BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G26400.1
Length=1584
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472778 jgi|Araly1|472778|fgenesh2_kg.1__2732__AT1G26420.1 1797 0.0
Ahg472780 jgi|Araly1|472780|fgenesh2_kg.1__2734__AT1G26390.1 1770 0.0
Ahg472781 jgi|Araly1|472781|fgenesh2_kg.1__2735__AT1G26380.1 1716 0.0
Ahg472779 jgi|Araly1|472779|fgenesh2_kg.1__2733__AT1G26410.1 1657 0.0
Ahg912411 jgi|Araly1|912411|Al_scaffold_0001_2665 1147 0.0
> Ahg472778 jgi|Araly1|472778|fgenesh2_kg.1__2732__AT1G26420.1
Length=1587
Score = 1797 bits (973), Expect = 0.0
Identities = 1390/1589 (87%), Gaps = 37/1589 (2%)
Strand=Plus/Plus
Query 16 TCTGTTTTGTGTCTTGTTCTTTTGGTTTCGATTTTAAG-AGCAGCAGTGACAAAACC-AG 73
|||||||||||||||||||||||||||||| |||| || ||||||||| || ||||| |
Sbjct 16 TCTGTTTTGTGTCTTGTTCTTTTGGTTTCGGTTTT-AGAAGCAGCAGTAACGAAACCAAA 74
Query 74 ATTCCGGAATCTTCACCGGATGCCTTCGCAATCGGACTAG-TCTGGAGAATCCAATCACC 132
||| || | ||||| || |||||||||| |||| || || || ||||||||||||||||
Sbjct 75 ATTTGGGGA-CTTCATCGAATGCCTTCGCTATCGTACAAGTTC-GGAGAATCCAATCACC 132
Query 133 GATGCCATCTTCACCTC-CCG-TAACACCACCACCTTCTTGTCTTCTTACGTGTCCTACA 190
||||| || || | || ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 133 AATGCCCTC-TC-CATCGCCGATAACACCACCACCTTCTTGTCTTCTTACTTGTCCTACA 190
Query 191 CGAAAAACAAGAGGTACTCGAGCCTTAACTACCAGAAATTAGTAGCCATCGTGGCGGCTA 250
||||||||| ||||||||| |||| ||||| | | ||| || |||| ||||| ||||| |
Sbjct 191 CGAAAAACAGGAGGTACTCAAGCCCTAACTTCAAAAAACTACTAGCTATCGTAGCGGCGA 250
Query 251 AACATGTATCGCATGTTCAGGCCACGGTGGTCTGCGCAAAGGCTAACGGTATACAACTCC 310
|||||||||| |||||||||||||| ||||||||||||||| | |||||||||||||| |
Sbjct 251 AACATGTATCTCATGTTCAGGCCACAGTGGTCTGCGCAAAGACCAACGGTATACAACTGC 310
Query 311 GTATCCGTAGTGGAGGTCATGA-CTACGAAGGCCTTTCTTACACATCGTCTGTGCCATTT 369
||||||| || || |||||||| || ||||||||||||||||| |||||||||||||||
Sbjct 311 GTATCCGAAGCGGCGGTCATGACCT-CGAAGGCCTTTCTTACAGGTCGTCTGTGCCATTT 369
Query 370 GTTATCCTCGATATGTACAATTTGAGGTCTATTACTGTTGACGTGTCAAGCAAGAAAGCA 429
|| || ||||| |||| |||| | || ||||||||||||||||| || ||||||||||||
Sbjct 370 GTCATTCTCGACATGTTCAATCTCAGATCTATTACTGTTGACGTATCGAGCAAGAAAGCA 429
Query 430 TGGGTTCAAGCTGGTGCGACATTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAA 489
||||||||||||||||| || ||||||||||||||| ||||||||||||||| ||||||
Sbjct 430 TGGGTTCAAGCTGGTGCAACCTTGGGAGAGCTCTACGTAAAGATCAATGAGGCAAGCCAA 489
Query 490 ACGTTAGCGTTCCCGGCTGGCGTTTGCCCTACGGTAGGAGTGGGTGGGCACATAACCGGT 549
||| |||| || || |||||||||||||||||||||||||| || |||||||| | ||||
Sbjct 490 ACGCTAGCATTTCCAGCTGGCGTTTGCCCTACGGTAGGAGTAGGAGGGCACATTAGCGGT 549
Query 550 GGAGGATTTGGAAATCTGATGAGAAAATTCGGAATCACAGTGGATCATGTCATTGATGCT 609
||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 550 GGAGGGTATGGAAATCTGATGAGAAAATTCGGAATTACAGTGGATCATGTCATTGATGCT 609
Query 610 CAGTTAATTGGTGTCAACGGAAAGCTCTTGGATCGAGCTACCATGGGAGAAGATCTCTTT 669
|| ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 610 CAATTAATTGATGTCAACGGCAAGCTCTTAAATCGAGCTACCATGGGAGAAGATCTCTTT 669
Query 670 TGGGCCATTCGTGGCGGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAAC 729
||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 670 TGGGCCATTCGAGGCGGCGGTGGTGCGAGTTTTGGAGTTATCCTCTCTTGGAAAATCAAC 729
Query 730 CTCGTCGAGGTTCCAAAGATCCTGACAGTGTTTAAGGTTAGCAAAACATTGGAACAAGGA 789
|||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 730 CTCGTCGAAGTTCCAAAGATCCTGACAGTTTTTAAGGTTAATAAAACATTGGAACAAGGA 789
Query 790 GGTACTGATGTTCTCTACAAGTGGCAGCTTGTTGCTACCAAAGTTCC-TGAAGATCTTTT 848
|| ||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||
Sbjct 790 GGCACTGATGTTCTCTACAAGTGGCAGCTTGTCGCTACCAAA-TTCCCTGATGATCTTTT 848
Query 849 CATAAGAGCCTGGCCTCAGATTGTAAAAGGAACAAAAC-TCGGCGAGAGAACCATTGGGG 907
|| ||||| ||||||||||| ||||| |||||| ||| | |||||||||||||| | |
Sbjct 849 TATGAGAGCATGGCCTCAGATCGTAAATGGAACAGAACGT-GGCGAGAGAACCATCGCAG 907
Query 908 TTGTATTTTTTGCTCAGTTTTTGGGTCCAACCGATAAGCTGATGGAGATAATGAGCCAAA 967
||||||| | ||||||||| ||||||||| | ||||||||||||| |||||||| ||| |
Sbjct 908 TTGTATTCTATGCTCAGTTCTTGGGTCCAGCTGATAAGCTGATGGCGATAATGAACCAGA 967
Query 968 GCTTGCCTGAATTAGGGCTAAGACGTGAAGATTGTCATGAAATGAGCTGGTTTAACACGA 1027
| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 968 GATTGCCTGAATTAGGGCTAAAACGTGAAGATTGTCACGAAATGAGCTGGTTTAACACGA 1027
Query 1028 CGTTGTTTTGGGCCAATTATCCTGTAGGTACACC-AACACGCGTTCTTCTAGATAGACCG 1086
| ||||||||||| |||| || || || ||||| || | |||||||||||||||| |||
Sbjct 1028 CATTGTTTTGGGCTGATTACCCGGTGGGAACACCGAAGA-GCGTTCTTCTAGATAGGCCG 1086
Query 1087 TCGACTCCAGGAGAATT-TTTCAAGAGCAAGTCAGATAACATaaaaaaaCCAATCCCAAA 1145
||| ||||||| || ||| |||||||| |||||| || | |||| ||||||||||||
Sbjct 1087 ACGAATCCAGGA---TTCTTT-AAGAGCAAATCAGATTACGTTAAAACACCAATCCCAAA 1142
Query 1146 AGAAGGATTGGAGAAGATATGGAAGACAATGTTGAAATTTAAC--T-TTGTATGGATTG- 1201
||||||| | |||||| | |||||||||||||| ||||| ||| | |||| ||||| |
Sbjct 1143 AGAAGGACTAGAGAAGCTTTGGAAGACAATGTTTAAATTCAACAATATTGTGTGGAT-GC 1201
Query 1202 AATTCAACCCTTACGGTGGAGTGATGGATCGGATTCC-AGCTACTGCCACAGCGTTTCCT 1260
||||||| ||||||||||||||||||| |||||||| | | ||||||||||||||||||
Sbjct 1202 AATTCAATGCTTACGGTGGAGTGATGGACCGGATTCCTA-CAACTGCCACAGCGTTTCCT 1260
Query 1261 CACCGGAAAGGAAACTTGTTCAATCTTCAATACTCTACGATATGGTTGGACGCAAAGGAA 1320
|| || ||||||||| ||||||| ||||||||||||||| |||||||| ||||| |
Sbjct 1261 CATCGTAAAGGAAACATGTTCAAGGTTCAATACTCTACGACGTGGTTGGATGCAAACGCC 1320
Query 1321 ACAGAGAATAAGC-TGACTATGATGAAGGAGCTTTATGAAGTTGCGGGACCTTACGTGTC 1379
||||||| || || | | |||||||||||||||||| || ||||||| ||| ||||||||
Sbjct 1321 ACAGAGACTA-GCCTAAGTATGATGAAGGAGCTTTACGAGGTTGCGGAACCGTACGTGTC 1379
Query 1380 AAGTAACCCGAGAGAGGCGCT-CTTTAATTTCAGAGACTTCGATATTGGAATCAATCCGA 1438
||||||||| |||||||| || |||||||| ||||||| |||||||||||| |||||| |
Sbjct 1380 AAGTAACCCAAGAGAGGC-CTTCTTTAATTACAGAGACATCGATATTGGAAGCAATCCAA 1438
Query 1439 GTGGTTTGA-A--CGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATT 1495
|| || || | ||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1439 GTAGTGAGACAGACGTAGATGAGGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATT 1498
Query 1496 TAAAGAGATTGATGGATGTTAAAGCTAAGTGTGATCCTGATAATTTCTTCAAGAACGAGC 1555
| |||||| ||||| | || |||||||||||||||||||| ||||| |||||||||||||
Sbjct 1499 TGAAGAGACTGATGCAAGTCAAAGCTAAGTGTGATCCTGAGAATTTTTTCAAGAACGAGC 1558
Query 1556 AGAGTATTCTTCCTGCTCGCGTAATGTAG 1584
||||||||| ||||| ||| |||||||||
Sbjct 1559 AGAGTATTCCTCCTGTTCGTGTAATGTAG 1587
> Ahg472780 jgi|Araly1|472780|fgenesh2_kg.1__2734__AT1G26390.1
Length=1653
Score = 1770 bits (958), Expect = 0.0
Identities = 1391/1596 (87%), Gaps = 45/1596 (3%)
Strand=Plus/Plus
Query 16 TCTGTTTTGTGTCTTGTTCTTTTGGTTTCGATTTTAAG-AGCAGCAGTGACAAAACC-AG 73
||||||||||||||||| ||| |||||||| |||| || ||||||||| || ||||| |
Sbjct 17 TCTGTTTTGTGTCTTGTACTTCTGGTTTCGGTTTT-AGAAGCAGCAGTAACGAAACCAAA 75
Query 74 ATTCCGGAA-TCTTCACCGGATGCCTTCGCAATCGGACTAGTCTGGAGAATCCAATCACC 132
||| ||| ||||| ||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct 76 ATT--TGAAGACTTCATCGGATGCCTTCGCTATCGTACTAGTCCGGAGAATCCAATCACC 133
Query 133 GATGCCATCTTCACCTC-CCG-TAACACCACCACCTTCTTGTCTTCTTACGTGTCCTACA 190
||||||||| || | || ||| |||||||||| |||||||||| |||||||| |||||||
Sbjct 134 GATGCCATC-TC-CATCGCCGATAACACCACCGCCTTCTTGTCCTCTTACGTATCCTACA 191
Query 191 CGAAAAACAAGAGGTACTCGAGCCTTAACTACCAGAAATTAGTAGCCATCGTGGCGGCTA 250
|||||||||| |||| || ||||| ||| || | ||| || ||||||| ||||| || |
Sbjct 192 CGAAAAACAAAAGGTTCTTGAGCCCTAATTATAAAAAACTACTAGCCATAGTGGCCGCAA 251
Query 251 AACATGTATCGCATGTTCAGGCCACGGTGGTCTGCGCAAAGGCTAACGGTATACAACTCC 310
|||||| ||| ||||||||||||||||| |||||||||||| | || ||||| || ||||
Sbjct 252 AACATGCATCTCATGTTCAGGCCACGGTAGTCTGCGCAAAGTCCAATGGTATCCAGCTCC 311
Query 311 GTATCCGTAGTGGAGGTCATGACTACGAAGGCCTTTCTTACACATCGTCTGTGCCATTTG 370
|||| || || || |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 312 GTATACGAAGCGGCGGTCATGACTACGAAGGCCTTTCTTACATGTCGTCTGTGCCATTTG 371
Query 371 TTATCCTCGATATGTACAATTTGAGGTCTATTACTGTTGACGTGTCAAGCAAGAAAGCAT 430
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 372 TTATTCTCGATATGTACAATCTGAGGTCTATTACTGTTGACGTGTCAAGCAAGAAAGCGT 431
Query 431 GGGTTCAAGCTGGTGCGACATTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAA 490
||||||||||||||||||| ||||||||||||||||||||| ||||||| | |||||||
Sbjct 432 GGGTTCAAGCTGGTGCGACCTTGGGAGAGCTCTACACAAAGGTCAATGACGTAAGCCAAA 491
Query 491 CGTTAGCGTTCCCGGCTGGCGTTTGCCCTACGGTAGGAG-TGGGTGGGCACATAACCGGT 549
| |||| |||||||||||||||||| |||| ||||||| | ||||||||||||| |||
Sbjct 492 CACTAGCTTTCCCGGCTGGCGTTTGCGCTACCGTAGGAGCT-GGTGGGCACATAAGTGGT 550
Query 550 GGAGGATTTGGAAATCTGATGAGAAAATTCGGAATCACAGTGGATCATGTCATTGATGCT 609
||||| | |||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct 551 GGAGGGTATGGAAATCTGATGAGAAAATACGGAATCACTGTGGATAATGTCATTGATGCT 610
Query 610 CAGTTAATTGGTGTCAACGGAAAGCTCTTGGATCGAGC-TACCATGGGAGAAGATCTCTT 668
|| |||||| ||||||||||||||||||| ||||| | |||||||||||| ||||||||
Sbjct 611 CAAATAATTGATGTCAACGGAAAGCTCTTGAATCGA-CTTACCATGGGAGAGGATCTCTT 669
Query 669 TTGGGCCATTCGTGGCGGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAA 728
|||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 670 TTGGGCGATTCGTGGCGGTGGCGGTGGGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAA 729
Query 729 CCTCGTCGAGGTTCCAAAGATCCTGACAGTGTTTAAGGTTAGCAAAACATTGGAACAAGG 788
|||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||
Sbjct 730 CCTCGTCGAGGTTCCAAAGATCGTGACAGTATTTAAGGTTAACAAAACATTGGAACAAGG 789
Query 789 AGGTACTGATGTTCTCTACAAGTGGCAGCTTGTTGCTACCAAAGTTCC-TGAA-GATCTT 846
||| ||||||||||| ||||||||||||||||| |||| |||| |||| |||| | ||||
Sbjct 790 AGGCACTGATGTTCTTTACAAGTGGCAGCTTGTCGCTAGCAAA-TTCCCTGAAAG-TCTT 847
Query 847 TTCATAAGAGCC-TGGCCTCAGATTGTAAAAGGAACAAAACTCGGCGAGAGAACCATTGG 905
||| | ||||| || |||||| | | ||| |||||||||| ||||||||||||||| |
Sbjct 848 TTCGTGAGAGCAATG-CCTCAGGTCGCAAATGGAACAAAACGCGGCGAGAGAACCATCGT 906
Query 906 GGTTGTATTTTTTGCTCAGTTTTTGGGTCCAACCGATAAGCTGATGGAGATAATGAGCCA 965
|||||||| | ||||||||||||||||| ||||||| ||||||||| |||||||| |||
Sbjct 907 TGTTGTATTCTATGCTCAGTTTTTGGGTCGAACCGATGAGCTGATGGCGATAATGAACCA 966
Query 966 AAGCTTGCCTGAATTAGGGCTAAGACGTGAAGATTGTCATGAAATGAGCTGGTTTAACAC 1025
|| || ||||||| ||||||||| || |||||||||||| |||||||||||| ||||| |
Sbjct 967 AAACTGGCCTGAACTAGGGCTAAAACATGAAGATTGTCAAGAAATGAGCTGGCTTAACTC 1026
Query 1026 GACGTTGTTTTGGGCCA-ATTATCCTGTAGGTACACCAAC-ACGCGTTCTTCTAGATAGA 1083
||||||||||||||| | ||||||| | |||||||| || | || ||||||||||||||
Sbjct 1027 GACGTTGTTTTGGGC-AGATTATCCAGCCGGTACACCGACGA-GCATTCTTCTAGATAGA 1084
Query 1084 CCGTCGACTCCAGGAGAATTTTTCAAGAGCAAGTCAGATAACATaaaaaaaCCAATCCCA 1143
||||||| ||||||||| |||||||||||||| || ||| || | ||||||||||||||
Sbjct 1085 CCGTCGAGTCCAGGAGATTTTTTCAAGAGCAAATCGGATTACGTCAAAAAACCAATCCCT 1144
Query 1144 AAAGAAGGATTGGAGAAGATATGGAAGACAATGTTGAAATTTAAC--T--T-T-GTATGG 1197
||||||||| |||||||| | |||||||||||||||||||| ||| | | | || |||
Sbjct 1145 AAAGAAGGACTGGAGAAGCTTTGGAAGACAATGTTGAAATTCAACAATAATATTGTGTGG 1204
Query 1198 ATTG-AATTCAACCCTTACGGTGGAGTGATGGATCGGATTCCAGCTACTGCCACAGCGTT 1256
|| | |||||||||| ||||||||||||||||| |||||||| || || |||||||||||
Sbjct 1205 AT-GCAATTCAACCCATACGGTGGAGTGATGGACCGGATTCCTGCAACCGCCACAGCGTT 1263
Query 1257 TCCTCACCGGAAAGGAAACTTGTTCAATCTTCAATACTCTACGATATGGTTGGACGCAAA 1316
||||||||||||||||||||||||||| ||||||||| ||||| |||||| |||||||
Sbjct 1264 TCCTCACCGGAAAGGAAACTTGTTCAAGATTCAATACTTTACGACATGGTTTAACGCAAA 1323
Query 1317 GGAA-ACAGAGAATAAGC-TGACT-ATGATGAAGGAGCTTTATGAAGTTGCGGGACCTTA 1373
| ||||||| || || ||| | | |||||||||||||| || ||||| | ||| ||
Sbjct 1324 C-ACCACAGAGAGTA-GCCTGAGTCAA-ATGAAGGAGCTTTACGAGGTTGCTGAACCGTA 1380
Query 1374 CGTGTCAAGTAACCCGAGAGAGGCGCT-CTTTAATTTCAGAGACT-TCGATATTGGAATC 1431
||||||||||||||| |||||||| || |||||||| |||||| | ||||| |||||| |
Sbjct 1381 CGTGTCAAGTAACCCTAGAGAGGC-CTTCTTTAATTACAGAGA-TATCGATGTTGGAAGC 1438
Query 1432 AATCCGAGTGGTTTGA-A--CGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTG 1488
|||||||||||| || | ||| |||||||||||||||||||||| |||||||||||||
Sbjct 1439 AATCCGAGTGGTGAGACAAACGTTGATGAAGCTAAGATCTATGGATCCAAGTATTTCTTG 1498
Query 1489 GGGAATTTAAAGAGATTGATGGATGTTAAAGCTAAGTGTGATCCTGATAATTTCTTCAAG 1548
||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 1499 GGGAACTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGAGAATTTCTTCAAG 1558
Query 1549 AACGAGCAGAGTATTCTTCCTGCTCGCGTAATGTAG 1584
||||| ||||| |||| ||| | ||| |||||||||
Sbjct 1559 AACGAACAGAGCATTCCTCCGGTTCGTGTAATGTAG 1594
> Ahg472781 jgi|Araly1|472781|fgenesh2_kg.1__2735__AT1G26380.1
Length=1581
Score = 1716 bits (929), Expect = 0.0
Identities = 1377/1589 (87%), Gaps = 47/1589 (3%)
Strand=Plus/Plus
Query 1 ATGAAAGCATTATTCTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGATTTTAAG-AGCAGC 59
||||||| | ||| | |||||||| ||||||||||||||||||| ||| || ||||
Sbjct 7 ATGAAAGAAGCATTTTATGTTTTGTATCTTGTTCTTTTGGTTTCGGGTTT-AGAAGCATT 65
Query 60 AGTGACAAAACC-AGATTCCGGAATCTTCACCGGATGCCTTCGCAATCGGACTAGTCTGG 118
|||||| ||||| | |||| |||| ||||| || |||||||||| | |||| ||||| ||
Sbjct 66 AGTGACGAAACCTA-ATTCTGGAAACTTCATCGAATGCCTTCGCTACCGGATTAGTCCGG 124
Query 119 AGAATCCAATCACCGATGCCATCTTCACCTCCCG-TAACACCACCACCTTCTTGTCTTCT 177
||||||||||||||||||||||||| | | ||| |||||||||||||||||||||||||
Sbjct 125 AGAATCCAATCACCGATGCCATCTTTA-CAGCCGATAACACCACCACCTTCTTGTCTTCT 183
Query 178 TACGTGTCCTACACGAAAAACAAGAGGTACTCGAGCCTTAACTACCAGAAATTAGTAGCC 237
||| |||| ||||||||||||| ||||| ||||||| |||||| | ||| || |||||
Sbjct 184 TACTTGTCATACACGAAAAACACGAGGTTTTCGAGCCCAAACTACAAAAAACTACTAGCC 243
Query 238 ATCGTGGCGGCTAAACATGTATCGCATGTTCAGGCCACGGTGGTCTGCGCAAAGGCTAAC 297
||||| | ||| || ||||| | ||||||||||| |||||||||||||||||| | ||
Sbjct 244 ATCGTAGTGGCGAATGATGTAGCTCATGTTCAGGCAACGGTGGTCTGCGCAAAGTCCAAT 303
Query 298 GGTATACA-ACTCCGTATCCGTAGTGGAGGTCATGACTACGAAGGCCTTTCTTACACATC 356
||||| || | | || ||||| || || ||||||||| ||||||||||||||||||| ||
Sbjct 304 GGTATCCAGA-TACGAATCCGAAGCGGTGGTCATGACAACGAAGGCCTTTCTTACACGTC 362
Query 357 GTCTGTGCCATTTGTTATCCTCGATATGTACAATTTGAGGTCTATTACTGTTGACGTGTC 416
||||||||||||||| || || |||||| ||||| ||||| |||||||||||||||||||
Sbjct 363 GTCTGTGCCATTTGTCATTCTTGATATGCACAATCTGAGGACTATTACTGTTGACGTGTC 422
Query 417 AAGCAAGAAAGCATGGGTTCAAGCTGGTGCGACATTGGGAGAGCTCTACACAAAGATCAA 476
||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||
Sbjct 423 AAGCAAGAAAGCATGGGTTCAAGCTGGTGCGACCTTGGGAGAGCTGTACGTGAAGATCAA 482
Query 477 TGAGGCGAGCCAAACGTTAGCGTTCCCGGCTGGCGTTTGCCCTACGGTAGGAG-TGGGTG 535
|||||| ||||||||| |||| ||||| |||||| ||||| |||||||||||| | || |
Sbjct 483 TGAGGCAAGCCAAACGCTAGCATTCCCTGCTGGCATTTGCGCTACGGTAGGAGCT-GGAG 541
Query 536 GGCACATAACCGGTGGAGGATTTGGAAATCTGATGAGAAAATTCGGAATCACAGTGGATC 595
| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 542 GACACATAAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAATCACAGTGGATC 601
Query 596 ATGTCATTGATGCTCAGTTAATTGGTGTCAACGGAAAGCTCTTGGATCGAGCTACCATGG 655
|||||||||||||||| ||||||| ||||||||| |||||| || ||||| || ||||||
Sbjct 602 ATGTCATTGATGCTCAATTAATTGATGTCAACGGCAAGCTCCTGAATCGATCTTCCATGG 661
Query 656 GAGAAGATCTCTTTTGGGCCATTCGTGGCGGTGGTGGTGCGAGTTTCGGAGTTATCCTCT 715
||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||
Sbjct 662 GAGAAGATCTCTTTTGGGCGATTCGTGGTGGTGGTGGTGCAAGTTTCGGAGTTATCCTCT 721
Query 716 CTTGGAAAATCAACCTCGTCGAGGTTCCAAAGATCCTGACAGTGTTTAAGGTTAGCAAAA 775
||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||
Sbjct 722 CTTGGAAAATCAAGCTCGTTGAGGTTCCAAAGATCTTGACAGTGTTTAAGGTTAACAAAA 781
Query 776 CATTGGAACAAGGAGGTACTGATGTTCTCTACAAGTGGCAGCTTGTTGCTACCAAAGTTC 835
|||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| |||
Sbjct 782 CATTGGAACAAGGAGGCACTGATGTTCTCTACAAGTGGCAGCTTGTCGCTAACAAA-TTC 840
Query 836 C-TGA-AGATCTTTTCATAAGAGCC-TGGCCTCAGATTGTAAAAGGAACAAAACTCGGCG 892
| ||| | |||||||| | ||||| || |||||| | ||||| |||||||| | ||| |
Sbjct 841 CCTGATA-ATCTTTTCTTGAGAGCAATG-CCTCAGGTCGTAAATGGAACAAATCACGGTG 898
Query 893 AGAGAACCATTGGGGTTGTATTTTTTGCTCAGTTTTTGGGTCCAACCGATAAGCTGATGG 952
|||||||||| | ||||||||| | |||||||| ||||||| ||||||| |||||||||
Sbjct 899 AGAGAACCATCGCGGTTGTATTCTGGGCTCAGTTCTTGGGTCGAACCGATGAGCTGATGG 958
Query 953 -AGATAATGA-GCCAAAGCTTGCCTGAATTAGGGCTAAGACGTGAAGATTGTCATGAAAT 1010
| ||||||| || | ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 959 CA-ATAATGAAGC-AGAGCTTTCCTGAATTAGGGCTAAGACGTGAAGATTGTCAAGAAAT 1016
Query 1011 GAGCTGGTTTAACACGACGTTGTTTTGGGCCAA-TTATCCTGTAGGTACACC-AACACGC 1068
||||||| |||||||||||||||||||||||| ||| || | |||||||| || || |
Sbjct 1017 GAGCTGGCTTAACACGACGTTGTTTTGGGCCATGTTA-CCAGCGGGTACACCGAAGAC-C 1074
Query 1069 GTTCTTCTAGATAGACCGT-CG-ACTCCAGGAGAATT-TTTCAAGAGCAAGTCAGATAAC 1125
|| |||||||||||||| | || | ||||| | || ||| ||||| || || ||| ||
Sbjct 1075 GTCCTTCTAGATAGACC-TACGGA-TCCAGTA---TTCTTT-AAGAGTAAATCGGATTAC 1128
Query 1126 ATaaaaaaaCCAATCCCAAAAGAAGGATTGGAGAAGATATGGAAGACAATGTTGAAATTT 1185
| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1129 GTCAAAAAGCCAATCCCCAAAGAAGGATTGGAGAAGATTTGGAAGACAATGTTGAAATTC 1188
Query 1186 AAC--T-TTGTATGGATTGAA-TTCAACCCTTACGGTGGAGTGATGGATCGGATTCCAGC 1241
||| | |||| ||| | | | |||||||||||||||||| |||||| |||||||| ||
Sbjct 1189 AACAATATTGTGTGGCT-GCACTTCAACCCTTACGGTGGAATGATGGCCCGGATTCCGGC 1247
Query 1242 TA-CTGCCACAGCGTTTCCTCACCGGAAAGGAAACTTGTTCAATCTTCAATACTCTACGA 1300
| | |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
Sbjct 1248 AAAC-GCCACAGCGTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTATACTA 1306
Query 1301 TATGGTTGGACGCAAAGGAAACAGAGAATAAGCT-GACTATGATGAAGGAGCTTTATGAA 1359
|||||||||| |||| | ||||||| ||| || || ||||||||||||||| || ||
Sbjct 1307 CATGGTTGGACCCAAACGCCACAGAGAGTAA-CTTGAGTATGATGAAGGAGCTCTACGAG 1365
Query 1360 GTTGCGGGACCTTACGTGTCAAGTAACCCGAGAGAGGCGCT-CTTTAATTTCAGAGACTT 1418
||||| | ||| |||||||||||||||||||||||||| || |||||||| ||||||| |
Sbjct 1366 GTTGCAGAACCGTACGTGTCAAGTAACCCGAGAGAGGC-CTTCTTTAATTACAGAGACAT 1424
Query 1419 CGATATTGGAATCAATCCGAGTGGTTTGA-A--CGTGGATGAAGCTAAGATCTATGGATA 1475
||||||||||| |||||| |||||| || | |||||| || |||||||||||||||||
Sbjct 1425 CGATATTGGAAGCAATCCAAGTGGTGAGACAAACGTGGACGAGGCTAAGATCTATGGATA 1484
Query 1476 CAAGTATTTCTTGGGGAATTTAAAGAGATTGATGGATGTTAAAGCTAAGTGTGATCCTGA 1535
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1485 CAAGTATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGA 1544
Query 1536 TAATTTCTTCAAGAACGAGCAGAGTATTC 1564
||| |||||||||||||||||||||||||
Sbjct 1545 TAACTTCTTCAAGAACGAGCAGAGTATTC 1573
> Ahg472779 jgi|Araly1|472779|fgenesh2_kg.1__2733__AT1G26410.1
Length=1738
Score = 1657 bits (897), Expect = 0.0
Identities = 1374/1599 (86%), Gaps = 53/1599 (3%)
Strand=Plus/Plus
Query 14 TCTCTGTTTTGTGTCTTGTTCTT-TTGGTTTCGATTTTAAG-AGCAGCAGTGACAAAACC 71
||| ||||||||||||||||||| || |||||||||| || |||| |||| ||||||||
Sbjct 93 TCTGTGTTTTGTGTCTTGTTCTTCTT-ATTTCGATTTT-AGAAGCACCAGTAACAAAACC 150
Query 72 AGA-TTCCGGAATCTTCACCGGATGCCTTCGCAATCGGACTAGTCTGGAGAATCCAATCA 130
| | || |||| |||| || |||||| ||| ||||||||| || ||||||||||||||
Sbjct 151 AAACTT-TGGAAAGTTCATCGAATGCCTACGCGATCGGACTACTCCGGAGAATCCAATCA 209
Query 131 CCGATGCCATCTTCACCTC-CCG-TAACACCACCACCTTCTTGTCTTCTTACGTGTCCTA 188
|||||||| || || | || ||| |||||||||||| ||||||||||| |||||||| ||
Sbjct 210 CCGATGCCCTC-TC-CATCGCCGATAACACCACCACTTTCTTGTCTTCATACGTGTCATA 267
Query 189 CACGAAAAACAAGAGGTACTCGAGCCTTAACTACCAGAA-ATTAGTAGCCATCGTGGCGG 247
||||||||| ||||||| |||||||| ||||| || || | || |||||||| | ||||
Sbjct 268 CACGAAAAATAAGAGGTTCTCGAGCCCTAACT-TCAAAACACTACTAGCCATCATAGCGG 326
Query 248 CTAAACATGTATCGCATGTTCAGGCCACGGTGGTCTGCGCAAAGGCTAACGGTATACA-A 306
| ||||||||||| ||||||||||||||||| ||||||||||| | || ||||| || |
Sbjct 327 CAAAACATGTATCTCATGTTCAGGCCACGGTTGTCTGCGCAAAATCCAATGGTATCCAGA 386
Query 307 CTCCGTATCCGTAGTGGAGGTCATGACTACGAAGGCCTTTCTTACACATCGTCTGTGCCA 366
| |||||||| || || ||||||||| |||| || ||||||||| |||||||||||||
Sbjct 387 -TACGTATCCGAAGCGGTGGTCATGACAACGAGGGTTTTTCTTACATATCGTCTGTGCCA 445
Query 367 TTTGTTATCCTCGATATGTACAATTTGAGGTCTATTACTGTTGACGTGTCAAGCAAGAAA 426
||||| || ||||||||| ||||| |||||||||||| ||| ||||||| ||||||||
Sbjct 446 TTTGTCATTCTCGATATGCACAATCTGAGGTCTATTAATGTCAACGTGTCGAGCAAGAAC 505
Query 427 GCATGGGTTCAAGCTGGTGCGACATTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGC 486
|||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| |||
Sbjct 506 GCATGGATTCAAGCTGGTGCGACCTTGGGAGAGCTCTACGTAAAGATCAATGAGGCAAGC 565
Query 487 CAAACGTTAGCGTTCCCGGCTGGCGTTTGCCCTACGGTAGGAGTGGGTGGGCACATAACC 546
|||||| |||| || ||||||||||| |||||||||||||||| || || ||||||| |
Sbjct 566 CAAACGCTAGCATTTCCGGCTGGCGTGTGCCCTACGGTAGGAGCAGGAGGACACATAAGC 625
Query 547 GGTGGAGGATTTGGAAATCTGATGAGAAAATTCGGAATCACAGTGGATCATGTCATTGAT 606
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 626 GGTGGAGGGTTTGGAAATCTGATGAGAAAATTCGGAATCACAGTGGATCATGTCATTGAC 685
Query 607 GCTCAGTTAATTGGTGTCAACGGAAAGCTCTTGGATCGAGCTACCATGGGAGAAGATCTC 666
||||| ||||||| |||||| || |||||||| |||||||| |||||||||||||||||
Sbjct 686 GCTCAATTAATTGATGTCAAGGGTAAGCTCTTAAATCGAGCTGCCATGGGAGAAGATCTC 745
Query 667 TTTTGGGCCATTCGTGGCGGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATC 726
|||||||| ||||| |||||||||| | ||||| ||||||||||||||||||||||||
Sbjct 746 TTTTGGGCGATTCG---CGGTGGTGGTTCAAGTTTTGGAGTTATCCTCTCTTGGAAAATC 802
Query 727 AACCTCGTCGAGGTTCCAAAGATCCTGACAGTGTTTAAGGTTAGCAAAACATTGGAACAA 786
|||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 803 AACCTCGTGGAGGTTCCAAAGATCCTGACAGTGTTCAAGGTTAACAAAACATTGGAACAA 862
Query 787 GGAGGTACTGATGTTCTCTACAAGTGGCAGCTTGTTGCTACCAAAGTTCCTGA-AGATCT 845
||||| ||||||||||||||||||||||||||||| |||| |||| | ||||| || |||
Sbjct 863 GGAGGCACTGATGTTCTCTACAAGTGGCAGCTTGTCGCTAACAAACTCCCTGATAG-TCT 921
Query 846 TTTCATAAGAGCCTGGCCTCAGATTGTAAAAGGAACAAAACTCGG-CGAGAGAACCATTG 904
|||||||| ||| ||||||| || ||||| ||| |||||| ||| |||||||||||| |
Sbjct 922 TTTCATAACAGCATGGCCTCGGACAGTAAATGGACCAAAAC-CGGGCGAGAGAACCATCG 980
Query 905 GGGTTGTATTTTTTGCTCAGTTTTTGGGTCCAACCGATAAGCTGATGGAGATAATG-AGC 963
||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||| | |
Sbjct 981 CGGTTGTATTCTATGCTCAGTTCTTGGGTCCAACAGATAAGCTGATGGAGATAATGGA-C 1039
Query 964 CAAAGCTTGCCTGAATTAGGGCTAAGACGTGAAGATTGTCATGAAATGAGCTGGTTTAAC 1023
|| ||||| |||||||||| |||||| |||||||||||||| |||||||||||| |||||
Sbjct 1040 CAGAGCTTCCCTGAATTAGAGCTAAGCCGTGAAGATTGTCACGAAATGAGCTGGATTAAC 1099
Query 1024 ACGACGTTGTTTTGGGCCAATTATCCTGTA-GG-TACACCAAC-ACGCGTTCTTCTAGAT 1080
||||||||||||||||||||||| || | | || ||| ||| | |||| |||||||||
Sbjct 1100 ACGACGTTGTTTTGGGCCAATTACCC-G-ACGGGTACGGCAAAGA-GCGTCCTTCTAGAT 1156
Query 1081 AGACCGTC-GAC---TCCAGGAGAATTTTTCAAGAGCAAGTCAGATAACATaaaaaaaCC 1136
|| || || ||| | ||| | | |||||||| || || ||| | ||| ||||
Sbjct 1157 AGGCC-TCCGACAAATTCAGT-G--TCCTTCAAGAGTAAATCGGATTTTGTCAAAGAACC 1212
Query 1137 AATCCC-AAAAGAAGGATTGGAGAAGATATGGAAGACAATGTTGAAATTTAACT-T--TG 1192
|||||| |||| ||||||| |||||| | |||||||||||||| ||||| ||| | ||
Sbjct 1213 AATCCCCAAAA-AAGGATTAGAGAAGCTTTGGAAGACAATGTTTAAATTCAACAGTAGTG 1271
Query 1193 TATGGATTG-AATTCAACCCTTACGGTGGAGTGATGGATCGGATTCCAGCTACTGCCACA 1251
| | | ||| |||||||||||||||||||||| ||||| | |||||| || || |||||
Sbjct 1272 TCTCG-TTGCAATTCAACCCTTACGGTGGAGTAATGGACCAGATTCCGGCAACGGCCACT 1330
Query 1252 GCGTTTCCTCACCGGAAAGGAAACTTGTTCAATCTTCAATACTCTACGATATGGTTGGAC 1311
|| ||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct 1331 GCCTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTCTACGATGTGGTTTGAC 1390
Query 1312 GCAAAGGAAACAGAGAATAAGC-TGACTATGATGAAGGAGCTTTAT-GAAGTTGCGGGAC 1369
||||| | ||||||| || || || |||||||||||||||||| | || ||||||| ||
Sbjct 1391 GCAAACGCCACAGAGAGTA-GCCTGGCTATGATGAAGGAGCTTT-TCGAGGTTGCGGAAC 1448
Query 1370 CTTACGTGTCAAGTAACCCGAGAGAGGCGCTCTTTAATTTCAGAGACT-TCGATATTGGA 1428
| |||||||||||||||||||||||||| |||||||||||||||| | |||||||||||
Sbjct 1449 CGTACGTGTCAAGTAACCCGAGAGAGGCTTTCTTTAATTTCAGAGA-TGTCGATATTGGA 1507
Query 1429 ATCAATCCGAGTGGTTTGA-A--CGTGGATGAAGCTAAGATCTATGGATACAAGTATTTC 1485
| || ||| |||||| || | ||||||||| |||||||||||||||||||||||||||
Sbjct 1508 AGCAGTCCAAGTGGTGAGACAAACGTGGATGAGGCTAAGATCTATGGATACAAGTATTTC 1567
Query 1486 TTGGGGAATTTAAAGAGATTGATGGATGTTAAAGCTAAGTGTGATCCTGATAATTTCTTC 1545
||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 1568 TTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGAGAATTTCTTT 1627
Query 1546 AAGAACGAGCAGAGTATTCTTCCTGCTCGCGTAATGTAG 1584
||||||||||||||||||| ||| | ||| |||| ||||
Sbjct 1628 AAGAACGAGCAGAGTATTCCTCCGGTTCGTGTAAAGTAG 1666
> Ahg912411 jgi|Araly1|912411|Al_scaffold_0001_2665
Length=1368
Score = 1147 bits (621), Expect = 0.0
Identities = 707/749 (94%), Gaps = 4/749 (1%)
Strand=Plus/Plus
Query 446 CGACATTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAACGTTAGCGTTCCCGG 505
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 356 CGACCTTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAACGTTAGCGTTCCCTG 415
Query 506 CTGGCGTTTGCCCTACGGTAGGAGTGGGTGGGCACATAACCGGTGGAGGATTTGGAAATC 565
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 416 CTGGCGTTTGCCCTACGGTAGGAGTGGGTGGGCACATAAGCGGTGGAGGATTTGGAAATC 475
Query 566 TGATGAGAAAATTCGGAATCACAGTGGATCATGTCATTGATGCTCAGTTAATT-GGTGTC 624
||||| |||||||||||||||||||||||||||| |||||||||||||||||| || |
Sbjct 476 TGATGCGAAAATTCGGAATCACAGTGGATCATGTTATTGATGCTCAGTTAATTAACTG-C 534
Query 625 AACGGAAAGCTCTTGGATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCCATTCGTGGC 684
||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 535 AACGGCAAGCTCTTAGATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGCGGC 594
Query 685 GGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTTCCA 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 GGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTTCCA 654
Query 745 AAGATCCTGACAGTGTTTAAGGTTAGCAAAACATTGGAACAAGGAGGTACTGATGTTCTC 804
||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct 655 AAGATTCTGACAGTGTTTAAGGTTCGTAAAACATTGGAACAAGGAGGCACTGATGTTCTC 714
Query 805 TACAAGTGGCAGCTTGTTGCTACCAAAGTTCCTGAAGATCTTTTCATAAGAGCCTGGCCT 864
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 715 TACAAGTGGCAGCTTGTTGCTTCCAAATTTCCTGAAGATCTTTTCATAAGAGCCTGGCCT 774
Query 865 CAGATTGTAAAAGGAACAAAACTCGGCGAGAGAACCATTGGGGTTGTATTTTTTGCTCAG 924
||||||||||| ||||||||||||||| |||||||||| | ||||||||| |||||||||
Sbjct 775 CAGATTGTAAAGGGAACAAAACTCGGCAAGAGAACCATCGCGGTTGTATTCTTTGCTCAG 834
Query 925 TTTTTGGGTCCAACCGATAAGCTGATGGAGATAATGAGCCAAAGCTTGCCTGAATTAGGG 984
|||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||
Sbjct 835 TTTTTGGGTCCAACCGATAAGCTGATGGCGATAATGAGCCAGAGCTTGCCTGAACTAGGG 894
Query 985 CTAAGACGTGAAGATTGTCATGAAATGAGCTGGTTTAACACGACGTTGTTTTGGGCCAAT 1044
||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||
Sbjct 895 CTAAGACGTGATGATTGTCACGAAATGAGCTGGTTTTACACAACGTTGTTTTGGGCCAAT 954
Query 1045 TATCCTGTAGGTACACCAACA-CGCGTTCTTCTAGATAGACCGTCGACTCCAGGAGAATT 1103
||||| || || ||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct 955 TATCCGGTTGGCACACCAA-AGCGCGTTCTTCTAGATAGACCGTCGAGTCCAGGAGAATT 1013
Query 1104 TTTCAAGAGCAAGTCAGATAACATaaaaaaaCCAATCCCAAAAGAAGGATTGGAGAAGAT 1163
|||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1014 TTTCAAGAGCAAATCGGATAACATCAAAAAACCAATCCCAAAAGAGGGATTGGAGAAGAT 1073
Query 1164 ATGGAAGACAATGTTGAAATTTAACTTTG 1192
||||||||||||||||||||||||||||
Sbjct 1074 TTGGAAGACAATGTTGAAATTTAACTTTG 1102
Score = 466 bits (252), Expect = 2e-130
Identities = 324/358 (91%), Gaps = 7/358 (2%)
Strand=Plus/Plus
Query 1 ATGAAAGCATTATTCTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGATTTTAAG-AGCAGC 59
|||||||||| | |||||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 1 ATGAAAGCATCACTCTCTGTTTTGTGTCTTGTTCTTTTGGTTTCGGTTTT-AGAAGCAGC 59
Query 60 AGT---GACAAAACCAGATTCCGGAATCTTCACCGGATGCCTTCGCAATCGGACTAGTCT 116
||| ||||||||| |||| ||||| |||| ||||||||||||||||||||||||||
Sbjct 60 AGTAACAACAAAACCAAATTCTGGAATTTTCATCGGATGCCTTCGCAATCGGACTAGTCC 119
Query 117 GGAGAATCCAATCACCGATGCCATCTTCACCTCCCG-TAACACCACCACCTTCTTGTCTT 175
||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 120 GGAGAATCCAATCACCGATGCCATCTTCACC-GCCGATAACACCACCACCTTCTTGTCTT 178
Query 176 CTTACGTGTCCTACACGAAAAACAAGAGGTACTCGAGCCTTAACTACCAGAAATTAGTAG 235
|||||||||||||||||| |||||||||||||||||||| ||||||||| ||| || |||
Sbjct 179 CTTACGTGTCCTACACGAGAAACAAGAGGTACTCGAGCCCTAACTACCAAAAACTAATAG 238
Query 236 CCATCGTGGCGGCTAAACATGTATCGCATGTTCAGGCCACGGTGGTCTGCGCAAAGGCTA 295
||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||| | |
Sbjct 239 CCATCGTAGCGGCAAAACATGTATCTCATGTTCAGGCCACTGTGATCTGCGCAAAAACCA 298
Query 296 ACGGTATACAACTCCGTATCCGTAGTGGAGGTCATGACTACGAAGGCCTTTCTTACAC 353
||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct 299 ACGGTATTCAACTCCGTATCCGAAGCGGAGGTCATGACTACGAAGGCCTCTCTTACAC 356
Score = 411 bits (222), Expect = 1e-113
Identities = 253/268 (94%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 1318 GAAACAGAGAATAAGCTGACTATGATGAAGGAGCTTTATGAAGTTGCGGGACCTTACGTG 1377
||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1102 GAAACAGAGAATAAGATGACTATGATGAAGGAGCTTTACGAAGTTGCGGGACCGTACGTG 1161
Query 1378 TCAAGTAACCCGAGAGAGGCGCTCTTTAATTTCAGAGACTTCGATATTGGAATCAATCCG 1437
|||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||
Sbjct 1162 TCAAGTAACCCGAGAGAGGCGCTCTTAAATTTCAGAGACGTCGATATTGGAAGCAATCCG 1221
Query 1438 AGTGGTTTGAACGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTTA 1497
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222 AGTGGTGTGAACGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATTTA 1281
Query 1498 AAGAGATTGATGGATGTTAAAGCTAAGTGTGATCCTGATAATTTCTTCAAGAACGAGCAG 1557
||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||| |||
Sbjct 1282 AAGAGATTGATGGATATTAAAGCTAAGTGTGATGCTGAGAATTTCTTCAAAAACGAACAG 1341
Query 1558 AGTATT-CTTCCTGCTCGCGTAATGTAG 1584
|||||| || |||||||| |||||||||
Sbjct 1342 AGTATTTCT-CCTGCTCGTGTAATGTAG 1368
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59344601710
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5