BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G24170.1
Length=1617
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472678 jgi|Araly1|472678|fgenesh2_kg.1__2632__AT1G24170.1 2375 0.0
Ahg476133 jgi|Araly1|476133|fgenesh2_kg.2__1263__AT1G70090.1 1009 0.0
Ahg937924 jgi|Araly1|937924|scaffold_502115.1 141 2e-32
Ahg470231 jgi|Araly1|470231|fgenesh2_kg.1__185__AT1G02720.1 134 3e-30
> Ahg472678 jgi|Araly1|472678|fgenesh2_kg.1__2632__AT1G24170.1
Length=1588
Score = 2375 bits (1286), Expect = 0.0
Identities = 1500/1597 (94%), Gaps = 40/1597 (3%)
Strand=Plus/Plus
Query 33 ttcttcttcttcttcctctttccttatctctccatctctGTGGAGAGACACAAAACTTCC 92
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19 TTCTTCTTCTTCTTCCTCTTTCCTTATCTCTCCATCTCTGTGGAGAGACACAAAACTTCA 78
Query 93 AAAAAGGAACATTCTTTCAGTTCTTTACTTAATCTTTCACAATGCTAAATCATTAGCCGT 152
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| | |
Sbjct 79 AAAAAGGAACATTCTTTCAATTCTTTACTTAATCTTTCACAATGCTATATCATTAG-C-T 136
Query 153 TGATAAAGTCTTAATCTTTGATTCATTCAAACGCGTTTTTGTTTAGTAATGTCGTCGCGT 212
| | || |||| ||||| | ||||||||||| |||| |||||||||||||||||||
Sbjct 137 T--T-AA-TCTT-TTCTTT-A---ATTCAAACGCG-TTTT-TTTAGTAATGTCGTCGCGT 185
Query 213 TTTTCTTTGACGGTGGTGTGTTTGATTGCTCTGTTACCGTTTGTTGTTGGTATACGGTTG 272
|||||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct 186 TTTTCTTTAACGGTGGTGTGTTTGATTGTTCTGTTACCGTTTGCCGTTGGAATACGGTTG 245
Query 273 ATTCCGGCGAGGATCACGAGTGTCGGTGATGGCGGCGGCGGAGGAGGTAATAATGGGTTT 332
|||||||||||||||| ||||||| | | |||||| || |||||||| ||||||||||
Sbjct 246 ATTCCGGCGAGGATCATGAGTGTC-G-G-TGGCGGAGGAGGAGGAGG---TAATGGGTTT 299
Query 333 AGTAAACTTGGTCCGTTTATGGAAGCTCCGGAGTATAGAAACGGCAAGGAGTGTGTATCT 392
|||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct 300 AGTAAACTTGGTCCGTTTATGGAAGCTCCGGATTACAGAAACGGCAAGGAGTGTGTGTCG 359
Query 393 TCATCAGTGAACAGAGAGAACTTCGTGTCGTCTTCTTCTAGTTCTAATGATCCTTCGCTT 452
||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||
Sbjct 360 TCATCAGTGAACAGAGACAACTTCGTGTCG---TCTTC---TTCTAATGATCCTTCGCTT 413
Query 453 GTTCACATCGCTATGACTTTGGACTCAGAGTATCTCCGTGGATCAATCGCAGCCGTTCAT 512
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 414 GTTCACATAGCTATGACTTTGGATTCAGAGTATCTCCGTGGATCAATCGCAGCCGTTCAT 473
Query 513 TCTGTTCTTCGCCACGCGTCTTGTCCAGAGAACGTCTTCTTCCATTTCATCGCTGCTGAG 572
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 TCTGTTCTCCGCCACGCGTCTTGTCCAGAGAACGTCTTCTTCCATTTCATCGCTGCTGAG 533
Query 573 TTTGACTCTGCGAGTCCTCGTGTTCTGAGTCAACTCGTGAGGTCGACTTTTCCTTCGTTG 632
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 534 TTTGACTCGGCGAGTCCTCGTGTGCTGAGTCAACTCGTGAGGTCGACTTTTCCTTCGCTG 593
Query 633 AACTTTAAAGTCTACATTTTTAGGGAAGATACGGTGATCAATCTCATATCTTCTTCGATT 692
||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct 594 AACTTTAAAGTCTACATTTATAGGGAAGATACGGTGATCAATCTCATATCGTCGTCGATT 653
Query 693 AGACTAGCTTTGGAGAATCCGTTGAACTATGCTCGGAACTATCTCGGAGATATTCTTGAT 752
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 654 AGACAAGCTTTGGAGAATCCGTTGAACTATGCTCGGAACTATCTCGGAGATATTCTTGAT 713
Query 753 CGAAGTGTTGAACGAGTCATTTATCTTGACTCGGATGTTATAACTGTGGATGATATCACA 812
||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 714 CGAAGCGTGGAACGAGTCATTTATCTTGACTCAGATGTTATAACTGTTGATGATATCACA 773
Query 813 AAGCTTTGGAACACGGTTTTGACCGGGTCACGAGTCATCGGAGCTCCGGAGTATTGTCAC 872
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 774 AAGCTTTGGAACACGGTTTTGACCGGGTCACGGGTTATCGGAGCTCCGGAGTATTGTCAC 833
Query 873 GCGAACTTCACTCAGTATTTCACTTCCGGGTTCTGGTCAGACCCGGCTTTACCGGGTCTA 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 834 GCGAACTTCACTCAGTATTTCACTTCCGGGTTCTGGTCAGACCCGGCTTTACCGGGTCTA 893
Query 933 ATCTCGGGTCAAAAGCCTTGCTATTTCAACACAGGAGTGATGGTGATGGATCTTGTTAGA 992
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 894 ATCTCGGGTCAAAAACCTTGCTATTTCAACACAGGAGTGATGGTGATGGATCTTGTAAGA 953
Query 993 TGGAGAGAAGGGAATTACAGAGAGAAGTTAGAGCAATGGATGCAATTGCAGAAGAAGATG 1052
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 954 TGGAGAGAAGGGAATTACAGAGAGAAGCTAGAGCAATGGATGCAATTGCAGAAGAAGAAG 1013
Query 1053 AGAATCTACGATCTTGGATCATTACCACCGTTTCTTTTGGTGTTTGCGGGTAATGTTGAA 1112
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1014 AGAATCTACGATCTTGGATCATTACCACCGTTTCTTTTGGTGTTTGCTGGTAATGTTGAA 1073
Query 1113 GCTATTGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATATACGAGGAAGTTGT 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 GCTATTGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATATACGAGGAAGTTGT 1133
Query 1173 CGGTCATTGCATCCTGGTCCTGTGAGCTTGTTGCATTGGAGTGGTAAAGGTAAGCCATGG 1232
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1134 CGGTCATTGCATCCTGGTCCTGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAAGCCATGG 1193
Query 1233 GTTAGACTTGATGAGAAGAGGCCTTGTCCGTTGGATCATCTTTGGGAGCCATATGATTTG 1292
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1194 GTTAGACTTGATGAGAAGAGACCTTGTCCGTTGGATCATCTTTGGGAGCCATATGATTTG 1253
Query 1293 TATAAGCATAAGATTGAGAGAGCTAAAGATCAGTCTCTGCTTGGGTTTGCTTCTCTGTCG 1352
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 TATAAACATAAGATTGAGAGAGCTAAAGATCAGTCTCTGCTTGGGTTTGCTTCTCTGTCG 1313
Query 1353 GAGTTGACTGATGATTCAAGCTTCTTGTGAGAGTTTTAAA---GTTACATTCTTTTT-CA 1408
||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||| ||
Sbjct 1314 GAGTTGACTGATGATTCAAGCTTTTTGTGAGAGTTTAAAAAAAGTTTCATTCTTTTTTCA 1373
Query 1409 -ATATCTTCTGTTGTATTACAGA-TG-A-AA-TATCATTGTTCAGGTGAGTGATTCTTTG 1463
| |||||||||||||||||||| | | || ||||||||||||||||||||||||||||
Sbjct 1374 TAAATCTTCTGTTGTATTACAGAGTTTACAAATATCATTGTTCAGGTGAGTGATTCTTTG 1433
Query 1464 ATTTTCTGTTGTACAAA-TCTATTTTAGAGAGGGAAGATATATATTAGGCTGTGGAAAAG 1522
||| |||| |||||||| || ||||||||||||||||| ||||| ||||||||||||||
Sbjct 1434 ATTGTCTGGTGTACAAAATCGATTTTAGAGAGGGAAGAGATATAG-AGGCTGTGGAAAAG 1492
Query 1523 CCATTGATGATCCTT-TTT--GTTGAGAATTCTTTTGTCATTCTGGCGCTCTTGTGTTTC 1579
|||||||||| |||| ||| ||||||||||||||||||||| ||| |||||||| || |
Sbjct 1493 CCATTGATGACCCTTATTTTTGTTGAGAATTCTTTTGTCATTTTGGTGCTCTTGT-TTCC 1551
Query 1580 AATCTTTTCTTCTTAATAAAACTCATCTTGAAGTGCC 1616
|||||||| |||| |||||||||||||||||||||||
Sbjct 1552 AATCTTTTGTTCTGAATAAAACTCATCTTGAAGTGCC 1588
> Ahg476133 jgi|Araly1|476133|fgenesh2_kg.2__1263__AT1G70090.1
Length=1576
Score = 1009 bits (546), Expect = 0.0
Identities = 898/1062 (85%), Gaps = 48/1062 (5%)
Strand=Plus/Plus
Query 342 GGTCCGTTTATGGAAGCTCCGGAGTATAGAAACGGCAAGGAGTGTGTATCTTC-ATCAG- 399
||| |||| |||||||||||||||| ||||||||||||||||| || || || ||| |
Sbjct 255 GGT-CGTTCGTGGAAGCTCCGGAGTACAGAAACGGCAAGGAGTGCGTGTC-TCAATC-GT 311
Query 400 TGAACAGAGAGAACTTCGTGTCGTCTTCTTCTAGTTCTAATGATC-CTTCGCTT-GTTCA 457
| ||||||||||||||||||||| || | | | | || | ||||| || |||||
Sbjct 312 TAAACAGAGAGAACTTCGTGTCG---TC-T-T-G--C----GA-CGCTTCG-TTAGTTCA 357
Query 458 CATCGCTATGAC-TTTGGACTCAGAGTATC-TCCGTGGATCAATCGCAGCCGTTCATTCT 515
| |||||||| || ||||||||||| | | ||||| |||||||||||||||||||||
Sbjct 358 TGTAGCTATGACGCTT-GACTCAGAGTA-CTTACGTGGCTCAATCGCAGCCGTTCATTCT 415
Query 516 GTTCTTCGCCACGCGTCTTGTCCAGAGAACGTCTTCTTCCATTTCATCGCTGCTGAGTTT 575
| || ||||||||||| |||||||||||||||||||||||| |||||||||| ||||||
Sbjct 416 ATGCTCCGCCACGCGTCGTGTCCAGAGAACGTCTTCTTCCATCTCATCGCTGCAGAGTTT 475
Query 576 GACTCTGCGAGTCCTCGTGTTCTGAGTCAACTCGTGAGGTCGACTTTTCCTTCGTTGAAC 635
||| | |||||||| || ||||||||||||||||| | || ||||| || ||||| |||
Sbjct 476 GACCCAGCGAGTCCACGCGTTCTGAGTCAACTCGTCCGATCTACTTTCCCGTCGTTAAAC 535
Query 636 TTTAAAGTCTACATTTTTAGGGAAGATACGGTGATCAATCTCATATCTTCTTCGATTAGA 695
|| |||||||||||||| | ||||||||||||||||| || || |||||||| || |||
Sbjct 536 TTCAAAGTCTACATTTTCCGAGAAGATACGGTGATCAACCTTATCTCTTCTTCAATCAGA 595
Query 696 CTAGCTTTGGAGAATCCGTTGAACTATGCTCGGAACTATCTCGGAGATATTCTTGATCGA 755
| ||| || |||||||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct 596 CAAGCCTTAGAGAATCCATTGAACTACGCTCGGAACTATCTCGGAGATATTCTTGATCCA 655
Query 756 AGTGTTGAAC-GAGTCATTTATCTTGACTCGGATGTTATAAC-T-GTGGATGATATCACA 812
| || | || |||||||||| |||||||| || | || | | || ||||| || |||
Sbjct 656 TGCGTAG-ACAGAGTCATTTACCTTGACTCAGACATCAT--CGTCGTCGATGACATAACA 712
Query 813 AAGCTTTGGAACACG-GTTTTGACCGGGTCACGAGTCATCGGAGCTCCGGAGTATTGTCA 871
||||||||||||||| | ||| || | ||||||| |||||||||||||||||||||||||
Sbjct 713 AAGCTTTGGAACACGAG-TTTAACAGAGTCACGAATCATCGGAGCTCCGGAGTATTGTCA 771
Query 872 CGCGAACTTCACTCAGTATTTCACTTCCGGGTTCTGGTCAGACCCGGCTTTA-CCGG-GT 929
||| |||||||| |||| |||||||| || |||||||| |||||||||||| |||| |
Sbjct 772 CGCTAACTTCACAAAGTACTTCACTTCAGGTTTCTGGTCCGACCCGGCTTTACCCGGATT 831
Query 930 CTAATCTCGGGTCAAAAGCCTTGCTATTTCAACACAGGAGTGATGGTGATGGATCTTGTT 989
|| ||||||||| ||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 832 CT--TCTCGGGTCGAAAGCCTTGTTATTTCAACACGGGTGTGATGGTGATGGATCTTGTT 889
Query 990 AGATGGAGAGAAGGGAATTACAGAGAGAAG-TTAG-AGCAATGGATGCAATTGCAGAAGA 1047
|||||||||||||| ||||||||||| ||| || | | | ||||||||| | |||||||
Sbjct 890 AGATGGAGAGAAGGTAATTACAGAGAAAAGCTT-GAAAC-TTGGATGCAAATACAGAAGA 947
Query 1048 AGATGAGAATCTACGATCTT-GGATCATTACCACCGTTTCTT-TTGGTGTTTGCGGGTAA 1105
||| ||||||||||||| || || || || || ||||||||| || || || ||||||||
Sbjct 948 AGAAGAGAATCTACGAT-TTGGGTTCTTTGCCTCCGTTTCTTCTT-GTCTTCGCGGGTAA 1005
Query 1106 TGTTGAAGCTATTGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATATACGAGG 1165
|||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1006 CGTTGAAGCAATAGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATGTACGAGG 1065
Query 1166 AAGTTGTCGGTCATTGCATCCTGGTCCTGTGAGCTTGTTGCATTGGAGTGGTAAAGGTAA 1225
||||||| |||| |||||| || || ||||| ||||||||||||||||||||||||||
Sbjct 1066 AAGTTGTAGGTCTTTGCATAAAGGACCAGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAA 1125
Query 1226 GCCATGGGTTAGACTTGATGAGAAGAGGCCTTGTCCGTTGGATCATCTT-TGGGAGCCAT 1284
|||||||||||| |||||||||||||| || ||||||||||||||| || ||||| || |
Sbjct 1126 GCCATGGGTTAGGCTTGATGAGAAGAGACCGTGTCCGTTGGATCAT-TTGTGGGAACCGT 1184
Query 1285 ATGATTTGTATAAGCATAAGATTGAGAGAGCTAAAGATCAGTCTCTGCTTGGGTTTGCTT 1344
||||||| ||| ||||||||||||| ||||||||||| | |||| || |||||||| |||
Sbjct 1185 ATGATTTATATGAGCATAAGATTGAAAGAGCTAAAGACCTGTCTTTGTTTGGGTTTTCTT 1244
Query 1345 CTCTGTCGGAGTTGACTGATGATTCAAGCTTCTTGTGA-GAG 1385
|| |||| ||||| || || || |||||||| |||||| |||
Sbjct 1245 CTTTGTCTGAGTTAACAGAAGAATCAAGCTTTTTGTGAAGAG 1286
> Ahg937924 jgi|Araly1|937924|scaffold_502115.1
Length=1066
Score = 141 bits (76), Expect = 2e-32
Identities = 266/353 (75%), Gaps = 32/353 (9%)
Strand=Plus/Plus
Query 957 TTCAACACAGGAGTGATGGTGATGGATCTTGTTAGATGGAGAGAAGGGA-ATTACA-GAG 1014
|||||||| ||||||||||| || || || | |||| | ||| ||| |||| | |||
Sbjct 678 TTCAACACCGGAGTGATGGTTATCGAGCTAAAGAAATGGCGCGAA-GGAGATTATACGAG 736
Query 1015 AGAAG-TTAGAGCAATGGATGCAATTGCAGAAGAA--GATGAGAATCTACGATCTT-GGA 1070
|||| | | || | |||||| | || || || || ||| ||||||||||| || ||
Sbjct 737 -GAAGATCATAG-AGTGGATGGAGTTACA-AA-AACGGATAAGAATCTACGA-GTTAGGC 791
Query 1071 TCATTACCACCGTTTCTT--TTGGTGTTTGCGGGTAATGTTGAAGCTATTGATCATAGAT 1128
|| |||||||||||| || || || || || || || | | | | ||||| | |
Sbjct 792 TCTTTACCACCGTTT-TTACTT-GTCTTCGCCGGAAACATAGCTCCGGTAGATCACCGGT 849
Query 1129 GGAACCAACATGGTTTAGGAGGAGACAATAT-ACGAGGAA-GTTGTCG-GTCATT-GCAT 1184
||||||||||||||||||||||||||||| | | ||||| || |||| | ||| ||||
Sbjct 850 GGAACCAACATGGTTTAGGAGGAGACAATTTCA-GAGGACTGT-GTCGAG--ATTTGCAT 905
Query 1185 CCTGGTCCTGTGAGCTTGTTGCATTGGAGTGGTAAAGGTAAGCCATGGGTTAGACTT-GA 1243
|| ||||| ||||| ||||||||||||||||| ||||| ||||||||||| || || ||
Sbjct 906 CCAGGTCCAGTGAGTTTGTTGCATTGGAGTGGGAAAGGGAAGCCATGGGTAAGG-TTAGA 964
Query 1244 TGA-GAA-GAGGCCTTGTCCGTTGGAT-CATCTTTGGGAGCCATATGATTTGT 1293
|| | || ||||| ||| | ||| || ||||||| |||||||||||||
Sbjct 965 CGATGGTCGA--CCTTGCCCGCTCGATGCA-CTTTGGGTTCCATATGATTTGT 1014
> Ahg470231 jgi|Araly1|470231|fgenesh2_kg.1__185__AT1G02720.1
Length=1383
Score = 134 bits (72), Expect = 3e-30
Identities = 380/521 (73%), Gaps = 51/521 (10%)
Strand=Plus/Plus
Query 801 GATGATATC-ACAAAGCTTTGGAACACGGTTTTGACCGGGTCACGAG-TC-ATCGGAGCT 857
||||||||| | ||||||||||| |||| ||| | || || ||| | |||||||||
Sbjct 751 GATGATATCGTC-AAGCTTTGGAAAACGGGTTT-A---GGCCA-GAGAACAATCGGAGCT 804
Query 858 CCGGAGTATTGTCACGCGAACTTCACTCAGTATTTCACTTCCG-GGTTCT-GGTCAGACC 915
|||||||||||||||||||| ||||| | || ||||| | | |||| | |||||||
Sbjct 805 CCGGAGTATTGTCACGCGAATTTCACGAAATACTTCAC--CGGAGGTTTTTGGTCAGATA 862
Query 916 CG-GCTTTACCGGGTC-TAATCTC-GGGTCAAAAGCCTTGCTATTTCAACACAGGAGTGA 972
| | |||| |||| | | || ||| ||| ||||| || ||||| || || || |
Sbjct 863 AGAGGTTTAACGGGACGT--TCAAAGGGAGAAAC-CCTTGTTACTTCAATACTGGTGTAA 919
Query 973 TGGTGATGGATCTTGTTAGA--TGGAGA-GAAGGGAATTACA-GAGA-GAAGTTAGAGCA 1027
||||||| ||| ||| ||| |||||| || | |||| || | | | || ||| |
Sbjct 920 TGGTGATTGAT-TTGA-AGAAGTGGAGACGATTT-AGGTACACGAAACGCA-TT-GAGAA 974
Query 1028 ATGGATGCA-ATTGCAGAAGAAG-ATGAGAATCTACGATCTTGGATCA-TTACCACCGTT 1084
||||||| | ||| ||||||| | | ||| || || || || || || || || |||||
Sbjct 975 ATGGATGGAGATT-CAGAAGATGGA-GAGGATTTATGAGCTGGGTTCTCTT-CCTCCGTT 1031
Query 1085 TCTTTTGGTGTTTGCGGGTAATGTTGAAGCTATTGATCATAGATGGAACCAACATGGT-T 1143
|||| |||| ||||| ||| |||| | | ||| ||| | ||||| |||||||| |
Sbjct 1032 TCTTCTGGTATTTGCTGGTCATGTAGCTCCGATTTCGCATCGGTGGAATCAACATGGACT 1091
Query 1144 TAGGAGGAGACAATAT-ACGAGGAAGTTGTCGGTCATT-GCATCCTGGTCCTGTGAGCTT 1201
| || || || ||| | | |||| || || || | ||| |||| ||||||||||||| ||
Sbjct 1092 T-GGTGGTGATAATGTTA-GAGGTAGCTGCCG-TGATTTGCATTCTGGTCCTGTGAGTTT 1148
Query 1202 G-TTGCATTGGAGTGGTAAAGGTAAGCCATGGGTTA-GACTTGATGAGAAGAGGCCTTGT 1259
| || |||||| |||| |||||||||||| ||| |||||||| ||| || |||
Sbjct 1149 GCTT-CATTGGTCAGGTAGTGGTAAGCCATGG-TTAAGACTTGATTCCAAGCTTCCATGT 1206
Query 1260 CCGTTGGATCATC-TT-TGGG-AGCCATATGATTTGTATAA 1297
|| || || || | || |||| | || ||||||||||||||
Sbjct 1207 CCTTTAGA-CA-CATTGTGGGCA-CCTTATGATTTGTATAA 1244
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60601579795
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5