BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT1G23010.1

Length=2068
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg472551 jgi|Araly1|472551|fgenesh2_kg.1__2505__AT1G23010.1        2922    0.0  
  Ahg476236 jgi|Araly1|476236|fgenesh2_kg.2__1366__AT1G71040.1        1085    0.0  


> Ahg472551 jgi|Araly1|472551|fgenesh2_kg.1__2505__AT1G23010.1
Length=2036

 Score = 2922 bits (1582),  Expect = 0.0
 Identities = 1876/2017 (93%), Gaps = 24/2017 (1%)
 Strand=Plus/Plus

Query  57    acacacacTCAAAACTGAA-TTGACTTGTCAGAAATGGAATCTCTGTTGTGTCGGAGGAG  115
             |||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| 
Sbjct  37    ACACACACTCAAAA-TTAACTTGACTTGTCAGAAATGGAATCTCTGTTGTGTCGGAGGAT  95

Query  116   GATAAAGAGAGTCATGGTGCTAATAATAGCGTTGACATGGCTCCGTAGCACGTGCGGAGA  175
             ||| |||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct  96    GATGAAGAGAGTCATGGTGCTAATAATAACGTTGACATGGCTCGGTGGCACGTGCGGAGA  155

Query  176   GCTCGAGGACCAACTATTCGAAGTAGGAAAGCTTAAGATGTTCGTCGACGACCTCCCAGA  235
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  156   GCTCGAGGACCAACTATTCGAAGTAGGAAAGCTTAAGATGTTCGTCGACGACCTCCCAGA  215

Query  236   TATGCCCAGACTCTATGGCTTTAACTCTGTTCATGGTATCATCAAACC-AGCTTCTCTTC  294
             |||||| |||||||||||||||||||||||||||| |||||||||||| | |||||||||
Sbjct  216   TATGCCTAGACTCTATGGCTTTAACTCTGTTCATGATATCATCAAACCCA-CTTCTCTTC  274

Query  295   AAATCGGCATGTTCTCCACTAAATGGAAATTCCACAGAGATTTGCCTGCGACGCCAGTGT  354
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct  275   AAATCGGCATGTTCTCCACTAAATGGAAATTCCATAGAGATTTGCCTGCGACGCCTGTGT  334

Query  355   TTGCATACGGTACATCACGGAGCAAGGCAACAGTTCCTGGTCCGACGATTGAAACCGTAT  414
             |||| || ||||||||||||||||||||||| ||||||||||||||||| ||| | || |
Sbjct  335   TTGCGTATGGTACATCACGGAGCAAGGCAACGGTTCCTGGTCCGACGATCGAAGCTGTTT  394

Query  415   ATGGAGTAGACACATACGTTACGTGGCGAAATCACCTTCCTAAATCTCACATCCTTCCTT  474
             |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||
Sbjct  395   ATGGAGTAGACACATACGTTACATGGCGAAATCACCTTCCTTCATCTCACATCCTTCCTT  454

Query  475   GGGACCCCACAATCTCCCCAGCAACTCCGAAACACGGTGGAATTCCTACGGTTGTTCACT  534
             ||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct  455   GGGACCCTACAATTTCCCCTGCAACTCCAAAACACGGTGGAATTCCTACGGTTGTTCACT  514

Query  535   TACATGGAGGAATCCACGAACCAACAAGCGACGGAAACGCCGACGCGTGGTTCACTGCCG  594
             ||||||| |||||||||||||||||||| || ||||| |||||||| |||||||||||||
Sbjct  515   TACATGGTGGAATCCACGAACCAACAAGTGATGGAAATGCCGACGCATGGTTCACTGCCG  574

Query  595   GTTTCAGAGAAACAGGACCAAAATGGACCAAAACGACGTTACATTACGAGAACAAGCAAC  654
             |||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct  575   GTTTTAGAGAGACAGGACCAAAATGGACCAAAACGACGTTGCATTACGAGAATAAGCAAC  634

Query  655   AACCTGGTAACATGTGGTACCATGACCATGCCATGGGTTTGACTCGAGTCAACCTCCTTG  714
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct  635   AACCTGGTAACATGTGGTACCATGACCATGCCATGGGTTTGACCCGAGTCAACCTCCTCG  694

Query  715   CCGGTTTGGTAGGCGCCTATATTCTTCGCCACCACGCCGTTGAATCTCCCTTTCAGCTAC  774
             |||||||||| || |||||||||||||||||||||||||| |||||||| || |||||||
Sbjct  695   CCGGTTTGGTTGGTGCCTATATTCTTCGCCACCACGCCGTAGAATCTCCGTTGCAGCTAC  754

Query  775   CTACTGGCGATGAGTTCGACCGACCGTTGATCATTTTTGATCGTAGCTTTCGTAAAGACG  834
             | ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct  755   CCACTGGCGATGAATTCGACCGACCGTTGATCATTTTTGATCGAAGCTTCCGTAAAGACG  814

Query  835   GGTCAATTTACATGAACGCCACTGGGAACAACCCATCGATTCACCCGCAGTGGCAACCGG  894
             ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct  815   GGTCAATTTACATGAACGCGACTGGGAACAACCCATCGATTCACCCGCAATGGCAACCGG  874

Query  895   AATATTTTGGCGATGTGATAATCGTTAATGGAAAAGCATGGCCAAGATTAAACGTCCGAC  954
             |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  875   AATACTTTGGCGATGTGATAATCGTTAATGGAAAAGCATGGCCACGATTAAACGTCCGAC  934

Query  955   GTAGGAAATACAGATTCCGTATCATAAACGCAAGCAACGCTAGGTTTTTCAAGTTTTTCT  1014
             ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct  935   GTAGGAAATACAGATTCCGTATCATAAACGCAAGCAACGCTAGATTTTTCAAATTTTTCT  994

Query  1015  TCTCCAACGGTCTAGATTTCATCGTTGTGGGGTCTGATTCAGCGTATTTGTCAAAGCCGG  1074
             |||||||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct  995   TCTCCAACGGTCTAAATTTCATCGTTGTGGGTTCTGATTCGGCGTATTTGTCAAAACCGG  1054

Query  1075  TGATGACCAAATCGATTCTCTTATCTCCATCAGAAATTGTAGACGTTGTTGTTGATTTCT  1134
             |||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||
Sbjct  1055  TGATGACCAAATCGATTCTCTTATCTCCGTCAGAAATTGTAGACGTCATCGTTGATTTCT  1114

Query  1135  AC-AAATCACCGTCGAGAACGGTGGTGCTTGCTAATGACGCACCATATCCTTACCCTAGT  1193
              | |||||||| |||||||| ||||| || ||||| ||||| || |||||||| ||||||
Sbjct  1115  -CGAAATCACCATCGAGAACCGTGGTACTCGCTAACGACGCGCCGTATCCTTATCCTAGT  1173

Query  1194  GGTGATCCTGTCAACGAAGAAAATGGCAAGGTAATGAAATTTATCATCAACAATGAATC-  1252
             |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | 
Sbjct  1174  GGTGATCCGGTCAACGAAGAAAATGGCAAGGTAATGAAATTTATCATCAACAACGAA-CG  1232

Query  1253  AGAGGATGACACATGTACAATTCCCAAGAAGCTCATCAATTATCCGAATGCTGACGTGTC  1312
             |||||||||| |||||||||||||||||||||||||||| || ||| |||||||| ||||
Sbjct  1233  AGAGGATGACTCATGTACAATTCCCAAGAAGCTCATCAACTACCCGCATGCTGACTTGTC  1292

Query  1313  AAACGCCGTTCTCACGCGTTACATCTCTATGTACGAGTATGTGAGTAACTCTGATGAGCC  1372
             |||||| || |||| |||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct  1293  AAACGCGGTACTCAGGCGTTACATCTCTATGTACGAGTACGTGAGCAACTCTGATGAACC  1352

Query  1373  AACTCATTTGTTAGTCAATGGTTTGCCCTATGAAGCTCCCGTTACAGAAACTCCAAAATC  1432
             |||||||||| ||||||| || || |||||||| ||||| || |||||||||||||||||
Sbjct  1353  AACTCATTTGCTAGTCAACGGCTTACCCTATGATGCTCCTGTCACAGAAACTCCAAAATC  1412

Query  1433  AGGGACTACAGAGGTATGGGAAGTGATAAATTTGACGGAAGATAACCATCCGTTACACAT  1492
             ||| || || ||||  ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  1413  AGGAACCACCGAGGCGTGGGAAGTGATAAATTTGACGGAGGATAACCATCCGTTACACAT  1472

Query  1493  TCATCTAGGATTGTTCAAAGTGGTAGAGCAAACGGCATTACTGGCGGCAGGATTGGAGGA  1552
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  1473  TCATCTAGGATTGTTCAAAGTGGTAGAGCAAACGGCATTACTGGCGGCGGGATTGGAGGA  1532

Query  1553  GTTCAAGGAGTGTATGACGAAACAAAACGACGCGGTCAAGTGTCAAATTAGCAAATACGC  1612
             ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct  1533  GTTCAAGGAATGTATGACGAAACAAAACGACGCGGTCAAGTGCCAAATCAGCAAATACGC  1592

Query  1613  TCGTGGGAAAAAGACAGCGGTGACGGCACACGAGAGGGGTTGGAAGAACGTATTCAAGAT  1672
             ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct  1593  TCGTGGGAAAAAGACGGCAGTGACGGCACACGAGAGGGGTTGGAAGAACGTATTCAAGAT  1652

Query  1673  GATGCCGGGACATGTTACGAGGATACTTGTCCGCTTTTCTTATATCCACACTAATGCATC  1732
             ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct  1653  GATGCCGGGACATGTTACGAGGATACTCGTCCGCTTTTCGTATATCCACACTAACGCATC  1712

Query  1733  TTACCCATTCGATCCGACTC-AGGAACCGGGCTATGTCTACCATTGTCACATATTGGACC  1791
              ||||||||||||||||| | || |||| |||||||||||||||||||||||||||||||
Sbjct  1713  GTACCCATTCGATCCGACCCTAG-AACCTGGCTATGTCTACCATTGTCACATATTGGACC  1771

Query  1792  ATGAGGACAATATGATGATGAGGCCGCTTAAGGTCATCATTTGATATGTCAAGGTCTAAT  1851
             ||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||| |
Sbjct  1772  ATGAGGACAATATGATGATGAGGCCGCTTAAAGTCATCAATTGATATTTCAGGGTCTATT  1831

Query  1852  GATCGATCTCTGCGAAGTTTT-GATGGTGCAAAAAGATAAAAACTAATCAGACATCATAA  1910
             ||||  || | |||||||||| ||||||||||||||||||||||||||||||||  | | 
Sbjct  1832  GATC--TC-C-GCGAAGTTTTTGATGGTGCAAAAAGATAAAAACTAATCAGACA--A-A-  1883

Query  1911  AATGAAACTC-CATATTGAGAATGTAACATAGTCTTTACTTTAATAATTCCTAGTAGGAA  1969
               |||||| | |||||||||||||||||||||||||||||||  |||||||||||| |||
Sbjct  1884  --TGAAAC-CACATATTGAGAATGTAACATAGTCTTTACTTTGTTAATTCCTAGTAAGAA  1940

Query  1970  TTCTAAAATTTAGTACTGGCTTATGTTGAAAGAACCATTCTTTCCTGATTTTATTATGAG  2029
             ||| |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| 
Sbjct  1941  TTCCAAAATTTAGTACTGGCTT-TGTTGAAAGAACCATTCTTTCCTGAATTTGTTATGAA  1999

Query  2030  TCCAAATTCAGAAATAATAAGTACTCTCTAAATTGAT  2066
             ||||||||||||||||||||||| |||||||||||||
Sbjct  2000  TCCAAATTCAGAAATAATAAGTATTCTCTAAATTGAT  2036


 Score = 76.8 bits (41),  Expect = 6e-13
 Identities = 43/44 (98%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  1   AATTTCTCTCACCCGAAGTTAATAATTCAGTCAGAAacacacac  44
           ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  1   AATCTCTCTCACCCGAAGTTAATAATTCAGTCAGAAACACACAC  44


> Ahg476236 jgi|Araly1|476236|fgenesh2_kg.2__1366__AT1G71040.1
Length=1968

 Score = 1085 bits (587),  Expect = 0.0
 Identities = 1255/1569 (80%), Gaps = 79/1569 (5%)
 Strand=Plus/Plus

Query  288   TCTCTTCAA-ATCGGCATGTTCTCCACTAAATGGAAATTCCACAGAGATTTGCCTGCGAC  346
             |||||| || || |||||||||| ||  |||||||||||||||||||| |||||||| ||
Sbjct  292   TCTCTT-AACATAGGCATGTTCTTCAAGAAATGGAAATTCCACAGAGACTTGCCTGCCAC  350

Query  347   GCCAGTGTTTGCATACGGTACATCACGGAG-CAAG--GCAACAGTTCCTGGTCCGACGAT  403
             ||||||||| || || |||||||  | ||| |  |  || ||||||||||| ||||| ||
Sbjct  351   GCCAGTGTTCGCGTATGGTACAT--C-GAGACGTGTAGCCACAGTTCCTGGACCGACAAT  407

Query  404   TGAAACCGTATATGGAGTAGACACATACGTTACGTGGCGAAATCACCTTCCTAAATC-TC  462
              ||| | || |||||||| ||||||||||| |||||||||||||||||||||  | | ||
Sbjct  408   AGAAGCTGTTTATGGAGTCGACACATACGTGACGTGGCGAAATCACCTTCCTTTA-CATC  466

Query  463   ACATCCTTCCTTGGGACCCCACAATCTCCCCAGCAACT-CCGAAACACGGTGGAATTCCT  521
             | ||||| ||||||||||| ||||||||||| |||| | || |||||||| || ||||| 
Sbjct  467   ATATCCTCCCTTGGGACCCAACAATCTCCCCTGCAA-TCCCTAAACACGGCGGCATTCCC  525

Query  522   ACGGTTGTTCACTTACATGGAGGAATCCACGAACCAACAAGCGACGGAAACGCCGACGCG  581
             || || |||||||| || || || |||||||||||||| ||||| ||||| || ||  | 
Sbjct  526   ACCGTGGTTCACTTGCACGGCGGCATCCACGAACCAACTAGCGATGGAAATGCAGATTCA  585

Query  582   TGGTTCACTGCCGGTTTCAGAGAAACAGG-ACCAAAATGGACCAAAACGACGTTA--CAT  638
             |||||||| || ||||||| ||| |||||  || ||||||||||||| |||  ||  |||
Sbjct  586   TGGTTCACCGCTGGTTTCAAAGAGACAGGTTCC-AAATGGACCAAAAAGAC--TACGCAT  642

Query  639   TACGAGAACAAGCAACAACCTGGTAACATGTGGTACCATGACCATGCCATGGGTTTGACT  698
             ||||  ||||||||||||||||| |||||||||||||||||||| ||  |||||||||| 
Sbjct  643   TACGTTAACAAGCAACAACCTGGAAACATGTGGTACCATGACCACGCGTTGGGTTTGAC-  701

Query  699   C-GAGTCAACCTCCTTGCCGGTTTGGTAGGCGCCTATATTCTTCGCCACCA-CGCCGTTG  756
             | |||||||||| || ||||||||| |||| || || ||||| ||||| || | |||| |
Sbjct  702   CAGAGTCAACCTTCTCGCCGGTTTGTTAGGTGCTTACATTCTCCGCCA-CAGCTCCGTCG  760

Query  757   AATCTCCCTTTCAG-CTACCTACTGG-CGATGAGTTCGACCGACCGTTGATCATTTTTGA  814
             ||||  ||| || | |||||||| || || ||| || || || || ||| |||| |||||
Sbjct  761   AATC-GCCTCTCCGACTACCTACCGGCCG-TGAATTTGATCGTCCTTTGGTCATCTTTGA  818

Query  815   TCGTAGCTTTCGTAAAGACGGGTCAATTTACATGAACGCCACTGGGAACAACCCATCGAT  874
              || || ||||||||||| || || ||||||||||||||||| ||||||||||| |||||
Sbjct  819   CCGAAGTTTTCGTAAAGATGGTTCCATTTACATGAACGCCACAGGGAACAACCCGTCGAT  878

Query  875   TCACCCGCAGTGGCAACCGGAATATTTTGGCGATGTGATAATCGTTAATGGAAAAGCATG  934
             ||||||||| ||||| || || ||||| ||||| |  || || || || || ||||| ||
Sbjct  879   TCACCCGCAATGGCAGCCAGAGTATTTCGGCGACGCCATCATTGTGAACGGTAAAGCTTG  938

Query  935   GCCAAGATTAAACGTCCGACGTAGGAAATACAGATTCCGTATCATAAACGCAAGCAACGC  994
             |||  || ||| |||||| ||  ||||||| ||||| || |||| |||||| || |||||
Sbjct  939   GCCGCGACTAACCGTCCGTCGCCGGAAATATAGATTTCGGATCACAAACGCTAGTAACGC  998

Query  995   TAGGTTTTTCAAGTTTTTCTTCTCCAACGGTCTAGATTTCATCGTTGTGGGGTCTGATTC  1054
              |||||||||  |||||| |||||||||||||| || ||||| || ||||| ||||||||
Sbjct  999   AAGGTTTTTCCGGTTTTTTTTCTCCAACGGTCTCGAATTCATTGTCGTGGGTTCTGATTC  1058

Query  1055  AGCGTA-TTTGTC-AAAGCCGGTGAT-GACCAAATCGA-TTCT-CTTATCTCCATCAGAA  1109
             ||| ||  | | | ||| || || || ||||||||| | |||| |||  |||| || || 
Sbjct  1059  AGCTTACCTAG-CGAAA-CCAGT-ATCGACCAAATC-AGTTCTACTT-GCTCCGTCGGAG  1113

Query  1110  ATTGTAGACGTTGTTGTTGA-TTTCTACAAA-TCACCGTCGAGAACGGTGGTGCTTGCTA  1167
             ||| | ||||| || ||||| ||| | |||| ||| | |||| |||||   | ||||| |
Sbjct  1114  ATTATCGACGTCGTCGTTGACTTT-T-CAAAGTCAACATCGAAAACGGCAATTCTTGCCA  1171

Query  1168  ATGACGCACCATATCCTTACCC-TAGTGGTGATCCTGTCAAC-GAAGAAAATGGCAAGGT  1225
             |  | ||||| ||||||||||| | | || ||||| ||| || ||||| ||  |||| ||
Sbjct  1172  ACAATGCACCTTATCCTTACCCGTCG-GGAGATCCCGTC-ACGGAAGAGAACAGCAAAGT  1229

Query  1226  AATGAAATTTATCATCAACAATGAATCAGAGGATGACACAT-GTACAATTCCCAAGAAGC  1284
              ||||| ||||  ||||| ||  ||||||| | |||||| | | || ||||| |||||||
Sbjct  1230  CATGAAGTTTAAAATCAAGAACAAATCAGAAGTTGACACGTCG-ACTATTCCGAAGAAGC  1288

Query  1285  TCA-TCAATTATCCGAATGCTGACGTGTCAAACGCCGTTCTC--ACGCGTTACATCT-CT  1340
             | | | || || |||  |||| | || |||| | ||  || |  || |||||||| | ||
Sbjct  1289  TAATTGAA-TACCCGCCTGCTAATGTATCAACCTCC--TCACGTACACGTTACAT-TGCT  1344

Query  1341  ATGTACGAGTATGTGAGTAACTCTGATGAGCCAACTCATTTGTTA-GTCAATGGTTTGCC  1399
             |||| ||||||||||  || | |||| |||||||| ||| |  ||  |||| || |||||
Sbjct  1345  ATGTTCGAGTATGTGTCTAGCACTGACGAGCCAACACATCT-ATACATCAACGGCTTGCC  1403

Query  1400  CTATGAA-GCTCCCGTTACAGAAACTCC-AAAATCAGGGACTA-CAGAGGTATGGGAAGT  1456
              ||  || |||||||| ||||||||||| |||||| || || | | ||||| ||||||||
Sbjct  1404  GTA-CAACGCTCCCGTGACAGAAACTCCAAAAATC-GGCACAAGC-GAGGTGTGGGAAGT  1460

Query  1457  GATAAATTTGACGGAAGATAACCATCCGTTACACATTCATC-TAGGATTGTTCAAAGTGG  1515
             ||| ||||||||||| ||||||||||| || |||||||| | | ||||||||||||||  
Sbjct  1461  GATTAATTTGACGGAGGATAACCATCCATTGCACATTCA-CTTGGGATTGTTCAAAGTAT  1519

Query  1516  TAGAGCAAACGGCATTACTGGCGGCAGGATTG-GAGGAGTTCA-AGGAGTGTATGACGAA  1573
             | |||||||||||| |  |||  | |  || | |||||||||| | || |||||||| ||
Sbjct  1520  TGGAGCAAACGGCA-T--TGG-TG-A--ATAGTGAGGAGTTCATA-GACTGTATGACTAA  1571

Query  1574  ACAAAACGACGCGGTCAAGTGTCAAATTAGCAAATACGCTCGT-GGGAAAAAGACAGCGG  1632
             | ||||||| || ||||||||||| |||||||||||||| | | ||||| ||||| ||||
Sbjct  1572  AGAAAACGATGCCGTCAAGTGTCAGATTAGCAAATACGCAC-TAGGGAACAAGACCGCGG  1630

Query  1633  TGACGGCACACGAGAGGGGTTGGAAGAACGTATTCAAGATGATGCCGGGACATGTTACGA  1692
             |||||| ||||||| |||| ||||| ||||||||||||||||||||||| ||||| ||||
Sbjct  1631  TGACGGTACACGAGCGGGGATGGAAAAACGTATTCAAGATGATGCCGGGGCATGTCACGA  1690

Query  1693  GGATACTTGTCCGCTTTTCTTATATCCACACTAATGCATCTTAC-CCATTCGATCCGACT  1751
              ||| || ||| | |||||||| || ||| | || | ||||||| || || ||| | |||
Sbjct  1691  AGATCCTCGTCAGATTTTCTTACATTCACTCGAACGAATCTTACTCC-TTTGATGCAACT  1749

Query  1752  CAGGAACCGGGCTATGTCTACCATTGTCACATATTGGACCATGAGGACAATATGATGATG  1811
             || || || ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  1750  CAAGAGCCAGGCTATGTCTACCATTGTCACATATTGGACCATGAAGACAATATGATGATG  1809

Query  1812  AGGCCGCTT  1820
             ||||| |||
Sbjct  1810  AGGCC-CTT  1817



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 77780280290


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5