BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G25490.1
Length=2110
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472822 jgi|Araly1|472822|fgenesh2_kg.1__2776__AT1G25490.1 3430 0.0
Ahg920212 jgi|Araly1|920212|scaffold_101493.1 1147 0.0
> Ahg472822 jgi|Araly1|472822|fgenesh2_kg.1__2776__AT1G25490.1
Length=2108
Score = 3430 bits (1857), Expect = 0.0
Identities = 2029/2112 (96%), Gaps = 11/2112 (1%)
Strand=Plus/Plus
Query 6 aaaaaTCAAACGCAGAATATTATTTTTCTCGCTCGCGAATTCCTCTTTCTCACCTTTTCT 65
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1 AAAAATCAAACGGAGAATATTATTTTTCTCGCTCGC-AATTCCTCTTTCTCACCTTTTCT 59
Query 66 CGCTCC-TGGGAATCT---GAAGCAGTTCTTCTCCGACGCCTGGATCGTGATTTGATTCG 121
||| || | ||||||| ||||||| |||||| ||||||||||||||||| ||||||||
Sbjct 60 CGC-CCATCGGAATCTGAAGAAGCAGCTCTTCTACGACGCCTGGATCGTGACTTGATTCG 118
Query 122 AACTTTCACATAAGATGGCTATGGTAGATGAACCGTTGTATCCCATTGCTGTGCTTATAG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 119 AACTTTCACATAAGATGGCTATGGTAGATGAACCGTTGTATCCCATTGCTGTGCTCATAG 178
Query 182 ATGAGCTTAAGAATGATGATATTCAGCTTCGTTTGAACTCGATCCGTCGCTTATCTACTA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 ATGAGCTTAAGAATGATGATATTCAGCTTCGTTTGAACTCGATCCGTCGCTTATCTACTA 238
Query 242 TAGCTCGTGCTCTTGGAGAGGAGCGTACAAGGAAGGAGTTAATCCCTTTTTTGAGTGAGA 301
|||||||||| ||||| ||||| || ||||||||||| ||||||||||||||||||||||
Sbjct 239 TAGCTCGTGCCCTTGGTGAGGAACGCACAAGGAAGGAATTAATCCCTTTTTTGAGTGAGA 298
Query 302 ATAGTGACGATGACGATGAGGTGCTTCTTGCAATGGCTGAGGAGTTAGGAGTTTTTATTC 361
||||||| |||||||| |||||||| ||||||||||||||||| || |||||||||||||
Sbjct 299 ATAGTGATGATGACGACGAGGTGCTGCTTGCAATGGCTGAGGAATTGGGAGTTTTTATTC 358
Query 362 CGTTTGTTGGAGGAATTGAGTTTGCGCATGTTCTTCTTCCTCCTTTGGAATCTCTATGTA 421
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 359 CGTTTGTCGGAGGAATTGAGTATGCGCATGTTCTTCTTCCTCCTTTGGAATCTCTCTGTA 418
Query 422 CTGTTGAAGAGACTTGTGTGAGAGAAAAAGCTGTGGAATCGCTTTGTAAGATTGGATCTC 481
||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 419 CTGTTGAAGAGACCTGTGTGAGAGAAAAAGCTGTGGAGTCGCTTTGTAAGATCGGATCTC 478
Query 482 AGATGAAAGAGAATGATCTTGTTGAATCTTTTGTTCCTCTTGTGAAGAGGTTAGCGGGTG 541
| |||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||
Sbjct 479 AAATGAAAGAGAATGATCTTGTTGAATCCTTTGTCCCTCTTGTGAAGAGACTAGCAGCTG 538
Query 542 GTGAATGGTTTGCAGCAAGAGTTTCTGCATGTGGTATATTTCATGTTGCATACCAAGGTT 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 GTGAATGGTTTGCAGCAAGAGTTTCTGCATGTGGTATATTTCATGTTGCATACCAAGGTT 598
Query 602 GCACTGATGTGTTGAAGACTGAGTTACGGGCTACTTATAGCCAGTTGTGCAAAGATGATA 661
||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 599 GCACTGATGTGCTGAAGACAGAGTTACGGGCTACTTATAGCCAGTTGTGCCAAGATGATA 658
Query 662 TGCCAATGGTGCGAAGAGCTGCTGCATCTAACCTGGGGAAATTTGCTACAACTGTCGAGT 721
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 TGCCTATGGTGCGAAGAGCTGCTGCATCTAACCTGGGGAAATTTGCTACAACTGTCGAGT 718
Query 722 CTACCTTTTTGATTGCTGAGATCATGACTATGTTCGATGATCTTACTAAAGATGACCAAG 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 CTACCTTTTTGATTGCTGAGATCATGACTATGTTCGATGATCTTACTAAAGATGACCAAG 778
Query 782 ATTCTGTGAGACTATTGGCTGTTGAAGGGTGTGCAGCTCTTGGAAAGTTGTTGGAACCTC 841
||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 779 ATTCTGTGAGACTTTTGGCTGTGGAAGGGTGTGCAGCTCTTGGAAAGTTGCTGGAACCTC 838
Query 842 AGGATTGTGTTGCACGCATTTTACCTGTTATTGTTAATTTCTCTCAGGATAAATCTTGGA 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 AGGATTGTGTTGCACGCATTTTACCTGTTATTGTTAATTTCTCTCAGGATAAATCTTGGA 898
Query 902 GGGTGCGCTACATGGTTGCTAATCAGCTATATGAACTTTGTGAGGCAGTGGGTCCTGATT 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GGGTGCGCTACATGGTTGCTAATCAGCTATATGAACTTTGTGAGGCAGTGGGTCCTGATT 958
Query 962 GCACGAGGACGGATTTGGTTCCAGCATATGTGAGATTGCTAAGGGACAATGAGGCTGAAG 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GCACGAGGACGGATTTGGTTCCAGCATATGTGAGATTGCTAAGGGACAATGAGGCTGAAG 1018
Query 1022 TGCGAATAGCAGCAGCGGGAAAAGTGACCAAGTTCTGTCGGCTTTTGAATCCAGAGCTTG 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 TGCGAATAGCAGCAGCGGGAAAAGTGACCAAGTTCTGTCGGCTTTTGAATCCAGAGCTTG 1078
Query 1082 CGATTCAGCACATCCTTCCTTGTGTGAAGGAATTATCATCGGATTCTTCTCAACATGTCC 1141
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1079 CGATTCAGCACATCCTTCCTTGTGTGAAGGAATTATCATCTGATTCTTCTCAACATGTCC 1138
Query 1142 GCTCTGCTCTAGCTTCAGTAATAATGGGGATGGCTCCTATCCTTGGGAAGGACTCAACCA 1201
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1139 GCTCTGCTCTAGCTTCAGTAATAATGGGAATGGCTCCTATCCTTGGGAAGGACTCAACCA 1198
Query 1202 TTGAGCATCTGTTACCAATTTTTCTTTCCCTTTTGAAAGATGAATTTCCTGATGTGCGCC 1261
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1199 TTGAGCATCTGTTACCAATTTTTCTTTCCCTTCTGAAAGATGAATTTCCTGATGTGCGCC 1258
Query 1262 TTAACATCATAAGCAAGTTAGATCAAGTCAACCAGGTTATTGGAATTGATCTACTATCTC 1321
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1259 TCAACATCATAAGCAAGCTAGATCAAGTCAACCAGGTTATTGGAATTGATCTACTGTCTC 1318
Query 1322 AATCCTTGTTACCGGCCATTGTAGAACTTGCTGAGGATCGGCACTGGAGAGTCCGACTTG 1381
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1319 AATCCTTGTTACCGGCCATTGTAGAGCTTGCTGAGGATCGGCACTGGAGAGTCCGACTTG 1378
Query 1382 CAATAATAGAGTATGTTCCACTGTTGGCCAGCCAGTTAGGTATAGGATTTTTCGATGACA 1441
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 CGATAATAGAGTATGTTCCTCTGTTGGCCAGCCAGTTAGGTATAGGATTTTTCGATGACA 1438
Query 1442 AGCTCGGAGCCCTTTGCATGCAATGGCTGCAAGACAAGGTCTACTCTATCCGCGAAGCTG 1501
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1439 AGCTTGGAGCCCTTTGCATGCAATGGCTGCAAGACAAGGTCTACTCTATCCGTGAAGCTG 1498
Query 1502 CAGCAAACAACCTAAAGCGCCTCGCAGAGGAGTTTGGTCCTGAATGGGCAATGCAGCACT 1561
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1499 CAGCAAACAACCTAAAGCGCCTTGCAGAGGAGTTTGGTCCTGAATGGGCAATGCAGCACT 1558
Query 1562 TAGTTCCCCAGGTATTGGACATGGTCAACAATCCGCACTACCTACACAGGATGATGGTTC 1621
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1559 TAGTTCCCCAGGTATTGGACATGGTCAACAATCCACACTACCTACATAGGATGATGGTTC 1618
Query 1622 TACGCGCAATATCTCTCATGGCGCCTGTAATGGGATCAGAAATCACATGCTCTAAGTTTC 1681
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1619 TACGTGCAATATCTCTCATGGCTCCTGTAATGGGATCAGAAATCACATGCTCTAAGTTTC 1678
Query 1682 TTCCTGTGGTTGTTGAAGCATCAAAAGACAGAGTTCCAAACATCAAGTTCAACGTTGCCA 1741
|||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct 1679 TTCCTGTGGTCGTTGAAGCATCGAAAGACAGAGTTCCAAACATCAAGTTCAATGTTGCAA 1738
Query 1742 AACTTCTGCAATCCCTCATCCCCATAGTCGACCAATCAGTGGTGGACAAAACAATCCGTC 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 AACTTCTGCAATCCCTCATCCCCATAGTCGACCAATCAGTGGTGGACAAAACAATCCGTC 1798
Query 1802 AGTGTTTGGTGGACCTGAGCGAAGACCCTGATGTTGATGTTCGTTATTTTGCAAATCAAG 1861
|||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1799 AGTGTTTGGTAGACCTTAGCGAAGACCCTGATGTTGATGTTCGCTATTTTGCAAACCAAG 1858
Query 1862 CACTTAATTCCATCGATGGTTCCACAGCAGCACAATCCTGAATTGtttttttttCATATG 1921
| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||
Sbjct 1859 CGCTTAATTCCATCGATGGTACCACAGCAGCACAATCCTGAATTGATTTTATTTCATATG 1918
Query 1922 TATGATCGTTAAGTTAAGTTTCTATTATTCGTGTTCT--CTGCAATTTATTTGGTTTGTT 1979
||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||||||
Sbjct 1919 TATGATCGTTAAGTTAAGTTTCT-T-ATTCGTGTTCTTTCTGCAGTTTATTTGGTTTGTT 1976
Query 1980 T-GTGTAAAACGCCATTTTGGTTGCTGGCTATGAACTGCAACTATTTTTGTTAGTAAAAT 2038
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1977 TCGTGTAAAACGCCATTTTGGTTGCTGGCTATGAACTGCAACTATATTTGTTAGTAAAAT 2036
Query 2039 TGTATTACCTTTTTTACACTTTCTGTTGTTCCAAACCTTATACATTCTTCTTAGTTTACT 2098
|||||| ||||| ||||| ||||| ||||||||| | |||||||||||||||||||||||
Sbjct 2037 TGTATTCCCTTTCTTACATTTTCTATTGTTCCAAGCTTTATACATTCTTCTTAGTTTACT 2096
Query 2099 AATGCTAACACT 2110
||||||||||||
Sbjct 2097 AATGCTAACACT 2108
> Ahg920212 jgi|Araly1|920212|scaffold_101493.1
Length=1804
Score = 1147 bits (621), Expect = 0.0
Identities = 1410/1779 (79%), Gaps = 102/1779 (6%)
Strand=Plus/Plus
Query 135 GATGGCTATGGTAGATGAACCGTTGTAT-CCC-ATTGCTGTGCTTATAGATGAGCTTAAG 192
|||| ||||||| ||||| || || ||| ||| ||||| |||||||| || ||||| ||
Sbjct 20 GATGTCTATGGTTGATGAGCC-TT-TATACCCGATTGCCGTGCTTATCGACGAGCTAAAA 77
Query 193 AATGATGATATTCAGCTTCGTTTGAACTCGATCCGTC-GCTTATCTACT-ATAGCTCGTG 250
|| ||||||||||||||| | |||||||| || | | |||| |||| | || |||||||
Sbjct 78 AACGATGATATTCAGCTTAGATTGAACTCTATTAGACGGCTT-TCTA-TCATTGCTCGTG 135
Query 251 CTCTTGGAGAGGAGCGTACAAGGAAGGAGTT-AATCCCTTTTTTGAGTGAGAATAGTGAC 309
|||||||||||||| | |||||||| ||||| | ||| ||| || |||||||| | ||||
Sbjct 136 CTCTTGGAGAGGAGAGGACAAGGAAAGAGTTGATTCCGTTTCTT-AGTGAGAACAATGAC 194
Query 310 GATGACGATGAGGTGCTTCTT-GCAATGGCTGAGGAGTTAGGAGTTTTTATTCCGTTTGT 368
||||| |||||||||||| || || ||||| || ||||| || ||||||||||||| |||
Sbjct 195 GATGATGATGAGGTGCTT-TTGGCTATGGCGGAAGAGTTGGGGGTTTTTATTCCGTATGT 253
Query 369 TGGAGGAATTGAGTTTGCGCATGTTCTT-CTTCCTCCTTTGGA-ATCTCTATG-TACTGT 425
||||| |||||| ||| |||||| || ||||| |||||||| | |||| | | |||
Sbjct 254 AGGAGGGGTTGAGTATGCACATGTT-TTGCTTCCACCTTTGGAGA-CTCT-CGCGAGTGT 310
Query 426 TGAAGAGACTTGTGTGAGAGAAAAAGCTGTGGAATCGCTTTGTAAG-ATTGGAT-CTCAG 483
||| || ||||| ||||| ||||||||||| || || ||||| || ||||| | |||||
Sbjct 311 TGAGGAAACTTGCGTGAGGGAAAAAGCTGTAGATTCACTTTG-CAGAATTGG-TGCTCAG 368
Query 484 ATGAAAGAGAATGATCTT-GTTGAATC-TTTTGTTCCTCTTG-TGAAGAG-GTTAGCGGG 539
|||| |||||||| ||| |||| | | ||| |||||| | | ||| | || | |
Sbjct 369 ATGAGGGAGAATGA-CTTGGTTG-AGCATTTCACTCCTCTGGCT-AAGCGACTT-TCAGC 424
Query 540 TGGTGAATGGTTTGCAGCAAGAGTTTCTGCATGTGGTATATTT-CATGTTGCATA-CCAA 597
|||||||||||| |||| ||||| || |||||||| || ||| ||| ||||||| ||||
Sbjct 425 TGGTGAATGGTTCACAGCCAGAGTATCAGCATGTGGGAT-TTTCCATATTGCATACCCAA 483
Query 598 GGTTG-CACTGATGTGTTGAAGACTGAGTTACGGGCTACT-TATAGCCAG--TTGTGCAA 653
| || | | ||| | | ||||| ||| || | | | | ||| | ||| |||| | |
Sbjct 484 -G-TGCCCCAGATCCGCTAAAGACGGAGCTAAGATC-AATATATGGTCAGCTTTGT-C-A 538
Query 654 AGATGATATGCCAATGGTGCGAAGAGCTGCTGCATCTAACCTGGGGAAATTTGCTACAAC 713
|||||| |||||||||||||| |||||||| ||| | || ||||||| |||||| | ||
Sbjct 539 AGATGACATGCCAATGGTGCGCAGAGCTGCAGCAACCAATTTGGGGAAGTTTGCTGCTAC 598
Query 714 TGTCGAGTCTACCT-TTTTGATTG-CTGAGATCATGACTATGTTCGATGATCTTACTAAA 771
| || || | || ||||| | | || || ||| | ||||| || |||||||| ||
Sbjct 599 CATTGAATC-AGCTCATTTGA-AGACAGACATTATGTCCATGTTTGAGGATCTTACGCAA 656
Query 772 GATGACCAAGATTCTGTGAGACTATTGGCTGTTGAAGGG-TGTGCAGCTCTT-GGAAAGT 829
||||| |||||||| || ||| |||||||||||| |||| ||||| |||||| ||||| |
Sbjct 657 GATGATCAAGATTCGGTTAGATTATTGGCTGTTG-AGGGTTGTGCTGCTCTTGGGAAA-T 714
Query 830 TGTTGGAACCTCAGGATTGTGTTGCACGCATT-TTACCTGTTATTGTTAATTTCTCTCAG 888
||||||| || ||||| ||||| |||| |||| || ||||| ||||| | |||||| |||
Sbjct 715 TGTTGGAGCCCCAGGACTGTGTCGCACACATTCTT-CCTGTGATTGTGACTTTCTCGCAG 773
Query 889 GATAAATCTTGGAGGGTGCGCTACATGGTTGCTAATCAGCTATATGAACTTTGTGAGGCA 948
||||| || ||| | ||||| || |||||||| |||||||| |||||||||||||| ||
Sbjct 774 GATAAGTCCTGGCGTGTGCGTTATATGGTTGCAAATCAGCTCTATGAACTTTGTGAAGCT 833
Query 949 GTGGGTCCTGATTG-C-ACGAGGACGGATTTGGTTCCAGCATATG-TGAGAT-TGCTAAG 1004
|| || || || | | || ||||||||| |||| || ||||||| | | | | || |
Sbjct 834 GTAGGACCGGA--GCCAACTAGGACGGATCTGGTGCCTGCATATGCT-CG-TCTACTTCG 889
Query 1005 GGACAATGAGGCTGAAGTGCGAATAGCAGCAGCGGGAAAAGTGACCAAGTTCTGTCGGC- 1063
|| |||||||||||||| || |||||||| || |||||||| |||||||| |||| ||
Sbjct 890 TGATAATGAGGCTGAAGTTCGGATAGCAGCTGCTGGAAAAGTTACCAAGTTTTGTC-GCA 948
Query 1064 TTTTGAATCCAGAGCTTGCGATTCAGCACATCCTTCCTTGTGTGAAGGAATTATCATCGG 1123
|||| || || || || || || |||||||| ||||| ||||| |||||||||||||| |
Sbjct 949 TTTTAAACCCTGAACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGGAATTATCATCAG 1008
Query 1124 ATTCTTCTCAACATGTCCGCTCTGC-TCTAGCTTCAGTAATAATGGGGATGGCTCCTA-T 1181
| |||||||| || ||| | ||||| | | || ||||| |||||||| |||||||| | |
Sbjct 1009 ACTCTTCTCAGCACGTCAGATCTGCAT-TGGCATCAGTTATAATGGGAATGGCTCC-AGT 1066
Query 1182 CCTTGGG-AAGGACT-CAACCATTGAGCATC-TGTTACCAATTTTTCTTTCCCTTTTGAA 1238
|||||| ||||| | |||| |||||||||| | || ||||| |||||||| || |||||
Sbjct 1067 -CTTGGGTAAGGA-TGCAACAATTGAGCATCTTCTT-CCAATCTTTCTTTCTCTATTGAA 1123
Query 1239 AGATGAATTTCCTGATGTGCGCCTT-AACATCATAAGC-AAGTTAGATCAAGTCAACCAG 1296
||| |||||||||||||| || ||| ||||| || ||| || || || ||||| ||||||
Sbjct 1124 AGACGAATTTCCTGATGTACG-CTTAAACATTATCAGCAAACTT-GACCAAGTGAACCAG 1181
Query 1297 GTTATTGGAATTGATCTACTATCTCAATCCTTGTTACCGGCCATTGTAGAACTTGCTGAG 1356
|||||||| |||||||| ||||| ||||| || |||| ||||||||||||||||||||
Sbjct 1182 GTTATTGGGATTGATCTGCTATCGCAATCATTACTACCAGCCATTGTAGAACTTGCTGAA 1241
Query 1357 GATC-GGCACTGGAGAGTCCGACTTGCAATAATAGAGTATGTTCCAC-TGTTGGCCAGCC 1414
|| | ||||||||||||| || || || |||||||||||| |||| | |||||||||| |
Sbjct 1242 GA-CAGGCACTGGAGAGTACGTCTGGCTATAATAGAGTATATTCC-CTTGTTGGCCAGTC 1299
Query 1415 AGTTAGGTATAGGATT-TTTCGATGACAAGCTCGGAGCCCTTTGCATGCAATGGCTGCAA 1473
| |||||| |||| || ||| ||||| ||||| || || ||||||||||||||| | |||
Sbjct 1300 AATTAGGTGTAGGCTTCTTT-GATGATAAGCTTGGTGCTCTTTGCATGCAATGGTTACAA 1358
Query 1474 GACAAGG-TCTACTCTATCCGCGAAGCTGCAGCAAACAACCTAAAGCGCCTCGCAGAGGA 1532
||||||| || |||| ||||| |||||||| |||||||| || ||||| || || || ||
Sbjct 1359 GACAAGGTTC-ACTCAATCCGTGAAGCTGCTGCAAACAATCTTAAGCGTCTTGCTGAAGA 1417
Query 1533 GTTTGGTCCTGAATGGGCAATGCAGCACT-TAGTTCCCCAGGTAT-TGGACATGGTCAAC 1590
||||||||||||||||||||||||||| | ||||||| ||||| | | || ||| | |||
Sbjct 1418 GTTTGGTCCTGAATGGGCAATGCAGCA-TATAGTTCCTCAGGT-TCTAGAGATGATTAAC 1475
Query 1591 AATCCGCACTACCTACA-CAGGATGATGGTTCTACGCGCAATATCTCT-CATGGCGCCTG 1648
|| || ||||| ||| | | |||||| |||| || ||| |||| || | | || || |
Sbjct 1476 AACCCACACTATCTATATC-GGATGACAATTCTTCGTGCAGTATCGCTTC-TCGCTCCAG 1533
Query 1649 TAATGGGATCAGAAATCACATGCTCTAAGTTTCTT-CCTGTGGTTGTTGAA--GCATCAA 1705
|||||||||| || |||||||| || || | ||| |||| ||| | | || ||||| |
Sbjct 1534 TAATGGGATCCGAGATCACATGTTCCAAACT-CTTGCCTGCGGT-GAT-AACTGCATCTA 1590
Query 1706 AAGACAGAGTTCCAAACATCAAGTTCAACGTTGCCAAACTTCTGCAATCCCTCATCCCCA 1765
|||||||||||||||||||||| || || || |||||| | ||||||| ||||| || |
Sbjct 1591 AAGACAGAGTTCCAAACATCAAATTTAATGTGGCCAAAATGATGCAATCTCTCATTCCGA 1650
Query 1766 TAGTCGACCAATCAGTGGTGGACAAAACAATCCGTC-AGTGTTTGGTGGACCTGAGCGAA 1824
||||||||||| | || ||||| || | || || | | || |||||||| || || |||
Sbjct 1651 TAGTCGACCAAGCGGTTGTGGAGAACATGATACGGCCA-TGCTTGGTGGAGCTAAGTGAA 1709
Query 1825 GACCCTGATGTTGATGTTCGTTATTTT-GCAAATCAAGC 1862
||||| || ||||||||||||| |||| |||||||||||
Sbjct 1710 GACCCGGACGTTGATGTTCGTT-TTTTCGCAAATCAAGC 1747
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79380070580
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5