCGGCAAGTGGGAAAGAGTTTTTATGGGTGATCCGGCCGGATTTAGTT 1180
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 781 GCTTGGGGTTTGGCGGCAAGTGGAAAAGCGTTTTTATGGGTGATCCGGCCGGATTTAGTT 840
Query 1181 GCCGGAGAGACGA-CGGCGATTCTCTCAGAGTTTTTAACGGAGACGGCAGACCGCGGAAT 1239
||||||||||||| || |||||| |||||||||||||||||||||| |||||| |||||
Sbjct 841 GCCGGAGAGACGATCGT-GATTCTGTCAGAGTTTTTAACGGAGACGGTAGACCGGGGAAT 899
Query 1240 GCTGGTGAGTTGGTGTTCTCAAGAAAAAGTTATTTCCCACCCTATGGTTGGAGGGTTCTT 1299
|||||||||||||||| |||| |||||||| |||||||||| |||||||||||||||||
Sbjct 900 GCTGGTGAGTTGGTGTCCTCAGGAAAAAGTCCTTTCCCACCCAATGGTTGGAGGGTTCTT 959
Query 1300 GACGCATTGCGGGTGGAACTCGACACTCGAAAGTATCTCTGGTGGTGTTCCGATAATATG 1359
|||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct 960 GACGCATTGCGGGTGGAACTCGACACTCGAAAGTATTTCCGGTGGTGTTCCGATGATATG 1019
Query 1360 CTGGCCGTTTTTTGCCGAGCAGCAAACGAATTGTAAGTTTTGTTGTGATGAGTGGGGAGT 1419
|||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 1020 TTGGCCGTTTTTTGCGGAGCAGCAGACAAATTGTAAGTTCTGTTGTGATGAGTGGGGAGT 1079
Query 1420 TGGTGTCGAGATTGGTGGAGATGTTAAGAGGGAGGAGGTCGAGACAGTGGTTAGAGAGCT 1479
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1080 TGGTATCGAGATTGGTGGAGATGTTAAGAGGGAGGAGGTCGAGATGGTGGTTAGAGAGCT 1139
Query 1480 AATGGATAGAGAGAAGGGAAAGAAAATGCGAGAGAAGGCCGTAGAGTGGCGGCGCTTGGC 1539
|||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 1140 CATGGATGGAGAGAAGGGAAAGAAAATGAGAGAGAAGGCGGTAGAGTGGCGGCGCTTGGC 1199
Query 1540 GAATGAAGCTACGGAGCATAAGCATGGTTCCTCGGTTGTGAATTTTGAGACGGTTGTGAG 1599
||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct 1200 GAATGAAGCAACGGAGCATAAGCATGGTTCCTCGTTTCTGAATTTTGAGACGATTGTGAG 1259
Query 1600 AAAGGTTCTTTTAAGGGAGTAG 1621
|||||||||||||||||||||
Sbjct 1260 CAAGGTTCTTTTAAGGGAGTAG 1281
Score = 392 bits (212), Expect = 4e-108
Identities = 277/307 (90%), Gaps = 9/307 (3%)
Strand=Plus/Plus
Query 217 TCGATAGCTGACGGTCTT-CCGGATACCGATGGGGATAAGACCCAAGATATCCCCGCCCT 275
||||| |||| ||| || ||||| || ||||| |||||||| |||||||||||||||||
Sbjct 142 TCGATCCCTGATGGT-TTACCGGAGACGGATGGAGATAAGACGCAAGATATCCCCGCCCT 200
Query 276 TTGTGTGTCCAC-CATGAAGAACTGCCTCGCTCCGTTCAAGGAGCTTCTCCGACGGATCA 334
|||||||||||| | |||||||| |||||||||||||| || || ||||| |||||||
Sbjct 201 TTGTGTGTCCACGGA-AAAGAACTGTCTCGCTCCGTTCAAAGAACTACTCCGGCGGATCA 259
Query 335 ACGAT-GTTGATGATGTTCCTCCGGTGAGCTGTATTGTATCGGACGGTGTGATGAGCTTT 393
|| || | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 260 ACAATAG-AGATGATGTTCCTCCGGTGAGCTGTATTGTATCGGACGGTGTGATGAGCTTT 318
Query 394 ACTCTTGACGCAGCAGAGGAACTCAATCTCCCAGAGGTTATTTTCTGGACGAACA-G--T 450
|||||||||||||||||||||||| | |||||||||||||||||||||| |||| | |
Sbjct 319 ACTCTTGACGCAGCAGAGGAACTCGGTGTCCCAGAGGTTATTTTCTGGACAAACAAGAGT 378
Query 451 GCTTGTGGTTTCATGACTTTTCTACACTTTTATCTCTTCATCGAAAAAGGCTTATCTCCG 510
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 379 GCTTGTGGTTTCATGACTTTTCTACACTTTTATCTCTTCATCGAGAAAGGCTTATCTCCG 438
Query 511 TTTAAAG 517
|||||||
Sbjct 439 TTTAAAG 445
Score = 206 bits (111), Expect = 6e-52
Identities = 132/142 (93%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 1 ATGGCATCTCCT-GCTGTCCATAGCAAACAAAAACCACATGTTGTTTGCGTGCCTCACCC 59
|||||||||||| || |||| ||||| |||||||||||| || |||||||| ||||||||
Sbjct 1 ATGGCATCTCCTGGC-GTCCGTAGCACACAAAAACCACACGTAGTTTGCGTTCCTCACCC 59
Query 60 GGCTCAAGGCCACATCAACCCGATGCTAAAAGTGGCTAAACTCCTCCACGCGAGAGGCTT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 60 GGCTCAAGGCCACATCAACCCGATGCTAAAAGTGGCTAAACTCCTCCACGCTAGAGGCTT 119
Query 120 CCATGTCACCTTCGTCAACACC 141
||| |||||| |||||||||||
Sbjct 120 CCACGTCACCATCGTCAACACC 141
Score = 62.1 bits (33), Expect = 1e-08
Identities = 33/33 (100%), Gaps = 0/33 (0%)
Strand=Plus/Plus
Query 678 AGATGAAAGTTACATGTCTAAGGAGCATCTAGA 710
|||||||||||||||||||||||||||||||||
Sbjct 444 AGATGAAAGTTACATGTCTAAGGAGCATCTAGA 476
> Ahg335478 jgi|Araly1|335478|fgenesh1_pg.C_scaffold_1002043
Length=1467
Score = 900 bits (487), Expect = 0.0
Identities = 782/924 (85%), Gaps = 21/924 (2%)
Strand=Plus/Plus
Query 678 AGATGAAAGTTACATGTCTAAGGAGCATCTAGACACGGTTATAGATTGGATACCATCAAT 737
||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| ||
Sbjct 516 AGATGAAAGTTACATGTCTAAAGAGCATCTAGACACAGTTGTAGATTGGATACCATCGAT 575
Query 738 GAAGAATCTTAGGCTAAAAGACATCCCTAGCTTCATACGTACCACTAATCCTGACGACAT 797
||||||||||||| |||| ||||||||||||| ||| |||||||| ||||||||| ||||
Sbjct 576 GAAGAATCTTAGGTTAAAGGACATCCCTAGCTACATCCGTACCACAAATCCTGACAACAT 635
Query 798 AATGCTCAATTTCATCATTCAAGAGGTGGAGCAATCCAAACGCGCCAGTG--ATCATTCT 855
|||||| |||||| |||||| |||||| |||| ||||||||| ||| ||| ||||||||
Sbjct 636 AATGCTAAATTTCCTCATTCGAGAGGTCGAGCGATCCAAACGGGCCGGTGCTATCATTCT 695
Query 856 CAATACGTTCGATGATCTTGATCATGATCTTATACAATCTATGCAATCTATTTTATTACC 915
||| ||||| ||||| || || |||||| |||| || ||||||||||||| | ||||
Sbjct 696 CAACACGTTTGATGAACTCGAGCATGATGTTATCCAGTCTATGCAATCTA--CT-CTACC 752
Query 916 TCCGGTTTATACGATTGGACCGCTCCATCTCCTAGCAAACCAGGAAATTGACGAGGTTAG 975
|||||||||| ||||||||||||| |||||||| | || ||||||| || || | |||
Sbjct 753 TCCGGTTTATTCGATTGGACCGCTTCATCTCCTTGTGAAGGAGGAAATCGATGAAGCTAG 812
Query 976 TGAAATAGGACGGATGGGATTAAATTTGTGGAAAGAAGATACAGAATGTTTGGATTGGTT 1035
|||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |
Sbjct 813 TGAAATAGGACGGATGGGATTAAATTTGTGGAGAGAGGAGACAGAATGTTTGGATTGGCT 872
Query 1036 GGACAGTAAAACGACTCCAAACAGCGT-CGTTTTTGTTAATTTTGGATGCATAACGGTGA 1094
|| | |||||| |||||| ||||| | |||||||||| ||||||||||||||||||
Sbjct 873 CGATACTAAAAC---TCCAAATAGCGTTC-TTTTTGTTAACTTTGGATGCATAACGGTGT 928
Query 1095 TGAGTGCAAAACAACTTCTTGAGTTTGCTTGGGGTTTGGCGGCAAGTGGGAAAGAGTTTT 1154
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 929 TGAGTGCAAAACAACTTGAAGAGTTTGCTTGGGGTTTGGCGGCAAGTGGGAAAGCGTTTT 988
Query 1155 TATGGGTGATCCGGCCGGATTTAGTTGCCGGAGAGACGACGGCGATTCT-CT-C-AGAGT 1211
| ||||| ||||| || ||||||| | ||||||| ||| || | |||| | | |||||
Sbjct 989 TGTGGGTTATCCGACCTAATTTAGTGGTCGGAGAGGCGATGGTGGTTCTTCCGCCAGAGT 1048
Query 1212 TTTTAACGGAGACGGCAGACCGCG-GAATGCTGGTGAGTTGGTGTTCTCAAGAAAAAGTT 1270
||||||||||||| |||||| | ||||| | |||||||||||| |||| || ||||||
Sbjct 1049 TTTTAACGGAGACAATAGACCG-GAGAATGTTAGTGAGTTGGTGTCCTCAGGAGAAAGTT 1107
Query 1271 ATTTCCCACCCTATGGTTGGAGGGTTCTTGACGCATTGCGGGTGGAACTCGACACTCGAA 1330
|||| || || | | |||||||||||||| |||||||||||||| || || | ||
Sbjct 1108 CTTTCTCATCCGGCGATCGGAGGGTTCTTGACACATTGCGGGTGGAATTCAACGTTGGAG 1167
Query 1331 AGTATCTCTGGTGGTGTTCCGATAATATGCTGGCCGT-TTTTTGCCGAGCAGCAAACGAA 1389
||| |||| ||||||||||| || ||||| ||||||| ||||| | || || | |||||
Sbjct 1168 AGTCTCTCCGGTGGTGTTCCAATGATATGTTGGCCGTGTTTTT-CGGAACAACCGACGAA 1226
Query 1390 TTGTAAGTTTTGTTGTGATGAGTGGGGAGTTGGTGTCGAGATTGGTGGAGATGTTAAGAG 1449
|||||||||||||||||||||||||||||| ||| | ||||| ||| ||||||| |||||
Sbjct 1227 TTGTAAGTTTTGTTGTGATGAGTGGGGAGTGGGTATAGAGATCGGTAGAGATGTGAAGAG 1286
Query 1450 GGAGGAGGTCGAGACAGTGGTTAGAGAGCTAATGGATAGAGAGAAGGGAAAGAAAA-TGC 1508
|||||||||||||| |||||||||||||| |||||| ||||||||||||| |||| ||
Sbjct 1287 AGAGGAGGTCGAGACGGTGGTTAGAGAGCTTATGGATGGAGAGAAGGGAAA-AAAACTGA 1345
Query 1509 GAGAGAAGGCCGTAGAGTGGCGGCGCTTGGC-GAATGAAGCTACGGAGCATAAGCATGGT 1567
|||| ||||| | |||||||| ||| ||||| || ||||| ||| ||||||| | ||||
Sbjct 1346 GAGAAAAGGCGGAAGAGTGGCAGCGATTGGCCGAG-GAAGCGACGAAGCATAAACTTGGT 1404
Query 1568 TCCTCGGTTGTGAATTTTGAGACG 1591
|| ||||| ||||||||||||||
Sbjct 1405 TCGTCGGTCATGAATTTTGAGACG 1428
Score = 508 bits (275), Expect = 4e-143
Identities = 424/495 (86%), Gaps = 14/495 (3%)
Strand=Plus/Plus
Query 30 AAAACCACATGTTGTTTGCGTGCCTCACCCGGCTCAAGGCCACATCAACCCGATGCTAAA 89
||||||||| || |||||||||||| |||||||||||||||||||||| |||||||| ||
Sbjct 30 AAAACCACACGTAGTTTGCGTGCCTTACCCGGCTCAAGGCCACATCAATCCGATGCTGAA 89
Query 90 AGTGGCTAAACTCCTCCACGCGAGAGGCTTCCATGTCACCTTCGTCAACACCGTCTATAA 149
|||||||||||| || |||| | |||||| ||||||||||||||||||||||||| ||
Sbjct 90 AGTGGCTAAACTTCTTTACGCTAAAGGCTTTTATGTCACCTTCGTCAACACCGTCTACAA 149
Query 150 CCACAACCGTCTCCTCCGGTCCCGTGGGCCTTACGCACTGGACGGACTTCCTTCTTTCCG 209
||||||||||||||| ||||||||||| || |||| || ||||| || | || |||||
Sbjct 150 CCACAACCGTCTCCTACGGTCCCGTGGCCCCAACGCGCTCGACGGGCTACGGTCATTCCG 209
Query 210 GTTCGAGTCGATAGCTGACGGTCTTCCGGATACCGATGGGGATAAGACCCAAG-ATATC- 267
||||||||| || ||||||| || ||||| || ||||| |||| ||| | || ||| |
Sbjct 210 GTTCGAGTCCATCCCTGACGGCCTACCGGAAACTGATGGCGATAGGACGC-AGCATA-CT 267
Query 268 CCCGCCCTTTGTGTGTCCACCATGA-AGA-ACTGCCTCGCTCCGTTCAAGGAGCTTCTCC 325
|| || |||| ||||||| ||| | | |||| |||||||||||||||||||||||||
Sbjct 268 CCTACCGTTTGCGTGTCCA--TTGAGAAATACTGTCTCGCTCCGTTCAAGGAGCTTCTCC 325
Query 326 -GACGGATCAACGAT-GTTGATGATGTTCCTCCGGTGAGCTGTATTGTATCGGACGGTGT 383
| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||
Sbjct 326 TG-CGGATCAACGATAG-AGATGATGTTCCTCCAGTGAGCTGTATTGTATCGGACGGTGT 383
Query 384 GATGAGCTTTACTCTTGACGCAGCAGAGGAACTCAATCTCCCAGAGGTTATTTTCTGGAC 443
|||||| ||||||||||||||||| ||||| ||| | |||||||| ||||||| |||||
Sbjct 384 GATGAGTTTTACTCTTGACGCAGCGGAGGAGCTCGGTGTCCCAGAGATTATTTTTTGGAC 443
Query 444 GAACAGTGCTTGTGGTTTCATGACTTTTCTACACTTTTATCTCTTCATCGAAAAAGG-CT 502
|| |||||||||||||||||||||||||||||||||||||| |||||||| || || ||
Sbjct 444 CAATAGTGCTTGTGGTTTCATGACTTTTCTACACTTTTATCTTTTCATCGAGAAGGGTCT 503
Query 503 TATCTCCGTTTAAAG 517
|||||| |||||||
Sbjct 504 -ATCTCCTTTTAAAG 517
> Ahg472480 jgi|Araly1|472480|fgenesh2_kg.1__2434__AT1G22400.1
Length=1639
Score = 634 bits (343), Expect = 0.0
Identities = 754/950 (79%), Gaps = 37/950 (4%)
Strand=Plus/Plus
Query 678 AGATGAAAGTTACATGTCTAAGGAG--CATCTA-GACACGGTTATAGATTGGATACCATC 734
|||||| |||||| || | |||||| | | | |||||||||||||||| |||||| |
Sbjct 528 AGATGAGAGTTACTTGACGAAGGAGTACTTAGACGACACGGTTATAGATTTTATACCAAC 587
Query 735 AATGAAGAATCTTAGGCTAAAAGACATCCCTAGCTTCATACGTACCACTAATCCTGACGA 794
||||||||||| | |||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 588 CATGAAGAATCTCAAACTAAAAGATATTCCTAGCTTCATACGTACCACTAATCCTGATGA 647
Query 795 CATAATGCTCAATTTCATCATTCAAGAGGTGGAGCAATCCAAACGCGC--CAG-TGATCA 851
| ||| | |||||| | | | ||| |||| | ||||||| || | | | ||||
Sbjct 648 TGTTATGATTAATTTCGCCCTCCGCGAGACCGAGCGAGCCAAACGTGCTTCTGCT-ATCA 706
Query 852 TTCTCAATACGTTCGATGATCTTGATCATGATCTTATACAATCTATGCAATCTATTTTAT 911
|||| || || || ||||| ||||| |||||| || | || ||||||| || | || |
Sbjct 707 TTCTAAACACATTTGATGACCTTGAGCATGATGTTGTTCAGGCTATGCAGTCCA--TT-T 763
Query 912 TACCTCCGGTTTATACGA-TTGGACCGCTCCATCTCCTAGCAAACCAGGAAATTGACG-A 969
|||||||||||||| | | |||||||||| |||||| ||||||||| ||| ||||| | |
Sbjct 764 TACCTCCGGTTTATTC-AGTTGGACCGCTTCATCTCTTAGCAAACCGGGAGATTGAAGAA 822
Query 970 GGTTAGTGAAATAGGACGGATGGGATT-AAATTTGTGGAAAGAAGATACAGAATGTTTGG 1028
|| |||||| || ||| |||| | || ||||| |||||||| || | ||||||||||
Sbjct 823 GG-TAGTGAGATTGGAATGATGAG-TTCGAATTTATGGAAAGAGGAGATGGAATGTTTGG 880
Query 1029 ATTGG-TTGGACAGTAAAACGACTCCAAACAGCGTCGTTTTTGTTAA-TTTTGGATGCAT 1086
||||| || || | | || |||| |||||| || ||| |||| ||| ||| ||||
Sbjct 881 ATTGGCTT-GATACT--AA-GACTAAAAACAGTGTAATTTACATTAACTTTGGGA-GCAT 935
Query 1087 AACGGTGATGAGTGCAAAACAACTTCTTGAGTTTGCTTGGGGTTTGGCGGCAAGTGGGAA 1146
|||||| |||||| || || ||| | |||||||||||||||||||||| |||||||||
Sbjct 936 AACGGTTTTGAGTGTGAAGCAGCTTGTGGAGTTTGCTTGGGGTTTGGCGGGAAGTGGGAA 995
Query 1147 AGAGTTTTTATGGGTGATCCGGCCGGATTTAGTTGCCGGAGA-GACGACGGCGATT-CTC 1204
|||||||||||||||||| |||||||||||||| || ||||| || | | | || | |
Sbjct 996 AGAGTTTTTATGGGTGATTCGGCCGGATTTAGTAGCTGGAGAGGA-GGCAATGGTTCCAC 1054
Query 1205 TCAGAGTTTTTAACGGAGACGGCAGACCGCG-GAATGCTGGTGAGTTGGTGTTCTCAAGA 1263
| ||||||||||||||||| |||||| | | ||||| | |||||||||| |||| ||
Sbjct 1055 -CGGAGTTTTTAACGGAGACCAAAGACCG-GAGTATGCTAGCGAGTTGGTGTCCTCAGGA 1112
Query 1264 AAAAGTTATTTCCCACCCTATGGTTGGAGGGTTCTTGACGCATTGCGGGTGGAACTCGAC 1323
|||||| |||| || || | ||||||||||||||||||||||||||||||||||||
Sbjct 1113 GAAAGTTCTTTCTCATCCGGCGATTGGAGGGTTCTTGACGCATTGCGGGTGGAACTCGAT 1172
Query 1324 ACTCGAAAGTATCTCTGGTGGTGTTCCGATAATATGCTGGCCGTTTTTTGCCGAGCAGCA 1383
| | |||||| | || |||| ||||| || | || ||||| |||||||| || || ||
Sbjct 1173 ATTAGAAAGTCTTTCAAGTGGAGTTCCAATGGTGTGTTGGCCATTTTTTGCTGACCAACA 1232
Query 1384 AACGAATTGTAAGTTTTGTTGTGATGAGTGGGGA-GTTGGTG-TCGAGATTGGTGGAGAT 1441
|| ||||||||||| ||||||||| ||||||| | ||||| | | ||||| |||||||||
Sbjct 1233 AATGAATTGTAAGTATTGTTGTGACGAGTGGG-ATGTTGG-GATTGAGATAGGTGGAGAT 1290
Query 1442 GTTAAGAGGGAGGAGGTCGAGACAGTGGTTAGAGAGCTAATGGATAGAGAGAAGGGAAAG 1501
|| ||||| || || || ||||| |||||||||||||| |||||| |||| || |||||
Sbjct 1291 GTGAAGAGAGAAGAAGTTGAGACGGTGGTTAGAGAGCTCATGGATGGAGATAAAGGAAAA 1350
Query 1502 AAAATGCGAGAGAAGGC-CGTAGAGTGGCGGCGCTTGGCGAATGAAGCTACGGAGCATAA 1560
|||||| || ||||||| | ||||||||| ||||||||| | | ||| || ||||||||
Sbjct 1351 AAAATGAGACAGAAGGCGC-TAGAGTGGCAGCGCTTGGCTAGGGGAGCGACAGAGCATAA 1409
Query 1561 GCATGGTTCCTCGGTTGTGAATTTTGAGACGGTTGTGAG-AAAGGTTCTT 1609
| ||||||||| || |||||||||||||||||||| || ||| |||||
Sbjct 1410 ACTTGGTTCCTCCGTGGTGAATTTTGAGACGGTTGTTAGCAAAT-TTCTT 1458
Score = 459 bits (248), Expect = 4e-128
Identities = 416/497 (84%), Gaps = 12/497 (2%)
Strand=Plus/Plus
Query 27 ACAAAAACCACATGTTGTTTGCGTGCC-TCACCCGGCTCAAGGCCACATCAACCCGATGC 85
||||||||||||||| ||||| || || | | ||||||||||||||||||||||| |||
Sbjct 39 ACAAAAACCACATGTAGTTTGTGTTCCAT-ATCCGGCTCAAGGCCACATCAACCCTATGA 97
Query 86 TAAAAGTGGCTAAACTCCTCCACGCGAGAGGCTTCCATGTCACCTTCGTCAACACCGTCT 145
| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 98 TGAAAGTGGCTAAACTCCTCCACGCTAGAGGCTTCCACGTCACCTTCGTCAACACCGTCT 157
Query 146 ATAACCACAACCGTCTCCTCCGGTCCCGTGGGCCTTACGCACTGGACGGACTTCCTTCTT 205
| |||||||| ||| |||| || || |||||| || |||| || || || |||||||| |
Sbjct 158 ACAACCACAATCGTTTCCTTCGTTCTCGTGGGTCTAACGCCCTCGAGGGGCTTCCTTCGT 217
Query 206 TCCGGTTCGAGTCGATAGCTGACGGTCTTCCGGATACCGATGGGGATAAGACCCAAGATA 265
||||||| ||||| || |||||||||| ||||| ||||| |||| || || || |
Sbjct 218 TCCGGTTTGAGTCCATTCCTGACGGTCTACCGGAGACCGACATGGATGCCACGCAGGACA 277
Query 266 TCCCCGCCCTTTGTGTGTCCACCATGAAGAACTGCCTCGCTCCGTTCAAG-GAGCTTCTC 324
|| | |||||||||| |||||||||||||||||| |||||||||||| || |||||| ||
Sbjct 278 TCACAGCCCTTTGTGAGTCCACCATGAAGAACTGTCTCGCTCCGTTC-AGAGAGCTTGTC 336
Query 325 CGA-CGGATCAACGATGTTGATGATGTTCCTCCGGTGAGCTGTATTGTATCGGACGGT-G 382
| | |||||||||| | ||| |||||||||||||||||||||||||||| |||||| |
Sbjct 337 C-AGCGGATCAACGCCGGAGATAATGTTCCTCCGGTGAGCTGTATTGTATCCGACGGTTG 395
Query 383 TGATGAGCTTTACTCTTGACGCAGCAGAGGAACTCA-ATCTCCCAGAGGTTATTTTCTGG 441
| ||||||||||||||||||| || ||||| || | |||| |||||| |||| |||
Sbjct 396 T-ATGAGCTTTACTCTTGACGTTGCGGAGGAGCTTGGAG-TCCCGGAGGTTCTTTTTTGG 453
Query 442 ACGAACAGTGCTTGTG-GTTTCATGACTTTTCTACACTTTTATCTCTTCATCGAAAAAGG 500
|||| ||||| ||||| ||| | || ||| |||||||||||||||||| ||||| || ||
Sbjct 454 ACGACCAGTGGTTGTGCGTT-CTTGGCTTATCTACACTTTTATCTCTTTATCGAGAAGGG 512
Query 501 CTTATCTCCGTTTAAAG 517
||||||||| | ||||
Sbjct 513 TTTATCTCCGCTAAAAG 529
> Ahg313123 jgi|Araly1|313123|fgenesh1_pm.C_scaffold_1001903
Length=1476
Score = 621 bits (336), Expect = 5e-177
Identities = 758/957 (79%), Gaps = 48/957 (5%)
Strand=Plus/Plus
Query 678 AGATGAAAGTTACATGTCTAAGGAGCATCTAGACACGGTTATAGATTGGATACCATCAAT 737
|||||| |||| | || | |||||| | || ||||| ||||||||||||||||| |||||
Sbjct 516 AGATGAGAGTTGCTTGACGAAGGAGTACCTGGACACAGTTATAGATTGGATACCGTCAAT 575
Query 738 GAAGAATCTTAGGCTAAAAGACATCCCTAGCTTCATACGTACCACTAATCCTGACGACAT 797
||| ||||| | |||||||||| ||||| ||||||||||||||||||||| |||||||
Sbjct 576 GAAAAATCTAAAATTAAAAGACATTCCTAGTTTCATACGTACCACTAATCCTAACGACAT 635
Query 798 AATGCTCAATTTCATCATTC--AAGAGGTGGAGCAATCCAAACGCGCCAGTG--ATCATT 853
||||||||| ||||| | | ||| | | | | ||||||||||| || ||||||
Sbjct 636 AATGCTCAACTTCATTGTCCGTGAGACAT-G-TCGAGCCAAACGCGCCTCTGCTATCATT 693
Query 854 CTCAATACGTTCGATGATCTTGATCATGATC-TTATACAATCTATGCAATCTATTTTATT 912
||||| |||||||||||||| || | ||| | |||| | ||||||||||| | || ||
Sbjct 694 CTCAACACGTTCGATGATCTCGAGCCTGA-CATTATCCGGTCTATGCAATCCA--TT-TT 749
Query 913 ACCTCCGGTTTATACGATTGGACCGCTCCATCTCCTAGCAAACCAGGAAATTGACGAGGT 972
||| ||||||||| | ||||||||||| |||||| ||| ||||| ||| ||||| || |
Sbjct 750 ACCACCGGTTTATCCAATTGGACCGCTTCATCTCTTAGTAAACCGGGAGATTGAAGAAGA 809
Query 973 TAGTGAAATAGGACGGATGGGATTAAATTTGTGGAAAGAAG-ATACAGAATGTTTGGATT 1031
|||||| || ||| ||||||||| |||| | ||||||| || | || || ||||| ||||
Sbjct 810 TAGTGAGATTGGAAGGATGGGATCAAATCTATGGAAAG-AGAAGACTGAGTGTTTTGATT 868
Query 1032 GGTTGGACAGTAAAACGACTCCAAACAGCGTCGTTTTTGTTAA-TTTTGGATGCATAACG 1090
|| | || | | || | ||||||| ||| | |||| |||||| ||| ||| |||||||
Sbjct 869 GGCTCGATACT--AA-GGCTCCAAATAGCATTGTTTATGTTAACTTTGGGA-GCATAACA 924
Query 1091 GTGATGAGTGCAAAACAACTTCTTGAGTTTGCTTGGGGTTTGGCGGCAAGTGGGAAA-GA 1149
|||| | | ||| ||| | ||||||||||||||||||||||||| ||||| ||
Sbjct 925 ACAATGACCACGACACAGCTTGTGGAGTTTGCTTGGGGTTTGGCGGCAA-CAGGAAAGGA 983
Query 1150 GTTTTTATGGGTGATCCGGCCGGATTTAGTTGCCGGAGAGACGACGGCGATTCTC-TCAG 1208
||||||||||||||| ||||| |||||||| || |||||| | | | ||||| | ||||
Sbjct 984 GTTTTTATGGGTGATGCGGCCCGATTTAGTAGCTGGAGAGGGGGCAGTGATTC-CGTCAG 1042
Query 1209 AGTTTTTAACGGAGACGGCAGACCG-CGGAATGCTGGTGAGTTGGTGTTCTCAAGAAAAA 1267
|||||||| ||||||| | || || || |||||| ||||||||| |||| || |||
Sbjct 1043 AGTTTTTAGCGGAGACAACCGATCGAAGG-ATGCTGACAAGTTGGTGTCCTCAGGAGAAA 1101
Query 1268 GTTATTTCCCACCCTATG-G-TTGGAGGGTTCTTGACGCATTGCGGGTGGAACTCGACAC 1325
||| |||| || || | | | | ||||||||||||||||||||||||||||| |||||
Sbjct 1102 GTTCTTTCTCATCC-A-GCGATCGGAGGGTTCTTGACGCATTGCGGGTGGAATTCGACGT 1159
Query 1326 TCGAAAGTATCTC-TGGTGGTGTTCCGATAATATGCTGGCCGTTTTTTGCCGAGCAGCAA 1384
| |||||| | || || || |||||||| | || ||||| |||||||| ||||| |||
Sbjct 1160 TAGAAAGTCTTTCATGC-GGAGTTCCGATGGTGTGTTGGCCATTTTTTGCTGAGCAACAA 1218
Query 1385 ACGAATTGTAAGTTTTGTTGTGATGAGTGGGGAG-TTGGTG-TCGAGATTGGTGGAGATG 1442
|| ||||||||||||| ||||||||| |||| || |||| | | ||||||||||||||||
Sbjct 1219 ACAAATTGTAAGTTTTCTTGTGATGAATGGG-AGGTTGG-GATTGAGATTGGTGGAGATG 1276
Query 1443 TTAAGAGGGAGGAGGTCGAGACAGTGGTTAGAGAGCTAATGGATAGAGAGAAGGGAAAGA 1502
| |||||||| ||||| ||| | |||||||||||||| |||||| ||||||| ||||| |
Sbjct 1277 TGAAGAGGGAAGAGGTTGAGGCGGTGGTTAGAGAGCTCATGGATGGAGAGAAAGGAAA-A 1335
Query 1503 AA-ATGCGAGAGAAGGCCGTAG-AGTGGCGGCGCTTGGCGAATGAA-GCTACGGAGCATA 1559
|| ||| ||| ||||| | || |||||| ||| |||||| | ||| || || |||| |
Sbjct 1336 AAGATGAAAGAAAAGGCGG-AGGAGTGGCAGCGTTTGGCGGA-GAAAGCCACCGAGCTTC 1393
Query 1560 AGCATG-G-TTCCTCGGTTG-TGAATTTTGAGACGGTTGTGAGA-AAGGTTCTTTTA 1612
|||| | ||| ||||| | | |||||||||||| |||| | | |||||||| |||
Sbjct 1394 --CATGTGGTTCGTCGGT-GATAAATTTTGAGACGATTGTCA-ACAAGGTTCTCTTA 1446
Score = 453 bits (245), Expect = 2e-126
Identities = 428/516 (83%), Gaps = 14/516 (3%)
Strand=Plus/Plus
Query 1 ATGGCATCTCCTGCTGTCCATAGCAAACAAAAACCACATGTTGTTTGCGTGCCTCACCCG 60
|||| ||||| || ||| || || |||||||||||| || |||||||||||| |||||
Sbjct 1 ATGGGATCTCATGTTGTTTGTAACACACAAAAACCACACGTAGTTTGCGTGCCTTACCCG 60
Query 61 GCTCAAGGCCACATCAACCCGATGCTAAAAGTGGCTAAACTCCTCCACG-CGAGAGGCTT 119
|||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||
Sbjct 61 GCTCAAGGCCACATCAACCCGATGCTGAAAGTGGCTAAACTCCTCCACGTC-CGAGGCTT 119
Query 120 CCATGTCACCTTCGTCAACACCGTCTATAACCACAACCGTCTCCTCCGGTCCCGTGGGCC 179
||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
Sbjct 120 CCACGTCACCTTCGTCAACACCGTCTATAACCACAACCGTCTACTCTGGTCCCGTGGGGC 179
Query 180 TTACGCACTGGACGGACTTCCTTCTTTCCGGTTCGAGT-CGATAGCTGACGGTCTTCCGG 238
||||||| || ||||||||||| ||||||||||||| | ||| |||| ||||| || |
Sbjct 180 AAACGCACTCGATGGACTTCCTTCCTTCCGGTTCGAGTGC-ATACCTGATGGTCTACCTG 238
Query 239 ATACCGATGGGGATAAGACCCAAGATATCCCCGCCCTTTGTGTGTCCACCATGAAGAACT 298
| | | | |||| || || || ||||| |||||||| | |||||| ||||| ||||
Sbjct 239 AGAATGGCGTGGATGCCACGCAGGACATCCCTGCCCTTTGCGAGTCCACAATGAAAAACT 298
Query 299 GCCTCGCTCCGTTCAAGGAGCTTCTCC-GACGGATCAACG--ATGTTGATGATGTTCCTC 355
| |||| ||| |||||| ||||||||| | | ||| ||| | || || ||||| ||||
Sbjct 299 GTCTCGTTCCATTCAAGAAGCTTCTCCAG-CAGATTAACACCA-GT-GAGGATGTCCCTC 355
Query 356 CGGTGAGCTGTATTGTATCGGACGGTGT-GATGAGCTTTACTCTTGACGCAGCAGAGGAA 414
||||||||||||||||||| || ||| | |||||||||||||||||||| || || ||
Sbjct 356 CGGTGAGCTGTATTGTATCAGATGGT-TCGATGAGCTTTACTCTTGACGTTGCGGAAGAG 414
Query 415 CTCAATCTCCCAGAGGTTATTTTCTGGACGAAC-AGTGCTTGTGGTTTCATGACTTTTCT 473
|| | |||| ||||||||||| ||||| | ||||||||||| |||||| ||| |||
Sbjct 415 CTTGGTGTCCCGGAGGTTATTTTTTGGACCC-CTAGTGCTTGTGGCTTCATGGCTTATCT 473
Query 474 ACACTTTTATCTCTTCATCGAAAAAGGCTTATCTCC 509
||||||||||||||||||||| || || |||| |||
Sbjct 474 ACACTTTTATCTCTTCATCGAGAAGGGTTTATGTCC 509
> Ahg472476 jgi|Araly1|472476|fgenesh2_kg.1__2430__AT1G22360.2
Length=1480
Score = 536 bits (290), Expect = 2e-151
Identities = 627/785 (80%), Gaps = 42/785 (5%)
Strand=Plus/Plus
Query 678 AGATGAAAGTTACATG-TCTAAGGAGCATC-TAGACACGGTTATAGATTGGATACCATCA 735
||||||||||||| || | ||||| || | ||||||| |||||||||||||||||
Sbjct 570 AGATGAAAGTTACTTGAAC-AAGGAACA-CTTAGACACAAAAATAGATTGGATACCATCG 627
Query 736 ATGAAGAATCTTAGGCTAAAAGACATCCCTAGCTTCATACGTACCACTAATCCTGACGAC 795
|||||||| || || ||||||||||||||||||||||| || || |||||||||||||||
Sbjct 628 ATGAAGAACCTAAGACTAAAAGACATCCCTAGCTTCATCCGAACAACTAATCCTGACGAC 687
Query 796 ATAATGCTCAA-TTTCATCATTCAAGAGG-TGGAGCAATCCAAACGCGC--CAG-TGATC 850
|| |||||||| ||| ||||| | |||| | || | | |||||||||| ||| | |||
Sbjct 688 ATCATGCTCAACTTT-ATCATCCGTGAGGCT-GACCGAGCCAAACGCGCTTCAGCT-ATC 744
Query 851 ATTCTCAATACGTTCGATGATCTTGATCATGATC-TTATACAATCTATGCAATCTATTTT 909
|||||||| ||||| |||||||| || ||||| | |||| |||||||||||||||| ||
Sbjct 745 ATTCTCAACACGTTTGATGATCTCGAACATGA-CGTTATCCAATCTATGCAATCTA--TT 801
Query 910 ATTACCTCCGGTTTA-TACGATTGGACCGCTCCATCTCCTAGCA-AACCAGGAAATTGA- 966
||||||||||||| | | ||||||||||| ||| | |||| | || || || | | |
Sbjct 802 -GTACCTCCGGTTTACT-CTATTGGACCGCTACATTTACTAG-AGAAACAAGAGA-TCAG 857
Query 967 CGAGGTTAGTGAAATAGGACGGATGGGATTAAATTTGTGGAAAGAAGATACAGAATGTTT 1026
|||| |||||| || |||||||||||| |||||||||| |||||| || || |||||
Sbjct 858 TGAGGATAGTGAGATCCGACGGATGGGATCGAATTTGTGGAGAGAAGAGACTGAGTGTTT 917
Query 1027 GGATTGGTTGGACAGTAAAACGACTCCAAACAGCGTCGTTTTTGTTAA-TTTTGGATGCA 1085
||||||| | | | | ||| | ||||| |||| || || | |||||| ||| ||| | |
Sbjct 918 GGATTGGCTAAATACT-AAA-G-CTCCAGACAGTGTTGTGTATGTTAACTTTGGGA-GTA 973
Query 1086 TAACGGTGATGAGTGCAAAACAACTTCTTGAGTTTGCTTGGGGTTTGGCGGCAA-GTGGG 1144
|||| ||| |||| || ||||| ||| | |||||||| ||||||||||| |||| | |||
Sbjct 974 TAACTGTGTTGAGCGCTAAACAGCTTGTGGAGTTTGCATGGGGTTTGGCAGCAACG-GGG 1032
Query 1145 AAAGAGTTTTTATGGGTGATCCGGCCGGATTTAGTTGCCGGAGAGACGACGGC---GATT 1201
||||||||||| ||||||||||| || |||||||| ||||| | || || ||| | ||
Sbjct 1033 AAAGAGTTTTTGTGGGTGATCCGTCCAGATTTAGTAGCCGG-G-GATGA-GGCAATGGTT 1089
Query 1202 -CTCTCAGAGTTTTTAACGGAGACGGCAGACC-GCGGAATGCTGGTGAGTTGGTGTTCTC 1259
| | | |||||||||||||| || || |||| | || ||| | | ||||||||| |||
Sbjct 1090 CCAC-CGGAGTTTTTAACGGAAACAGCGGACCGGAGG-ATGTTAGCAAGTTGGTGTCCTC 1147
Query 1260 AAGAAAAAGTTATTTCCCACCCTATGGTTGGAGGGTTCTTGACGCATTGCGGGTGGAACT 1319
|||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 1148 AAGAGAAAGTCCTTTCCCACCCGGCGATTGGAGGGTTCTTGACGCATTGCGGGTGGAACT 1207
Query 1320 CGACACTCGAAAGTATCTCTGGTGGTGTTCCGATAATATGCTGGCCGTTTTTTGCCGAGC 1379
|||| | |||||| | | ||| || |||||||| | || ||||| || ||||| ||||
Sbjct 1208 CGACGTTGGAAAGTCTATGTGGCGGAGTTCCGATGGTGTGTTGGCCCTTCTTTGCAGAGC 1267
Query 1380 AGCAAACGAATTGTAAGTTTTGTTGTGATGAGTGGGGAGTTGGTG-TCGAGATTGGTGGA 1438
| ||||| ||||||||||||| | ||||||| |||| || ||| | | ||||| || |||
Sbjct 1268 AACAAACAAATTGTAAGTTTTCTCGTGATGAATGGG-AGGTGGGGATTGAGATAGGCGGA 1326
Query 1439 GATGT 1443
|||||
Sbjct 1327 GATGT 1331
> Ahg472478 jgi|Araly1|472478|fgenesh2_kg.1__2432__AT1G22370.2
Length=1422
Score = 399 bits (216), Expect = 2e-110
Identities = 415/511 (81%), Gaps = 14/511 (3%)
Strand=Plus/Plus
Query 1 ATGGCATCTCCTGCTG-TCCATAGC-AAACAAAAACCACATGTTGTTTGCGTGCCTCACC 58
|||||||||| ||| | | | |||| || |||||||||| || |||||||| ||| ||
Sbjct 1 ATGGCATCTCATGCCGTTTC-TAGCGGAA-AAAAACCACACGTAGTTTGCGTCCCTTTCC 58
Query 59 CGGCTCAAGGCCACATCAACCCGATGCTAAAAGTGGCTAAACTCCTCCACGCGAGAGGCT 118
| ||||||||||||||||| |||||||| |||||||||||||||||| | || |||||||
Sbjct 59 CAGCTCAAGGCCACATCAATCCGATGCTCAAAGTGGCTAAACTCCTCTATGCCAGAGGCT 118
Query 119 TCCATGTCACCTTCGTCAACACCGTCTATAACCACAACCGTCTCCTCCGGTCCCGTGGGC 178
||||||| ||||| ||||||||| ||||||||| ||||||||| ||||||| ||||| |
Sbjct 119 TCCATGTTACCTTTGTCAACACCAACTATAACCATAACCGTCTCATCCGGTCACGTGGTC 178
Query 179 CTTACGCACTGGACGGACTTCCTTCTTTCCGGTTCGAGTCGATAGCTGACGGTCTTCCGG 238
| |||| || ||||| |||| ||||||||| || ||||| || |||||||||| ||||
Sbjct 179 CCAACGCCCTTGACGGGCTTCATTCTTTCCGATTTGAGTCCATCCCTGACGGTCTACCGG 238
Query 239 ATACCGATGGGGATAAGACCCAAGATATCCCCGC-CCTTTGTGTGTCCACCATGAAGAAC 297
| ||| | ||| | || ||| | ||| | |||||||| |||||||||||| ||
Sbjct 239 AAACCAACAAGGACGTCATGCAGGATGT-CCCTCTCCTTTGTGAGTCCACCATGAAAAAT 297
Query 298 TGCCTCGCTCCGTTCAAGGAGCTTCTCCGACGGATCAACGA--TGTTGATGATGTTCCTC 355
|| || ||||| ||||||||||||||| | ||||||||| | | || ||||||||||
Sbjct 298 TGTCTAGCTCCTTTCAAGGAGCTTCTCTGGCGGATCAAC-ACCCG-AGAAGATGTTCCTC 355
Query 356 CGGTGAGCTGTATTGTATCGGACGGTGTGATGAGCTTTACTCTTGACGCAGCAGAGGAAC 415
||||||||||||||||||| |||||||||||||||||||||||||| || || ||||| |
Sbjct 356 CGGTGAGCTGTATTGTATCCGACGGTGTGATGAGCTTTACTCTTGATGCTGCGGAGGAGC 415
Query 416 TCA-ATCTCCCAGAGGTTATTTTCTGGACGAACA-GTGCTTGTGGTTTCATGACTTTTCT 473
| | |||| || ||| |||| ||||| | || |||||||||| ||| || ||| |||
Sbjct 416 TTGGAG-TCCCGGATGTTCTTTTTTGGAC-ACCAAGTGCTTGTGGCTTCTTGGCTTATCT 473
Query 474 ACACTTTTATCTCTTCATCGAAAAAGGCTTA 504
|||||| |||| ||||||||| || || |||
Sbjct 474 ACACTTCTATCGCTTCATCGAGAAGGGGTTA 504
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60753940775
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5