BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G24400.1 Length=1749 Score E Sequences producing significant alignments: (Bits) Value Ahg921747 jgi|Araly1|921747|scaffold_103028.1 2170 0.0 Ahg908321 jgi|Araly1|908321|Al_scaffold_0002_1402 1000 0.0 Ahg947663 jgi|Araly1|947663|scaffold_703892.1 475 4e-133 > Ahg921747 jgi|Araly1|921747|scaffold_103028.1 Length=1369 Score = 2170 bits (1175), Expect = 0.0 Identities = 1303/1366 (95%), Gaps = 4/1366 (0%) Strand=Plus/Plus Query 243 TCTCTCGATTATATCACAAGGAGATATGGGGAACAGTGAAATGTCAGCGAGTGAGGTTGC 302 |||||||| |||||||||||||||||||||| | |||||||||||| || |||||||| Sbjct 1 TCTCTCGA--GTATCACAAGGAGATATGGGGAATAATGAAATGTCAGCCAGCGAGGTTGC 58 Query 303 GGCGGCCAAGCAGAAGAACGTCGACGATTGGTTACCGATCACATCTTCCAGAAACGCTAA 362 |||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 59 GGCGGCTAGGCAGAAGAACGTCGACGATTGGTTACCGATCACATCCTCCAGAAACGCTAA 118 Query 363 GTGGTGGTACTCTGCTTTTCACAATGTCACCGCCATGGTTGGTGCTGGTGTTCTTAGCTT 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 119 GTGGTGGTACTCTGCTTTTCACAATGTCACCGCCATGGTTGGTGCTGGTGTTCTCAGCTT 178 Query 423 GCCCTACGCTATGTCCAATCTCGGATGGGGACCTGGAGTGACGATTATGGTGATGTCATG 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 179 GCCCTACGCTATGTCCAATCTCGGATGGGGACCTGGTGTGACGATTATGGTGATGTCATG 238 Query 483 GATCATAACGT-TGTACACACTGTGGCAAATGGTGGAGATGCATGAGATTGTTCCAGGGA 541 | | ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 239 GTTAATAAC-TATGTACACACTGTGGCAAATGGTGGAGATGCATGAGATTGTTCCAGGGA 297 Query 542 AGAGGCTTGATAGGTATCACGAGCTAGGTCAACACGCTTTTGGTGAAAAGCTTGGCCTAT 601 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 298 AGAGGCTTGATAGGTATCACGAGCTAGGTCAACACGCTTTTGGCGAAAAGCTTGGCCTAT 357 Query 602 GGATCGTCGTGCCGCAGCAGCTTATCGTGGAGGTCGGTGTTGACATCGTTTATATGGTCA 661 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 358 GGATCGTCGTGCCGCAGCAGCTTATCGTGGAGGTCGGTGTAGACATCGTTTATATGGTCA 417 Query 662 CAGGAGGAGCATCCCTCAAGAAAGTCCATCAACTAGTCTGTCCCGATTGCAAAGAGATCA 721 |||||||||||||||| |||||||||||||||||| ||||| | ||||||||||| |||| Sbjct 418 CAGGAGGAGCATCCCTTAAGAAAGTCCATCAACTACTCTGTTCTGATTGCAAAGAAATCA 477 Query 722 GAACTACGTTTTGGATCATGATCTTTGCTTCCGTCCACTTTGTTATCTCTCACCTTCCCA 781 ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 478 GAACTACATTTTGGATCATGATCTTTGCTTCCATCCATTTTGTTATCTCTCACCTTCCCA 537 Query 782 ATTTCAACTCTATCTCCATCATCTCACTTGCCGCGGCTGTTATGTCCTTAACTTACTCAA 841 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 538 ATTTCAACTCTATCTCCATCATCTCACTCGCCGCGGCTGTTATGTCCTTAACTTACTCAA 597 Query 842 CTATTGCTTGGGCTGCATCCGTGCACAAAGGGGTACATCCAGATGTGGACTACTCTCCTA 901 |||| |||||| |||| || ||||||||||||||||||||||||||||||||| |||||| Sbjct 598 CTATCGCTTGGACTGCTTCGGTGCACAAAGGGGTACATCCAGATGTGGACTACACTCCTA 657 Query 902 GAGCATCAACCGATGTTGGAAAAGTATTCAACTTCTTGAATGCGTTGGGAGATGTGGCTT 961 |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 658 GAGCCTCTACCGATGCTGGAAAAGTATTCAACTTCTTGAATGCGTTGGGAGATGTGGCTT 717 Query 962 TTGCTTATGCAGGTCACAACGTTGTGTTGGAGATTCAGGCCACAATCCCTTCGACTCCGG 1021 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 TTGCCTATGCAGGTCACAACGTTGTGTTGGAGATTCAGGCCACAATCCCTTCGACTCCGG 777 Query 1022 AGATGCCATCCAAGGTCCCAATGTGGAGAGGAGTTATTGTAGCCTACATTGTAGTCGCCA 1081 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 778 AGATGCCATCCAAGATCCCAATGTGGAGAGGAGTTGTTGTAGCCTACATTGTAGTCGCCA 837 Query 1082 TCTGTTACTTCCCTGTAGCATTCCTCGGCTATTATATCTTTGGAAACAGCGTTGATGACA 1141 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 TCTGCTACTTCCCTGTAGCATTCCTCGGCTATTATATCTTTGGAAACAGCGTTGATGACA 897 Query 1142 ACATCCTCATCACTTTGGAGAAGCCTATCTGGCTTATTGCTATGGCTAACATGTTCGTGG 1201 |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 898 ACATTCTCATCACTTTGGAGAAGCCTGTCTGGCTTATTGCCATGGCTAACATGTTCGTGG 957 Query 1202 TTATCCATGTCATTGGAAGCTATCAGATATTTGCAATGCCAGTTTTTGACATGCTCGAAA 1261 || |||| |||||||||||||||||||||||||||||||| || ||||||||| | |||| Sbjct 958 TTGTCCACGTCATTGGAAGCTATCAGATATTTGCAATGCCGGTATTTGACATGATGGAAA 1017 Query 1262 CCGTTTTGGTCAAAAAGATGAATTTCAATCCTTCTTTCAAGCTCCGCTTCATTACTCGTA 1321 |||||||||||||||||||||||||| ||||||| |||||||||||||| || ||||||| Sbjct 1018 CCGTTTTGGTCAAAAAGATGAATTTCGATCCTTCCTTCAAGCTCCGCTTTATCACTCGTA 1077 Query 1322 GTCTTTACGTCGCTTTCACGATGATTGTTGCGATATGCGTCCCGTTTTTCGGTGGACTAC 1381 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1078 GCCTTTACGTCGCTTTCACGATGATCGTTGCGATATGCGTCCCGTTTTTCGGTGGACTAC 1137 Query 1382 TCGGCTTCTTTGGAGGATTCGCCTTTGCCCCAACAACTTACTACCTTCCATGCATTATGT 1441 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1138 TTGGCTTCTTTGGAGGATTCGCCTTCGCCCCAACAACTTACTACCTTCCATGCATTATTT 1197 Query 1442 GGCTCGTTCTCAAGAAACCAAAGAGGTTTGGTCTATCTTGGACAGCTAACTGGTTCTGCA 1501 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1198 GGCTCGTTCTCAAGAAACCAAAGAGGTTTGGTCTATCTTGGACAATTAACTGGTTCTGCA 1257 Query 1502 TCATAGTAGGAGTTCTTTTGACGATCCTTGCCCCAATTGGAGGACTCAGAACCATCATTA 1561 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 1258 TCATAGTAGGAGTTCTTTTGACGATCCTAGCCCCAATTGGAGGTCTCAGAACCATCATTA 1317 Query 1562 TCAACGCCAAGACCTACAAGTTCTTCTCTTAGATGGATCACttttt 1607 ||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 1318 TCAACGCCAAGACGTACAAGTTCTTCTCTTAGATCGATCACTTTTT 1363 > Ahg908321 jgi|Araly1|908321|Al_scaffold_0002_1402 Length=1329 Score = 1000 bits (541), Expect = 0.0 Identities = 1053/1300 (81%), Gaps = 36/1300 (3%) Strand=Plus/Plus Query 310 AAGCAGAAGAACGTCGACGATTGGTTACCGATCACATCTTCCAGAAACGCTAAGTGGTGG 369 ||||||||||| || || || ||||| ||||| || || || ||||| || || |||||| Sbjct 46 AAGCAGAAGAATGTAGATGACTGGTTGCCGATAACGTCCTCTAGAAATGCCAAATGGTGG 105 Query 370 TACTCTGCTTTTCACAATGTCACCGCCATGGTTGGTGCTGGTGTTCTTAGCTTGCCCTAC 429 |||||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||| Sbjct 106 TACTCTGCGTTTCACAATGTCACCGCCATGGTCGGAGCTGGTGTGCTCAGCTTACCCTAC 165 Query 430 GCTATGTCCAATCTCGGATGGGGACCTGGAGTGACGATTATGGTGATGTCATGGATCATA 489 || |||||||| || |||||||||||||||||||| || ||| | ||||||||| | ||| Sbjct 166 GCCATGTCCAACCTTGGATGGGGACCTGGAGTGACAATAATGATAATGTCATGGCTGATA 225 Query 490 ACGTTGTACACACTGTGGCAAATGGTGGAGATGCATGAGATTGTTCCAGGGAAGAGGCTT 549 || || |||||| | ||||| |||||| | ||||||||||| ||||||||||||||| || Sbjct 226 ACATTTTACACAATATGGCAGATGGTGCAAATGCATGAGATGGTTCCAGGGAAGAGG-TT 284 Query 550 -GATAGGTATCACGAGCTAGGTCAACACGCTTTTGGTGAAAAGCTTGGCCTATGGATCGT 608 || ||||| || || ||||||||||||| ||||| || |||||||| || |||||||| Sbjct 285 CGACAGGTACCATGAATTAGGTCAACACGCGTTTGGGGAGAAGCTTGGACTCTGGATCGT 344 Query 609 CGTGCCGCAGCAGCTTATCGTGGAGGTCGGTGTTGACATCGTTTATATGGTCACAGGAGG 668 ||||| || || || ||||| || || ||||| || || || || ||||| || ||||| Sbjct 345 GGTGCCACAACAACTAATCGTTGAAGTAGGTGTGGATATTGTATACATGGTTACGGGAGG 404 Query 669 AGCA-TCCCTCAAGAAAGTCCATCAACTAGTCTGT-C-CCGATTGCAAAGAGATCAGAAC 725 | | || | || ||| ||||| | || ||| | | ||||||||||| | || ||||| Sbjct 405 -GAAGTCATTGAAAAAAATCCATGACCT--TCTTTGCACCGATTGCAAAAATATAAGAAC 461 Query 726 TACGTTTTGGATCATGATCTTTGCTTCCGTCCACTTTGTTATCT-CTCACCTTCCC-AA- 782 | | | ||||||||||||||| |||||| | ||||||||| | | |||| | |||| || Sbjct 462 TTCATATTGGATCATGATCTTCGCTTCCATACACTTTGTTCT-TGCTCATC-TCCCTAAC 519 Query 783 TTTCAACTCTATCTCCATCATCTCACTTGCCGCGGCTGTTATGTCCTT-AACTTACTCAA 841 ||| |||||||| || ||| |||| ||||| || || |||||||| || | | || || | Sbjct 520 TTT-AACTCTATGTCTATCGTCTCCCTTGCTGCTGCCGTTATGTCTTTGAGC-TATTCGA 577 Query 842 CTATTGCTTGGGCTGCATCCGTGCACAAAGGGGTACATCCAGATGTGGACTACTC-TCCT 900 | || |||||||| | || ||| | ||||| || |||||| |||| |||||||| | || Sbjct 578 CAATCGCTTGGGCAACCTCGGTGAAGAAAGGAGTTCATCCAAATGTAGACTACTCGT-CT 636 Query 901 AGAGCATCAACCGATGT-TGGAAAAGTATTCAACTTCTTGAATGCGTTGGGAGATGTGGC 959 |||||||| | ||| | ||||| |||||||||||||||||||| | ||||||||||| Sbjct 637 AGAGCATCTA-CGACCTCAGGAAATGTATTCAACTTCTTGAATGCACTAGGAGATGTGGC 695 Query 960 TTTTGCTTATGCAGGTCACAACGTTGTGTTGGAGATTCAGGCCACAATCCCTTCGACTCC 1019 ||||| ||||||||||||||||| |||||||||||||| || || || ||||| ||||| Sbjct 696 ATTTGCGTATGCAGGTCACAACGTCGTGTTGGAGATTCAAGCTACTATTCCTTCAACTCC 755 Query 1020 GGAGATGCCATCCAAGGTCCCAATGTGGAGAGGAGTTATTGTAGCCTACATTGTAGTCGC 1079 |||| ||||| ||| | ||||||||| ||||||| | || ||||| | || ||||| Sbjct 756 TGAGAAACCATCAAAGATTGCAATGTGGAAAGGAGTTGTAGTTGCCTATGTCGTGGTCGC 815 Query 1080 CATCTGTTACTTCCCTGTAGCATTCCTCGGCTATTATATCTTTGGAAACAGCGTTGATGA 1139 ||| || |||||||| || |||||| | |||| ||||| ||||||||||| || || || Sbjct 816 CATATGCTACTTCCCCGTTGCATTCGTTTGCTACTATATTTTTGGAAACAGTGTGGACGA 875 Query 1140 CAACATCCTCATCACTTTGGAGAAGCCTATCTGGCTTATTGCTATGGCTAACATGTTCGT 1199 ||| || ||||| || ||| |||| || ||||||||||| || || |||||| ||||| Sbjct 876 CAATATTCTCATGACGTTGCAGAAACCCATCTGGCTTATCGCCATTGCTAACGCATTCGT 935 Query 1200 GGTTATCCATGTCATTGGAAGCTATCAGATATTTGCAATGCCAGTTTTTGACATGCTCGA 1259 |||| |||||||||||||||||||||| |||| |||||||| || ||||||||||| || Sbjct 936 GGTTGTCCATGTCATTGGAAGCTATCAAATATACGCAATGCCGGTCTTTGACATGCTTGA 995 Query 1260 AACCGTTTTGGTCAAA-AAGATGAAT-TTCAATCCTTCTTTCAAGCTCCGCTTCATTACT 1317 |||| ||||||| ||| |||||| || ||| ||| || ||||| ||||||||||| ||| Sbjct 996 AACCTTTTTGGT-AAAGAAGATG-ATGTTCGCTCCGTCCTTCAAACTCCGCTTCATCACT 1053 Query 1318 CGTAGTCTTTACGTCGCTTTCACGATGATTGTTGCGATATGCGTCCCGTTTTTCGGTGGA 1377 |||| ||| || || |||||||||||| ||||||| |||||| |||| ||||| |||||| Sbjct 1054 CGTACTCTATATGTTGCTTTCACGATGTTTGTTGCTATATGCATCCCATTTTTTGGTGGA 1113 Query 1378 CTACTCGGCTTCTTTGGAGGATTCGCCTTTGCCCCAACAACTTACTACCTTCCATGCATT 1437 ||||||| || ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1114 TTACTCGGTTTTTTTGGAGGATTCGCCTTTGCCCCAACAACTTACTATCTACCATGCATC 1173 Query 1438 ATGTGGCTC-GTTCTCAAGAAACCAAAGAGGTTTGG-TCTATCTTGGAC-AGCTAACTGG 1494 |||||||| || ||||||||||||||| || ||| | | |||||| | ||| ||| Sbjct 1174 ATGTGGCTTTGTA-TCAAGAAACCAAAGAAGTATGGAT-TGTCTTGGTGTAT-TAATTGG 1230 Query 1495 TTCTGCATCA-TAGTAGGAGTTCTTTTGACGATCCTTGC-CCCAATTGGAGGACTCAGAA 1552 || ||||| | |||| || ||| | ||||||||| | || |||| |||| || ||||||| Sbjct 1231 TTTTGCAT-AGTAGTTGGTGTTATATTGACGATCGTAGCTCCCA-TTGGTGGCCTCAGAA 1288 Query 1553 CCATCATTATCA-ACGCCAAGACCTACAAGTTCTTCTCTT 1591 |||| |||||| | ||||| | |||||| |||||||||| Sbjct 1289 CCATTATTATCTCA-GCCAAAAACTACAAATTCTTCTCTT 1327 > Ahg947663 jgi|Araly1|947663|scaffold_703892.1 Length=1388 Score = 475 bits (257), Expect = 4e-133 Identities = 872/1160 (75%), Gaps = 78/1160 (7%) Strand=Plus/Plus Query 323 TCGACGATTGGTTACCGATCACATCTTCCAGAAACGCTAAGTGGTGGTACTCTGCTTTTC 382 |||| ||||||||||| || || || || ||||| ||||||||||||||||||||||||| Sbjct 97 TCGATGATTGGTTACCAATTACTTCATCAAGAAATGCTAAGTGGTGGTACTCTGCTTTTC 156 Query 383 ACAATGTCACCGCCATGGTTGGTGCTGGTGTTCTTAG-CTTGCCCT-ACGCTATGTC-CA 439 ||||||||||||||||||| ||||| || |||||| | || |||| |||| ||||| || Sbjct 157 ACAATGTCACCGCCATGGTCGGTGCCGGAGTTCTTGGACT--CCCTTACGCCATGTCTCA 214 Query 440 ATCTCGGATGGGGACCTGGAGT-GACGATTAT-GGTGATGTCATGGATCATAACGTTGTA 497 |||||||||||||| ||| | | | | | | ||| | |||||| ||||||| | || Sbjct 215 G-CTCGGATGGGGACCAGGAATTG-C-AGTGTTGGTTCTATCATGGGTCATAACACTATA 271 Query 498 CACACTGTGGCAAATGGTGGAGATGCATGAGATTGTTCCAGGGAAGAGGCTTGATAGGTA 557 |||| | |||||||||||||| |||||||| || ||||| |||||| | ||||| | || Sbjct 272 CACATTATGGCAAATGGTGGAAATGCATGAAATGGTTCCTGGGAAGCGTTTTGATCGTTA 331 Query 558 TCACGAGCTAGGTCAACACGCTTTTGGTGAAAAGCTTGGCCTATGGATCGTCGTGCCGCA 617 || ||||| || |||||||| ||||| || ||||| || || | ||||| |||||||| Sbjct 332 CCATGAGCTTGGACAACACGCGTTTGGAGAGAAGCTCGGTCTTTATATCGTTGTGCCGCA 391 Query 618 GCAGCTT-ATCGTGGAGGTCGGTGTT-GACATCGTTTATATGGTCACAGGAGG-AGCATC 674 || || ||||| || |||||||| | |||||||||||||||||| ||||| | ||| Sbjct 392 ACAA-TTGATCGTTGAAATCGGTGTTTG-CATCGTTTATATGGTCACTGGAGGCAA-ATC 448 Query 675 CCTCAAGAAAGTCCATCAACTAGTCTGTCCCGATTGCAAAG-AGATCAGAACT-ACGT-T 731 | |||||| | ||| | || || ||| |||||| ||| | |||| |||| || | | Sbjct 449 TTTAAAGAAATTTCATGAGCTTGTTTGTGACGATTGTAAACCA-ATCA-AACTTACTTAT 506 Query 732 TTGGATCATGATCTTTGCTTCCGTCCACTTTGTTATCTCTCACCTTCCCAATTTCAACTC 791 || ||||||||||||||||| || ||||| || ||||||| |||||||||||||| || Sbjct 507 TTC-ATCATGATCTTTGCTTCTGTTCACTTCGTCCTCTCTCATCTTCCCAATTTCAATTC 565 Query 792 TATCTCCATCATCTCACTTGCCGCGGCTGTTATGTC-CTTAACTTACTCAACTATTGCTT 850 |||||| | | || ||||| || || |||||||| || | || ||||||| || || | Sbjct 566 CATCTCCGGCGTTTCTCTTGCTGCTGCCGTTATGTCTCTCAGCT-ACTCAACAATCGCAT 624 Query 851 GGGC-TGCATCCGTGCA--CAAAGGGGTACATCCAGATGTGGACTACTCTCCTAGAGC-A 906 |||| | |||| | || |||||| || || ||| || | ||| | || ||| | Sbjct 625 GGGCAT-CATCAG--CAAGCAAAGGCGTTCAAGAAGACGTTCAATACGGTTATAAAGCGA 681 Query 907 T--CAACCGATGTTGGAAAAGTATTCAACTTCTTGAATGCG-TTG-GGAGATGTGGCTTT 962 |||| | | || | ||| ||||| ||||| | ||| || || |||||||| || Sbjct 682 AAACAAC--A-GCCGGTACAGTTTTCAATTTCTTCA--GCGGTTTAGGTGATGTGGCATT 736 Query 963 TGCTTATGCAGGTCACAACGTTGTG-TTGGAGATTCAGGCCACAATCCCTTCGACTCCGG 1021 |||||| || ||||| || || || ||| |||| || || || |||||||| || || | Sbjct 737 TGCTTACGCGGGTCATAATGTGGTCCTTG-AGATCCAAGCAACTATCCCTTCAACGCCTG 795 Query 1022 AGATGCCATCCAA-GGTCCCAATGTGGAGAGGAGTTATTGTAGCCTACATTGTAGTCGC- 1079 ||| || || || ||||||| ||||||||||||| || || || || || || || || Sbjct 796 AGAAACCCTCAAAAGGTCCCA-TGTGGAGAGGAGTCATCGTTGCTTATATCGTCGTTGCG 854 Query 1080 CATCTGTTACTTCCCTGTAGCAT-TCCTCGGCTATTATATCTTT-GGAAACAGCGTTGAT 1137 | ||||||| |||||||| || | | |||| |||||||| ||| || ||| | || || Sbjct 855 C-TCTGTTATTTCCCTGTGGC-TCTAGTCGGATATTATAT-TTTCGGGAACGGAGTGGAA 911 Query 1138 GACAACATCCTCAT--CACTTTGGAGAAGCCTATC-TGGCTTATT-GCTATGGCTAACAT 1193 || ||||| ||||| ||||| || || || | ||| ||| | || | || ||||| Sbjct 912 GATAACATTCTCATGTCACTTAAGA-AA-CCGG-CGTGG-TTAATCGCGACAGCGAACAT 967 Query 1194 GTTCGTGGTTATCCATGTCATTGGAAGCTATCAGATATTTGCAATGCCAGTTTTTGACAT 1253 ||||| || ||||||||||| || || || ||||||| ||||||||| || ||||| || Sbjct 968 CTTCGTCGTGATCCATGTCATCGGTAGTTACCAGATATATGCAATGCCGGTATTTGATAT 1027 Query 1254 GCTCGAAACCGTT-TTGGTCAAAAAGATGAATTTCA-ATCCTTCTTTCAAGCTC--CGCT 1309 | | || || || |||||||| ||| | ||||||| | || | ||| ||| || | Sbjct 1028 GATGGAGACT-TTATTGGTCAAGAAGCTAAATTTCAGA-CCAACCA-CAA-CTCTTCGGT 1083 Query 1310 TCATTACTC-GTAGTCTT-TACGTCGCTTTCA-CGATGATTGTTGCGATATG-CGTC-CC 1364 || || || ||| | || ||||| ||| || | ||| |||||| | |||| | | || Sbjct 1084 TCTTTG-TCCGTAAT-TTCTACGTTGCTG-CAACTATGTTTGTTG-G-TATGACCTTTCC 1138 Query 1365 GTTTTTCGGTGGACTACTCGGC-TTCTTTGGAGGATTCGCCTTTGCCCCAACAACTTACT 1423 ||| ||||| || || | ||| |||||||| |||||||| ||||| ||||| || |||| Sbjct 1139 GTTCTTCGGAGGGCTTTT-GGCGTTCTTTGGTGGATTCGCGTTTGCTCCAACCACATACT 1197 Query 1424 ACCTTCCATGCATTATGTGG 1443 ||| || ||||| || ||| Sbjct 1198 TCCTCCCTTGCATCATTTGG 1217 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65629492135 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5