BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G26320.1
Length=1248
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472786 jgi|Araly1|472786|fgenesh2_kg.1__2740__AT1G26320.1 1720 0.0
Ahg903120 jgi|Araly1|903120|Al_scaffold_0003_248 850 0.0
Ahg941200 jgi|Araly1|941200|scaffold_601744.1 726 0.0
Ahg941198 jgi|Araly1|941198|scaffold_601742.1 726 0.0
Ahg941199 jgi|Araly1|941199|scaffold_601743.1 712 0.0
Ahg893609 jgi|Araly1|893609|Al_scaffold_0006_1605 621 4e-177
> Ahg472786 jgi|Araly1|472786|fgenesh2_kg.1__2740__AT1G26320.1
Length=1177
Score = 1720 bits (931), Expect = 0.0
Identities = 1100/1182 (93%), Gaps = 10/1182 (1%)
Strand=Plus/Plus
Query 30 GAAATGACGAACGCAGAAGCAGTAACGGTGACCAACAAGCAAATCATATTCCCAGACTAT 89
|||||| | ||| |||| |||| ||||||||||||||||| |||||||||| |||||||
Sbjct 1 GAAATGGCTAACACAGAGGCAGCGACGGTGACCAACAAGCAGATCATATTCCGAGACTAT 60
Query 90 GTTACTGGATTTCCAAAAGAATCTGATCTTAAAATAACCACAACTACCATTGATCTAAGG 149
|| | |||||| |||| ||||||||||||||| |||||||||||||||| |||||||||
Sbjct 61 GTGAGTGGATTCCCAAGAGAATCTGATCTTAACCTAACCACAACTACCATCGATCTAAGG 120
Query 150 CTTCCGGAGGGATCCACCTCAGTACTGGTGAAGAATCTTTACTTGTCTTGCGATCCTTAC 209
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 121 CTTCCGGAGGGATCCACGTCAGTGCTGGTGAAGAATCTTTACTTGTCTTGCGATCCTTAC 180
Query 210 ATGCGCATTTGCATGGGAAAGCCCGATCCCTTGTCTTCTTCCCTTGTTCCACCTTACAAG 269
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 181 ATGCGCATTTGCATGGGAAAGCCCGATCCCTTGTCTTCTTCCCTTGTTCCACCGTACAAG 240
Query 270 ACCGGCGTGCCAATCATTGGGCTTGGAGTGTCTAAAGTGATTGATTCAGGACATCCAGAT 329
|| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 241 ACTGGCGTGCCAATCATTGGGCTTGGAGTGTCTAAAGTGATAGATTCAGGGCATCCAGAT 300
Query 330 TACAAAAAGGGAGACTTACTTTGGGGACTAGTTGGATGGGAGGAGTACAGTGTTATTACT 389
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 301 TACAAAAAGGGAGACTTACTTTGGGGACTAGTTGGATGGGAGGAGTATAGTGTTATTACT 360
Query 390 TTAACT-ACTTACTCACACTTCAAAATCGAACATACCGATGTTCCATTATCTTACTACAC 448
|||||| | ||||||||| ||||||||| |||| |||||||| || ||||||||||||||
Sbjct 361 TTAACTCA-TTACTCACATTTCAAAATCCAACACACCGATGTCCCGTTATCTTACTACAC 419
Query 449 TGGACTTCTTGGTATGCCTGGTATGACTGCTTATGCTGGATTTTACGAAGTTTGTTCACC 508
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 420 TGGACTTCTTGGTATGCCTGGTATGACTGCTTATGCTGGATTTTACGAAATTTGTTCACC 479
Query 509 TAAAAAAGGAGAGACTGTCTTCGTGTCAGCTGCATCCGGCGCGGTTGGTCAGCTCGTGGG 568
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 480 TAAAAAAGGAGAGACTGTCTTCGTGTCAGCTGCATCTGGCGCGGTTGGTCAGCTCGTGGG 539
Query 569 ACAATTTGCAAAGTTGATGGGTTGTTATGTCGTTGGTAGTGCTGGCAGTAAAGAAAAGGT 628
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 540 ACAATTTGCAAAGTTGATGGGTTGTTATGTCGTTGGTAGTGCCGGCAGTAAAGAAAAGGT 599
Query 629 TTATCTACTCAAGACAAAGTTTGGGTTTGATGATGCTTTCAATTACAAGGAAGAGAAGGA 688
| |||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 600 TGATCTTCTCAAGACTAAGTTTGGGTATGATGATGCTTTCAATTACAAGGAAGAGAAGGA 659
Query 689 CTTTAGTGCTGCCCTAAAGAGGTATTTTCCGGAAGGGATCGACATATATTTTGAGAACGT 748
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 CTTTAGTGCTGCCCTAAGGAGGTATTTTCCGGAAGGGATCGACATATATTTTGAGAACGT 719
Query 749 TGGAGGCAAAATGTTAGATGCCGTACTCATAAACATGAAGTTGCATGGTCGTGTCGCAGT 808
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 720 TGGAGGCAAAATGTTAGATGCCGTACTCATAAACATGAGGTTGCATGGTCGTGTCGCAGT 779
Query 809 ATGTGGAATGATCTCACAGTATAATTTAGTGGATCCAGAAGGCGTACACAACTTACCCAC 868
||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| ||
Sbjct 780 ATGTGGAATGATCTCACAGTACAATTTAGAGGATCCAGAAGGCGTACACAACCTACCGAC 839
Query 869 CATTCTTTACAAGAGGATACAACTTCAAGGGTTTGGTGTTTGTGATTTCTACGACAAATA 928
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 840 CATCCTTTACAAGAGGATACAACTTCAAGGGTTTGGGGTTTGTGATTTCTACGACAAATA 899
Query 929 TCCTAAGTTTTTGGATTTTGTGCTTCCTTACATTAGAGAAGGGAAGATAACATACGTTGA 988
| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 900 TTCAAAGTTTTTGGATTTTGTGCTTCCTTACATTAGAGAAGGGAAGATAAGATACGTTGA 959
Query 989 GGATATAGCGGAAGGATTCGAGAGTGGACCTTCTGCTCTTTTAGGACTCTTCGAAGGTAA 1048
||| ||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||
Sbjct 960 GGACATAGCGGAAGGATTCGAGAGTGGGCCTTCAGCTCTGCTAGGACTCTTTGAAGGTAA 1019
Query 1049 GAACGTCGGGAAACAACTATTTGTGGTTGCTCGTGAGTGAGACGTTGAAGGTTTCATATT 1108
||||||||||||||||| |||||||||||||||||||||| | || | ||| | ||
Sbjct 1020 AAACGTCGGGAAACAACTCTTTGTGGTTGCTCGTGAGTGAGT-GA-GACGTTTTTTTTTT 1077
Query 1109 ATATGGTGTTGTTCTTTGAA--AAG--TAGATTATGATTCTTTGTTTTTAGTTTTGTTCG 1164
| | | || || |||||| || |||||||||| ||||||||||||||||||||||
Sbjct 1078 TTTTTTTTTT-TT-TTTGAATCAAAACTAGATTATGACTCTTTGTTTTTAGTTTTGTTCG 1135
Query 1165 GACAAGTCATTTCCTTGACACATGGGAATAATAATCGCATTT 1206
||||||||||||||| || |||||| ||||| || |||||||
Sbjct 1136 GACAAGTCATTTCCTCGAGACATGGAAATAAGAAACGCATTT 1177
> Ahg903120 jgi|Araly1|903120|Al_scaffold_0003_248
Length=1056
Score = 850 bits (460), Expect = 0.0
Identities = 862/1053 (82%), Gaps = 39/1053 (4%)
Strand=Plus/Plus
Query 54 ACGGTGACCAACAAGCAAATCATATTCCCAGACTATGTTACTGGATTT-CCAAAAGAATC 112
||||||||||||||||| | ||| | | ||| || || || || ||| || || |||||
Sbjct 25 ACGGTGACCAACAAGCAGGTGATACTGCGAGATTACGTCACCGG-TTTCCCCAAGGAATC 83
Query 113 TGATCTTAAAATAACCACA-ACTACCATTGATCTAAGGCTTCCGGAGGGATCCACCTCAG 171
|| || | | ||| | | ||||| ||| ||| | ||||||||||||| | | |
Sbjct 84 AGACCTCATCTTCACC-GATTCCACCATCGATTTAAAGATTCCGGAGGGATCGAAGACGG 142
Query 172 TACTGGTGAAGAATCTTTACTTGTCTTGCGATCCTTACATGCGCATTTGCATGGGAAAGC 231
| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
Sbjct 143 TTCTGGTGAAGAATCTCTACTTGTCTTGCGATCCTTACATGCGCATTCGCATGGGAATTC 202
Query 232 CCGATCCCTTGT-CTTCTTCCCTTGTTCCACCTTACAAGACCGGCGTGCCAA-TCATTGG 289
|||||||| || || || | || | ||||||||||| |||||| ||||| | | |||
Sbjct 203 CCGATCCC-GGTACTGCTGCGCTCGCTCCACCTTACATTCCCGGCGAGCCAATTTA-TGG 260
Query 290 GCTTGGAGTGTCTAAAGTGATTGATTCAGGACATCCAGATTACAAAAAGGGAGACTTACT 349
| || |||||| |||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct 261 GTTTTCAGTGTCAAAAGTGATAGATTCTGGGCATCCAGATTACAAAAAGGGAGACTTACT 320
Query 350 TTGGGGACTAGTTGGATGGGAGGAGTACAGTGTTATTACTTTA-ACTACTTACTCACACT 408
||||||| |||||||||||| |||||||||| |||| ||| | | | || ||||| |
Sbjct 321 TTGGGGATTAGTTGGATGGGGGGAGTACAGTCTTATAACTCCAGATT--TT--TCACA-T 375
Query 409 T-CAAAATCGAACATACCGATGTTCCATTATCTTACTACACTGGACTTCTTGGTATGCCT 467
| ||| ||| |||| ||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct 376 TACAAGATCCAACACACCGATGTTCCGTTATCCTACTACACTGGACTTCTCGGTATGCCT 435
Query 468 GGTATGACTGCTTATGCTGGATTTTACGAAGTTTGTTCACCTAAAAAAGGAGAGACTGTC 527
||||||||||| |||||||| ||||| ||| | ||||| ||||| |||||||| ||||||
Sbjct 436 GGTATGACTGCCTATGCTGGGTTTTATGAAATCTGTTCTCCTAAGAAAGGAGAAACTGTC 495
Query 528 TTCGTGTCAGCTGCATCCGGCGCGGTTGGTCAGCTCGTGGGACAATTTGCAAAG-TTGAT 586
||||||||||||||||| || || |||||||||||||||||||||||||||||| || ||
Sbjct 496 TTCGTGTCAGCTGCATCGGGTGCAGTTGGTCAGCTCGTGGGACAATTTGCAAAGATT-AT 554
Query 587 GGGTTGTTATGTCGTTGGTAGTGCTGGCAGTAAAGAAAAGGTTTATCTACTCAAGA-CAA 645
||| || ||||||||||| ||||| |||||||| ||||||||| |||| ||||||| |||
Sbjct 555 GGGCTGCTATGTCGTTGGAAGTGCAGGCAGTAATGAAAAGGTTGATCTTCTCAAGAACAA 614
Query 646 AGTTTGGGTTTGATGATGCTTTCAATTACAAGGAAGAGAAGGACTTTAGTGCTGCCCTAA 705
||| ||||||||||| || ||||||||||| |||||||| ||| ||| || |||||| |
Sbjct 615 -GTTCGGGTTTGATGACGCATTCAATTACAAAGAAGAGAAAGACCTTAATGTTGCCCTGA 673
Query 706 AGAGGTATTTTCCGGAAGGGATCGACATATATTTTGAGAACGTTGGAGGCAAAATGTTAG 765
|||||| ||| |||||||| ||||||||||| ||||||||||| |||||||||||| |||
Sbjct 674 AGAGGTGTTTCCCGGAAGGAATCGACATATACTTTGAGAACGTAGGAGGCAAAATGCTAG 733
Query 766 ATGCCGTACTCATAAACATGAAGTTGCATGGTCGTGTCGCAGTATGTGGAATGATCTCAC 825
| || || ||| ||||||||||| | || || ||| ||||||||||||| ||||||||||
Sbjct 734 ACGCAGTGCTCCTAAACATGAAGCTACACGGCCGTATCGCAGTATGTGGTATGATCTCAC 793
Query 826 AGTATAAT-TTAGTGGATCCAG-AAGGCGTACACAACTTACCCACCATTCTTTACAAGAG 883
|||| || || | ||| |||| |||| ||||||||| || | | | | | |||||| |
Sbjct 794 AGTACAACCTT-GAGGA-CCAGGAAGGTGTACACAACCTAGCAAACGTGATCTACAAGCG 851
Query 884 GATACA-ACTTCAAGGGTT--TGGTGTTTGTGATTTCTACGACAAATATCCTAA-GTTTT 939
||| | | |||||||||| |||||| || ||| || |||||| | | ||| |||
Sbjct 852 GATTCGGA-TTCAAGGGTTCGTGGTGTCTG--ATTACTTTGACAAACA-CTTAAAGTTCC 907
Query 940 TGGATTTTGTGCTTCCTTACATTAGAGAAGGGAAGATAACATACGTTGAGGATATAGCGG 999
|||||||||||||||| || || |||||||| |||||||| || ||||||||||||| |
Sbjct 908 TGGATTTTGTGCTTCCGTATATAAGAGAAGGAAAGATAACTTATGTTGAGGATATAGTTG 967
Query 1000 AAGGA-TTCGAGAGTGGACCTTCTGCTCTT--TTAGGACTCTTCGAAGGTAAGAACGTCG 1056
||||| || |||| |||||||| ||| || || ||||| ||| | |||||||||||||
Sbjct 968 AAGGACTT-GAGAACGGACCTTCAGCT-TTGCTT-GGACTGTTCCATGGTAAGAACGTCG 1024
Query 1057 GGAAACAACT-ATTTGTGGTTGCTCGTGAGTGA 1088
| |||||||| || ||||||||| ||| |||
Sbjct 1025 GCAAACAACTCATAC-TGGTTGCTCCTGAATGA 1056
> Ahg941200 jgi|Araly1|941200|scaffold_601744.1
Length=1078
Score = 726 bits (393), Expect = 0.0
Identities = 848/1062 (80%), Gaps = 54/1062 (5%)
Strand=Plus/Plus
Query 54 ACGGTGACCAACAAGCAAATCATATTCCCAGACTATGTTACTGGATTT-CCAAAAGAATC 112
|||| ||| |||||||| ||||||| |||||| || | ||| ||| || || |||||
Sbjct 24 ACGGCGACAAACAAGCAGGTCATATTGAAAGACTACGTGAGTGG-TTTCCCTAAGGAATC 82
Query 113 TGATCTT-AAAAT-AACCA-CAACTACCATTG-ATCTAAGGCTTCC-GGAGGGATCCACC 167
|| || | | || | |||| ||| | | || ||||| |||| |||||| || |
Sbjct 83 CAAT-TTCGATTTCAA-GACCAAC-ACCGTCGAATTTAAGG-TTCCGGGAGGG-TCTAAT 137
Query 168 TCAGTACTGGTGAAGAATCTTTACTTGTCTTGCGATCCTTACATGCGCATTTGCAT-GGG 226
||||| |||||||||||||| ||| |||| ||||||||||||||||| ||| |||| |||
Sbjct 138 TCAGTTCTGGTGAAGAATCTCTACCTGTCATGCGATCCTTACATGCGTATTCGCATGGGG 197
Query 227 AAAGCCCGATCCCTTGTCTTCTTCCCTTGTTCCACCTTACAAGACCGGCGTGCCAATCAT 286
||| || ||||||| || || | |||| || | ||||| ||||| ||||||| |
Sbjct 198 AAA-CCTGATCCCTCCACTGCTGCTCTTGCTCAAGCTTACGCTCCCGGCCAGCCAATCTT 256
Query 287 TGGGCT-TGGAGTGTCTAAAGTGATTGATTCAGGACATCCAGATTACAA-AAAGGGAGAC 344
|||| | ||||||||||| ||| ||||| || |||||||| |||||||| ||| || ||
Sbjct 257 TGGG-TATGGAGTGTCTAGAGTTATTGAATCTGGACATCCTGATTACAAGAAA-GGTGAT 314
Query 345 TTACTTTGGGGACTAGTTGGATGGGAGGAGTACAGTGTTATTACTTTAACT-ACTTAC-T 402
||||| |||||| ||||||||||||||||||| |||||||||||| || | ||| || |
Sbjct 315 TTACTCTGGGGAATAGTTGGATGGGAGGAGTATAGTGTTATTACTCCAA-TGACTCACAT 373
Query 403 CACACTTCAAAATCGAACATACCGATGTTCCATTATCTTACTACACTGGACTTCTTGGTA 462
|| ||||| ||| ||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 374 -GCATTTCAAGATCCAACATACCGATGTTCCATTATCTTACTACGCTGGACTTCTCGGTA 432
Query 463 TGCCTGGTATGACTGCTTATGCTGGATTTTACGAAGTTTGTTCACCTAAA-AAAGGAGAG 521
|||| ||||||||||| |||||||| ||||| ||||||||||| || ||| |||||||||
Sbjct 433 TGCCCGGTATGACTGCCTATGCTGGGTTTTATGAAGTTTGTTCCCC-AAAGAAAGGAGAG 491
Query 522 ACTGTCT-TCGTGTCAGCTGCATCCGGCGCGGTTGGTCAGCTCGTGGGACAATTTGCAAA 580
|| || | | |||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct 492 ACGGTTTAT-GTGTCAGCTGCATCTGGTGCAGTTGGTCAGCTTGTGGGACAATTTGCTAA 550
Query 581 GTTGATGGGTTGTTATGTCGTTGGTAGTGCTGGCAGTAAAGAAAAGGTTTATCTACTCAA 640
| ||||||| |||||||| ||||| ||||| || | |||||||| ||| |||| |||||
Sbjct 551 GATGATGGGCTGTTATGTTGTTGGAAGTGCCGGTACCAAAGAAAAAGTTGATCTCCTCAA 610
Query 641 GACAAAGTTTGGGTTTGATGATGC-TTTCAATTACAAGGAAGAGA--AGGACTTTAGTGC 697
||| |||||||| ||||||||||| ||| || ||||||||||| | || || ||| |||
Sbjct 611 GACCAAGTTTGGATTTGATGATGCATTT-AACTACAAGGAAGA-ACCAG-ACCTTACTGC 667
Query 698 TGCCCT-AAAGAGGTATTTTCCGGAAGGGATCGACATATATTTTGAGAACGTTGGAGGCA 756
|||||| ||| |||| |||||| |||| ||||||||||| ||||||||||| |||||||
Sbjct 668 TGCCCTCAAA-AGGTGTTTTCCCAAAGGCATCGACATATACTTTGAGAACGTAGGAGGCA 726
Query 757 AAATGTTAGATGCCGTACTCATAAACATGAAGTTGCAT-GGTCGTGTCGCAGTATGTGGA 815
||||| |||| || || ||| |||||||||| | | || ||| | || || ||||||
Sbjct 727 AAATGCTAGACGCAGTGCTCTTAAACATGAACCCAC-TCGGGCGTATAGCTGTCTGTGGA 785
Query 816 ATGATCTCACAGTATAAT-TTAGTGGATCCA-GAAGGCGTACACAACTTACCCACCATTC 873
|||||||||||||| ||| || | | ||| ||||| ||||||||| || ||| |||
Sbjct 786 ATGATCTCACAGTACAATCTT-GAAAA-CCAAGAAGGTGTACACAACCTATCCAACATAA 843
Query 874 TTTACAAGAGGA-TACA-ACTTCAAGGGTTTGGT-GTT-TGTGATTTCTACGACAAATA- 928
| ||||| | || | | | |||||||||||| | || | ||||||||||||||||||
Sbjct 844 TCTACAA-ACGAATCCGCA-TTCAAGGGTTTG-TAGTCCT-TGATTTCTACGACAAATAC 899
Query 929 TCCTAAGTTTTTGGATTTTGTGCTTCCTTACATTAGAGAAGGGAAGATAACATACGTTGA 988
|| ||||| ||||| ||||||||||| | ||| | |||||||||||| || ||||| ||
Sbjct 900 TCA-AAGTTCTTGGAGTTTGTGCTTCCGTGCATCAAAGAAGGGAAGATCACGTACGTGGA 958
Query 989 GGATATAGCGGAAGGA-TTCGAGAGTGGACCTTCTGCTCTTTTAGGACTCTTCGAAGGTA 1047
||| | || || || || |||| | ||| |||||| | ||||||||| | ||||
Sbjct 959 AGATGTGGCTGATGGGCTT-GAGAAAGCTCCTGAAGCTCTTGTGGGACTCTTCCATGGTA 1017
Query 1048 AGAACGTCGGGAAACAACTAT-TTGTGGTTGCTCGTGAGTGA 1088
||||||| ||||||||| | | |||| ||||||||||||||
Sbjct 1018 AGAACGTTGGGAAACAAGT-TGTTGTTATTGCTCGTGAGTGA 1058
> Ahg941198 jgi|Araly1|941198|scaffold_601742.1
Length=1083
Score = 726 bits (393), Expect = 0.0
Identities = 845/1059 (80%), Gaps = 48/1059 (5%)
Strand=Plus/Plus
Query 54 ACGGTGACCAACAAGCAAATCATATTCCCAGACTATGTTACTGGATTT-CCAAAAGAATC 112
|||| ||| |||||||| ||||||| |||||| || | ||| ||| || || |||||
Sbjct 29 ACGGCGACGAACAAGCAGGTCATATTGAAAGACTACGTGAATGG-TTTCCCTAAGGAATC 87
Query 113 TGATCTT-AAAATAACCACAACTACCATTGATC-TAAGGCTTCCGGAGGGATCCACCTCA 170
||| || | | || || || ||| | || | ||||| ||||||| || || | |||
Sbjct 88 CGAT-TTCGATTTCACAACCACCACCGTCGAACTTAAGG-TTCCGGAAGGTTCTAACTCG 145
Query 171 GTACTGGTGAAGAATCTTTACTTGTCTTGCGATCCTTACATGCGCATTTGCAT-GGGAAA 229
|| |||||||||||||| |||||||| ||||||||||||||| | ||| |||| ||||||
Sbjct 146 GTTCTGGTGAAGAATCTCTACTTGTCATGCGATCCTTACATGAGGATTCGCATGGGGAAA 205
Query 230 GCCCGATCCCTT-GTCTTCTTCCCTTGTTCCACCTTACAAGACCGGCGTGCCAAT-CATT 287
|| ||| |||| || || | |||| || | |||||| ||||| |||||| ||
Sbjct 206 -CCTGAT-CCTTCCACTGCTGCTCTTGCTCAAGCTTACACTCCCGGCCAGCCAATCCA-A 262
Query 288 GGGCT-TGGAGTGTCTAAAGTGATTGATTCAGGACATCCAGATTACAAAAAGGGAGACTT 346
||| | || |||||| | |||||| || || |||||||||||||||||||| ||||||||
Sbjct 263 GGG-TATGTAGTGTCCAGAGTGATAGAATCTGGACATCCAGATTACAAAAAAGGAGACTT 321
Query 347 ACTTTGGGG-ACTAGTTGGATGGGAGGAGTACAGTGTTATTACTTTAACTA-CTTAC-TC 403
||| ||||| | |||||| ||||||||||||| |||||| ||| ||| | || || |
Sbjct 322 ACTCTGGGGTA-TAGTTGCATGGGAGGAGTACTCTGTTATCACTCCAAC-ACCTCACGT- 378
Query 404 ACACTTCAAAATCGAACATACCGATGTTCCATTATCTTACTACACTGGACTTCTTGGTAT 463
|| ||||| ||| | |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 379 GCATTTCAAGATCCAGCATACCGATGTTCCATTATCTTACTACACTGGACTTCTCGGTAT 438
Query 464 GCCTGGTATGACTGCTTATGCTGGATTTTACGAAGTTTGTTCACCTAAA-AAAGGAGAGA 522
||| ||||||||||| |||||||| ||||| ||||||||||| || ||| ||||||||||
Sbjct 439 GCCCGGTATGACTGCCTATGCTGGGTTTTATGAAGTTTGTTCTCC-AAAGAAAGGAGAGA 497
Query 523 CTGTCT-TCGTGTCAGCTGCATCCGGCGCGGTTGGTCAGCTCGTGGGACAATTTGCAAAG 581
| || | | |||||||||||||| || |||||||||||||| ||||| |||||||| |||
Sbjct 498 CAGTTTAT-GTGTCAGCTGCATCTGGTGCGGTTGGTCAGCTTGTGGGGCAATTTGCTAAG 556
Query 582 TTGATGGGTTGTTATGTCGTTGGTAGTGCTGGCAGTAAAGAAAAGGTTTATCTACTCAAG 641
|| |||| || ||||| ||||| || || || || |||||||||||| |||| ||||||
Sbjct 557 ATGTTGGGCTGCTATGTTGTTGGAAGCGCCGGTAGCAAAGAAAAGGTTGATCTCCTCAAG 616
Query 642 ACAAAGTTTGGGTTTGATGATGC-TTTCAATTACAAGGAAGAGAAG-GACTTTAGTGCTG 699
|| |||||||||||||||||||| ||| || ||||||||||| | ||| ||| |||||
Sbjct 617 ACCAAGTTTGGGTTTGATGATGCATTT-AACTACAAGGAAGA-ACCTGACCTTACTGCTG 674
Query 700 CCCT-AAAGAGGTATTTTCCGGAAGGG-ATCGACATATATTTTGAGAACGTTGGAGGCAA 757
|||| ||| |||| ||| || || || || |||||||| |||||||| || ||||||||
Sbjct 675 CCCTCAAA-AGGTGTTTCCCT-AATGGCATTGACATATACTTTGAGAATGTAGGAGGCAA 732
Query 758 AATGTTAGATGCCGTACTCATAAACATGAAGTTGCATGGTCGTGTCGCAGTATGTGGAAT 817
|||| |||| || || ||| |||||||||| || || ||| |||| || ||||||||
Sbjct 733 AATGCTAGACGCAGTGCTCGTAAACATGAACCCACACGGGCGTATCGCTGTCTGTGGAAT 792
Query 818 GATCTCACAGTATAAT-TTAGTGGATCCAG-AAGGCGTACACAACTTACCCACCATTCTT 875
|||||||||||| ||| || | | | |||| |||| ||||||||| || ||| ||| |
Sbjct 793 GATCTCACAGTACAATCTT-GAGAA-CCAGGAAGGTGTACACAACCTATCCAACATAATC 850
Query 876 TACAAGAGGA-TACA-ACTTCAAGGGTTTGGT-GTTTGTGATTTCTACGACAAATA-TCC 931
||||| | || | | | ||||||| |||| | |||| ||||||||| |||||||| ||
Sbjct 851 TACAA-ACGAATCCGCA-TTCAAGGCTTTG-TAGTTTCTGATTTCTATGACAAATACTCA 907
Query 932 TAAGTTTTTGGATTTTGTGCTTCCTTACATTAGAGAAGGGAAGATAACATACGTTGAGGA 991
||||| ||||| ||||||||||| |||||||||||||||||||||| ||||| || ||
Sbjct 908 -AAGTTCTTGGAGTTTGTGCTTCCGCACATTAGAGAAGGGAAGATAACGTACGTGGAAGA 966
Query 992 TATAGCGGAAGGATTCGAGAGTGGACCTTCTGCTCTT-TTAGGACTCTTCGAAGGTAAGA 1050
| |||| || || |||||| | ||| ||||| || ||||||||| | |||||||
Sbjct 967 TGTAGCTGATGGGCTCGAGAAAGCTCCTGAAGCTCTCGTT-GGACTCTTCCATGGTAAGA 1025
Query 1051 ACGTCGGGAAACAACTAT-TTGTGGTTGCTCGTGAGTGA 1088
| || ||||||||| | | |||| ||||||||||||||
Sbjct 1026 ATGTTGGGAAACAAGT-TGTTGTTATTGCTCGTGAGTGA 1063
> Ahg941199 jgi|Araly1|941199|scaffold_601743.1
Length=1083
Score = 712 bits (385), Expect = 0.0
Identities = 844/1060 (80%), Gaps = 53/1060 (5%)
Strand=Plus/Plus
Query 54 ACGGTGACCAACAAGCAAATCATATTCCCAGACTATGTTACTGGATTT-CCAAAAGAATC 112
|||| ||| |||||||| | | ||| |||||| || | ||| ||| || || |||||
Sbjct 32 ACGGCGACGAACAAGCAGGTGACATTGAAAGACTACGTGAGTGG-TTTCCCTAAGGAATC 90
Query 113 TGATCTT-AAAATAACCACAACTACCATTGATC-TAAGGCTTCCGGAGGGATCCACCTCA 170
||| || | | ||||| || ||| | || | ||||| ||||||| || || | |||
Sbjct 91 CGAT-TTCGATTTCACCACCACCACCGTCGAACTTAAGG-TTCCGGAAGGTTCTAACTCG 148
Query 171 GTACTGGTGAAGAATCTTTACTTGTCTTGCGATCCTTACATGCGCATTTGCATG-GGAAA 229
|| |||||||| ||||| ||| |||| ||||||||||||||||| | | ||||| | |||
Sbjct 149 GTTCTGGTGAAAAATCTCTACCTGTCATGCGATCCTTACATGCGGACTCGCATGAGCAAA 208
Query 230 GCCCGATCCCTTGTCTTCTTCCCTTGTTCCACCTTACAAGACCGGCGTGCCAATCAT-TG 288
|| | || || || | |||| || | |||||| ||||| ||||||| | ||
Sbjct 209 --CCTAAACC--ATCCACTGCTCTTGCTCAAGCTTACACTCCCGGCCAGCCAATC-TCTG 263
Query 289 GGCT-TGGAGTGTCTAAAGTGATTGATTCAGGACATCCAGATTA-CAAAAAGGGAGACTT 346
|| | ||||||||||| |||||| || || |||||||||||||| |||||| || || ||
Sbjct 264 GG-TATGGAGTGTCTAGAGTGATAGAATCCGGACATCCAGATTACCAAAAA-GGCGATTT 321
Query 347 ACT-TTGGGGACTAGTTGGATGGGAGGAGTACAGTGTTATTACTTTAACTACTT-AC-TC 403
||| | ||||| |||||||||||||||||||||||||||| ||| ||| || | | |
Sbjct 322 ACTCTGGGGGA-TAGTTGGATGGGAGGAGTACAGTGTTATCACTCCAAC-ACCTCAAGTT 379
Query 404 ACACTTCAAAATCGAACATACCGATGTTCCATTATCTTACTACACTGGACTTCTTGGTAT 463
|| ||||| ||| | |||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct 380 -CATTTCAAGATCCAGCATACCGATGTTCCATTATCCTACTATACTGGACTTCTCGGTAT 438
Query 464 GCCTGGTATGACTGCTTATGCTGGATTTTACGAAGTTTGTTCACCTAAA-AAAGGAGAGA 522
||||||||||||||| |||||||| ||||| ||||||||||| || ||| ||||||||||
Sbjct 439 GCCTGGTATGACTGCCTATGCTGGGTTTTATGAAGTTTGTTCCCC-AAAGAAAGGAGAGA 497
Query 523 CTGTCT-TCGTGTCAGCTGCATCCGGCGCGGTTGGTCAGCTCGTGGGACAATTTGCAAAG 581
| || | | |||||||||||||| || |||||||||||||| ||||||||| |||| |||
Sbjct 498 CGGTTTAT-GTGTCAGCTGCATCTGGTGCGGTTGGTCAGCTTGTGGGACAACTTGCTAAG 556
Query 582 TTGATGGGTTGTTATGTCGTTGGTAGTGCTGGCAGTAAAGAAAAGGTTTATCTACTCAAG 641
||||||| |||||||| ||||| || || || || |||||||||||| |||| ||||||
Sbjct 557 ATGATGGGCTGTTATGTTGTTGGAAGCGCCGGTAGCAAAGAAAAGGTTGATCTCCTCAAG 616
Query 642 ACAAAGTTTGGGTTTGATGATGC-TTTCAATTACAAGGAAGAGA--AGGACTTTAGTGCT 698
|| |||||||||||||||||||| ||| || ||||||||||| | || || ||||||||
Sbjct 617 ACCAAGTTTGGGTTTGATGATGCATTT-AACTACAAGGAAGA-ACCAG-ACCTTAGTGCT 673
Query 699 GCCCT-AAAGAGGTATTTTCCGGAAGGGATCGACATATATTTTGAGAACGTTGGAGGCAA 757
||||| ||| |||| ||| || |||| || |||||||| ||||||||||| ||||||||
Sbjct 674 GCCCTCAAA-AGGTGTTTCCCCAAAGGCATAGACATATACTTTGAGAACGTAGGAGGCAA 732
Query 758 AATGTTAGATGCCGTACTCATAAACATGAAGTTGCATGGTCGTGTCGCAGTATGTGGAAT 817
|||| ||||||| || ||| |||||||||| || || ||| |||| || ||||||||
Sbjct 733 AATGCTAGATGCAGTGCTCTTAAACATGAACCCACACGGACGTATCGCTGTGTGTGGAAT 792
Query 818 GATCTCACAGTATAAT-TTAGTGGATCCA-GAAGGCGTACACAACTTACCCACCATTCTT 875
|||||||||||| ||| || | | ||| ||||| ||||||||| || ||| ||| |
Sbjct 793 GATCTCACAGTACAATCTT-GAAAA-CCAAGAAGGTGTACACAACCTATCCAACATAATC 850
Query 876 TACAAGAGGA-TACA-ACTTCAAGGGTTTG-G-TGTTTGTGATTTCTACGACAAATA-TC 930
||||| | || | | | ||||||| |||| | |||||| ||| |||||||||||| ||
Sbjct 851 TACAA-ACGAATCCGCA-TTCAAGGCTTTGCGGTGTTTG--ATTACTACGACAAATACTC 906
Query 931 CTAAGTTTTTGGATTTTGTGCTTCCTTACATTAGAGAAGGGAAGATAACATACGTTGAGG 990
||||| ||||| ||||||||||| | ||||| ||||||||||||||| || || || |
Sbjct 907 A-AAGTTCTTGGAGTTTGTGCTTCCGTGCATTAAAGAAGGGAAGATAACGTATGTGGAAG 965
Query 991 ATATAGCGGAAGGA-TTCGAGAGTGGACCTTCTGCTCTTTTAGGACTCTTCGAAGGTAAG 1049
|| |||| || || || |||| || ||| |||||| | ||||||||| | ||||||
Sbjct 966 ATGTAGCTGATGGGCTT-GAGAAAGGTCCTGAAGCTCTTGTGGGACTCTTCCATGGTAAG 1024
Query 1050 AACGTCGGGAAACAACTATTT-GTGGTTGCTCGTGAGTGA 1088
||||| ||||||||| | | | || |||||||||||||||
Sbjct 1025 AACGTTGGGAAACAAGT-TGTCGTTGTTGCTCGTGAGTGA 1063
> Ahg893609 jgi|Araly1|893609|Al_scaffold_0006_1605
Length=1041
Score = 621 bits (336), Expect = 4e-177
Identities = 824/1053 (78%), Gaps = 60/1053 (6%)
Strand=Plus/Plus
Query 54 ACGGTGACCAACAAGCAAATCATATTCCCAGACTATGTTACTGGATTT-CCAAAAGAATC 112
||| ||| |||||||||| || |||| | || || || || || ||| || || |||||
Sbjct 7 ACGATGATCAACAAGCAAGTCGTATTACGTGATTACGTAACCGGTTTTGCC-AACGAATC 65
Query 113 TGATCTTAAAATAACCACAACTACCATTGATCTAAGGCTTCCGGAGGGATCCACCTCAGT 172
|| ||| ||| ||| | || ||| | ||||| ||| | ||| ||||||| | | |
Sbjct 66 CGACCTTGTAATCACCTCCACCACCGTCGATCTTAGGGTGCCGAAGGGATCTATGACGGC 125
Query 173 ACTGGTGAAGAATCTTTACTTGTCTTGCGATCCTTACATGCGCATTTGCATGGGAAAGCC 232
||||||||||||| |||||||||||||||||||||||||| | | | ||| |||| ||
Sbjct 126 GTTGGTGAAGAATCTCTACTTGTCTTGCGATCCTTACATGCGGAATCGTATGAGAAAACC 185
Query 233 CGATCCCTTG-TCTTCTTC-CCTTGTTCCA--CCTTACAAGACCGGCGTGCCAATCAT-T 287
||||| ||| | || | | || | || |||| || ||||| ||| ||| |
Sbjct 186 TGATCCTTTGAGC-CCTGCTAC-TGCT-CAGTCCTT-CACTCCCGGCAAGCCTATC-TCA 240
Query 288 GGGCTTGGAGTGTCTAAAGTGATTGATTCAGGACATC-CAGATTAC-AAAAAGGGAGACT 345
||| ||||||||||||||||||| ||||| ||||| | |||||||| || || || ||||
Sbjct 241 GGGTTTGGAGTGTCTAAAGTGATAGATTCTGGACA-CTCAGATTACGAAGAA-GGTGACT 298
Query 346 TACTTTGGGGA-CTAGTTGGATGGGAGGAGTACAGTGTTATTACTTTAACTACTTACTC- 403
||||||||||| | ||| |||||||| ||||||||||||||||| || | | || ||
Sbjct 299 TACTTTGGGGAGC-AGTAGGATGGGAAGAGTACAGTGTTATTACACCAA-TTCCTAATCT 356
Query 404 ACACTTCAAAATCGAACATACCGATGTTCCATTATCTTACTACACTGGACTTCTTGGTAT 463
|||||||||||| | ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 357 TCACTTCAAAATCCATCATACCGATTTTCCCTTATCTTACTACACTGGACTTCTTGGTAT 416
Query 464 GCCTGGTATGACTGCTTATGCTGGATTTTACGAAGTT-TGTTCACCTAAA-AAAGGAGAG 521
|||||||||||| || |||| ||| |||||||| | | ||||| || ||| ||||||||
Sbjct 417 GCCTGGTATGACCGCATATGTTGGGTTTTACGA-GATCTGTTCTCC-AAAGAAAGGAGAT 474
Query 522 ACTGTCTTCGTGTCAGCTGCATCCGGCGCGGTTGGTCAGCTCGTGGGACAATTTGCAAAG 581
|| || || ||||||||||| || ||||||||||||||||| || ||||||||||| |||
Sbjct 475 ACCGTGTTTGTGTCAGCTGCCTCTGGCGCGGTTGGTCAGCTTGTAGGACAATTTGCTAAG 534
Query 582 TTGATGGGTTGTTATGTCGTTGGTAGTGCTGGCAGTAAAGAAAAGGTTTATCTACTCAAG 641
|||||||||||||||| ||||| |||||||| ||||||||||||||| |||| ||||||
Sbjct 535 ATGATGGGTTGTTATGTTGTTGGAAGTGCTGGAAGTAAAGAAAAGGTTGATCTCCTCAAG 594
Query 642 A-CAAAGTTTGGGTTTGATGATGCTTTCAATTACAAGGAAGAGA-AGGA-CTTTAGTGCT 698
| ||| |||||| || |||||||| ||||| ||||| ||||| | | | ||| | ||||
Sbjct 595 AACAA-GTTTGGATTCGATGATGCATTCAACTACAAAGAAGA-ACACAATCTT-ATTGCT 651
Query 699 GCCCTAAAGAGGTATTTTCCGGAAGGGATCGACATATATTTTGAGAACGTTGGAGGCAAA 758
|||||||| |||| ||| || ||||| || |||||||| ||||||||||| ||||||||
Sbjct 652 GCCCTAAAAAGGTGTTTCCCTGAAGGCATTGACATATACTTTGAGAACGTGGGAGGCAAG 711
Query 759 ATGTTAGATGCCGT-ACTCATAAACATGA-AGTTGCATGGTCGTGTCGCAGTATGTGGAA 816
||| | ||||| || | || ||||||||| | || || ||| |||| | |||||| |
Sbjct 712 ATGCTGGATGCAGTGA-TCTTAAACATGAGACCA-CACGGCCGTATCGCGGCATGTGGGA 769
Query 817 TGATCTCACAGTATAATTTAGTGGA-TCCAGAAGGCGTACACAA-CT-TACCCACCATT- 872
||||||||||||| ||| | | || ||| |||||| || || || | | | | |||
Sbjct 770 TGATCTCACAGTACAATCT-GAAGAATCCGGAAGGCATATACGGGCTCT-CGCTC-ATTA 826
Query 873 CTTTACAAGAGGA-TACA-ACTTC-AAGGGTTTGG-TGTTTGTGATTTCTACGACAAATA 928
| | |||| | || | | | | | |||||||| ||||| |||| || |||||||||
Sbjct 827 CCT-ACAA-ACGAATCCGTA-T-CGAAGGGTTTAACTGTTTC-GATTACTTCGACAAATA 881
Query 929 -TCCTAAGTTTTTGGATTTTGTGCTTCCTTACATTAGAGAAGGGAAGATAACATACGTTG 987
|| || || ||||| |||||| |||| || || |||||||| |||||||| || || |
Sbjct 882 CTCAGAA-TTCTTGGAGTTTGTGGTTCCGTATATAAGAGAAGGTAAGATAACGTATGTGG 940
Query 988 AGGATATAGCGGAAGG-ATTCGAGAGTGGACCTTCTGCTCTT-TTAGGACTCTT-CGAAG 1044
| ||| | || || || || |||||||| ||| ||||||| || |||||||| | | |
Sbjct 941 AAGATGTTGCTGATGGGAT-CGAGAGTGCTCCTGCTGCTCTCGTT-GGACTCTTTC-ACG 997
Query 1045 GTAAGAACGTCGGGAAACAACTATTT-GTGGTT 1076
|||| ||||||||||||||||| | | ||||||
Sbjct 998 GTAAAAACGTCGGGAAACAACT-TGTCGTGGTT 1029
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 46624327491
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5