BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G22830.1 Length=2433 Score E Sequences producing significant alignments: (Bits) Value Ahg472526 jgi|Araly1|472526|fgenesh2_kg.1__2480__AT1G22830.1 1714 0.0 Ahg476279 jgi|Araly1|476279|fgenesh2_kg.2__1409__AT1G71490.1 1003 0.0 > Ahg472526 jgi|Araly1|472526|fgenesh2_kg.1__2480__AT1G22830.1 Length=2335 Score = 1714 bits (928), Expect = 0.0 Identities = 1099/1180 (93%), Gaps = 17/1180 (1%) Strand=Plus/Plus Query 1219 TTCTGTAGCTATGATTAATGGTTTAAAGGCATGCTCACACATTGGAGCGTTAAAGTGGGG 1278 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1169 TTCTGTAGCTATGATTAATGGTTTAAAGGCATGCTCACACATTGGAGCGTTACAGTGGGG 1228 Query 1279 GAAAGTATTTCATTGCCTTGTGATCCGTAGTTGTAGTTTTTCCCATGATATTGACAATGT 1338 ||||||||||||||||||||||||||||| | | | || |||||| ||||||||||| Sbjct 1229 AAAAGTATTTCATTGCCTTGTGATCCGTAG-T-T-G---TTGCCATGAAATTGACAATGT 1282 Query 1339 TCGGAATTCGTTGATCACAATGTACTCAAGATGCAGTGATCTTAGGCACGCGTTTATAGT 1398 ||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| Sbjct 1283 TCGAAATTCGTTGATTACAATGTACTCAAGATGCAGCGATCTTAGGCACGCCTTTATAGT 1342 Query 1399 GTTTCAGCAGGTTGAAGCAAATAGTTTGAGTACATGGAATTCTATCATTTCCGGTTTTGC 1458 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1343 GTTTCAGCAGATTGAAGCAAATAGTTTGAGTACATGGAATTCTATCATTTCCGGTTATGC 1402 Query 1459 ATACAACGAGAGATCAGAAGAAACCTCTTTCCTGCTCAAGGAGATGTTGCTCTCTGGATT 1518 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1403 ACACAACGAGAGATCAGAAGAAACCTCTTTCCTGCTCAAGGAGATGTTGCTCTCTGGCTT 1462 Query 1519 TCACCCAAATCACATTACGCTTGCTAGCATTCTCCCTCTTTTTGCTCGGGTGGGAAACCT 1578 |||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 1463 TCACCCAAATTACATTACGCTTGCTAGCATTCTCCCTCTTTGTGCTCGGGTGGCAAACCT 1522 Query 1579 GCAACATGGGAAAGAGTTTCACTGCTACATCCTGAGACGCCAAAGCTACAAGGACTGTTT 1638 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1523 GCAACACGGGAAAGAGTTTCACTGCTACATCCTGAGGCGCCAAAGCTACAAGGACTGTTT 1582 Query 1639 AATCCTGTGGAACTCCCTTGTCGATATGTATGCAAAATCCGGTGAAATCATAGCTGCAAA 1698 ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct 1583 AATCCTGTGGAACTCTCTTGTCGATATGTATGCAAAATCTGGGGAAATCATAGCTGCAAA 1642 Query 1699 GCGAGTATTTGATTCGATGAGGAAGAGGGACAAAGTGACATACACTTCTTTGATCGATGG 1758 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct 1643 GCGAGTATTTGATTCGATGAGCAAGAGGGACAAAGTGACATACACTTCCTTGATAGATGG 1702 Query 1759 ATATGGCAGGCTGGGTAAAGGAGAAGTCGCATTGGCATGGTTCAAGGATATGGACAGATC 1818 |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| Sbjct 1703 ATATGGCAGGCTGGGTAAAGGAGAAGTCTCCTTGGCATGGTTCAAGGATATGAACAGATC 1762 Query 1819 CGGTATCAAACCTGATCATGTAACTATGGTTGCAGTTTTATCAGCTTGCAGCCATTCCAA 1878 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 1763 CGGTATCAAACCTGATCATGTAACTTTGGTTGCTGTTTTATCAGCTTGCAGCCATTCCAA 1822 Query 1879 TTTAGTGCGTGAAGGACACTGGTTGTTTACGAAGATGGAGCA-TGTGTTTGGTATACGCC 1937 |||||||| |||||||||| |||||||||||||||||||| | || |||||||||||||| Sbjct 1823 TTTAGTGCATGAAGGACACAGGTTGTTTACGAAGATGGAG-ACTGGGTTTGGTATACGCC 1881 Query 1938 TTCGCCTTGAACACTATTCTTGTATGGTTGATCTTTATTGCAGAGCAGGTTACCTGGATA 1997 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||| | Sbjct 1882 CTCGCCTTGAACACTATTCTTGTATGGTTGATCTTTATTGCAGAGTAGGTGACCTGGCTG 1941 Query 1998 AAGCCA-GAGATATATTCCATACAATACCTTACGAGCCATCAAGTGCTATGTGTGCTACT 2056 |||||| || | ||||||| | |||||||||||||||| ||||||| |||||||||||| Sbjct 1942 AAGCCAGGA-AGATATTCCGCAAAATACCTTACGAGCCAACAAGTGCCATGTGTGCTACT 2000 Query 2057 CTACTGAAAGCGTGCCTCATCCACGGGAACACAAACATTGGGGAGTGGGCTGCAGATAAG 2116 ||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||| Sbjct 2001 ATACTGAAAGCGTGTCTCATCCACGGGAACACAGACATTGGTAAATGGGCTGCAGATAAG 2060 Query 2117 TTACTACTAGAAACAAAGCCAGAACACTTAGGTCACTATATGTTGCTTGCAGATATGTAT 2176 ||||||| || || ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2061 CTACTACTGGAGACGAAGCCAGAACACTTAGGGCACTATATGTTGCTTGCAGATATGTAT 2120 Query 2177 GCAGTAACTGGTTCTTGGAGCAAGCTTGTAACGGTGAAGACTTTACTGAGTGACTTGGGC 2236 ||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 2121 GCAGTTACTGGTTCTTGGAACAAGCTTGTAACGGTGAAGACTTTCCTGAGTGACTTGGGT 2180 Query 2237 GTGCAAAAGGCTCATGAGTTTGCTTTGATGGAAACAGATT-CGGAGTTAGATGGAGAGAA 2295 |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| Sbjct 2181 GTGCAAAAGGCTCATGAGTTTGCTTTGATGGAAACAGATTCCGG-GTTAGATGAAGAGAT 2239 Query 2296 TAATAAGCCGATGAACGATGATTCTGTCATCAATCAGGAGCAAAGTTCAGATGAAGAACG 2355 |||||||||||||| | ||||| | | | ||||||||||||||||||||||||||||| Sbjct 2240 TAATAAGCCGATGATC---GATTCCGCCGTTAATCAGGAGCAAAGTTCAGATGAAGAACG 2296 Query 2356 TCTTGTAGAAGTAGGATAAAGAATCAAAT-TCTGATAGAA 2394 ||||||||||||||||||||||||||| | |||||||||| Sbjct 2297 TCTTGTAGAAGTAGGATAAAGAATCAA-TGTCTGATAGAA 2335 Score = 1546 bits (837), Expect = 0.0 Identities = 1082/1195 (91%), Gaps = 37/1195 (3%) Strand=Plus/Plus Query 1 AACCTTCACGCGCGGCTACTCCTACTTTCGCTTCGTCCGGTTCCGTCGATACTGTCTCCG 60 ||||||||||||||||| |||||||| |||||||||||||||| |||| | ||||||||| Sbjct 1 AACCTTCACGCGCGGCTTCTCCTACTGTCGCTTCGTCCGGTTCTGTCGGTGCTGTCTCCG 60 Query 61 AATCACTGTCTTCTTTCCTTTTTCTTCCTACATGACATCTGTCTTATCTCTTTTATGTTT 120 |||||||| || || |||||||| | | ||||||| |||||| ||||||| Sbjct 61 AATCACTG---TC-TT--TTTTTCTT--T---T---TTCTGTCTCGTCTCTTCTATGTTT 106 Query 121 CTCTAGATGTACTTATACTTCCATGTTTCGTCTG-TATACGACGGAGAAGCAAAATT-GC 178 | ||||||||||| ||||||||||||| | ||| || | ||||||||||| ||||| | Sbjct 107 CACTAGATGTACTCATACTTCCATGTTAAGCCTGTTA-ATGACGGAGAAGCGAAATTGGA 165 Query 179 TTGAACTTTCGCTTTGATGGATCAAACTAGTCTTGGAACAATAATCAAAATCCATTC--- 235 || |||||||||||| ||||||||||||||| |||||| ||||||||||| |||||| Sbjct 166 TT-AACTTTCGCTTTCATGGATCAAACTAGTGTTGGAAGAATAATCAAAACCCATTCTTT 224 Query 236 GTTGCCATCATATGCAGCTTACTGTATATGCCGTCTTCTCCTTCTCGCTCTATACTCAGA 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 225 GTTGCCATCATATGCAGCTTACTGTATATGCCGTCTTCTCCTTCTCGCTCTATACTCAGA 284 Query 296 GGTCTCACTGTATCCGAAATTTGCAAGTTTATTCCTCAATCGTGGAAACAGCTGCCGAGA 355 ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||| Sbjct 285 GGTCTCACTGTATCCGAAATTCGCAAGTTTATTCCTCAATCTTGGAAACAGCCACCGAGA 344 Query 356 CCCATCTCAGAAACTTCC-AAAACCCATGATGATGAATCAGTTCCACAAGTGCTTTTC-A 413 |||||||| |||||| || |||||||||||||| | |||||||||||||| |||||| | Sbjct 345 CCCATCTCTGAAACT-CCTAAAACCCATGATGA--A-TCAGTTCCACAAGTTCTTTTCGA 400 Query 414 ATTCATTTAGACATTGCATTTCCCATGGTCAATTATATGAAGCTTTCAGAACTTTCTCTC 473 || ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||| Sbjct 401 AT-CATTTAGACATTGCATTGCCCATGGTCAATTTTATGAAGCTTTCAGAAATTTCTCTC 459 Query 474 TACTTCGCTACCAGTCTGGTTCTCATGAATTCGTTTTGTATTCATCAGCTTCTCTTCTAT 533 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 460 TACTTCGTTACCAGTCTGGTTCTCATGAATTCGTTTTGTATTCAGCAGCTTCTCTTTTAT 519 Query 534 CTACATGTGTGGGTTTTAATGAGTTTGTTCCTGGCCAGCAACTTCATGCTCATTGTATCT 593 |||| ||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| Sbjct 520 CTACCTGTGTGGGTTTTAGTGAGTTTGTTCCTGGGCAGCAAATTCATGCTCATTGTATCT 579 Query 594 CGTCGGGTTTGGAGTTTGACTCTGTTTTGGTCCCAAAGTTGGTCACTTTCTACTCTGCTT 653 | ||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 580 CCTCGGGTTTGGATTTTGACCCTGTTTTGGTCCCAAAGTTGGTTACTTTCTACTCTGCTT 639 Query 654 TTAATCTCCTTGACGAAGCTCAGACCATTACTGAGAACTCTGAGATTTTGCATCCCTTGC 713 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 640 TTAATCTTCTTGACGAAGCTCAGACCATTACTGAGAACTCTGACATTTTGCATCCCTTGC 699 Query 714 CGTGGAATGTGCTCATCGGTTCGTATATTAGGAACAAAAGGTTTCAGGAGTCTGTTTCTG 773 ||||||||||||| || | ||||||| ||||||| ||| ||||| | ||||| ||||||| Sbjct 700 CGTGGAATGTGCTTATTGATTCGTATGTTAGGAATAAACGGTTTGAAGAGTCGGTTTCTG 759 Query 774 TTTACAAGCGAATGATGAGTAAAGGAATT-AGAGCGGATGAATTTACTTACCCGTCTGTT 832 ||||||||||||||||||||||||||||| | | |||||||||| ||||| ||||||||| Sbjct 760 TTTACAAGCGAATGATGAGTAAAGGAATTCA-ACCGGATGAATTCACTTATCCGTCTGTT 818 Query 833 ATCAAGGCTTGTGCAGCATTACTGGATTTTGCATATGGGAGAGTTGTTCATGGCTCTATT 892 |||| ||||||| |||||||||||||||||||||||||||||| |||||||||||| || Sbjct 819 CTCAAAGCTTGTGGAGCATTACTGGATTTTGCATATGGGAGAGTGGTTCATGGCTCTGTT 878 Query 893 GAGGTTAGCTCTCACAGGTGTAACTTGTATGTCTGCAACGCGTTGATATCTATGTATAAA 952 |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| Sbjct 879 GAGGTTAGCTCTCACAGGTGCAGCTTGTATGTCTGCAATGCGTTGATATCTATGTATAAA 938 Query 953 AGATTTGGTAAAGTGGATGTTGCTCGGAGATTGTTTGACAGGATGTCTGAAAGGGATGCT 1012 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 939 AGATTTGGTAAAGTGGATGTTGCTCGGAAATTGTTTGACAGGATGTCTGAAAGGGATGCT 998 Query 1013 GTCTCATGGAATGCAATAATCAACTGTTATACTTCAGAAGAAAAGTTAGGGGAAGCTTTT 1072 ||||||||||||||| |||| |||||| ||||||| |||| | || | | |||||||| Sbjct 999 GTCTCATGGAATGCAGTAATTAACTGT-ATACTTCTGAAGGAC--TTCGAG-AAGCTTTT 1054 Query 1073 AAGCTTCTTGATAG-AATGTATCTCTCTGGTGTCGAAGCGAGTATTGTAACTTGGAACAC 1131 |||||| |||||| || ||| |||||||||||||||||||||||||||||||||||||| Sbjct 1055 AAGCTTTTTGATATTAA-GTA-CTCTCTGGTGTCGAAGCGAGTATTGTAACTTGGAACAC 1112 Query 1132 AATAGCTGGAGGTTGTTTGGAGGCAGGAAATTACATAGGGGCTTTGAATTGTGTT 1186 | ||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1113 ATTAGCTGGAGGTTGTTTGCAGGCAGGAAATTACGTAGGGGCTTTGAATTGTGTT 1167 > Ahg476279 jgi|Araly1|476279|fgenesh2_kg.2__1409__AT1G71490.1 Length=2721 Score = 1003 bits (543), Expect = 0.0 Identities = 1366/1757 (78%), Gaps = 81/1757 (5%) Strand=Plus/Plus Query 557 TTTGTTCCTGGCCAGCAACTTCATGCTCATTGTATCTCGTCGGGTTTGGAGTTTGACTCT 616 ||||| || || | |||| |||| ||||| ||| | ||||| ||| |||| | | ||||| Sbjct 421 TTTGTGCCGGGGCTGCAAATTCACGCTCACTGTGTTTCGTCCGGTGTGGAATATCACTCT 480 Query 617 GTTTTGGTCCCAAAGTTGGTCACTTTCTACTCTGCTTTTAATC-TC-CTTGACGAAGCTC 674 | ||||||||||||| |||| ||||| |||||||||||||||| || | | ||||||| Sbjct 481 GCTTTGGTCCCAAAGCTGGTTACTTTTTACTCTGCTTTTAATCTTCAC-AG-GGAAGCTC 538 Query 675 AGA-CCATTACTGAGAACTCTGAGATTTTGCATCCCTTGCCGTGGAATGTGCTCATCGGT 733 | | | |||| ||||||||| || |||||||||||||| || |||||||||||||| | | Sbjct 539 A-ATCGATTAATGAGAACTCAGATATTTTGCATCCCTTACCTTGGAATGTGCTCATTGCT 597 Query 734 TCGTATATTAGGAACAAAAGGTTTCAGGA-GTCTGTTTCTGTTTACAAGCGAATGATGAG 792 |||||| | |||| | ||| |||| || |||| ||| ||||||| ||||| |||| Sbjct 598 TCGTATGCCAAGAACGAGCTTTTTGAGGAGGT-TGTTGCTGCTTACAAGAGAATGGTGAG 656 Query 793 TAAAGGAATTAGAGCGGATGAATTTACTTACCCGTCTGTTATCAAGGCTTGTGCAGCATT 852 || |||||| || | |||| || ||||| ||||||||| ||||||| |||| | | Sbjct 657 CAAGGGAATTCGACCCGATGCCTTCACTTATCCGTCTGTTCTCAAGGCCTGTGGTGAAAC 716 Query 853 ACTGGATTTTGCATATGGGAGAGTTGTTCATGGCTCTATTGAGGTTAGCTCTCACAGGTG 912 ||| || |||| | ||| ||||| |||||||| || || |||||||||||| ||| ||| Sbjct 717 ACTTGACGTTGCCTCTGGAAGAGTGGTTCATGGTTCCATCGAGGTTAGCTCTTACAAGTG 776 Query 913 TAACTTGTATGTCTGCAACGCGTTGATATCTATGTATAAAAGATTTGGTAAA-GTGGATG 971 | ||||||||| ||||| || ||||| |||||||||||||| ||||| ||| |||| | Sbjct 777 CAGCTTGTATGTTTGCAATGCATTGATCTCTATGTATAAAAGGTTTGG-AAATGTGGGTA 835 Query 972 TTGCTCGGAGATTGTTTGA-CAGGATGTCTGAAAGGGATGCTGTCTCATGGAATGCAATA 1030 |||||||||| |||||||| || ||||||||||||||||||||||||||||||||| | Sbjct 836 TTGCTCGGAGGTTGTTTGATCA-TATGTCTGAAAGGGATGCTGTCTCATGGAATGCAGTT 894 Query 1031 ATCAACTGTTATACTTCAGAAGAAAAGTT-AGGGGAAGCTTTTAAGCTTCTTGATAGAAT 1089 || |||||||||||||| | || | || || | |||| ||| ||||| |||||| ||| Sbjct 895 ATAAACTGTTATACTTCGGTAGGCATGTGGAGTG-AAGCGTTTGAGCTTTTTGATAAAAT 953 Query 1090 GTATCT-CTCTGGTGTCGAAG-CGAGTATTGTAACTTGGAACACAATAGCTGGAGGTTGT 1147 | | | ||| ||||| ||| | ||| | |||||||||| | || ||||||||| | Sbjct 954 G-AGGTTCTCAGGTGTTGAATTC-AGTGTCATAACTTGGAATATTATTTCTGGAGGTTAT 1011 Query 1148 TTGGAGGCAGGAAATTACATAGGGGCTTTGAATTGTGTTGT-TGGGATGAGAAATTGCA- 1205 ||| | ||||||| || ||| |||||| || || | | | |||||||||||| | Sbjct 1012 TTGCATACAGGAAACTATGCAGGAGCTTTGGGTT-TGATCTCTAGGATGAGAAATTTCCC 1070 Query 1206 -ATGTAAGAATAGGTTCTGTAGCTATGATTAATGGTTTAAAGGCATGCTCACACATTGGA 1264 | | | | ||| | |||| |||||||||| |||||| ||||| ||||||| ||| ||| Sbjct 1071 CACG-A-GCTTAGATCCTGTGGCTATGATTATTGGTTTGAAGGCTTGCTCACTCATAGGA 1128 Query 1265 GCGTTAA-AGTGGGGGAA-AGTATTTCATTGCCTTG-TGATCCGTAGTTGTAGTTTTTCC 1321 || || | |||| || || ||| || | |||| | || | | || | || | Sbjct 1129 GCAATACGATTGGGAAAAGAG-ATT-CACGGTCTTGCT-ATTC--ACC-GT--TCTTACG 1180 Query 1322 CATGATATTGACAATGTTCGGAATTCGTTGATCACAATGTACTCAAGATGC-AGTGATCT 1380 ||| |||||||||||||| || ||||||||||||||||||||| |||| | ||| || Sbjct 1181 -ATGGGATTGACAATGTTCGAAACACGTTGATCACAATGTACTCAAAATGCGA-TGACCT 1238 Query 1381 TAGGCACGCGTTTATAGTGTTTCAGCAGGTTGAAGCAAATAGTTTGAGTACATGGAATTC 1440 |||| |||| |||||||||||||| || ||||| |||||||||| |||| ||||| || Sbjct 1239 TAGGAACGCCTTTATAGTGTTTCAAAAGACTGAAGAAAATAGTTTGTGTACTTGGAACTC 1298 Query 1441 TATCATTTCCGGTTTTGCATACAAC-GAG-AGATCAGAAGAAACCTCTTTCCTGCTCAAG 1498 ||| |||||||||| ||| ||| || | |||||||||| |||||| |||||| | | Sbjct 1299 TATTATTTCCGGTTATGCG--CAAGTGAATAAATCAGAAGAAGCCTCTTACCTGCTGAGG 1356 Query 1499 GAGATGTTGCTCT-CTGGATTTCACCCAAATCACATTACGCTTGCTAGCATTCTCCCTCT 1557 ||||||||||| | |||| ||||| |||||| |||||| ||||| |||||||||||||| Sbjct 1357 GAGATGTTGCT-TGCTGGCTTTCAGCCAAATTTCATTACACTTGCAAGCATTCTCCCTCT 1415 Query 1558 TTTTGCTCGGGTGGGAAACCTGCAACATGGGAAAGAGTTTCACTGCTACATCCTGAGACG 1617 || ||||||| | | ||||||||||||||| ||||||||||| |||||||||||||| || Sbjct 1416 TTGTGCTCGGATTGCAAACCTGCAACATGGAAAAGAGTTTCATTGCTACATCCTGAGGCG 1475 Query 1618 CCAAA-GCTACAAGGACTGTTTAATCCTGTGGAACTCCCTTGTCGATATGTATGCAAAAT 1676 | || ||| |||||||| | ||| ||||||||||||||||| ||| | |||||||||| Sbjct 1476 C-AAGTGCTTCAAGGACTATACAATGCTGTGGAACTCCCTTGTTGATGTTTATGCAAAAT 1534 Query 1677 CCGGTGAAATCATAGCTGCAAAGCGAGTATTTGAT-TCGATGAG-GAAGAGGGACAAAGT 1734 | || |||| ||||||| |||| ||||| | || | |||||| ||| | ||| |||| Sbjct 1535 CAGGAAAAATTGTAGCTGCGAAGCAAGTATCTAATCT-GATGAGCGAA-ATAGACGAAGT 1592 Query 1735 GACATACACTTCTTTGATCGATGGATATGGCAGGCTGGGTAAAGGA-GAAGTCGCATTGG 1793 || |||||||| ||||| |||||||| || | | |||| |||| || || || |||| Sbjct 1593 AACGTACACTTCCTTGATAGATGGATACGGAAATCAGGGTGAAGGGCGA-GTTGCCTTGG 1651 Query 1794 CA-TGGTTCAAGGATATGGA-CAGATCCGGTATCAAACCTGATCATGTAACTATGGTTGC 1851 | || ||| | || ||| | |||||| ||||| |||||||| | |||||| |||||||| Sbjct 1652 CCCTG-TTCGACGAGATG-ATCAGATCTGGTATTAAACCTGACCCTGTAACCATGGTTGC 1709 Query 1852 AGTTTTATCAGCTTGCAGCCATTCCAATTTAGTGCGTGAAGGACACTGGTTGTTTACGAA 1911 |||| | ||||| ||||| |||||||| ||||| | |||||| || || | |||| ||| Sbjct 1710 AGTTCTGTCAGCCTGCAGTCATTCCAAGTTAGTCCATGAAGGCCAAAGGCTATTTATGAA 1769 Query 1912 GATGGAGCATGTGTTTGGTATACG-CCTTCGCCTTGAACACTATTCTTGTATGGTTGATC 1970 |||| ||| | || ||||||||| |||| | ||| |||||| ||||||||||||||||| Sbjct 1770 GATGCAGCCTAAGTATGGTATACGGCCTT-GTCTTCAACACTTTTCTTGTATGGTTGATC 1828 Query 1971 TTTATTGCAGAGCAGGTTACCTGGATAAAGCCAGAGATATA-TTCCATACAATACCTTAC 2029 | ||| ||||||| |||| ||| | ||||||| ||| ||| ||| | | ||| || | Sbjct 1829 TCTATGGCAGAGCGGGTTTCCTAGCGAAAGCCAAAGACATAATTC-ACAGAATGCCACAT 1887 Query 2030 GAGCCATCAAGTGCTATGTGTGCTACTCTACTGAAAGCGTGCCTCATCCACGGGAACACA 2089 |||||||| |||| | || || ||||||||||| || || | |||||||||||||||| Sbjct 1888 GAGCCATCCGGTGCCACATGGGCAACTCTACTGAACGCTTGTCACATCCACGGGAACACA 1947 Query 2090 AACATTGGGGAGTGGGCTGCAGATAAG-TTACTACTAGAAACAAAGCCAGA-ACACTTAG 2147 | ||||| | ||||||||||| ||| || | | || | |||||||| | || | Sbjct 1948 GAGATTGGTAAATGGGCTGCAGAAAAGCTT--T--TGGAGATGAAGCCAGAGA-ACCCGG 2002 Query 2148 G-TCACTATATGTTGCTTGCAGATATGTATGCAG-TAACTGGTTCTTGGAGCAAGCTTG- 2204 | | ||||| | ||| ||||| ||||||||||| | ||||||||||||||||||||| Sbjct 2003 GAT-ACTATGTATTGATTGCAAATATGTATGCAACTG-CTGGTTCTTGGAGCAAGCTTGC 2060 Query 2205 T-AACGGTGAAGACTTT-ACTGAGTGACTTGGGCGTGC-AAAAGGCTCATGAGTTTGCTT 2261 | || | ||| |||| | | |||| |||||||| ||| ||||| || || || ||||| Sbjct 2061 TGAA-G-TGAGGACTATCA-TGAGGGACTTGGGTGTGAGAAAAGA-TCCTGGGTGTGCTT 2116 Query 2262 TGATGGAA-ACAGATTC 2277 ||| || |||||||| Sbjct 2117 GGATC-AATACAGATTC 2132 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91683219715 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5