BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G26380.1
Length=1792
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472781 jgi|Araly1|472781|fgenesh2_kg.1__2735__AT1G26380.1 2471 0.0
Ahg472780 jgi|Araly1|472780|fgenesh2_kg.1__2734__AT1G26390.1 1890 0.0
Ahg472778 jgi|Araly1|472778|fgenesh2_kg.1__2732__AT1G26420.1 1879 0.0
Ahg472779 jgi|Araly1|472779|fgenesh2_kg.1__2733__AT1G26410.1 1844 0.0
Ahg912411 jgi|Araly1|912411|Al_scaffold_0001_2665 821 0.0
> Ahg472781 jgi|Araly1|472781|fgenesh2_kg.1__2735__AT1G26380.1
Length=1581
Score = 2471 bits (1338), Expect = 0.0
Identities = 1503/1583 (95%), Gaps = 10/1583 (1%)
Strand=Plus/Plus
Query 15 AGCAAAATGAAAGAAGCACTTTT-TGGTTTGTATCTTGTTCTTTTGGTTTCGGGCTTAGA 73
|||||||||||||||||| |||| || ||||||||||||||||||||||||||| |||||
Sbjct 1 AGCAAAATGAAAGAAGCA-TTTTATGTTTTGTATCTTGTTCTTTTGGTTTCGGGTTTAGA 59
Query 74 AGCAGCAGTGACGAAACCAAATTCTGGAAACTTTATTGAATGCCTTCGGTATCAGG-CTA 132
|||| |||||||||||| |||||||||||||| || ||||||||||| || | || ||
Sbjct 60 AGCATTAGTGACGAAACCTAATTCTGGAAACTTCATCGAATGCCTTCGCTA-CCGGATTA 118
Query 133 GTCCGGAGAATCCAATCACCGATGCCATCTTTACCGTCGATAACACCACCACCTTCTTGT 192
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 119 GTCCGGAGAATCCAATCACCGATGCCATCTTTACAGCCGATAACACCACCACCTTCTTGT 178
Query 193 CTTCTTACGTGTCATACACGAAAAACACGAGGTTCTCGAACCCTAACAACAAAAACCTAC 252
|||||||| ||||||||||||||||||||||||| |||| ||| ||| ||||||| ||||
Sbjct 179 CTTCTTACTTGTCATACACGAAAAACACGAGGTTTTCGAGCCCAAACTACAAAAAACTAC 238
Query 253 TAGCCATCGTAGTGGCGAAAGATGTATCTCATGTTCAGGCAACGGTGGTCTGCGCAAAGT 312
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 239 TAGCCATCGTAGTGGCGAATGATGTAGCTCATGTTCAGGCAACGGTGGTCTGCGCAAAGT 298
Query 313 CCAATGGTATCCAGATCCGTATCCGAAGCGGTGGTCATGACAACGAAGGACTTTCTTACG 372
|||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct 299 CCAATGGTATCCAGATACGAATCCGAAGCGGTGGTCATGACAACGAAGGCCTTTCTTACA 358
Query 373 TGTCGTCTGTGCCATTTGTCATTCTTGATATGCACAAACTGAGGGA-TATTACTGTCGAC 431
|||||||||||||||||||||||||||||||||||| |||| ||| ||||||||| |||
Sbjct 359 CGTCGTCTGTGCCATTTGTCATTCTTGATATGCACAATCTGA-GGACTATTACTGTTGAC 417
Query 432 GTGTCAAGCAAGAAAGCATGGGTCCAAGCTGGTGCGACCTTGGGAGAGCTCTACGTGAAG 491
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 418 GTGTCAAGCAAGAAAGCATGGGTTCAAGCTGGTGCGACCTTGGGAGAGCTGTACGTGAAG 477
Query 492 ATCGATGAGGCAAGCCAAACGTTAGCGTTCCCTGCTGGCATTTGCGCTACGGTAGGAGCT 551
||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 478 ATCAATGAGGCAAGCCAAACGCTAGCATTCCCTGCTGGCATTTGCGCTACGGTAGGAGCT 537
Query 552 GGAGGACACATAAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAACCACAGTG 611
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 538 GGAGGACACATAAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAATCACAGTG 597
Query 612 GATCATGTCATTGATGCTGAATTAGTTGATGTCAACGGCAAGCTCTTGAATCGATCTACC 671
|||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||
Sbjct 598 GATCATGTCATTGATGCTCAATTAATTGATGTCAACGGCAAGCTCCTGAATCGATCTTCC 657
Query 672 ATGGGAGAAGATCTCTTTTGGGCGATTCGCGGCGGTGGTGGTGCGAGTTTCGGAGTTATA 731
||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct 658 ATGGGAGAAGATCTCTTTTGGGCGATTCGTGGTGGTGGTGGTGCAAGTTTCGGAGTTATC 717
Query 732 CTCTCTTGGAAAATAAACCTCGTGGAGGTTCCAAAGATCTTTACAGTGTTTCAGGTTAAC 791
|||||||||||||| || ||||| ||||||||||||||||| ||||||||| ||||||||
Sbjct 718 CTCTCTTGGAAAATCAAGCTCGTTGAGGTTCCAAAGATCTTGACAGTGTTTAAGGTTAAC 777
Query 792 AAAACATTGGAACAAGGAGGCACTGATGTTGTCTACAAGTGGCAGCTTGTCGCTAACAAA 851
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 778 AAAACATTGGAACAAGGAGGCACTGATGTTCTCTACAAGTGGCAGCTTGTCGCTAACAAA 837
Query 852 TTCCCTGATAATCTTTTCTTGAGAGCAATGCCTCAGGTAGTAAATGGAACAAAACACGGC 911
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 838 TTCCCTGATAATCTTTTCTTGAGAGCAATGCCTCAGGTCGTAAATGGAACAAATCACGGT 897
Query 912 GAGAGAACCATCGCGATTGTATTCTGGGCTCAGTTCTTGGGTCGAACCGATGAGCTGATG 971
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 GAGAGAACCATCGCGGTTGTATTCTGGGCTCAGTTCTTGGGTCGAACCGATGAGCTGATG 957
Query 972 G-AGATAATGAACCAGAGCTTTCCTGAATTAGGGCTAAGACGTGAAGATTGTCAAGAAAT 1030
| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 GCA-ATAATGAAGCAGAGCTTTCCTGAATTAGGGCTAAGACGTGAAGATTGTCAAGAAAT 1016
Query 1031 GAGCTGGCTTAACACGACGTTGTTTTGGGCTATGTTACCAGCGGGTACTCCGAAGACCGT 1090
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1017 GAGCTGGCTTAACACGACGTTGTTTTGGGCCATGTTACCAGCGGGTACACCGAAGACCGT 1076
Query 1091 CCTTCTAGGTAGACCTACGGATCCAGTATTCTTTAAGAGTAAATCGGATTACGTCAAAAA 1150
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 CCTTCTAGATAGACCTACGGATCCAGTATTCTTTAAGAGTAAATCGGATTACGTCAAAAA 1136
Query 1151 GCCAATCCCCAAAGAAGGACTGGAGAAGATTTGGAAGACAATGTTGAAATTCAACAATAT 1210
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 GCCAATCCCCAAAGAAGGATTGGAGAAGATTTGGAAGACAATGTTGAAATTCAACAATAT 1196
Query 1211 TGTGTGGCTGCACTTCAACCCTTACGGTGGAATGATGGATCGGATTCCGTCAAACGCCAC 1270
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 1197 TGTGTGGCTGCACTTCAACCCTTACGGTGGAATGATGGCCCGGATTCCGGCAAACGCCAC 1256
Query 1271 AGCGTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTATACCACATGGTTGGA 1330
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1257 AGCGTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTATACTACATGGTTGGA 1316
Query 1331 CCCAAACGCCACAGAGAGTAACCTGAGTATTATGAAGGAGCTCTACGAGGTTGCAGAACC 1390
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1317 CCCAAACGCCACAGAGAGTAACTTGAGTATGATGAAGGAGCTCTACGAGGTTGCAGAACC 1376
Query 1391 GTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTACAGAGACATTGATATTGGAAG 1450
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1377 GTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTACAGAGACATCGATATTGGAAG 1436
Query 1451 CAATCCAAGCGGTGAGACAGACGTGGATGAGGCTAAGATCTATGGATACAAGTATTTCTT 1510
||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 1437 CAATCCAAGTGGTGAGACAAACGTGGACGAGGCTAAGATCTATGGATACAAGTATTTCTT 1496
Query 1511 GGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAG-AGTGATCCTGAGAATTTCTTCA 1569
||||||||||||||||||||||||||||||||||||| | ||||||||| || |||||||
Sbjct 1497 GGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTA-TGATCCTGATAACTTCTTCA 1555
Query 1570 AAAACGAACAGAGTATTCCCCCT 1592
| ||||| |||||||||||||||
Sbjct 1556 AGAACGAGCAGAGTATTCCCCCT 1578
> Ahg472780 jgi|Araly1|472780|fgenesh2_kg.1__2734__AT1G26390.1
Length=1653
Score = 1890 bits (1023), Expect = 0.0
Identities = 1405/1588 (88%), Gaps = 32/1588 (2%)
Strand=Plus/Plus
Query 20 AATGAAAGAAGCACTTTTTGGTTTGTATCTTGTTCTTTTGGTTTCGGGCTTAGAAGCAGC 79
||||||||||||||||| || ||||| |||||| ||| ||||||||| |||||||||||
Sbjct 1 AATGAAAGAAGCACTTTCTGTTTTGTGTCTTGTACTTCTGGTTTCGGTTTTAGAAGCAGC 60
Query 80 AGTGACGAAACC-AAATTCTGGAA-ACTTTATTGAATGCCTTCGGTATCAG-GCTAGTCC 136
||| |||||||| ||||| | ||| |||| || | ||||||||| |||| | |||||||
Sbjct 61 AGTAACGAAACCAAAATT-T-GAAGACTTCATCGGATGCCTTCGCTATC-GTACTAGTCC 117
Query 137 GGAGAATCCAATCACCGATGCCATCTTTACCGTCGATAACACCACCACCTTCTTGTCTTC 196
|||||||||||||||||||||||||| | || ||||||||||||| |||||||||| ||
Sbjct 118 GGAGAATCCAATCACCGATGCCATCTCCATCGCCGATAACACCACCGCCTTCTTGTCCTC 177
Query 197 TTACGTGTCATACACGAAAAACACGAGGTTCTCGAACCCTAACAACAAAAACCTACTAGC 256
|||||| || ||||||||||||| ||||||| || |||||| | ||||| ||||||||
Sbjct 178 TTACGTATCCTACACGAAAAACAAAAGGTTCTTGAGCCCTAATTATAAAAAACTACTAGC 237
Query 257 CATCGTAGTGGCGAAAGATGTATCTCATGTTCAGGCAACGGTGGTCTGCGCAAAGTCCAA 316
||| || | || ||| ||| ||||||||||||||| ||||| |||||||||||||||||
Sbjct 238 CATAGTGGCCGCAAAACATGCATCTCATGTTCAGGCCACGGTAGTCTGCGCAAAGTCCAA 297
Query 317 TGGTATCCAGATCCGTATCCGAAGCGGTGGTCATGACAACGAAGGACTTTCTTACGTGTC 376
|||||||||| ||||||| |||||||| ||||||||| ||||||| ||||||||| ||||
Sbjct 298 TGGTATCCAGCTCCGTATACGAAGCGGCGGTCATGACTACGAAGGCCTTTCTTACATGTC 357
Query 377 GTCTGTGCCATTTGTCATTCTTGATATGCACAAACTGAGGGATATTACTGTCGACGTGTC 436
||||||||||||||| ||||| |||||| |||| |||||| ||||||||| ||||||||
Sbjct 358 GTCTGTGCCATTTGTTATTCTCGATATGTACAATCTGAGGTCTATTACTGTTGACGTGTC 417
Query 437 AAGCAAGAAAGCATGGGTCCAAGCTGGTGCGACCTTGGGAGAGCTCTACGTGAAGATCGA 496
|||||||||||| ||||| |||||||||||||||||||||||||||||| ||| || |
Sbjct 418 AAGCAAGAAAGCGTGGGTTCAAGCTGGTGCGACCTTGGGAGAGCTCTACACAAAGGTCAA 477
Query 497 TGAGGCAAGCCAAACGTTAGCGTTCCCTGCTGGCATTTGCGCTACGGTAGGAGCTGGAGG 556
||| | ||||||||| |||| ||||| |||||| |||||||||| ||||||||||| ||
Sbjct 478 TGACGTAAGCCAAACACTAGCTTTCCCGGCTGGCGTTTGCGCTACCGTAGGAGCTGGTGG 537
Query 557 ACACATAAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAACCACAGTGGATCA 616
|||||||| ||||||||||||||||||||||||||||||| ||||| ||| |||||| |
Sbjct 538 GCACATAAGTGGTGGAGGGTATGGAAATCTGATGAGAAAATACGGAATCACTGTGGATAA 597
Query 617 TGTCATTGATGCTGAATTAGTTGATGTCAACGGCAAGCTCTTGAATCGATC-TACCATGG 675
||||||||||||| || || ||||||||||||| ||||||||||||||| | ||||||||
Sbjct 598 TGTCATTGATGCTCAAATAATTGATGTCAACGGAAAGCTCTTGAATCGA-CTTACCATGG 656
Query 676 GAGAAGATCTCTTTTGGGCGATTCGCGGCGGTGGTGGTGCGAGTTTCGGAGTTATACTCT 735
|||| |||||||||||||||||||| |||||||| |||| ||||||||||||||| ||||
Sbjct 657 GAGAGGATCTCTTTTGGGCGATTCGTGGCGGTGGCGGTGGGAGTTTCGGAGTTATCCTCT 716
Query 736 CTTGGAAAATAAACCTCGTGGAGGTTCCAAAGATCTTTACAGTGTTTCAGGTTAACAAAA 795
|||||||||| |||||||| ||||||||||||||| | ||||| ||| ||||||||||||
Sbjct 717 CTTGGAAAATCAACCTCGTCGAGGTTCCAAAGATCGTGACAGTATTTAAGGTTAACAAAA 776
Query 796 CATTGGAACAAGGAGGCACTGATGTTGTCTACAAGTGGCAGCTTGTCGCTAACAAATTCC 855
|||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct 777 CATTGGAACAAGGAGGCACTGATGTTCTTTACAAGTGGCAGCTTGTCGCTAGCAAATTCC 836
Query 856 CTGATAA-TCTTTTCTTGAGAGCAATGCCTCAGGTAGTAAATGGAACAAAACACGGCGAG 914
|||| || ||||||| ||||||||||||||||||| | |||||||||||||| |||||||
Sbjct 837 CTGA-AAGTCTTTTCGTGAGAGCAATGCCTCAGGTCGCAAATGGAACAAAACGCGGCGAG 895
Query 915 AGAACCATCG-CGATTGTATTCTGGGCTCAGTTCTTGGGTCGAACCGATGAGCTGATGGA 973
|||||||||| | ||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 896 AGAACCATCGTTG-TTGTATTCTATGCTCAGTTTTTGGGTCGAACCGATGAGCTGATGGC 954
Query 974 GATAATGAACCAGAGCTTTCCTGAATTAGGGCTAAGACGTGAAGATTGTCAAGAAATGAG 1033
|||||||||||| | || |||||| ||||||||| || |||||||||||||||||||||
Sbjct 955 GATAATGAACCAAAACTGGCCTGAACTAGGGCTAAAACATGAAGATTGTCAAGAAATGAG 1014
Query 1034 CTGGCTTAACACGACGTTGTTTTGGGCTATG-TTA-CCAGCGGGTACTCCGAAGACCGTC 1091
|||||||||| |||||||||||||||| | | ||| ||||| ||||| |||| || | |
Sbjct 1015 CTGGCTTAACTCGACGTTGTTTTGGGC-A-GATTATCCAGCCGGTACACCGACGAGCATT 1072
Query 1092 CTTCTAGGTAGACC-TACGGA-TCCA-G-TATTCTTT-AAGAGTAAATCGGATTACGTCA 1146
||||||| |||||| | | || |||| | ||| ||| ||||| ||||||||||||||||
Sbjct 1073 CTTCTAGATAGACCGT-C-GAGTCCAGGAGATTTTTTCAAGAGCAAATCGGATTACGTCA 1130
Query 1147 AAAAGCCAATCCCCAAAGAAGGACTGGAGAAGATTTGGAAGACAATGTTGAAATTCAAC- 1205
|||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1131 AAAAACCAATCCCTAAAGAAGGACTGGAGAAGCTTTGGAAGACAATGTTGAAATTCAACA 1190
Query 1206 --AATATTGTGTGGCTGCACTTCAACCCTTACGGTGGAATGATGGATCGGATTCCGT-CA 1262
|||||||||||| |||| |||||||| ||||||||| ||||||| |||||||| | ||
Sbjct 1191 ATAATATTGTGTGGATGCAATTCAACCCATACGGTGGAGTGATGGACCGGATTCC-TGCA 1249
Query 1263 AACGCCACAGCGTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTATACCACA 1322
| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||
Sbjct 1250 ACCGCCACAGCGTTTCCTCACCGGAAAGGAAACTTGTTCAAGATTCAATACTTTACGACA 1309
Query 1323 TGGTTGGACCCAAACGCCACAGAGAGTAACCTGAGT-ATTATGAAGGAGCTCTACGAGGT 1381
||||| || ||||| |||||||||||| ||||||| | ||||||||||| ||||||||
Sbjct 1310 TGGTTTAACGCAAACACCACAGAGAGTAGCCTGAGTCAA-ATGAAGGAGCTTTACGAGGT 1368
Query 1382 TGCAGAACCGTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTACAGAGACATTGA 1441
||| ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct 1369 TGCTGAACCGTACGTGTCAAGTAACCCTAGAGAGGCCTTCTTTAATTACAGAGATATCGA 1428
Query 1442 TATTGGAAGCAATCCAAGCGGTGAGACAGACGTGGATGAGGCTAAGATCTATGGATACAA 1501
| ||||||||||||| || ||||||||| |||| ||||| |||||||||||||||| |||
Sbjct 1429 TGTTGGAAGCAATCCGAGTGGTGAGACAAACGTTGATGAAGCTAAGATCTATGGATCCAA 1488
Query 1502 GTATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAG-AGTGATCCTGAGA 1560
||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1489 GTATTTCTTGGGGAACTTGAAGAGATTGATGGATGTTAAAGCTAAGTA-TGATCCTGAGA 1547
Query 1561 ATTTCTTCAAAAACGAACAGAGTATTCC 1588
|||||||||| ||||||||||| |||||
Sbjct 1548 ATTTCTTCAAGAACGAACAGAGCATTCC 1575
> Ahg472778 jgi|Araly1|472778|fgenesh2_kg.1__2732__AT1G26420.1
Length=1587
Score = 1879 bits (1017), Expect = 0.0
Identities = 1401/1586 (88%), Gaps = 28/1586 (2%)
Strand=Plus/Plus
Query 21 ATGAAAGAAGCACTTTTTGGTTTGTATCTTGTTCTTTTGGTTTCGGGCTTAGAAGCAGCA 80
||||||||||| |||| || ||||| |||||||||||||||||||| ||||||||||||
Sbjct 1 ATGAAAGAAGCCCTTTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGGTTTTAGAAGCAGCA 60
Query 81 GTGACGAAACC-AAATTCTGGAAACTTTATTGAATGCCTTCGGTATCAG-GCTAGTCCGG 138
|| |||||||| ||||| ||| |||| || ||||||||||| |||| | | ||| |||
Sbjct 61 GTAACGAAACCAAAATT-TGGGGACTTCATCGAATGCCTTCGCTATC-GTACAAGTTCGG 118
Query 139 AGAATCCAATCACCGATGCCATCTTTACCGTCGATAACACCACCACCTTCTTGTCTTCTT 198
|||||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||
Sbjct 119 AGAATCCAATCACCAATGCCCTCTCCATCGCCGATAACACCACCACCTTCTTGTCTTCTT 178
Query 199 ACGTGTCATACACGAAAAACACGAGGTTCTCGAA-CCCTAACAACAAAAACCTACTAGCC 257
|| |||| ||||||||||||| ||||| ||| || ||||||| |||||| ||||||||
Sbjct 179 ACTTGTCCTACACGAAAAACAGGAGGTACTC-AAGCCCTAACTTCAAAAAACTACTAGCT 237
Query 258 ATCGTAGTGGCGAAAGATGTATCTCATGTTCAGGCAACGGTGGTCTGCGCAAAGTCCAAT 317
||||||| ||||||| ||||||||||||||||||| || ||||||||||||||| ||||
Sbjct 238 ATCGTAGCGGCGAAACATGTATCTCATGTTCAGGCCACAGTGGTCTGCGCAAAGACCAAC 297
Query 318 GGTATCCAGA-TCCGTATCCGAAGCGGTGGTCATGACAACGAAGGACTTTCTTAC-GTGT 375
||||| || | | |||||||||||||| ||||||||| |||||| ||||||||| | ||
Sbjct 298 GGTATACA-ACTGCGTATCCGAAGCGGCGGTCATGACCTCGAAGGCCTTTCTTACAG-GT 355
Query 376 CGTCTGTGCCATTTGTCATTCTTGATATGCACAAACTGAGGGATATTACTGTCGACGTGT 435
|||||||||||||||||||||| || ||| ||| || || ||||||||| ||||| |
Sbjct 356 CGTCTGTGCCATTTGTCATTCTCGACATGTTCAATCTCAGATCTATTACTGTTGACGTAT 415
Query 436 CAAGCAAGAAAGCATGGGTCCAAGCTGGTGCGACCTTGGGAGAGCTCTACGTGAAGATCG 495
| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct 416 CGAGCAAGAAAGCATGGGTTCAAGCTGGTGCAACCTTGGGAGAGCTCTACGTAAAGATCA 475
Query 496 ATGAGGCAAGCCAAACGTTAGCGTTCCCTGCTGGCATTTGCGCTACGGTAGGAGCT-GGA 554
||||||||||||||||| |||| || || |||||| ||||| |||||||||||| | |||
Sbjct 476 ATGAGGCAAGCCAAACGCTAGCATTTCCAGCTGGCGTTTGCCCTACGGTAGGAG-TAGGA 534
Query 555 GGACACATAAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAACCACAGTGGAT 614
|| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 535 GGGCACATTAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAATTACAGTGGAT 594
Query 615 CATGTCATTGATGCTGAATTAGTTGATGTCAACGGCAAGCTCTTGAATCGATCTACCATG 674
||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||
Sbjct 595 CATGTCATTGATGCTCAATTAATTGATGTCAACGGCAAGCTCTTAAATCGAGCTACCATG 654
Query 675 GGAGAAGATCTCTTTTGGGCGATTCGCGGCGGTGGTGGTGCGAGTTTCGGAGTTATACTC 734
|||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||| |||
Sbjct 655 GGAGAAGATCTCTTTTGGGCCATTCGAGGCGGCGGTGGTGCGAGTTTTGGAGTTATCCTC 714
Query 735 TCTTGGAAAATAAACCTCGTGGAGGTTCCAAAGATCTTTACAGTGTTTCAGGTTAACAAA 794
||||||||||| |||||||| || |||||||||||| | ||||| ||| ||||||| |||
Sbjct 715 TCTTGGAAAATCAACCTCGTCGAAGTTCCAAAGATCCTGACAGTTTTTAAGGTTAATAAA 774
Query 795 ACATTGGAACAAGGAGGCACTGATGTTGTCTACAAGTGGCAGCTTGTCGCTAACAAATTC 854
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 775 ACATTGGAACAAGGAGGCACTGATGTTCTCTACAAGTGGCAGCTTGTCGCTACCAAATTC 834
Query 855 CCTGATAATCTTTTCT-TGAGAGCAAT-GCCTCAGGTAGTAAATGGAACAAAACACGGCG 912
|||||| ||||||| | ||||||| || ||||||| | |||||||||||| ||| ||||
Sbjct 835 CCTGATGATCTTTT-TATGAGAGC-ATGGCCTCAGATCGTAAATGGAACAGAACGTGGCG 892
Query 913 AGAGAACCATCGCGA-TTGTATTCTGGGCTCAGTTCTTGGGTCGAACCGATGAGCTGATG 971
||||||||||||| | ||||||||| |||||||||||||||| | | ||| ||||||||
Sbjct 893 AGAGAACCATCGC-AGTTGTATTCTATGCTCAGTTCTTGGGTCCAGCTGATAAGCTGATG 951
Query 972 GAGATAATGAACCAGAGCTTTCCTGAATTAGGGCTAAGACGTGAAGATTGTCAAGAAATG 1031
| ||||||||||||||| || |||||||||||||||| ||||||||||||||| ||||||
Sbjct 952 GCGATAATGAACCAGAGATTGCCTGAATTAGGGCTAAAACGTGAAGATTGTCACGAAATG 1011
Query 1032 AGCTGGCTTAACACGACGTTGTTTTGGGCTATG-TTA-CCAGCGGGTACTCCGAAGACCG 1089
|||||| |||||||||| ||||||||||| || ||| || | ||| || ||||||| ||
Sbjct 1012 AGCTGGTTTAACACGACATTGTTTTGGGC--TGATTACCCGGTGGGAACACCGAAGAGCG 1069
Query 1090 TCCTTCTAGGTAGACCTACGGATCCAGTATTCTTTAAGAGTAAATCGGATTACGTCAAAA 1149
| ||||||| ||| || ||| |||||| |||||||||||| ||||| |||||||| ||||
Sbjct 1070 TTCTTCTAGATAGGCCGACGAATCCAGGATTCTTTAAGAGCAAATCAGATTACGTTAAAA 1129
Query 1150 -AGCCAATCCCCAAAGAAGGACTGGAGAAGATTTGGAAGACAATGTTGAAATTCAACAAT 1208
| |||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||
Sbjct 1130 CA-CCAATCCCAAAAGAAGGACTAGAGAAGCTTTGGAAGACAATGTTTAAATTCAACAAT 1188
Query 1209 ATTGTGTGGCTGCACTTCAACCCTTACGGTGGAATGATGGATCGGATTCCGTCA-AAC-G 1266
||||||||| |||| ||||| ||||||||||| ||||||| |||||||| | | ||| |
Sbjct 1189 ATTGTGTGGATGCAATTCAATGCTTACGGTGGAGTGATGGACCGGATTCC-T-ACAACTG 1246
Query 1267 CCACAGCGTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTATACCACATGGT 1326
|||||||||||||||| || ||||||||| |||||||||||||||||| ||| || ||||
Sbjct 1247 CCACAGCGTTTCCTCATCGTAAAGGAAACATGTTCAAGGTTCAATACTCTACGACGTGGT 1306
Query 1327 TGGACCCAAACGCCACAGAGAGTAACCTGAGTATTATGAAGGAGCTCTACGAGGTTGCAG 1386
|||| ||||||||||||||| || ||| ||||| ||||||||||| ||||||||||| |
Sbjct 1307 TGGATGCAAACGCCACAGAGACTAGCCTAAGTATGATGAAGGAGCTTTACGAGGTTGCGG 1366
Query 1387 AACCGTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTACAGAGACATTGATATTG 1446
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1367 AACCGTACGTGTCAAGTAACCCAAGAGAGGCCTTCTTTAATTACAGAGACATCGATATTG 1426
Query 1447 GAAGCAATCCAAGCGGTGAGACAGACGTGGATGAGGCTAAGATCTATGGATACAAGTATT 1506
||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1427 GAAGCAATCCAAGTAGTGAGACAGACGTAGATGAGGCTAAGATCTATGGATACAAGTATT 1486
Query 1507 TCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGAGTGATCCTGAGAATTTCT 1566
|||||||||||||||||||| ||||| | || ||||||||| |||||||||||||||| |
Sbjct 1487 TCTTGGGGAATTTGAAGAGACTGATGCAAGTCAAAGCTAAGTGTGATCCTGAGAATTTTT 1546
Query 1567 TCAAAAACGAACAGAGTATTCCCCCT 1592
|||| ||||| ||||||||||| |||
Sbjct 1547 TCAAGAACGAGCAGAGTATTCCTCCT 1572
> Ahg472779 jgi|Araly1|472779|fgenesh2_kg.1__2733__AT1G26410.1
Length=1738
Score = 1844 bits (998), Expect = 0.0
Identities = 1397/1588 (88%), Gaps = 34/1588 (2%)
Strand=Plus/Plus
Query 18 AAAATGAAAGAAGCACTTTTTGGTTTGTATCTTGTTCTT-TTGGTTTCGGGCTTAGAAGC 76
|||| ||||||| |||| | || ||||| |||||||||| || ||||| ||||||||
Sbjct 77 AAAAAGAAAGAAACACTCTGTGTTTTGTGTCTTGTTCTTCTT-ATTTCGATTTTAGAAGC 135
Query 77 AGCAGTGACGAAACCAAA-TTCTGGAAACTTTATTGAATGCCTTCG-GTATCAGG-CTAG 133
| |||| || |||||||| || |||||| || || |||||||| || | ||| || |||
Sbjct 136 ACCAGTAACAAAACCAAACTT-TGGAAAGTTCATCGAATGCCTACGCG-ATC-GGACTAC 192
Query 134 TCCGGAGAATCCAATCACCGATGCCATCTTTACCGTCGATAACACCACCACCTTCTTGTC 193
||||||||||||||||||||||||| ||| | || ||||||||||||||| ||||||||
Sbjct 193 TCCGGAGAATCCAATCACCGATGCCCTCTCCATCGCCGATAACACCACCACTTTCTTGTC 252
Query 194 TTCTTACGTGTCATACACGAAAAACACGAGGTTCTCGAACCCTAACAACAAAAAC-CTAC 252
||| |||||||||||||||||||| | ||||||||||| ||||||| | ||||| ||||
Sbjct 253 TTCATACGTGTCATACACGAAAAATAAGAGGTTCTCGAGCCCTAACTTC-AAAACACTAC 311
Query 253 TAGCCATCGTAGTGGCGAAAGATGTATCTCATGTTCAGGCAACGGTGGTCTGCGCAAAGT 312
|||||||| ||| ||| ||| ||||||||||||||||||| ||||| ||||||||||| |
Sbjct 312 TAGCCATCATAGCGGCAAAACATGTATCTCATGTTCAGGCCACGGTTGTCTGCGCAAAAT 371
Query 313 CCAATGGTATCCAGATCCGTATCCGAAGCGGTGGTCATGACAACGAAGGACTTTCTTACG 372
|||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct 372 CCAATGGTATCCAGATACGTATCCGAAGCGGTGGTCATGACAACGAGGGTTTTTCTTACA 431
Query 373 TGTCGTCTGTGCCATTTGTCATTCTTGATATGCACAAACTGAGGGATATTACTGTCGACG 432
| ||||||||||||||||||||||| ||||||||||| |||||| ||||| |||| |||
Sbjct 432 TATCGTCTGTGCCATTTGTCATTCTCGATATGCACAATCTGAGGTCTATTAATGTCAACG 491
Query 433 TGTCAAGCAAGAAAGCATGGGTCCAAGCTGGTGCGACCTTGGGAGAGCTCTACGTGAAGA 492
|||| |||||||| |||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct 492 TGTCGAGCAAGAACGCATGGATTCAAGCTGGTGCGACCTTGGGAGAGCTCTACGTAAAGA 551
Query 493 TCGATGAGGCAAGCCAAACGTTAGCGTTCCCTGCTGGCATTTGCGCTACGGTAGGAGCTG 552
|| ||||||||||||||||| |||| || || |||||| | ||| ||||||||||||| |
Sbjct 552 TCAATGAGGCAAGCCAAACGCTAGCATTTCCGGCTGGCGTGTGCCCTACGGTAGGAGCAG 611
Query 553 GAGGACACATAAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAACCACAGTGG 612
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 612 GAGGACACATAAGCGGTGGAGGGTTTGGAAATCTGATGAGAAAATTCGGAATCACAGTGG 671
Query 613 ATCATGTCATTGATGCTGAATTAGTTGATGTCAACGGCAAGCTCTTGAATCGATCTACCA 672
||||||||||||| ||| ||||| |||||||||| || |||||||| |||||| || |||
Sbjct 672 ATCATGTCATTGACGCTCAATTAATTGATGTCAAGGGTAAGCTCTTAAATCGAGCTGCCA 731
Query 673 TGGGAGAAGATCTCTTTTGGGCGATTCGCGGCGGTGGTGGTGCGAGTTTCGGAGTTATAC 732
|||||||||||||||||||||||||| | ||||||||||| | ||||| |||||||| |
Sbjct 732 TGGGAGAAGATCTCTTTTGGGCGATT--C-GCGGTGGTGGTTCAAGTTTTGGAGTTATCC 788
Query 733 TCTCTTGGAAAATAAACCTCGTGGAGGTTCCAAAGATCTTTACAGTGTTTC-AGGTTAAC 791
||||||||||||| |||||||||||||||||||||||| | |||||| ||| ||||||||
Sbjct 789 TCTCTTGGAAAATCAACCTCGTGGAGGTTCCAAAGATCCTGACAGTG-TTCAAGGTTAAC 847
Query 792 AAAACATTGGAACAAGGAGGCACTGATGTTGTCTACAAGTGGCAGCTTGTCGCTAACAAA 851
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 848 AAAACATTGGAACAAGGAGGCACTGATGTTCTCTACAAGTGGCAGCTTGTCGCTAACAAA 907
Query 852 TTCCCTGATAATCTTTTCTTGAGAGCAAT-GCCTCAGG-TAGTAAATGGAACAAAACAC- 908
||||||||| ||||||| | | ||| || ||||| || |||||||||| |||||| |
Sbjct 908 CTCCCTGATAGTCTTTTCATAACAGC-ATGGCCTC-GGACAGTAAATGGACCAAAAC-CG 964
Query 909 GGCGAGAGAACCATCGCGATTGTATTCTGGGCTCAGTTCTTGGGTCGAACCGATGAGCTG 968
|||||||||||||||||| ||||||||| |||||||||||||||| ||| ||| |||||
Sbjct 965 GGCGAGAGAACCATCGCGGTTGTATTCTATGCTCAGTTCTTGGGTCCAACAGATAAGCTG 1024
Query 969 ATGGAGATAATGAACCAGAGCTTTCCTGAATTAGGGCTAAGACGTGAAGATTGTCAAGAA 1028
|||||||||||| |||||||||| |||||||||| |||||| |||||||||||||| |||
Sbjct 1025 ATGGAGATAATGGACCAGAGCTTCCCTGAATTAGAGCTAAGCCGTGAAGATTGTCACGAA 1084
Query 1029 ATGAGCTGGCTTAACACGACGTTGTTTTGGGCTATGTTACCAG-CGGGTACTCCGAAGAC 1087
||||||||| |||||||||||||||||||||| | ||||| | ||||||| | ||||
Sbjct 1085 ATGAGCTGGATTAACACGACGTTGTTTTGGGCCA-ATTACCCGACGGGTACGGCAAAGAG 1143
Query 1088 CGTCCTTCTAGGTAGACCT---ACGGATCCAGTATTCTTTAAGAGTAAATCGGATTACGT 1144
||||||||||| ||| ||| || || |||| | ||| |||||||||||||||| ||
Sbjct 1144 CGTCCTTCTAGATAGGCCTCCGACAAATTCAGTGTCCTTCAAGAGTAAATCGGATTTTGT 1203
Query 1145 CAAA-AAGCCAATCCCCAAAGAAGGACTGGAGAAGATTTGGAAGACAATGTTGAAATTCA 1203
|||| || |||||||||||| ||||| | |||||| |||||||||||||||| |||||||
Sbjct 1204 CAAAGAA-CCAATCCCCAAAAAAGGATTAGAGAAGCTTTGGAAGACAATGTTTAAATTCA 1262
Query 1204 ACAATATTGTGTGGCTGCACTTCAACCCTTACGGTGGAATGATGGATCGGATTCCGTCAA 1263
||| || ||| | | |||| |||||||||||||||||| | ||||| | ||||||| | |
Sbjct 1263 ACAGTAGTGTCTCGTTGCAATTCAACCCTTACGGTGGAGTAATGGACCAGATTCCGGC-A 1321
Query 1264 AC-GCCACAGCGTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTATACCACA 1322
|| ||||| || |||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 1322 ACGGCCACTGCCTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTCTACGATG 1381
Query 1323 TGGTTGGACCCAAACGCCACAGAGAGTAACCTGAG-TATTATGAAGGAGCTCTACGAGGT 1381
||||| ||| |||||||||||||||||| |||| | ||| ||||||||||| | ||||||
Sbjct 1382 TGGTTTGACGCAAACGCCACAGAGAGTAGCCTG-GCTATGATGAAGGAGCTTTTCGAGGT 1440
Query 1382 TGCAGAACCGTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTACAGAGACATTGA 1441
||| |||||||||||||||||||||||||||||||| |||||||||| |||||| | ||
Sbjct 1441 TGCGGAACCGTACGTGTCAAGTAACCCGAGAGAGGCTTTCTTTAATTTCAGAGATGTCGA 1500
Query 1442 TATTGGAAGCAATCCAAGCGGTGAGACAGACGTGGATGAGGCTAAGATCTATGGATACAA 1501
||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 1501 TATTGGAAGCAGTCCAAGTGGTGAGACAAACGTGGATGAGGCTAAGATCTATGGATACAA 1560
Query 1502 GTATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAG-AGTGATCCTGAGA 1560
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1561 GTATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTA-TGATCCTGAGA 1619
Query 1561 ATTTCTTCAAAAACGAACAGAGTATTCC 1588
||||||| || ||||| |||||||||||
Sbjct 1620 ATTTCTTTAAGAACGAGCAGAGTATTCC 1647
> Ahg912411 jgi|Araly1|912411|Al_scaffold_0001_2665
Length=1368
Score = 821 bits (444), Expect = 0.0
Identities = 655/754 (87%), Gaps = 25/754 (3%)
Strand=Plus/Plus
Query 466 CGACCTTGGGAGAGCTCTACGTGAAGATCGATGAGGCAAGCCAAACGTTAGCGTTCCCTG 525
|||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||
Sbjct 356 CGACCTTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAACGTTAGCGTTCCCTG 415
Query 526 CTGGCATTTGCGCTACGGTAGGAGCT-GGAGGACACATAAGCGGTGGAGGGTATGGAAAT 584
||||| ||||| |||||||||||| | || || ||||||||||||||||| | |||||||
Sbjct 416 CTGGCGTTTGCCCTACGGTAGGAG-TGGGTGGGCACATAAGCGGTGGAGGATTTGGAAAT 474
Query 585 CTGATGAGAAAATTCGGAACCACAGTGGATCATGTCATTGATGCTGAATTAGTTGA-TGT 643
|||||| |||||||||||| ||||||||||||||| ||||||||| | ||| || | ||
Sbjct 475 CTGATGCGAAAATTCGGAATCACAGTGGATCATGTTATTGATGCTCAGTTAATTAACTG- 533
Query 644 CAACGGCAAGCTCTTGA-ATCGATCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGCG 702
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 534 CAACGGCAAGCTCTT-AGATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGCG 592
Query 703 GCGGTGGTGGTGCGAGTTTCGGAGTTATACTCTCTTGGAAAATAAACCTCGTGGAGGTTC 762
|||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||
Sbjct 593 GCGGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTTC 652
Query 763 CAAAGAT-CTTTACAGTGTTTCAGGTTAACAAAACATTGGAACAAGGAGGCACTGATGTT 821
||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 653 CAAAGATTCTG-ACAGTGTTTAAGGTTCGTAAAACATTGGAACAAGGAGGCACTGATGTT 711
Query 822 GTCTACAAGTGGCAGCTTGTCGCTAACAAATTCCCTGATA-ATCTTTTCTTGAGAGCAAT 880
||||||||||||||||||| ||| |||||| ||||| | |||||||| | ||||| |
Sbjct 712 CTCTACAAGTGGCAGCTTGTTGCTTCCAAATTTCCTGA-AGATCTTTTCATAAGAGCC-T 769
Query 881 G-CCTCAGGTAGTAAATGGAACAAAACACGGCGAGAGAACCATCGCGATTGTATTCTGGG 939
| |||||| | ||||| |||||||||| |||| |||||||||||||| ||||||||| |
Sbjct 770 GGCCTCAGATTGTAAAGGGAACAAAACTCGGCAAGAGAACCATCGCGGTTGTATTCTTTG 829
Query 940 CTCAGTTCTTGGGTCGAACCGATGAGCTGATGGAGATAATGAACCAGAGCTTTCCTGAAT 999
||||||| ||||||| ||||||| ||||||||| |||||||| ||||||||| ||||||
Sbjct 830 CTCAGTTTTTGGGTCCAACCGATAAGCTGATGGCGATAATGAGCCAGAGCTTGCCTGAAC 889
Query 1000 TAGGGCTAAGACGTGAAGATTGTCAAGAAATGAGCTGGCTTAACACGACGTTGTTTTGGG 1059
|||||||||||||||| |||||||| |||||||||||| || |||| |||||||||||||
Sbjct 890 TAGGGCTAAGACGTGATGATTGTCACGAAATGAGCTGGTTTTACACAACGTTGTTTTGGG 949
Query 1060 CTATGTTA-CCAGCGGGTACTCCGAAGAC-CGTCCTTCTAGGTAGACC-TACG-GATCCA 1115
| | ||| || | || || || ||| | ||| ||||||| |||||| | || | ||||
Sbjct 950 CCAA-TTATCCGGTTGGCACACCAAAG-CGCGTTCTTCTAGATAGACCGT-CGAG-TCCA 1005
Query 1116 GTA---TTCTTT-AAGAGTAAATCGGATTACGTCAAAAAGCCAATCCCCAAAGAAGGACT 1171
| | || ||| ||||| ||||||||| || ||||||| |||||||| ||||| ||| |
Sbjct 1006 GGAGAATT-TTTCAAGAGCAAATCGGATAACATCAAAAAACCAATCCCAAAAGAGGGATT 1064
Query 1172 GGAGAAGATTTGGAAGACAATGTTGAAATTCAAC 1205
|||||||||||||||||||||||||||||| |||
Sbjct 1065 GGAGAAGATTTGGAAGACAATGTTGAAATTTAAC 1098
Score = 379 bits (205), Expect = 3e-104
Identities = 309/358 (86%), Gaps = 11/358 (3%)
Strand=Plus/Plus
Query 21 ATGAAAGAAGCACTTTTTGGTTTGTATCTTGTTCTTTTGGTTTCGGGCTTAGAAGCAGCA 80
||||||| | |||| | || ||||| |||||||||||||||||||| ||||||||||||
Sbjct 1 ATGAAAGCATCACTCTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGGTTTTAGAAGCAGCA 60
Query 81 GT---GACGAAACCAAATTCTGGAAACTTT-ATTGAATGCCTTCGGTATCAGG-CTAGTC 135
|| || |||||||||||||| || ||| || | ||||||||| ||| || ||||||
Sbjct 61 GTAACAACAAAACCAAATTCTGG-AATTTTCATCGGATGCCTTCGCAATC-GGACTAGTC 118
Query 136 CGGAGAATCCAATCACCGATGCCATCTTTACCGTCGATAACACCACCACCTTCTTGTCTT 195
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 119 CGGAGAATCCAATCACCGATGCCATCTTCACCGCCGATAACACCACCACCTTCTTGTCTT 178
Query 196 CTTACGTGTCATACACGAAAAACACGAGGTTCTCGAACCCTAACAAC-AAAAACCTACTA 254
|||||||||| ||||||| ||||| ||||| ||||| ||||||| || |||||| || ||
Sbjct 179 CTTACGTGTCCTACACGAGAAACAAGAGGTACTCGAGCCCTAACTACCAAAAAC-TAATA 237
Query 255 GCCATCGTAGTGGCGAAAGATGTATCTCATGTTCAGGCAACGGTGGTCTGCGCAAAGTCC 314
|||||||||| ||| ||| ||||||||||||||||||| || ||| |||||||||| ||
Sbjct 238 GCCATCGTAGCGGCAAAACATGTATCTCATGTTCAGGCCACTGTGATCTGCGCAAAAACC 297
Query 315 AATGGTATCCAGA-TCCGTATCCGAAGCGGTGGTCATGACAACGAAGGACTTTCTTAC 371
|| ||||| || | |||||||||||||||| ||||||||| ||||||| || ||||||
Sbjct 298 AACGGTATTCA-ACTCCGTATCCGAAGCGGAGGTCATGACTACGAAGGCCTCTCTTAC 354
Score = 307 bits (166), Expect = 2e-82
Identities = 221/247 (89%), Gaps = 5/247 (2%)
Strand=Plus/Plus
Query 1341 ACAGAGAGTAACCTGAGTATTATGAAGGAGCTCTACGAGGTTGCAGAACCGTACGTGTCA 1400
||||||| ||| ||| ||| ||||||||||| ||||| ||||| | |||||||||||||
Sbjct 1105 ACAGAGAATAAGATGACTATGATGAAGGAGCTTTACGAAGTTGCGGGACCGTACGTGTCA 1164
Query 1401 AGTAACCCGAGAGAGGC-CTTCTTTAATTACAGAGACATTGATATTGGAAGCAATCCAAG 1459
||||||||||||||||| | |||| |||| ||||||| | ||||||||||||||||| ||
Sbjct 1165 AGTAACCCGAGAGAGGCGC-TCTTAAATTTCAGAGACGTCGATATTGGAAGCAATCCGAG 1223
Query 1460 CGGTGAGACAGACGTGGATGAGGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTT 1519
|||| | | |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1224 TGGTGTG--A-ACGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTT 1280
Query 1520 GAAGAGATTGATGGATGTTAAAGCTAAGAGTGATCCTGAGAATTTCTTCAAAAACGAACA 1579
||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1281 AAAGAGATTGATGGATATTAAAGCTAAGTGTGATGCTGAGAATTTCTTCAAAAACGAACA 1340
Query 1580 GAGTATT 1586
|||||||
Sbjct 1341 GAGTATT 1347
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67267372670
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5