BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G22830.1
Length=2433
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472526 jgi|Araly1|472526|fgenesh2_kg.1__2480__AT1G22830.1 1714 0.0
Ahg476279 jgi|Araly1|476279|fgenesh2_kg.2__1409__AT1G71490.1 1003 0.0
> Ahg472526 jgi|Araly1|472526|fgenesh2_kg.1__2480__AT1G22830.1
Length=2335
Score = 1714 bits (928), Expect = 0.0
Identities = 1099/1180 (93%), Gaps = 17/1180 (1%)
Strand=Plus/Plus
Query 1219 TTCTGTAGCTATGATTAATGGTTTAAAGGCATGCTCACACATTGGAGCGTTAAAGTGGGG 1278
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1169 TTCTGTAGCTATGATTAATGGTTTAAAGGCATGCTCACACATTGGAGCGTTACAGTGGGG 1228
Query 1279 GAAAGTATTTCATTGCCTTGTGATCCGTAGTTGTAGTTTTTCCCATGATATTGACAATGT 1338
||||||||||||||||||||||||||||| | | | || |||||| |||||||||||
Sbjct 1229 AAAAGTATTTCATTGCCTTGTGATCCGTAG-T-T-G---TTGCCATGAAATTGACAATGT 1282
Query 1339 TCGGAATTCGTTGATCACAATGTACTCAAGATGCAGTGATCTTAGGCACGCGTTTATAGT 1398
||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1283 TCGAAATTCGTTGATTACAATGTACTCAAGATGCAGCGATCTTAGGCACGCCTTTATAGT 1342
Query 1399 GTTTCAGCAGGTTGAAGCAAATAGTTTGAGTACATGGAATTCTATCATTTCCGGTTTTGC 1458
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1343 GTTTCAGCAGATTGAAGCAAATAGTTTGAGTACATGGAATTCTATCATTTCCGGTTATGC 1402
Query 1459 ATACAACGAGAGATCAGAAGAAACCTCTTTCCTGCTCAAGGAGATGTTGCTCTCTGGATT 1518
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1403 ACACAACGAGAGATCAGAAGAAACCTCTTTCCTGCTCAAGGAGATGTTGCTCTCTGGCTT 1462
Query 1519 TCACCCAAATCACATTACGCTTGCTAGCATTCTCCCTCTTTTTGCTCGGGTGGGAAACCT 1578
|||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1463 TCACCCAAATTACATTACGCTTGCTAGCATTCTCCCTCTTTGTGCTCGGGTGGCAAACCT 1522
Query 1579 GCAACATGGGAAAGAGTTTCACTGCTACATCCTGAGACGCCAAAGCTACAAGGACTGTTT 1638
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1523 GCAACACGGGAAAGAGTTTCACTGCTACATCCTGAGGCGCCAAAGCTACAAGGACTGTTT 1582
Query 1639 AATCCTGTGGAACTCCCTTGTCGATATGTATGCAAAATCCGGTGAAATCATAGCTGCAAA 1698
||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1583 AATCCTGTGGAACTCTCTTGTCGATATGTATGCAAAATCTGGGGAAATCATAGCTGCAAA 1642
Query 1699 GCGAGTATTTGATTCGATGAGGAAGAGGGACAAAGTGACATACACTTCTTTGATCGATGG 1758
||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 1643 GCGAGTATTTGATTCGATGAGCAAGAGGGACAAAGTGACATACACTTCCTTGATAGATGG 1702
Query 1759 ATATGGCAGGCTGGGTAAAGGAGAAGTCGCATTGGCATGGTTCAAGGATATGGACAGATC 1818
|||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||
Sbjct 1703 ATATGGCAGGCTGGGTAAAGGAGAAGTCTCCTTGGCATGGTTCAAGGATATGAACAGATC 1762
Query 1819 CGGTATCAAACCTGATCATGTAACTATGGTTGCAGTTTTATCAGCTTGCAGCCATTCCAA 1878
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 1763 CGGTATCAAACCTGATCATGTAACTTTGGTTGCTGTTTTATCAGCTTGCAGCCATTCCAA 1822
Query 1879 TTTAGTGCGTGAAGGACACTGGTTGTTTACGAAGATGGAGCA-TGTGTTTGGTATACGCC 1937
|||||||| |||||||||| |||||||||||||||||||| | || ||||||||||||||
Sbjct 1823 TTTAGTGCATGAAGGACACAGGTTGTTTACGAAGATGGAG-ACTGGGTTTGGTATACGCC 1881
Query 1938 TTCGCCTTGAACACTATTCTTGTATGGTTGATCTTTATTGCAGAGCAGGTTACCTGGATA 1997
|||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |
Sbjct 1882 CTCGCCTTGAACACTATTCTTGTATGGTTGATCTTTATTGCAGAGTAGGTGACCTGGCTG 1941
Query 1998 AAGCCA-GAGATATATTCCATACAATACCTTACGAGCCATCAAGTGCTATGTGTGCTACT 2056
|||||| || | ||||||| | |||||||||||||||| ||||||| ||||||||||||
Sbjct 1942 AAGCCAGGA-AGATATTCCGCAAAATACCTTACGAGCCAACAAGTGCCATGTGTGCTACT 2000
Query 2057 CTACTGAAAGCGTGCCTCATCCACGGGAACACAAACATTGGGGAGTGGGCTGCAGATAAG 2116
||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||
Sbjct 2001 ATACTGAAAGCGTGTCTCATCCACGGGAACACAGACATTGGTAAATGGGCTGCAGATAAG 2060
Query 2117 TTACTACTAGAAACAAAGCCAGAACACTTAGGTCACTATATGTTGCTTGCAGATATGTAT 2176
||||||| || || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2061 CTACTACTGGAGACGAAGCCAGAACACTTAGGGCACTATATGTTGCTTGCAGATATGTAT 2120
Query 2177 GCAGTAACTGGTTCTTGGAGCAAGCTTGTAACGGTGAAGACTTTACTGAGTGACTTGGGC 2236
||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 2121 GCAGTTACTGGTTCTTGGAACAAGCTTGTAACGGTGAAGACTTTCCTGAGTGACTTGGGT 2180
Query 2237 GTGCAAAAGGCTCATGAGTTTGCTTTGATGGAAACAGATT-CGGAGTTAGATGGAGAGAA 2295
|||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||
Sbjct 2181 GTGCAAAAGGCTCATGAGTTTGCTTTGATGGAAACAGATTCCGG-GTTAGATGAAGAGAT 2239
Query 2296 TAATAAGCCGATGAACGATGATTCTGTCATCAATCAGGAGCAAAGTTCAGATGAAGAACG 2355
|||||||||||||| | ||||| | | | |||||||||||||||||||||||||||||
Sbjct 2240 TAATAAGCCGATGATC---GATTCCGCCGTTAATCAGGAGCAAAGTTCAGATGAAGAACG 2296
Query 2356 TCTTGTAGAAGTAGGATAAAGAATCAAAT-TCTGATAGAA 2394
||||||||||||||||||||||||||| | ||||||||||
Sbjct 2297 TCTTGTAGAAGTAGGATAAAGAATCAA-TGTCTGATAGAA 2335
Score = 1546 bits (837), Expect = 0.0
Identities = 1082/1195 (91%), Gaps = 37/1195 (3%)
Strand=Plus/Plus
Query 1 AACCTTCACGCGCGGCTACTCCTACTTTCGCTTCGTCCGGTTCCGTCGATACTGTCTCCG 60
||||||||||||||||| |||||||| |||||||||||||||| |||| | |||||||||
Sbjct 1 AACCTTCACGCGCGGCTTCTCCTACTGTCGCTTCGTCCGGTTCTGTCGGTGCTGTCTCCG 60
Query 61 AATCACTGTCTTCTTTCCTTTTTCTTCCTACATGACATCTGTCTTATCTCTTTTATGTTT 120
|||||||| || || |||||||| | | ||||||| |||||| |||||||
Sbjct 61 AATCACTG---TC-TT--TTTTTCTT--T---T---TTCTGTCTCGTCTCTTCTATGTTT 106
Query 121 CTCTAGATGTACTTATACTTCCATGTTTCGTCTG-TATACGACGGAGAAGCAAAATT-GC 178
| ||||||||||| ||||||||||||| | ||| || | ||||||||||| ||||| |
Sbjct 107 CACTAGATGTACTCATACTTCCATGTTAAGCCTGTTA-ATGACGGAGAAGCGAAATTGGA 165
Query 179 TTGAACTTTCGCTTTGATGGATCAAACTAGTCTTGGAACAATAATCAAAATCCATTC--- 235
|| |||||||||||| ||||||||||||||| |||||| ||||||||||| ||||||
Sbjct 166 TT-AACTTTCGCTTTCATGGATCAAACTAGTGTTGGAAGAATAATCAAAACCCATTCTTT 224
Query 236 GTTGCCATCATATGCAGCTTACTGTATATGCCGTCTTCTCCTTCTCGCTCTATACTCAGA 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225 GTTGCCATCATATGCAGCTTACTGTATATGCCGTCTTCTCCTTCTCGCTCTATACTCAGA 284
Query 296 GGTCTCACTGTATCCGAAATTTGCAAGTTTATTCCTCAATCGTGGAAACAGCTGCCGAGA 355
||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||
Sbjct 285 GGTCTCACTGTATCCGAAATTCGCAAGTTTATTCCTCAATCTTGGAAACAGCCACCGAGA 344
Query 356 CCCATCTCAGAAACTTCC-AAAACCCATGATGATGAATCAGTTCCACAAGTGCTTTTC-A 413
|||||||| |||||| || |||||||||||||| | |||||||||||||| |||||| |
Sbjct 345 CCCATCTCTGAAACT-CCTAAAACCCATGATGA--A-TCAGTTCCACAAGTTCTTTTCGA 400
Query 414 ATTCATTTAGACATTGCATTTCCCATGGTCAATTATATGAAGCTTTCAGAACTTTCTCTC 473
|| ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||
Sbjct 401 AT-CATTTAGACATTGCATTGCCCATGGTCAATTTTATGAAGCTTTCAGAAATTTCTCTC 459
Query 474 TACTTCGCTACCAGTCTGGTTCTCATGAATTCGTTTTGTATTCATCAGCTTCTCTTCTAT 533
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 460 TACTTCGTTACCAGTCTGGTTCTCATGAATTCGTTTTGTATTCAGCAGCTTCTCTTTTAT 519
Query 534 CTACATGTGTGGGTTTTAATGAGTTTGTTCCTGGCCAGCAACTTCATGCTCATTGTATCT 593
|||| ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||
Sbjct 520 CTACCTGTGTGGGTTTTAGTGAGTTTGTTCCTGGGCAGCAAATTCATGCTCATTGTATCT 579
Query 594 CGTCGGGTTTGGAGTTTGACTCTGTTTTGGTCCCAAAGTTGGTCACTTTCTACTCTGCTT 653
| ||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 580 CCTCGGGTTTGGATTTTGACCCTGTTTTGGTCCCAAAGTTGGTTACTTTCTACTCTGCTT 639
Query 654 TTAATCTCCTTGACGAAGCTCAGACCATTACTGAGAACTCTGAGATTTTGCATCCCTTGC 713
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 640 TTAATCTTCTTGACGAAGCTCAGACCATTACTGAGAACTCTGACATTTTGCATCCCTTGC 699
Query 714 CGTGGAATGTGCTCATCGGTTCGTATATTAGGAACAAAAGGTTTCAGGAGTCTGTTTCTG 773
||||||||||||| || | ||||||| ||||||| ||| ||||| | ||||| |||||||
Sbjct 700 CGTGGAATGTGCTTATTGATTCGTATGTTAGGAATAAACGGTTTGAAGAGTCGGTTTCTG 759
Query 774 TTTACAAGCGAATGATGAGTAAAGGAATT-AGAGCGGATGAATTTACTTACCCGTCTGTT 832
||||||||||||||||||||||||||||| | | |||||||||| ||||| |||||||||
Sbjct 760 TTTACAAGCGAATGATGAGTAAAGGAATTCA-ACCGGATGAATTCACTTATCCGTCTGTT 818
Query 833 ATCAAGGCTTGTGCAGCATTACTGGATTTTGCATATGGGAGAGTTGTTCATGGCTCTATT 892
|||| ||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 819 CTCAAAGCTTGTGGAGCATTACTGGATTTTGCATATGGGAGAGTGGTTCATGGCTCTGTT 878
Query 893 GAGGTTAGCTCTCACAGGTGTAACTTGTATGTCTGCAACGCGTTGATATCTATGTATAAA 952
|||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||
Sbjct 879 GAGGTTAGCTCTCACAGGTGCAGCTTGTATGTCTGCAATGCGTTGATATCTATGTATAAA 938
Query 953 AGATTTGGTAAAGTGGATGTTGCTCGGAGATTGTTTGACAGGATGTCTGAAAGGGATGCT 1012
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 939 AGATTTGGTAAAGTGGATGTTGCTCGGAAATTGTTTGACAGGATGTCTGAAAGGGATGCT 998
Query 1013 GTCTCATGGAATGCAATAATCAACTGTTATACTTCAGAAGAAAAGTTAGGGGAAGCTTTT 1072
||||||||||||||| |||| |||||| ||||||| |||| | || | | ||||||||
Sbjct 999 GTCTCATGGAATGCAGTAATTAACTGT-ATACTTCTGAAGGAC--TTCGAG-AAGCTTTT 1054
Query 1073 AAGCTTCTTGATAG-AATGTATCTCTCTGGTGTCGAAGCGAGTATTGTAACTTGGAACAC 1131
|||||| |||||| || ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1055 AAGCTTTTTGATATTAA-GTA-CTCTCTGGTGTCGAAGCGAGTATTGTAACTTGGAACAC 1112
Query 1132 AATAGCTGGAGGTTGTTTGGAGGCAGGAAATTACATAGGGGCTTTGAATTGTGTT 1186
| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1113 ATTAGCTGGAGGTTGTTTGCAGGCAGGAAATTACGTAGGGGCTTTGAATTGTGTT 1167
> Ahg476279 jgi|Araly1|476279|fgenesh2_kg.2__1409__AT1G71490.1
Length=2721
Score = 1003 bits (543), Expect = 0.0
Identities = 1366/1757 (78%), Gaps = 81/1757 (5%)
Strand=Plus/Plus
Query 557 TTTGTTCCTGGCCAGCAACTTCATGCTCATTGTATCTCGTCGGGTTTGGAGTTTGACTCT 616
||||| || || | |||| |||| ||||| ||| | ||||| ||| |||| | | |||||
Sbjct 421 TTTGTGCCGGGGCTGCAAATTCACGCTCACTGTGTTTCGTCCGGTGTGGAATATCACTCT 480
Query 617 GTTTTGGTCCCAAAGTTGGTCACTTTCTACTCTGCTTTTAATC-TC-CTTGACGAAGCTC 674
| ||||||||||||| |||| ||||| |||||||||||||||| || | | |||||||
Sbjct 481 GCTTTGGTCCCAAAGCTGGTTACTTTTTACTCTGCTTTTAATCTTCAC-AG-GGAAGCTC 538
Query 675 AGA-CCATTACTGAGAACTCTGAGATTTTGCATCCCTTGCCGTGGAATGTGCTCATCGGT 733
| | | |||| ||||||||| || |||||||||||||| || |||||||||||||| | |
Sbjct 539 A-ATCGATTAATGAGAACTCAGATATTTTGCATCCCTTACCTTGGAATGTGCTCATTGCT 597
Query 734 TCGTATATTAGGAACAAAAGGTTTCAGGA-GTCTGTTTCTGTTTACAAGCGAATGATGAG 792
|||||| | |||| | ||| |||| || |||| ||| ||||||| ||||| ||||
Sbjct 598 TCGTATGCCAAGAACGAGCTTTTTGAGGAGGT-TGTTGCTGCTTACAAGAGAATGGTGAG 656
Query 793 TAAAGGAATTAGAGCGGATGAATTTACTTACCCGTCTGTTATCAAGGCTTGTGCAGCATT 852
|| |||||| || | |||| || ||||| ||||||||| ||||||| |||| | |
Sbjct 657 CAAGGGAATTCGACCCGATGCCTTCACTTATCCGTCTGTTCTCAAGGCCTGTGGTGAAAC 716
Query 853 ACTGGATTTTGCATATGGGAGAGTTGTTCATGGCTCTATTGAGGTTAGCTCTCACAGGTG 912
||| || |||| | ||| ||||| |||||||| || || |||||||||||| ||| |||
Sbjct 717 ACTTGACGTTGCCTCTGGAAGAGTGGTTCATGGTTCCATCGAGGTTAGCTCTTACAAGTG 776
Query 913 TAACTTGTATGTCTGCAACGCGTTGATATCTATGTATAAAAGATTTGGTAAA-GTGGATG 971
| ||||||||| ||||| || ||||| |||||||||||||| ||||| ||| |||| |
Sbjct 777 CAGCTTGTATGTTTGCAATGCATTGATCTCTATGTATAAAAGGTTTGG-AAATGTGGGTA 835
Query 972 TTGCTCGGAGATTGTTTGA-CAGGATGTCTGAAAGGGATGCTGTCTCATGGAATGCAATA 1030
|||||||||| |||||||| || ||||||||||||||||||||||||||||||||| |
Sbjct 836 TTGCTCGGAGGTTGTTTGATCA-TATGTCTGAAAGGGATGCTGTCTCATGGAATGCAGTT 894
Query 1031 ATCAACTGTTATACTTCAGAAGAAAAGTT-AGGGGAAGCTTTTAAGCTTCTTGATAGAAT 1089
|| |||||||||||||| | || | || || | |||| ||| ||||| |||||| |||
Sbjct 895 ATAAACTGTTATACTTCGGTAGGCATGTGGAGTG-AAGCGTTTGAGCTTTTTGATAAAAT 953
Query 1090 GTATCT-CTCTGGTGTCGAAG-CGAGTATTGTAACTTGGAACACAATAGCTGGAGGTTGT 1147
| | | ||| ||||| ||| | ||| | |||||||||| | || ||||||||| |
Sbjct 954 G-AGGTTCTCAGGTGTTGAATTC-AGTGTCATAACTTGGAATATTATTTCTGGAGGTTAT 1011
Query 1148 TTGGAGGCAGGAAATTACATAGGGGCTTTGAATTGTGTTGT-TGGGATGAGAAATTGCA- 1205
||| | ||||||| || ||| |||||| || || | | | |||||||||||| |
Sbjct 1012 TTGCATACAGGAAACTATGCAGGAGCTTTGGGTT-TGATCTCTAGGATGAGAAATTTCCC 1070
Query 1206 -ATGTAAGAATAGGTTCTGTAGCTATGATTAATGGTTTAAAGGCATGCTCACACATTGGA 1264
| | | | ||| | |||| |||||||||| |||||| ||||| ||||||| ||| |||
Sbjct 1071 CACG-A-GCTTAGATCCTGTGGCTATGATTATTGGTTTGAAGGCTTGCTCACTCATAGGA 1128
Query 1265 GCGTTAA-AGTGGGGGAA-AGTATTTCATTGCCTTG-TGATCCGTAGTTGTAGTTTTTCC 1321
|| || | |||| || || ||| || | |||| | || | | || | || |
Sbjct 1129 GCAATACGATTGGGAAAAGAG-ATT-CACGGTCTTGCT-ATTC--ACC-GT--TCTTACG 1180
Query 1322 CATGATATTGACAATGTTCGGAATTCGTTGATCACAATGTACTCAAGATGC-AGTGATCT 1380
||| |||||||||||||| || ||||||||||||||||||||| |||| | ||| ||
Sbjct 1181 -ATGGGATTGACAATGTTCGAAACACGTTGATCACAATGTACTCAAAATGCGA-TGACCT 1238
Query 1381 TAGGCACGCGTTTATAGTGTTTCAGCAGGTTGAAGCAAATAGTTTGAGTACATGGAATTC 1440
|||| |||| |||||||||||||| || ||||| |||||||||| |||| ||||| ||
Sbjct 1239 TAGGAACGCCTTTATAGTGTTTCAAAAGACTGAAGAAAATAGTTTGTGTACTTGGAACTC 1298
Query 1441 TATCATTTCCGGTTTTGCATACAAC-GAG-AGATCAGAAGAAACCTCTTTCCTGCTCAAG 1498
||| |||||||||| ||| ||| || | |||||||||| |||||| |||||| | |
Sbjct 1299 TATTATTTCCGGTTATGCG--CAAGTGAATAAATCAGAAGAAGCCTCTTACCTGCTGAGG 1356
Query 1499 GAGATGTTGCTCT-CTGGATTTCACCCAAATCACATTACGCTTGCTAGCATTCTCCCTCT 1557
||||||||||| | |||| ||||| |||||| |||||| ||||| ||||||||||||||
Sbjct 1357 GAGATGTTGCT-TGCTGGCTTTCAGCCAAATTTCATTACACTTGCAAGCATTCTCCCTCT 1415
Query 1558 TTTTGCTCGGGTGGGAAACCTGCAACATGGGAAAGAGTTTCACTGCTACATCCTGAGACG 1617
|| ||||||| | | ||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 1416 TTGTGCTCGGATTGCAAACCTGCAACATGGAAAAGAGTTTCATTGCTACATCCTGAGGCG 1475
Query 1618 CCAAA-GCTACAAGGACTGTTTAATCCTGTGGAACTCCCTTGTCGATATGTATGCAAAAT 1676
| || ||| |||||||| | ||| ||||||||||||||||| ||| | ||||||||||
Sbjct 1476 C-AAGTGCTTCAAGGACTATACAATGCTGTGGAACTCCCTTGTTGATGTTTATGCAAAAT 1534
Query 1677 CCGGTGAAATCATAGCTGCAAAGCGAGTATTTGAT-TCGATGAG-GAAGAGGGACAAAGT 1734
| || |||| ||||||| |||| ||||| | || | |||||| ||| | ||| ||||
Sbjct 1535 CAGGAAAAATTGTAGCTGCGAAGCAAGTATCTAATCT-GATGAGCGAA-ATAGACGAAGT 1592
Query 1735 GACATACACTTCTTTGATCGATGGATATGGCAGGCTGGGTAAAGGA-GAAGTCGCATTGG 1793
|| |||||||| ||||| |||||||| || | | |||| |||| || || || ||||
Sbjct 1593 AACGTACACTTCCTTGATAGATGGATACGGAAATCAGGGTGAAGGGCGA-GTTGCCTTGG 1651
Query 1794 CA-TGGTTCAAGGATATGGA-CAGATCCGGTATCAAACCTGATCATGTAACTATGGTTGC 1851
| || ||| | || ||| | |||||| ||||| |||||||| | |||||| ||||||||
Sbjct 1652 CCCTG-TTCGACGAGATG-ATCAGATCTGGTATTAAACCTGACCCTGTAACCATGGTTGC 1709
Query 1852 AGTTTTATCAGCTTGCAGCCATTCCAATTTAGTGCGTGAAGGACACTGGTTGTTTACGAA 1911
|||| | ||||| ||||| |||||||| ||||| | |||||| || || | |||| |||
Sbjct 1710 AGTTCTGTCAGCCTGCAGTCATTCCAAGTTAGTCCATGAAGGCCAAAGGCTATTTATGAA 1769
Query 1912 GATGGAGCATGTGTTTGGTATACG-CCTTCGCCTTGAACACTATTCTTGTATGGTTGATC 1970
|||| ||| | || ||||||||| |||| | ||| |||||| |||||||||||||||||
Sbjct 1770 GATGCAGCCTAAGTATGGTATACGGCCTT-GTCTTCAACACTTTTCTTGTATGGTTGATC 1828
Query 1971 TTTATTGCAGAGCAGGTTACCTGGATAAAGCCAGAGATATA-TTCCATACAATACCTTAC 2029
| ||| ||||||| |||| ||| | ||||||| ||| ||| ||| | | ||| || |
Sbjct 1829 TCTATGGCAGAGCGGGTTTCCTAGCGAAAGCCAAAGACATAATTC-ACAGAATGCCACAT 1887
Query 2030 GAGCCATCAAGTGCTATGTGTGCTACTCTACTGAAAGCGTGCCTCATCCACGGGAACACA 2089
|||||||| |||| | || || ||||||||||| || || | ||||||||||||||||
Sbjct 1888 GAGCCATCCGGTGCCACATGGGCAACTCTACTGAACGCTTGTCACATCCACGGGAACACA 1947
Query 2090 AACATTGGGGAGTGGGCTGCAGATAAG-TTACTACTAGAAACAAAGCCAGA-ACACTTAG 2147
| ||||| | ||||||||||| ||| || | | || | |||||||| | || |
Sbjct 1948 GAGATTGGTAAATGGGCTGCAGAAAAGCTT--T--TGGAGATGAAGCCAGAGA-ACCCGG 2002
Query 2148 G-TCACTATATGTTGCTTGCAGATATGTATGCAG-TAACTGGTTCTTGGAGCAAGCTTG- 2204
| | ||||| | ||| ||||| ||||||||||| | |||||||||||||||||||||
Sbjct 2003 GAT-ACTATGTATTGATTGCAAATATGTATGCAACTG-CTGGTTCTTGGAGCAAGCTTGC 2060
Query 2205 T-AACGGTGAAGACTTT-ACTGAGTGACTTGGGCGTGC-AAAAGGCTCATGAGTTTGCTT 2261
| || | ||| |||| | | |||| |||||||| ||| ||||| || || || |||||
Sbjct 2061 TGAA-G-TGAGGACTATCA-TGAGGGACTTGGGTGTGAGAAAAGA-TCCTGGGTGTGCTT 2116
Query 2262 TGATGGAA-ACAGATTC 2277
||| || ||||||||
Sbjct 2117 GGATC-AATACAGATTC 2132
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91683219715
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5