BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT1G25150.1

Length=1526
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg472870 jgi|Araly1|472870|fgenesh2_kg.1__2824__AT1G25141.1        1194    0.0  
  Ahg912493 jgi|Araly1|912493|Al_scaffold_0001_2747                   1171    0.0  
  Ahg921649 jgi|Araly1|921649|scaffold_102930.1                        363    3e-99
  Ahg479142 jgi|Araly1|479142|fgenesh2_kg.3__1843__AT3G16740.1         104    2e-21
  Ahg485308 jgi|Araly1|485308|fgenesh2_kg.5__1300__AT3G49510.1        82.4    9e-15


> Ahg472870 jgi|Araly1|472870|fgenesh2_kg.1__2824__AT1G25141.1
Length=3192

 Score = 1194 bits (646),  Expect = 0.0
 Identities = 768/823 (93%), Gaps = 24/823 (3%)
 Strand=Plus/Plus

Query  556   AAACGTTTCCGTTTACAGGTACGAAATCTACGACTTGCGCTCTAATTCATGGAGGGTTCT  615
             |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  2393  AAACGTTTCCGTTTCCAGGTACGAAATCTACGACCTGCGCTCTAATTCATGGAGGGTTCT  2452

Query  616   CGAGGTCACTCCCAACGGGGAAATGGACCCTAATCATCCCCTCTACGGCGTTTCTGTGAA  675
             |||||||||||||| |||||||||||||||||||||       | | ||    |  |   
Sbjct  2453  CGAGGTCACTCCCACCGGGGAAATGGACCCTAATCA-------T-C-GC----C--T---  2494

Query  676   GGGAAATACCTACTTTTTTGCGCATGAGGATAG-CAGCAGTGGTGAAATTGATGAAGATG  734
                |||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||
Sbjct  2495  --CAAATACCTACTTTTTTGCGCATGAGGATAGTCA-CAGTGTTGAAACTGATGAAGATG  2551

Query  735   GCGACATAATCGATCTTGAAGATTTCTTACTCTGTTTTGATTTTACAACAGAGACATTTG  794
             |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2552  GCGAGATAACCGATCTTGAAGATTTCTTACTCTGTTTTGATTTTACAACAGAGACATTTG  2611

Query  795   GTCTGCGTCTGCCTCTTCCGTTTCACTCTACTATCGATGCGACTGTGACCCTCTCTTGTG  854
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||
Sbjct  2612  GTCTGCGTCTGCCTCTTCCGTTTCACTCTACTATCGACGCGACTGTGACCCTCTCTAATG  2671

Query  855   TTAGAGACCAGCAGCTCGCGGTGCTATATCATAATGAGGGTCTTCACAGTGATGATCGGT  914
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2672  TTAGAGACCAGCAGCTCGCGGTGCTATATCATAATGAGGGTCTTCACAGTGATGATCGGT  2731

Query  915   TTACCACAGTTGAGTTTTGGGTTACTACTAGTATTGAGCCCAACTCTGTGTCCTGGAGCA  974
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2732  TTACCACAGTTGAGTTTTGGGTTACTACTAGTATTGAGCCCAACTCTGTGTCCTGGAGCA  2791

Query  975   AGTTTTTGACAGTGGATATGAGACCATTGGCACTCACTGGTGTTCGGTTTGACAATGATA  1034
             ||||||| | |||||||||||||||| | |||||| ||||||||| |||||||||| |||
Sbjct  2792  AGTTTTTAATAGTGGATATGAGACCAATCGCACTCGCTGGTGTTCTGTTTGACAATTATA  2851

Query  1035  TGGGTGCCACCTTCTTCATTGACGAGGATGAGAAAGTCGCTGTGGTTTTCGATCTAGACG  1094
             |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct  2852  TGGGTGCCACCTTCTTCATTGACGAGGAAGAGAAAGTCGCTGCGGTTTTCGATCTAGACG  2911

Query  1095  GATACCTAAGCACCGAGAGCGCTCGTTACCACACCGCTTTTATCAGTGGAAAGGATGGAT  1154
             |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  2912  GATACCTACGCACCGAGAGCGCTCGTTACCACACAGCTTTTATCAGTGGAAAGGATGGAT  2971

Query  1155  TCTTTAAACCTGTGACTCTAGGAGTAGCTCCCAATGTCGGGGAACCTTGTCCCAGAACCG  1214
             ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct  2972  TCTTTAAACCTGTGACTCTTGGAGTAGCTCCCAATGTCGGGAAACCTTGTCCCAGAACCG  3031

Query  1215  GGCATATTCCGACTACATATCGTCCCCCGCTTGTCTGCTCGTCTACTTACCTTCCGAGTT  1274
             |||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||
Sbjct  3032  GGCATATTCCGACTACATATCGTCCCCCGCTTGTCTGCTCTTCTTCTTATCTTCCGAGTT  3091

Query  1275  TAGTGCAAGTCAACCAACAGCGCAAAAGGAAAGAAAGACATGTTTAGTTTTCTGTTCCTT  1334
             |||||||||||||||||| ||||||||||||||||||| |||||||||||| | ||| ||
Sbjct  3092  TAGTGCAAGTCAACCAACCGCGCAAAAGGAAAGAAAGAGATGTTTAGTTTTGT-TTC-TT  3149

Query  1335  GCAGTTCTCAAGACTGCTAGTCAATTCTCAGTTACATTTCCAT  1377
             ||||||||||||||||||||||||||||||||| |||||||||
Sbjct  3150  GCAGTTCTCAAGACTGCTAGTCAATTCTCAGTTTCATTTCCAT  3192


 Score =  390 bits (211),  Expect = 1e-107
 Identities = 235/246 (96%), Gaps = 3/246 (1%)
 Strand=Plus/Plus

Query  276   GATTCCATCTCCGTCGCAGCAAGGAGGAAGAAGAAGACACGATGGATCTATCTATAAAGC  335
             ||||||||||| | |||| ||||||  |||  ||||||  ||| ||||||||||||||||
Sbjct  2150  GATTCCATCTCTGCCGCAACAAGGA-CAAG--GAAGACTTGATTGATCTATCTATAAAGC  2206

Query  336   AGGTAGATTTGCTTAATCAAGTCGAGATATCTAGAGTGTATCACTGCGACGGCTTGTTGT  395
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  2207  AGGTAGATTTGCTTAATCAAGTCGAGATATCTAAAGTGTATCACTGCGACGGCTTGTTGT  2266

Query  396   TATGCGTGGCTAAGGACAACTCGAGGGTCGTGGTTTGGAACCCTTATTTGGGGCAAACAA  455
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2267  TATGCGTGGCTAAGGACAACTCGAGGGTCGTGGTTTGGAACCCTTATTTGGGGCAAACAA  2326

Query  456   GATGGATCAGACCCAGAACAGAATCCAACATAGGAGACAGCTATGCTCTTGGATACGACA  515
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2327  GATGGATCAGACCCAGAACAGAATCCAACATAGGAGACAGCTATGCTCTTGGATACGACA  2386

Query  516   TCAACC  521
             ||||||
Sbjct  2387  TCAACC  2392


 Score =  200 bits (108),  Expect = 2e-50
 Identities = 125/133 (94%), Gaps = 2/133 (2%)
 Strand=Plus/Plus

Query  84    GAACGAGTATGTGCGATCTTCCACCGAAGCTGGTAGGGGAGAAGATCCTCACGAGGATTC  143
             |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct  2019  GAACGAGTATGTGCGATCTTCCACCGAAGCTGGTAGGGGAGAAGATCCTCACCAAGATTC  2078

Query  144   CGATAACATCTCTGAGAGCGGTGCGATCCACTTGCAAATTATGGAACG-CTTTAACCAAA  202
             | ||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||
Sbjct  2079  CCATAACATCTCTGAGAGCGGTGAGATCCACTTGCAAATTATGGAA-GACTTTAACCAAA  2137

Query  203   GATCGGGTTCTGG  215
             ||| ||||| |||
Sbjct  2138  GATTGGGTTTTGG  2150


> Ahg912493 jgi|Araly1|912493|Al_scaffold_0001_2747
Length=1245

 Score = 1171 bits (634),  Expect = 0.0
 Identities = 1069/1270 (84%), Gaps = 65/1270 (5%)
 Strand=Plus/Plus

Query  92    ATGTGCGATCTTCCACCGAAGCTGGTAGGGGAGAAGATCCTCACGAGGATTCCGATAACA  151
             |||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||
Sbjct  1     ATGTGCGATCTTCCACCGAAGCTGGTAGGGGAGAAGATCCTCACCAAGATTCCTATAACA  60

Query  152   TCTCTGAGAGCGGTGCGATCCACTTGCAAATTATGGAACG-CTTTAACCAAAG-ATCGGG  209
             ||||||||||||||| |||||||||||||||||||||| | |||||||||||| ||  | 
Sbjct  61    TCTCTGAGAGCGGTGAGATCCACTTGCAAATTATGGAA-GACTTTAACCAAAGAAT-TGA  118

Query  210   TTCTGGGT-AA-----AGCAGC--GGC-GCAGTTTTTGGGGTTTATGACGATGGATTCAA  260
             || ||||| ||     ||| ||  ||| ||||||||| ||||| ||||||||||||||||
Sbjct  119   TTTTGGGTGAAGCGTCAGCGGCAAGGCAGCAGTTTTTAGGGTTCATGACGATGGATTCAA  178

Query  261   AGGTCTGTTCAGTTAGATTCCATCTCCGTCGCAGCAAGG---AGG--AA-GAAGAAGACA  314
             |||| |||||| ||||||||| |||||| ||||||||||   |||  || ||| ||||| 
Sbjct  179   AGGTTTGTTCAATTAGATTCCTTCTCCGCCGCAGCAAGGACAAGGAAAACGAAAAAGACT  238

Query  315   CGATGGATCTATCTATAAAGCAGGTAGATTTGCTTAATCAAGTCGAGATATCTAGAGTGT  374
              | | ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
Sbjct  239   TGGTTGATCTATCTATAAAGCAAGTAGATTTGCTTAATCAAGTCGAGATATCTAAAGTCT  298

Query  375   ATCACTGCGACGGCTTGTTGTTATGCGTGGCTAAGGACAACTCGAGGGTCGTGGTTTGGA  434
              ||| ||| ||||||| ||||||||||| | ||||||| |||| ||| ||||||||||||
Sbjct  299   TTCATTGCAACGGCTTATTGTTATGCGTCGTTAAGGACCACTCTAGGCTCGTGGTTTGGA  358

Query  435   ACCCTTATTTGGGGCAAAC-AAGATGGATCAGACCCAGAACAGAATCCAACATAGGAGAC  493
             ||||||||||||||||||| ||| ||| ||||||| |||||||| | |||||||  ||||
Sbjct  359   ACCCTTATTTGGGGCAAACAAAG-TGGGTCAGACCAAGAACAGATTTCAACATACTAGAC  417

Query  494   AGCTATGCTCTTGGATACGAC---ATCAACCGTAACCACAAAATCTTGAGGATGGTGCAG  550
             || |||||||| ||||| |||   |||||| || ||||||||||||||||| | |||  |
Sbjct  418   AGGTATGCTCTCGGATATGACAAGATCAACTGTCACCACAAAATCTTGAGGTTTGTG--G  475

Query  551   ACAAGA-AACGTTTC-CGTTTACAGGTACGAAATCTACGACTTGCGCTCTAATTCATGGA  608
                ||| |||   || ||||  ||||||||||||||| |||||  |||||||||||||||
Sbjct  476   ---AGATAAC---TCGCGTTCCCAGGTACGAAATCTATGACTTTAGCTCTAATTCATGGA  529

Query  609   GGGTTCTCGAGGTCACTCCCAACGGGGAAATGGA-CCCTAATCA-TC--C--CCTC-TAC  661
             |||||||||| ||||||| | || |||| || || || |   || ||  |  |  |  | 
Sbjct  530   GGGTTCTCGAAGTCACTCGCGACTGGGAGATAGATCCTTGGGCACTCGGCGGCGGCGGA-  588

Query  662   GGCGTTTCTGTGAAGGGAAATACCTACTTTTTTGCGCATGAGGATAGCAGCAGTG---GT  718
             ||||| |||||||||||||||  ||||||||||||   ||| || | | | | ||    |
Sbjct  589   GGCGTGTCTGTGAAGGGAAATTGCTACTTTTTTGCTTGTGA-GA-A-C-GTATTGAATCT  644

Query  719   -GAAATTGATGAAGATGGCGACATAATC-GATCTTGAAGATTTCTTACTCTGTTTTGATT  776
              |||  ||||||| |||| ||  ||| | |||   |||||||||||||| ||||||||||
Sbjct  645   AGAAGCTGATGAAAATGGAGAGGTAA-CAGATAGGGAAGATTTCTTACTTTGTTTTGATT  703

Query  777   TTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCGTTTCACTCTACTATCGATGCGA  836
             | ||| ||||||| ||||||| ||| || ||||||||||||||||||  |||||| | | 
Sbjct  704   TCACATCAGAGACGTTTGGTCGGCGCCTTCCTCTTCCGTTTCACTCTTGTATCGACGAGG  763

Query  837   CTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCGGTGCTATATCATAATGAGGGTC  896
             |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct  764   CTGTGACCCTCTCTTGTGTTAGAGACGAGCAGCTCGCGGTGCTATATCAAAATGAGGGTC  823

Query  897   TTCACAGTGATGATCGGTTTACCACAGTTGAGTTTTGGGTTACTACTAGTATTGAGCCCA  956
             ||   ||||| |||||||||| ||||||||||||||||||||| ||| | || |||||||
Sbjct  824   TT---AGTGAAGATCGGTTTAGCACAGTTGAGTTTTGGGTTACAACTGGGATCGAGCCCA  880

Query  957   ACTCTGTGTCCTGGAGCAAGTTTTTGACAGTGGATATGAGACCATTGGCACTCACTGGTG  1016
             ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||
Sbjct  881   ACTCTGTGTCCTGGAGCAAGTTTTTGACAGTGGATATGAGACCATTCACACTCAGTGGTG  940

Query  1017  TTCGGTTTGACAA-TGATATGGGTGCCACCTTCTTCATTGACGAGGATGAGAAAGTCGCT  1075
             |||| |||||||| || ||||| ||| |  ||||||||||||||||| ||||||||||||
Sbjct  941   TTCGCTTTGACAAATG-TATGGCTGCGAGTTTCTTCATTGACGAGGAAGAGAAAGTCGCT  999

Query  1076  GTGGTTTTCGATCTAGACGGATACCTAAGCACC-GAGAGCGCTCGTTACCACACCGCTTT  1134
             ||||| |||||||||||||||||||||  || | |||| |||||||| |||||| |||||
Sbjct  1000  GTGGTGTTCGATCTAGACGGATACCTAC-CAACTGAGACCGCTCGTTGCCACACGGCTTT  1058

Query  1135  TATCAGTGGA-AAGGATGGATTCTTTAAACCTGTGACTCTAGGAGTAGCTCCCAATGTCG  1193
             |||||||||| ||| | |||| |||||||||| ||| ||| |||||||||||| ||||||
Sbjct  1059  TATCAGTGGACAAG-ACGGATACTTTAAACCTCTGAGTCTTGGAGTAGCTCCCGATGTCG  1117

Query  1194  GGGAACCTTGTCCCAGAACCGGGCATATTCCGACTACATATCGTCCCCCGCTTGTCTGCT  1253
             ||||||||||||||| |||||||| ||| | ||||| |||| ||||||||||||| ||||
Sbjct  1118  GGGAACCTTGTCCCATAACCGGGCGTATGCTGACTAGATATTGTCCCCCGCTTGTGTGCT  1177

Query  1254  CGTCTACTTACCT-TCCGAGTTTAGTGCAAG-TCAACCAACAGCGCAAAAGGAAAGAAAG  1311
             | ||| ||||  | ||| ||||| ||||| | |||| |||| ||||||||||||||||||
Sbjct  1178  CTTCTGCTTAT-TATCCAAGTTTGGTGCA-GCTCAAACAACCGCGCAAAAGGAAAGAAAG  1235

Query  1312  ACATGTTTAG  1321
             | ||||||||
Sbjct  1236  AGATGTTTAG  1245


> Ahg921649 jgi|Araly1|921649|scaffold_102930.1
Length=1243

 Score =  363 bits (196),  Expect = 3e-99
 Identities = 502/639 (79%), Gaps = 63/639 (10%)
 Strand=Plus/Plus

Query  95   TGCGATCTTCCACC-GAAGCTGGTAGGGGAGAAGATCCTCACGAGGATTCCGATAACATC  153
            |||||||||||||| |||  ||||| |||| || ||  |||| | |||||||||||||||
Sbjct  33   TGCGATCTTCCACCGGAA-TTGGTA-GGGA-AA-ATATTCACCAAGATTCCGATAACATC  88

Query  154  TCTGAGAGCGGTGCGATCCACTTGCAAATTATGGAACGCTTTAACCAAAGA-TCGGGTTC  212
            ||||||| | || |||||||||||||||||||||||||||||||||||||| | ||||| 
Sbjct  89   TCTGAGAACAGTTCGATCCACTTGCAAATTATGGAACGCTTTAACCAAAGAAT-GGGTTT  147

Query  213  TGGGTAAAGCAGCGGC--G-CAGTTTT-TG-GGGTTT-ATGACGATGG-ATTCAAAGGTC  265
            |||| ||||||| |||  | |||   | || ||| || ||||| | || |||| | ||| 
Sbjct  148  TGGGCAAAGCAGTGGCAAGGCAGCCGTGTGCGGGGTTCATGACTA-GGTATTCTAGGGTT  206

Query  266  T-GTTCAGTTAGATTCCATCTCC--G---TCGCAGCAAGGAG-GAAGAAGAAGACACGAT  318
            | || |||| |||||  ||||||  |   || | ||||  |  || |  || | |  | |
Sbjct  207  TTGT-CAGTAAGATTTGATCTCCAAGGAATC-C-GCAAA-ACCGATGGCGA-G-CTGG-T  259

Query  319  GGATCTATCTATAAAGCAGGTAGATTTGCTTAATCAAGTCGAGATA-TCTAGAGTGTATC  377
            ||||| ||||| ||||||| ||||| |  ||||||||||||||||| | || ||| | ||
Sbjct  260  GGATCCATCTAGAAAGCAGTTAGATGTATTTAATCAAGTCGAGATAAT-TAAAGTCTTTC  318

Query  378  ACTGCGACGGCTTGTTGTTATGCGTGGCT-AAGGACAACTCGAGGGTCGTGGTTTGGAAC  436
            ||||| ||||||| ||||||||| |  || |||||||| |||||| ||||||| ||||||
Sbjct  319  ACTGCCACGGCTTATTGTTATGCATC-CTCAAGGACAAGTCGAGGCTCGTGGTGTGGAAC  377

Query  437  CCTTATTTGGGGCAAACAAG-ATGGATCAGACCCAGAACAGAATC-CAACATAGGA-GAC  493
            |||||||||||||||||||| | |||| ||||| |||||||| |  || || |  | |||
Sbjct  378  CCTTATTTGGGGCAAACAAGGA-GGATTAGACCGAGAACAGATTTTCA-CAGAC-ACGAC  434

Query  494  AGCTATGCTCTTGGATACGACATCAACCGTAACCACAAAATCTTGAGGAT---GG-TGCA  549
            || |||||||| |||||||||||||| | ||||||||||||||||||| |   || || |
Sbjct  435  AGATATGCTCTCGGATACGACATCAATCATAACCACAAAATCTTGAGGTTTTTGGATG-A  493

Query  550  -GAC-A-AGAAACGTTTCCGTTTACAGGTACGAAATCTACGACTTGCGCTCTAATTCATG  606
             ||| | | |||| || |  || |  | |||||||||||||||||| ||||||| |||||
Sbjct  494  TGACCATAAAAACCTT-C--TTGA--G-TACGAAATCTACGACTTGAGCTCTAAGTCATG  547

Query  607  GAGGGTTCTCGAGGTCACTCCCAACGGGGAAATGGACCCTAATCA-TCCCCTCTACGGCG  665
            |||||||||| || |||||||| || || |  || |   |  ||| || || |   ||||
Sbjct  548  GAGGGTTCTCAAGATCACTCCCGACTGGTA--TGTAAATT--TCAATCACCGC---GGCG  600

Query  666  TTTCTGTGAAGGGAAATACCTACTTTTTTGCG-CATGAG  703
            | |||||||| ||||||||||||||||||| | ||||||
Sbjct  601  TGTCTGTGAATGGAAATACCTACTTTTTTG-GTCATGAG  638


> Ahg479142 jgi|Araly1|479142|fgenesh2_kg.3__1843__AT3G16740.1
Length=1369

 Score =  104 bits (56),  Expect = 2e-21
 Identities = 106/131 (81%), Gaps = 0/131 (0%)
 Strand=Plus/Plus

Query  755  GATTTCTTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCG  814
            ||||||||||||||||||||||||||||  ||||  ||||| | |||||||||||| || 
Sbjct  780  GATTTCTTACTCTGTTTTGATTTTACAAGGGAGAGGTTTGGACCGCGTCTGCCTCTGCCT  839

Query  815  TTTCACTCTACTATCGATGCGACTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG  874
            |||||||||  | | || |  |||||||| || ||| ||||||||||  |||| || || 
Sbjct  840  TTTCACTCTTTTGTTGAAGATACTGTGACTCTATCTAGTGTTAGAGATAAGCAACTTGCA  899

Query  875  GTGCTATATCA  885
            ||| ||| |||
Sbjct  900  GTGTTATTTCA  910


> Ahg485308 jgi|Araly1|485308|fgenesh2_kg.5__1300__AT3G49510.1
Length=2011

 Score = 82.4 bits (44),  Expect = 9e-15
 Identities = 101/128 (79%), Gaps = 6/128 (5%)
 Strand=Plus/Plus

Query  761  TTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCGTTTCAC  820
            |||||||||||||||||||||||||||| |||||| |  ||| ||||||| | |||||||
Sbjct  713  TTACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCACGTTTGCCTCTGCTGTTTCAC  772

Query  821  TCTAC-TATCG-A-TGC-GA--CTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG  874
             || | | ||  | |   ||  ||||||| || ||||| ||||||||  || ||||||| 
Sbjct  773  CCTCCATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCT  832

Query  875  GTGCTATA  882
            ||| ||||
Sbjct  833  GTGTTATA  840



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 57135367500


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5