BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G24764.1
Length=2472
Score E
Sequences producing significant alignments: (Bits) Value
Ahg921711 jgi|Araly1|921711|scaffold_102992.1 3284 0.0
Ahg475917 jgi|Araly1|475917|fgenesh2_kg.2__1047__AT1G68060.1 1956 0.0
> Ahg921711 jgi|Araly1|921711|scaffold_102992.1
Length=1945
Score = 3284 bits (1778), Expect = 0.0
Identities = 1891/1946 (97%), Gaps = 5/1946 (0%)
Strand=Plus/Plus
Query 81 CAAAGGAATCAGATCGGAGATGTCGGATGTTTCCGGTGACGGAGATTTATCGGCGACGGT 140
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3 CAAAGG-ATCAGATCGGAGATGTCGGATGTTTCCGGTGACGGAGATGTATCGGCGACGGT 61
Query 141 TACTGAACATGAAGTAACTCCACAACCGCCGGTTTCTTCGGCGACGTATCCGTCATTAAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 62 TACTGAACATGAAGTAACTCCACAACCGCCGGTTTCTTCGGCGACGTATCCGTCACTGAC 121
Query 201 GGTGTCGGCGTCTTACAAAGAGAGCAGCGGAGGTAAAAGCTCGTCGAAGAGGAGACCAAT 260
||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 122 GGTGTCGGCGTCTTATAAAGAGAGCGGCGGAGGTAAAAGCTCGTCGAAGCGGAGACCAAT 181
Query 261 AAGGCCGAGTTTCGACGCTGCGGCTGATAATGAGTTTATTACTTTGCTTCATGGCTCGGA 320
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 182 TAGGCCGAGTTTCGACGCTGCGGCTGATAATGAGTTTATTACTTTGCTTCATGGTTCGGA 241
Query 321 TCCAGTGAAAGTGGAGCTTAATCGACTAGAGAATGAAGTTAGAGATAAGGATCGGGAGTT 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 242 TCCAGTGAAAGTGGAGCTTAATCGACTAGAGAATGAAGTTAGAGATAAGGATCGGGAGTT 301
Query 381 AGGAGAAGCAAACGCTGAGATCAAAGCGCTTAGGTTGTCTGAGAGACAAAGAGAGAAAGC 440
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 GGGAGAAGCACACGCTGAGATCAAAGCGCTTAGGTTGTCTGAGAGACAAAGAGAGAAAGC 361
Query 441 TGTTGAAGAGCTTACTGAGGAGCTTACTAAGTTGGATGAGAAGCTCAAGTTGACTGAATC 500
||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||
Sbjct 362 TGTTGAAGAGCTTACTGAGGAGCGTGCTAAGTTGGATGAGAAGCTCAAGTTGACCGAATC 421
Query 501 CATTCTCGAAAGCAAAAATCTAGAAATCAAGAAAATCAATGAGGAAAAGAAAGCATCAAT 560
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 422 CATTCTCGAAAGCAAAAATCTAGAAATCAAGAAAATCAATGAGGAAAAGAAGGCATCAAT 481
Query 561 GGCTGCTCAGTTTGCTGCTGAAGCCACTTTAAGAAGAGTCCATGCTGCTCAAAAGGATGA 620
||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||
Sbjct 482 GGCTGCTCAGTTTGCTGTTGAAGCCACCTTAAGAAGGGTCCATGCTGCTCAAAAGGATGA 541
Query 621 TGACATGCCTCCTATTGAAGCCATCCTTGCTCCATTAGAAGCTGAACTTAAGCTTGCACG 680
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 542 TGACATGCCTCCGATTGAAGCCATCCTTGCTCCATTAGAAGCTGAACTTAAGCTTGCACG 601
Query 681 ATCAGAGATTGGAAAGCTTCAAGAAGATAACAGGGCTTTGGACCGTCTGACTAAATCAAA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 ATCAGAGATTGGAAAGCTTCAAGAAGATAACAGGGCTTTGGACCGTCTGACTAAATCAAA 661
Query 741 GGAAGCTGCCTTACTTGAAGCTGAGAGGACCGTTGAAGCTGCCATGGCAAAAGCCGCTAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 662 GGAAGCTGCCTTACTTGAAGCTGAGAGGACCGTTGAAGCTGCCATGGCAAAAGCCGCCAT 721
Query 801 GGTTGATGATCTTCAGAATAAGAACCAGGAGCTAATGAAGCAAATTGAAATCTGTCAGGA 860
||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 722 GGTTGATGATCTTCAAAATAAGAACCAGGAGCTTATGAAACAAATAGAAATCTGTCAGGA 781
Query 861 AGAAAACAAAATTCTAGATAGAATGCATAGGCAGAAGGTTGCTGAAGTGGAAAAGCTTAC 920
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 782 AGAAAACAAAATTCTAGACAGAATGCACAGGCAGAAGGTTGCTGAAGTGGAAAAGCTTAC 841
Query 921 TCAGACAGTACGAGAGCTAGAAGAGGCTGTTCTTGCAGGTGGTGCTGCTGCAAATGCCGT 980
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 842 TCAGACAGTACGAGAGCTGGAAGAGGCTGTTCTTGCAGGTGGTGCTGCTGCAAATGCCGT 901
Query 981 GAGGGATTACCAGCGGAAATTTCAAGAGATGAATGAAGAGCGGAAAACTCTTGACCGGGA 1040
|||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 902 GAGGGACTACCAGCGGAAATTTCAAGAGATGAATGAAGAACGGAAAACTCTTGATCGGGA 961
Query 1041 GCTTGCACGTGCAAAGGTTACAGCAAACAGAGTTGCCACTGTGGTAGCAAATGAGTGGAA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 GCTTGCACGTGCAAAGGTTACAGCAAACAGAGTTGCCACTGTGGTAGCAAATGAGTGGAA 1021
Query 1101 AGATGGTAATGATAAAGTGATGCCTGTGAAGCAATGGCTCGAAGAACGAAGGTTTCTACA 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022 AGATGGTAATGATAAAGTGATGCCTGTGAAGCAATGGCTCGAAGAACGAAGGTTTCTACA 1081
Query 1161 GGGAGAAATGCAGCAACTTCGTGATAAGCTCGCCATAACAGACCGGGCTGCAAAATCCGA 1220
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1082 GGGAGAAATGCAGCAACTTCGTGATAAGCTCGCCATAACAGACCGAGCTGCTAAATCCGA 1141
Query 1221 GGCACAGTTAAAAGAGAAGTTTCAACTGCGGCTTAAAGTGCTTGAGGAGACACTTCGAGG 1280
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1142 GGCACAGTTAAAAGAAAAGTTTCAACTGCGGCTTAAAGTGCTTGAGGAGACACTTCGAGG 1201
Query 1281 AACTTCAAGCAGC-GCCACCAGGAACACACCCGAGGCAAGAAGCATGAGTAATGGACCTT 1339
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202 AACTTCAAGCAGCAGC-ACCAGGAACACACCCGAGGCAAGAAGCATGAGTAATGGACCTT 1260
Query 1340 CTCGCAGGCAGTCGCTTGGTGGAGCTGAAAACTTACAAAAATTTACATCAAACGGTGCTT 1399
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1261 CTCGCAGGCAGTCGCTTGGTGGAGCTGAAAACTTACAAAAATTTCCATCAAACGGTGCTT 1320
Query 1400 TATCAAAGAAAGCTCCAGCATCTCAGATGAGGCATTCATTGTCTATTAATTCAACTTCGG 1459
|||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||| |
Sbjct 1321 TATCAAAGAAAGCTCCGGCATCTCAAATGAGACATTCCTTGTCTATTAATTCAACTTCTG 1380
Query 1460 TGTTGAAGAATGCTAAAGGAACATCTAAGTCATTTGATGGAGGCACAAGATCCGTGGATA 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1381 TGTTGAAGAATGCTAAAGGAACATCTAAGTCATTTGATGGAGGCACAAGATCCTTGGATA 1440
Query 1520 GAGGCAAAGCACTTTTAAACGGACCTGGGAATTATTCCTTCAACAAGGCTACTGATGACT 1579
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1441 GAGGCAAAGCACTTTTAAACGGCCCTGGGAATTATTCCTTCAACAAGGCTACTGATGACT 1500
Query 1580 CTAAGGAAGCAGAGTCAGGTAATGGGTGGAAAGAAAATTCAGAGGAGAAGCCACAAAGTG 1639
|||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||
Sbjct 1501 CTAAGGAAGCAGAGTCGGGAAATGGGTGGAAAGAAAATTCAGAGGAAAAGCCACAAAGTG 1560
Query 1640 AAGACCCTGAAGCAGCAACTGAGGACAGTGTCCCTGGTGTTTTGTATGATTTACTACAGA 1699
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1561 AAGACCCTGAAGCAGCAACTGAGGACAGTGTCCCAGGTGTCTTGTATGATTTACTACAGA 1620
Query 1700 AAGAAGTAGTTTCTTTGAGGAAAGCCTCTAATGAAAAGGATCAAAGCCTCAAAGACAAAG 1759
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1621 AAGAAGTAGTTTCTTTGAGGAAAGCCTCTAATGAAAAGGATCAAAGTCTCAAAGACAAAG 1680
Query 1760 ATGATGCCATCGAGATGCTAGCGAAGAAGGTGGAAACATTAACAAAGGCAATGGAGGTTG 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681 ATGATGCCATCGAGATGCTAGCGAAGAAGGTGGAAACATTAACAAAGGCAATGGAGGTTG 1740
Query 1820 AAGCAAAGAAGATGAGACGGGAAGTAGCTGCAATGGAAAAAGAAGTTGCTGCAATGCGTG 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1741 AAGCAAAGAAGATGAGACGGGAAGTAGCTGCAATGGAAAAAGAAGTTGCTGCAATGCGTG 1800
Query 1880 TGGAGAAAGATCAGGACGCCAGAGCCAAAAGGTTTTCAAATAGCAAGAGCCCATCCAACA 1939
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1801 TTGAGAAAGATCAGGACGCCAGAGCCAAAAGGTTTTCAAATAGCAAGAGCCCTTCCAACA 1860
Query 1940 CCGCCCAGATTCTTGCGGGAAGAGCTGCTGGACGAAGTGGCGGGTTAACGAAGAGTACCC 1999
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1861 CCGCCCAGATTCTTGCGGGAAGAGCTGCTGGACGAAGTGGTGGGTTAACGAAGAGTACCC 1920
Query 2000 AGTGAAG-GGAGATTCAAGAAAATAA 2024
||||| | |||||||| |||||||||
Sbjct 1921 AGTGA-GTGGAGATTCCAGAAAATAA 1945
> Ahg475917 jgi|Araly1|475917|fgenesh2_kg.2__1047__AT1G68060.1
Length=2517
Score = 1956 bits (1059), Expect = 0.0
Identities = 1544/1779 (87%), Gaps = 30/1779 (2%)
Strand=Plus/Plus
Query 235 AAAAGCTCGTCGAAGAGGAGACCAATAAGGCCGAGTTTCGACGCTGCGGCTGATAATGAG 294
||||| ||| || ||||||||| | ||||| ||||| || || || ||||||||||||
Sbjct 364 AAAAGTTCGGGGAGGAGGAGACCGGTTAGGCCTAGTTTTGATGCAGCTGCTGATAATGAG 423
Query 295 TTTATTACTTTGCTTCATGGCTCGGATCCAGTGAAAGTGGAGCTTAATCGACTAGAGAAT 354
|||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct 424 TTTATTACTTTGCTTCATGGTTCGGATCCAGTGAAAGTTGAGCTTAATCGGCTTGAGAAT 483
Query 355 GAAGTTAGAGATAAGGATCGGGAGTTAGGAGAAGCAAACGCTGAGATCAAAGCGCTT-AG 413
|||||||||||||||||||| || ||| | |||||| | ||||||||||||||| || ||
Sbjct 484 GAAGTTAGAGATAAGGATCGAGAATTAAGTGAAGCACATGCTGAGATCAAAGCG-TTGAG 542
Query 414 GTTGTCTGAGAGACAAAGAGAGAAAGC-TGTTGAAGAGCTTACTGAGGAGCTTACTAAGT 472
||| |||||||| |||||||||||||| || ||||||||||||||| |||||| ||||||
Sbjct 543 GTTATCTGAGAGGCAAAGAGAGAAAGCTTG-TGAAGAGCTTACTGATGAGCTTGCTAAGT 601
Query 473 TGGATGAGAAGCTCAAGTTGACTGAATC-CATTCTCGAAAGCAAAAATCTAGAAATCAAG 531
|||||| ||||||||||||||||||||| | ||||| ||||||||||||||||||| |||
Sbjct 602 TGGATGGGAAGCTCAAGTTGACTGAATCGC-TTCTCCAAAGCAAAAATCTAGAAATTAAG 660
Query 532 AAAATCAATGAGGAAAAGAAAGCATCAATGGCTGCTCAGTTTGCTGCTGAAGCCACTTTA 591
|| ||||||||||||||||| || || |||||||||||||||||||||||||| || |||
Sbjct 661 AAGATCAATGAGGAAAAGAAGGCTTCCATGGCTGCTCAGTTTGCTGCTGAAGCTACCTTA 720
Query 592 AGAAGAGTCCATGCTGCTCAAAAGGATGATGACATGCCTCCTATTGAAGCCATCCTTGCT 651
||||| |||||||||||||||||||||||||| |||||||| ||||||||||| || ||
Sbjct 721 AGAAGGGTCCATGCTGCTCAAAAGGATGATGATATGCCTCCGATTGAAGCCATTCTAGCC 780
Query 652 CCATTAGAAGCTGAACTTAAGCTTGCACGATCAGAGATTGGAAAGCTTCAAGAAGATAAC 711
|| |||||||||||||||||||| || || || |||||||| ||||||||||||||||||
Sbjct 781 CCGTTAGAAGCTGAACTTAAGCTAGCTCGCTCTGAGATTGGGAAGCTTCAAGAAGATAAC 840
Query 712 AGGGCTTTGGACCGTCTGACTAAATCAAAGGAAGCTGCCTTACTTGAAGCTGAGAGGACC 771
|| || ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct 841 AGAGCCTTGGATCGTCTCACTAAATCAAAAGAAGCGGCCTTGCTTGATGCTGAGAGGACT 900
Query 772 GTTG-AAGCTGC-CATGGCAAAAGCCGCTATGGTTGATGATCTTCAGAATAAGAACCAGG 829
|||| ||| ||| | |||||||||| ||| | |||||||||||||| ||||||||||| |
Sbjct 901 GTTGAAAG-TGCTC-TGGCAAAAGCTGCTTTAGTTGATGATCTTCAAAATAAGAACCAAG 958
Query 830 AGCTAATGAAGCAAATTGAAATCTGTCAGGAAGAAAACAAAATTCTAGATAGAATGCATA 889
|| | ||||| ||||| |||||||||||||||||||||||||||||||| ||||||| |
Sbjct 959 AGTTGATGAAACAAATAGAAATCTGTCAGGAAGAAAACAAAATTCTAGACCGAATGCACA 1018
Query 890 GGCAGAAGGTTGCTGAAGTGGAAAAGCTTACTCAGACAGTACGAGAGCTAGAAGAGGCTG 949
|||| ||||||||||| |||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct 1019 GGCAAAAGGTTGCTGAGGTGGAAAAGCTTACTCAGACTGTACGTGAGCTGGAAGAGGCCG 1078
Query 950 TTCTTGCAGGTGGTGCTGCTGCAAATGCCGTGAGGGATTACCAGCGGAAATTTCAAGAGA 1009
||||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1079 TTCTTGCTGGCGGAGCTGCTGCAAATGCCGTGAGGGATTACCAGCGGAAGTTTCAAGAGA 1138
Query 1010 TGAATGAAGAGCGGAAAACTCTTGACCGGGAGCTTGCACGTGCAAAGGTTACAGCAAACA 1069
|||| ||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1139 TGAACGAAGAACGAAAAACTCTTGACCGGGAACTTGCGCGTGCAAAGGTTACAGCAAACA 1198
Query 1070 GAGTTGCCACTGTGGTAGCAAATGAGTGGAAAGATGGTAATGATAAAGTGATGCCTGTGA 1129
||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1199 GAGTTGCGACGGTGGTTGCAAATGAATGGAAAGATGGTAATGATAAAGTGATGCCTGTGA 1258
Query 1130 AGCAATGGCTCGAAGAACGAAGGTTTCTACAGGGAGAAATGCAGCAACTTCGTGATAAGC 1189
|||||||||| |||||| ||||||||||||||||||||||||||||||| || |||||||
Sbjct 1259 AGCAATGGCTTGAAGAAAGAAGGTTTCTACAGGGAGAAATGCAGCAACTCCGCGATAAGC 1318
Query 1190 TCGCCATAACAGACCGGGCTGCAAAATCCGAGGCACAGTTAAAAGAGAAGTTTCAACTGC 1249
| |||||| |||| || ||||| ||||| || ||||| ||||||| ||||||||||| |
Sbjct 1319 TTGCCATATCAGATCGAGCTGCGAAATCTGAAGCACAACTAAAAGACAAGTTTCAACTAC 1378
Query 1250 GGCTTAAAGTGCTTGAGGAGACACTTCGAGGAACTTCAAGCAGC-GCCACCAGGAACACA 1308
| |||||||||||||| |||||||| |||| || ||||||| | || | |||| ||||
Sbjct 1379 GACTTAAAGTGCTTGAAGAGACACTGAGAGGCACCTCAAGCATCAGC-ATAAGGAGCACA 1437
Query 1309 CCCGAGGCAAGAAGCATGAGTAATGGACCTTCTCGCAGGCAGTCGCTTGGTGGAGCTGAA 1368
|| |||| ||||||||||||||||||||| |||||||||||||| | |||||| | ||
Sbjct 1438 CCTGAGGGAAGAAGCATGAGTAATGGACCGTCTCGCAGGCAGTCAATCGGTGGATCAGAT 1497
Query 1369 AACTTACAAAAATTTACATCAAACGG-TGCTTTATCAAAGAAAGCTCCAGCATCTCAGAT 1427
|| |||||||| || ||||||| || | ||| ||||||||| |||| | || |||
Sbjct 1498 AATTTACAAAAGTTCGCATCAAATGGCTT-TTTGTCAAAGAAAACTCC-G-ATG--AGAA 1552
Query 1428 GAGGCATTCATTGTCTATTAATTCAACTTCGGTGTTGAAGAATGCTAAAGGAACATCTAA 1487
| | || | | |||| | ||| || ||||| ||||||||||||||||||||||| ||
Sbjct 1553 -ATTCCTTTAAT-TCTA--A-TTCCACCTCGGTATTGAAGAATGCTAAAGGAACATCCAA 1607
Query 1488 GTCATTTGATGGAGGCACAAGATCCGTGGATAGAGGCAAAGCACTTTTAAACGGACCTGG 1547
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 1608 GTCATTTGATGGAGGCACAAGATCATTGGATAGAGGCAAAGCACTCTTAAACGGACCTGG 1667
Query 1548 GAATTATTCCTTCAACAAGGCTACTGATGACTCTAAGGAAGCAGAGTCAGGTAATGGGTG 1607
|||||||| ||||||||| || |||||| | || ||| |||||||| |||| ||
Sbjct 1668 AAATTATTCGTTCAACAAGACTTGTGATGAAACCAAAGAATCAGAGTCACCTAATACCTG 1727
Query 1608 GAAAGAAAATTCAGAGGAGAAGCCACAAAGTGAAGACCCTGAAGCAGCAACTGAGGACAG 1667
||||||| ||||||| |||||||||| ||||||| ||||| | |||||||||| ||||
Sbjct 1728 GAAAGAAGATTCAGAAGAGAAGCCACCAAGTGAACTCCCTGCACCAGCAACTGAAGACAA 1787
Query 1668 TGTCCCTGGTGTTTTGTATGATTTACTACAGAAAGAAGTAGTTTCTTTGAGGAAAGCCTC 1727
|||||| || ||||||||||||||||||||||| |||||||| | ||||| ||| | ||
Sbjct 1788 TGTCCCAGGGGTTTTGTATGATTTACTACAGAAGGAAGTAGTAGCCTTGAGAAAATCTTC 1847
Query 1728 TAATGAAAAGGATCAAAGCCTCAAAGACAAAGATGATGCCATCGAGATGCTAGCGAAGAA 1787
|||| ||||||||||||||||||||||| ||||||||||| |||||| |||| || ||
Sbjct 1848 GCATGAGAAGGATCAAAGCCTCAAAGACAAGGATGATGCCATAGAGATGTTAGCAAAAAA 1907
Query 1788 GGTGGAAACATTAACAAAGGCAATGGAGGTTGAAGCAAAGAAGATGAGACGGGAAGTAGC 1847
||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 1908 GGTTGAAACTTTAACAAAGGCAATGGAGGTTGAAGCGAAGAAGATGAGAAGGGAAGTAGC 1967
Query 1848 TGCAATGGAAAAAGAAGTTGCTGCAATGCGTGTGGAGAAAGATCAGGACGCCAGAGCCAA 1907
||||||||| ||||| |||||||||||||||||||| |||||||| || |||||| ||
Sbjct 1968 TGCAATGGAGAAAGAGGTTGCTGCAATGCGTGTGGATAAAGATCAAGATAACAGAGCTAA 2027
Query 1908 AAGGTTTTCAAATAGCAAGAGCC-CATCCAACACCGCCCAGATTCTTGCGGGAAGAGCTG 1966
||||| |||||| | ||| | || ||||||||||||||||||||||||| | ||||||||
Sbjct 2028 AAGGTCTTCAAACACCAA-ACCCTCATCCAACACCGCCCAGATTCTTGCTGCAAGAGCTG 2086
Query 1967 CTGGACGAAGTGGCGGGTTAACGAAG-AGTACCCAGTGA 2004
|||| |||||||| | ||||| ||| ||||| || |||
Sbjct 2087 CTGGCCGAAGTGG-G--TTAAC-AAGGAGTACACAATGA 2121
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93168739270
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5