BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G26410.1
Length=1765
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472779 jgi|Araly1|472779|fgenesh2_kg.1__2733__AT1G26410.1 2669 0.0
Ahg472781 jgi|Araly1|472781|fgenesh2_kg.1__2735__AT1G26380.1 1888 0.0
Ahg472778 jgi|Araly1|472778|fgenesh2_kg.1__2732__AT1G26420.1 1847 0.0
Ahg472780 jgi|Araly1|472780|fgenesh2_kg.1__2734__AT1G26390.1 1784 0.0
Ahg912411 jgi|Araly1|912411|Al_scaffold_0001_2665 754 0.0
> Ahg472779 jgi|Araly1|472779|fgenesh2_kg.1__2733__AT1G26410.1
Length=1738
Score = 2669 bits (1445), Expect = 0.0
Identities = 1642/1739 (94%), Gaps = 5/1739 (0%)
Strand=Plus/Plus
Query 1 AGTAAAAATGAAAGAAGCATTTGTTTTCCTTCTTTGCTTGACCAACAAGTTTCCAAAGAA 60
||||||||||||||| ||| ||||||| ||||||| ||||||||| ||||||||| ||||
Sbjct 1 AGTAAAAATGAAAGAGGCACTTGTTTTTCTTCTTTTCTTGACCAAAAAGTTTCCAGAGAA 60
Query 61 GTTTAATAGTTGCTCAAAAAAGAAAGAAACACTTTATGTTTTGGGTCTTGTTCTTCTTGT 120
||| ||||||||||||||||||||||||||||| | ||||||| |||||||||||||| |
Sbjct 61 GTTCAATAGTTGCTCAAAAAAGAAAGAAACACTCTGTGTTTTGTGTCTTGTTCTTCTTAT 120
Query 121 TTCG-TTTATAGAAGCACCAGTGACAAAACCAAATTTTGGAAAGTTCATCGAATGCCTAC 179
|||| ||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 121 TTCGATTT-TAGAAGCACCAGTAACAAAACCAAACTTTGGAAAGTTCATCGAATGCCTAC 179
Query 180 GCGATCGGACTACTCCGGAGAATCCAATCACCGATGTCATCTCCATCGCCGATAATTCCA 239
|||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||
Sbjct 180 GCGATCGGACTACTCCGGAGAATCCAATCACCGATGCCCTCTCCATCGCCGATAACACCA 239
Query 240 CCACCTTCTTGTCTTCTTACGTGTCATACACGAAAAACAAGAGGTTCTCGAGCCCTAACT 299
|||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 240 CCACTTTCTTGTCTTCATACGTGTCATACACGAAAAATAAGAGGTTCTCGAGCCCTAACT 299
Query 300 TCAAAAAACTACTAGCCATCATAGCGGCGAAACATGTATCTCATGTTCAGGCCACGGTAG 359
|||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 300 TCAAAACACTACTAGCCATCATAGCGGCAAAACATGTATCTCATGTTCAGGCCACGGTTG 359
Query 360 TCTGCGCAAAGTCCAATGGTATCCAGCTCCGTATCCGAAGCGGTGGTCATGACAACGAGG 419
|||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 360 TCTGCGCAAAATCCAATGGTATCCAGATACGTATCCGAAGCGGTGGTCATGACAACGAGG 419
Query 420 GTTTTTCTTACATGTCGTCTGTGCCATTTGTCATTCTCGATATGCACAATCTGAGGTCTA 479
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GTTTTTCTTACATATCGTCTGTGCCATTTGTCATTCTCGATATGCACAATCTGAGGTCTA 479
Query 480 TTGATGTCAACTTGTCGAGAAAGAACGCATGGGTTCAAGCTGGTGCGACATTGGGAGAGC 539
|| |||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||
Sbjct 480 TTAATGTCAACGTGTCGAGCAAGAACGCATGGATTCAAGCTGGTGCGACCTTGGGAGAGC 539
Query 540 TCTACGTAAAGATCAATGAGGCAAGCCAAACGCTAGCGTTCCCGGCTGGCGTGTGCCCTA 599
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 540 TCTACGTAAAGATCAATGAGGCAAGCCAAACGCTAGCATTTCCGGCTGGCGTGTGCCCTA 599
Query 600 CGGTAGGAGCAGGGGGACACATAAGCGGTGGAGGGTTTGGAAATCTGATGAGAAAATTCG 659
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CGGTAGGAGCAGGAGGACACATAAGCGGTGGAGGGTTTGGAAATCTGATGAGAAAATTCG 659
Query 660 GAATCACAGTAGATCATGTCATTGACGCACAAATCATTGATGTCAATGGCAAGCTCTTGA 719
|||||||||| ||||||||||||||||| ||| | ||||||||||| || |||||||| |
Sbjct 660 GAATCACAGTGGATCATGTCATTGACGCTCAATTAATTGATGTCAAGGGTAAGCTCTTAA 719
Query 720 ATCGAGCTGCCATGGGAGAAGATCTCTTTTGGGCGATTCGCGGTGGTGGTTCAAGTTTTG 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 ATCGAGCTGCCATGGGAGAAGATCTCTTTTGGGCGATTCGCGGTGGTGGTTCAAGTTTTG 779
Query 780 GAGTTATTCTATCTTGGAAAATCAACCTCGTGGAGGTTCCAAAGATCCTGACAGTGTTTA 839
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 780 GAGTTATCCTCTCTTGGAAAATCAACCTCGTGGAGGTTCCAAAGATCCTGACAGTGTTCA 839
Query 840 AGGTTAACAAAACATTAGAACAAGGAGGCACTGATATTCTTTACAAGTGGCAGCTTGTCG 899
|||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct 840 AGGTTAACAAAACATTGGAACAAGGAGGCACTGATGTTCTCTACAAGTGGCAGCTTGTCG 899
Query 900 CTAATAAACTACCTGATAGTCTTTTCATAACAGCATGGCCTAGGACCGTAAATGGACCAA 959
|||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 900 CTAACAAACTCCCTGATAGTCTTTTCATAACAGCATGGCCTCGGACAGTAAATGGACCAA 959
Query 960 AACCCGGCGAGAGAACCGTCGCGGTTGTATTCTATGCTCAGTTCTTGGGTCCAACAGATA 1019
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 AACCGGGCGAGAGAACCATCGCGGTTGTATTCTATGCTCAGTTCTTGGGTCCAACAGATA 1019
Query 1020 AGCTGATGGAGATAATGGACCAGAGCTTCCCTGAATTAGGGTTAGGACGTGAAGATTGCC 1079
||||||||||||||||||||||||||||||||||||||| | || | ||||||||||| |
Sbjct 1020 AGCTGATGGAGATAATGGACCAGAGCTTCCCTGAATTAGAGCTAAGCCGTGAAGATTGTC 1079
Query 1080 ACGAAATGAGCTGGCTTAACACAACGTTGTTTTGGGCCAATTACCCGGCGGGTACACCCA 1139
|||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |
Sbjct 1080 ACGAAATGAGCTGGATTAACACGACGTTGTTTTGGGCCAATTACCCGACGGGTACGGCAA 1139
Query 1140 AGAGCATCCTTCTAGATAGGCCTCCGACGAATTCAGTGTCATTTAAGAGTAAATCGGATT 1199
||||| |||||||||||||||||||||| ||||||||||| || ||||||||||||||||
Sbjct 1140 AGAGCGTCCTTCTAGATAGGCCTCCGACAAATTCAGTGTCCTTCAAGAGTAAATCGGATT 1199
Query 1200 TTGTCAAAAAACCAATACCCAAAAAAGGTTTAGAGAAGCTTTGGAAGACAATGTTTAAAT 1259
|||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1200 TTGTCAAAGAACCAATCCCCAAAAAAGGATTAGAGAAGCTTTGGAAGACAATGTTTAAAT 1259
Query 1260 TCAACAGTAGCGTCTCGTTGCAATTCAACCCTTACGGTGGAGTGATGGACCGGATTCCGG 1319
|||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 1260 TCAACAGTAGTGTCTCGTTGCAATTCAACCCTTACGGTGGAGTAATGGACCAGATTCCGG 1319
Query 1320 CAACGGCCACCGCTTTTCCTCATCGGAAAGGAAACTTGTTCAAGGTTCAATACTCTACGA 1379
|||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1320 CAACGGCCACTGCCTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTCTACGA 1379
Query 1380 TGTGGTTTGACGCAAACGCCACAGAGAGTAGCCTGGCTATGATGAATGAGCTTTTTGAGG 1439
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1380 TGTGGTTTGACGCAAACGCCACAGAGAGTAGCCTGGCTATGATGAAGGAGCTTTTCGAGG 1439
Query 1440 TGGCGGAACCGTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTTCAGAGACATCG 1499
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1440 TTGCGGAACCGTACGTGTCAAGTAACCCGAGAGAGGCTTTCTTTAATTTCAGAGATGTCG 1499
Query 1500 ATATTGGAAGCAATCCAAGTGGTGAGACAAACGTGGATGAAGCTAAGATCTACGGATCCA 1559
|||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||
Sbjct 1500 ATATTGGAAGCAGTCCAAGTGGTGAGACAAACGTGGATGAGGCTAAGATCTATGGATACA 1559
Query 1560 AGTATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGATA 1619
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1560 AGTATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGAGA 1619
Query 1620 ATTTCTTCAAGAACGAGCAGAGTATTCCTCCGGTTCGTGTAAAGTAGTGATAT-TAAGTT 1678
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1620 ATTTCTTTAAGAACGAGCAGAGTATTCCTCCGGTTCGTGTAAAGTAGTGATATATAAGTT 1679
Query 1679 ATCTGGGCATGTGTTATAGGCTTATAGTCTCTATGTAGTTTGCCT-TGTTTAATCATTA 1736
|| ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||
Sbjct 1680 ATTTGGGCATGTGTTATAGGCTTATAGTCTATATGTAGTTTGC-TATGTTTAATCATTA 1737
> Ahg472781 jgi|Araly1|472781|fgenesh2_kg.1__2735__AT1G26380.1
Length=1581
Score = 1888 bits (1022), Expect = 0.0
Identities = 1402/1585 (88%), Gaps = 28/1585 (2%)
Strand=Plus/Plus
Query 77 AAAAAGAAAGAAACACTTTATGTTTTGGGTCTTGTTCTTCTT-GTTTC-GTTTATAGAAG 134
|||| ||||||| || ||||||||||| |||||||||| || ||||| | || ||||||
Sbjct 4 AAAATGAAAGAAGCATTTTATGTTTTGTATCTTGTTCTT-TTGGTTTCGGGTT-TAGAAG 61
Query 135 CACCAGTGACAAAACCAAATTTTGGAAAGTTCATCGAATGCCTACGCGATCGGACTACTC 194
|| |||||| ||||| |||| |||||| |||||||||||||| ||| | |||| || ||
Sbjct 62 CATTAGTGACGAAACCTAATTCTGGAAACTTCATCGAATGCCTTCGCTACCGGATTAGTC 121
Query 195 CGGAGAATCCAATCACCGATGTCATCTCCATC-GCCGATAATTCCACCACCTTCTTGTCT 253
||||||||||||||||||||| ||||| | | |||||||| |||||||||||||||||
Sbjct 122 CGGAGAATCCAATCACCGATGCCATCTTTA-CAGCCGATAACACCACCACCTTCTTGTCT 180
Query 254 TCTTACGTGTCATACACGAAAAACAAGAGGTTCTCGAGCCCTAACTTCAAAAAACTACTA 313
|||||| |||||||||||||||||| |||||| |||||||| |||| |||||||||||||
Sbjct 181 TCTTACTTGTCATACACGAAAAACACGAGGTTTTCGAGCCCAAACTACAAAAAACTACTA 240
Query 314 GCCATCATAGCGGCGAAACATGTATCTCATGTTCAGGCCACGGTAGTCTGCGCAAAGTCC 373
|||||| ||| |||||| ||||| ||||||||||||| ||||| |||||||||||||||
Sbjct 241 GCCATCGTAGTGGCGAATGATGTAGCTCATGTTCAGGCAACGGTGGTCTGCGCAAAGTCC 300
Query 374 AATGGTATCCAGCTCCGTATCCGAAGCGGTGGTCATGACAACGAGGGTTTTTCTTACATG 433
|||||||||||| | || |||||||||||||||||||||||||| || ||||||||| |
Sbjct 301 AATGGTATCCAGATACGAATCCGAAGCGGTGGTCATGACAACGAAGGCCTTTCTTACACG 360
Query 434 TCGTCTGTGCCATTTGTCATTCTCGATATGCACAATCTGAGGTCTATTGA-TGTCAACTT 492
||||||||||||||||||||||| |||||||||||||||||| ||||| | ||| || |
Sbjct 361 TCGTCTGTGCCATTTGTCATTCTTGATATGCACAATCTGAGGACTATT-ACTGTTGACGT 419
Query 493 GTCGAGAAAGAACGCATGGGTTCAAGCTGGTGCGACATTGGGAGAGCTCTACGTAAAGAT 552
||| || ||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 420 GTCAAGCAAGAAAGCATGGGTTCAAGCTGGTGCGACCTTGGGAGAGCTGTACGTGAAGAT 479
Query 553 CAATGAGGCAAGCCAAACGCTAGCGTTCCCGGCTGGCGTGTGCCCTACGGTAGGAGCAGG 612
|||||||||||||||||||||||| ||||| |||||| | ||| ||||||||||||| ||
Sbjct 480 CAATGAGGCAAGCCAAACGCTAGCATTCCCTGCTGGCATTTGCGCTACGGTAGGAGCTGG 539
Query 613 GGGACACATAAGCGGTGGAGGGTTTGGAAATCTGATGAGAAAATTCGGAATCACAGTAGA 672
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 540 AGGACACATAAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAATCACAGTGGA 599
Query 673 TCATGTCATTGACGCACAAATCATTGATGTCAATGGCAAGCTCTTGAATCGAGCTGCCAT 732
|||||||||||| || ||| | ||||||||||| ||||||||| |||||||| || ||||
Sbjct 600 TCATGTCATTGATGCTCAATTAATTGATGTCAACGGCAAGCTCCTGAATCGATCTTCCAT 659
Query 733 GGGAGAAGATCTCTTTTGGGCGATTCGCGGTGGTGGT--T-CAAGTTTTGGAGTTATTCT 789
||||||||||||||||||||||||||| ||||||||| | ||||||| |||||||| ||
Sbjct 660 GGGAGAAGATCTCTTTTGGGCGATTCGTGGTGGTGGTGGTGCAAGTTTCGGAGTTATCCT 719
Query 790 ATCTTGGAAAATCAACCTCGTGGAGGTTCCAAAGATCCTGACAGTGTTTAAGGTTAACAA 849
|||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 720 CTCTTGGAAAATCAAGCTCGTTGAGGTTCCAAAGATCTTGACAGTGTTTAAGGTTAACAA 779
Query 850 AACATTAGAACAAGGAGGCACTGATATTCTTTACAAGTGGCAGCTTGTCGCTAATAAACT 909
|||||| |||||||||||||||||| |||| ||||||||||||||||||||||| ||| |
Sbjct 780 AACATTGGAACAAGGAGGCACTGATGTTCTCTACAAGTGGCAGCTTGTCGCTAACAAATT 839
Query 910 ACCTGATAGTCTTTTCATAACAGC-ATGGCCT-AGGACCGTAAATGGACCAAAACCCGGC 967
||||||| ||||||| | | ||| || |||| ||| |||||||||| |||| | |||
Sbjct 840 CCCTGATAATCTTTTCTTGAGAGCAAT-GCCTCAGG-TCGTAAATGGAACAAATCACGGT 897
Query 968 GAGAGAACCGTCGCGGTTGTATTCTATGCTCAGTTCTTGGGTCCAACAGATAAGCTGATG 1027
||||||||| ||||||||||||||| |||||||||||||||| ||| ||| ||||||||
Sbjct 898 GAGAGAACCATCGCGGTTGTATTCTGGGCTCAGTTCTTGGGTCGAACCGATGAGCTGATG 957
Query 1028 G-AGATAATGGACCAGAGCTTCCCTGAATTAGGGTTAGGACGTGAAGATTGCCACGAAAT 1086
| | |||||| | |||||||| |||||||||||| || ||||||||||||| || |||||
Sbjct 958 GCA-ATAATGAAGCAGAGCTTTCCTGAATTAGGGCTAAGACGTGAAGATTGTCAAGAAAT 1016
Query 1087 GAGCTGGCTTAACACAACGTTGTTTTGGGCCA-ATTACCCGGCGGGTACACCCAAGAGCA 1145
||||||||||||||| |||||||||||||||| ||| || ||||||||||| |||| |
Sbjct 1017 GAGCTGGCTTAACACGACGTTGTTTTGGGCCATGTTA-CCAGCGGGTACACCGAAGACCG 1075
Query 1146 TCCTTCTAGATAGGCCTCCGACGAATTCAGT-GTCATTTAAGAGTAAATCGGATTTTGTC 1204
||||||||||||| ||| ||| || |||| || ||||||||||||||||||| |||
Sbjct 1076 TCCTTCTAGATAGACCT---ACGGATCCAGTATTC-TTTAAGAGTAAATCGGATTACGTC 1131
Query 1205 AAAAAACCAATACCCAAAAAAGGTTTAGAGAAGCTTTGGAAGACAATGTTTAAATTCAAC 1264
||||| ||||| |||||| |||| || |||||| |||||||||||||||| |||||||||
Sbjct 1132 AAAAAGCCAATCCCCAAAGAAGGATTGGAGAAGATTTGGAAGACAATGTTGAAATTCAAC 1191
Query 1265 AGTAGCGTCTCGTTGCAATTCAACCCTTACGGTGGAGTGATGGACCGGATTCCGGC-AAC 1323
| || || | | |||| |||||||||||||||||| |||||| |||||||||||| |||
Sbjct 1192 AATATTGTGTGGCTGCACTTCAACCCTTACGGTGGAATGATGGCCCGGATTCCGGCAAAC 1251
Query 1324 GGCCACCGCTTTTCCTCATCGGAAAGGAAACTTGTTCAAGGTTCAATACTCTACGATGTG 1383
||||| || |||||||| ||||||||||||||||||||||||||||||| ||| | ||
Sbjct 1252 -GCCACAGCGTTTCCTCACCGGAAAGGAAACTTGTTCAAGGTTCAATACTATACTACATG 1310
Query 1384 GTTTGACGCAAACGCCACAGAGAGTAGCCTG-GCTATGATGAATGAGCTTTTTGAGGTGG 1442
||| ||| |||||||||||||||||| | || | ||||||||| ||||| | ||||| |
Sbjct 1311 GTTGGACCCAAACGCCACAGAGAGTAACTTGAG-TATGATGAAGGAGCTCTACGAGGTTG 1369
Query 1443 CGGAACCGTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTTCAGAGACATCGATA 1502
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1370 CAGAACCGTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTACAGAGACATCGATA 1429
Query 1503 TTGGAAGCAATCCAAGTGGTGAGACAAACGTGGATGAAGCTAAGATCTACGGATCCAAGT 1562
|||||||||||||||||||||||||||||||||| || ||||||||||| |||| |||||
Sbjct 1430 TTGGAAGCAATCCAAGTGGTGAGACAAACGTGGACGAGGCTAAGATCTATGGATACAAGT 1489
Query 1563 ATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGATAATT 1622
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1490 ATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGATAACT 1549
Query 1623 TCTTCAAGAACGAGCAGAGTATTCC 1647
|||||||||||||||||||||||||
Sbjct 1550 TCTTCAAGAACGAGCAGAGTATTCC 1574
> Ahg472778 jgi|Araly1|472778|fgenesh2_kg.1__2732__AT1G26420.1
Length=1587
Score = 1847 bits (1000), Expect = 0.0
Identities = 1403/1598 (88%), Gaps = 26/1598 (2%)
Strand=Plus/Plus
Query 82 GAAAGAAACACTTTATGTTTTGGGTCTTGTTCTTCTT-GTTTC-GTTTATAGAAGCACCA 139
||||||| | |||| ||||||| ||||||||||| || ||||| |||| |||||||| ||
Sbjct 3 GAAAGAAGCCCTTTCTGTTTTGTGTCTTGTTCTT-TTGGTTTCGGTTT-TAGAAGCAGCA 60
Query 140 GTGACAAAACCAAATTTTGGAAAGTTCATCGAATGCCTACGCGATCGGACTACTCCGGAG 199
|| || |||||||| ||||| | |||||||||||||| ||| |||| || | | |||||
Sbjct 61 GTAACGAAACCAAAATTTGGGGACTTCATCGAATGCCTTCGCTATCGTACAAGTTCGGAG 120
Query 200 AATCCAATCACCGATGTCATCTCCATCGCCGATAATTCCACCACCTTCTTGTCTTCTTAC 259
|||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||
Sbjct 121 AATCCAATCACCAATGCCCTCTCCATCGCCGATAACACCACCACCTTCTTGTCTTCTTAC 180
Query 260 GTGTCATACACGAAAAACAAGAGGTTCTCGAGCCCTAACTTCAAAAAACTACTAGCCATC 319
|||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||| |||
Sbjct 181 TTGTCCTACACGAAAAACAGGAGGTACTCAAGCCCTAACTTCAAAAAACTACTAGCTATC 240
Query 320 ATAGCGGCGAAACATGTATCTCATGTTCAGGCCACGGTAGTCTGCGCAAAGTCCAATGGT 379
|||||||||||||||||||||||||||||||||| || |||||||||||| |||| |||
Sbjct 241 GTAGCGGCGAAACATGTATCTCATGTTCAGGCCACAGTGGTCTGCGCAAAGACCAACGGT 300
Query 380 ATCCAGCTCCGTATCCGAAGCGGTGGTCATGACAACGAGGGTTTTTCTTACATGTCGTCT 439
|| || || |||||||||||||| ||||||||| ||| || ||||||||| |||||||
Sbjct 301 ATACAACTGCGTATCCGAAGCGGCGGTCATGACCTCGAAGGCCTTTCTTACAGGTCGTCT 360
Query 440 GTGCCATTTGTCATTCTCGATATGCACAATCTGAGGTCTATTGA-TGTCAACTTGTCGAG 498
|||||||||||||||||||| ||| |||||| || |||||| | ||| || | |||||
Sbjct 361 GTGCCATTTGTCATTCTCGACATGTTCAATCTCAGATCTATT-ACTGTTGACGTATCGAG 419
Query 499 AAAGAACGCATGGGTTCAAGCTGGTGCGACATTGGGAGAGCTCTACGTAAAGATCAATGA 558
||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 420 CAAGAAAGCATGGGTTCAAGCTGGTGCAACCTTGGGAGAGCTCTACGTAAAGATCAATGA 479
Query 559 GGCAAGCCAAACGCTAGCGTTCCCGGCTGGCGTGTGCCCTACGGTAGGAGCAGG-GGGAC 617
|||||||||||||||||| || || |||||||| |||||||||||||||| ||| ||| |
Sbjct 480 GGCAAGCCAAACGCTAGCATTTCCAGCTGGCGTTTGCCCTACGGTAGGAGTAGGAGGG-C 538
Query 618 ACATAAGCGGTGGAGGGTTTGGAAATCTGATGAGAAAATTCGGAATCACAGTAGATCATG 677
|||| ||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||
Sbjct 539 ACATTAGCGGTGGAGGGTATGGAAATCTGATGAGAAAATTCGGAATTACAGTGGATCATG 598
Query 678 TCATTGACGCACAAATCATTGATGTCAATGGCAAGCTCTTGAATCGAGCTGCCATGGGAG 737
||||||| || ||| | ||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct 599 TCATTGATGCTCAATTAATTGATGTCAACGGCAAGCTCTTAAATCGAGCTACCATGGGAG 658
Query 738 AAGATCTCTTTTGGGCGATTCG---CGGTGGTGGTTCAAGTTTTGGAGTTATTCTATCTT 794
|||||||||||||||| ||||| ||| |||||| | |||||||||||||| || ||||
Sbjct 659 AAGATCTCTTTTGGGCCATTCGAGGCGGCGGTGGTGCGAGTTTTGGAGTTATCCTCTCTT 718
Query 795 GGAAAATCAACCTCGTGGAGGTTCCAAAGATCCTGACAGTGTTTAAGGTTAACAAAACAT 854
|||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||
Sbjct 719 GGAAAATCAACCTCGTCGAAGTTCCAAAGATCCTGACAGTTTTTAAGGTTAATAAAACAT 778
Query 855 TAGAACAAGGAGGCACTGATATTCTTTACAAGTGGCAGCTTGTCGCTAATAAACTACCTG 914
| |||||||||||||||||| |||| |||||||||||||||||||||| ||| | ||||
Sbjct 779 TGGAACAAGGAGGCACTGATGTTCTCTACAAGTGGCAGCTTGTCGCTACCAAATTCCCTG 838
Query 915 AT-AGTCTTTTCATAACAGCATGGCCT-AGGACCGTAAATGGACCAAAACCCGGCGAGAG 972
|| | |||||| || | |||||||||| || | |||||||||| || ||| ||||||||
Sbjct 839 ATGA-TCTTTTTATGAGAGCATGGCCTCAG-ATCGTAAATGGAACAGAACGTGGCGAGAG 896
Query 973 AACCGTCGCGGTTGTATTCTATGCTCAGTTCTTGGGTCCAACAGATAAGCTGATGGAGAT 1032
|||| |||| |||||||||||||||||||||||||||||| | ||||||||||||| |||
Sbjct 897 AACCATCGCAGTTGTATTCTATGCTCAGTTCTTGGGTCCAGCTGATAAGCTGATGGCGAT 956
Query 1033 AATGGACCAGAGCTTCCCTGAATTAGGGTTAGGACGTGAAGATTGCCACGAAATGAGCTG 1092
|||| ||||||| || |||||||||||| || |||||||||||| ||||||||||||||
Sbjct 957 AATGAACCAGAGATTGCCTGAATTAGGGCTAAAACGTGAAGATTGTCACGAAATGAGCTG 1016
Query 1093 GCTTAACACAACGTTGTTTTGGGCCAATTACCCGGCGGGTACACCCAAGAGCATCCTTCT 1152
| ||||||| || ||||||||||| ||||||||| ||| ||||| |||||| | |||||
Sbjct 1017 GTTTAACACGACATTGTTTTGGGCTGATTACCCGGTGGGAACACCGAAGAGCGTTCTTCT 1076
Query 1153 AGATAGGCCTCCGACGAATTCAGTG-T-CATTTAAGAGTAAATCGGATTTTGTCAAAAAA 1210
||||||||| ||||||| ||| | | | |||||||| ||||| |||| || |||| |
Sbjct 1077 AGATAGGCC---GACGAATCCAG-GATTC-TTTAAGAGCAAATCAGATTACGTTAAAACA 1131
Query 1211 CCAATACCCAAAA-AAGGTTTAGAGAAGCTTTGGAAGACAATGTTTAAATTCAACAGTAG 1269
||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 1132 CCAAT-CCCAAAAGAAGGACTAGAGAAGCTTTGGAAGACAATGTTTAAATTCAACAATAT 1190
Query 1270 CGTCTCGTTGCAATTCAACCCTTACGGTGGAGTGATGGACCGGATTCCGGCAACGGCCAC 1329
|| | | |||||||||| |||||||||||||||||||||||||||| |||| |||||
Sbjct 1191 TGTGTGGATGCAATTCAATGCTTACGGTGGAGTGATGGACCGGATTCCTACAACTGCCAC 1250
Query 1330 CGCTTTTCCTCATCGGAAAGGAAACTTGTTCAAGGTTCAATACTCTACGATGTGGTTTGA 1389
|| ||||||||||| ||||||||| |||||||||||||||||||||||| |||||| ||
Sbjct 1251 AGCGTTTCCTCATCGTAAAGGAAACATGTTCAAGGTTCAATACTCTACGACGTGGTTGGA 1310
Query 1390 CGCAAACGCCACAGAGAGTAGCCTG-GCTATGATGAATGAGCTTTTTGAGGTGGCGGAAC 1448
|||||||||||||||| |||||| | ||||||||| ||||||| ||||| |||||||
Sbjct 1311 TGCAAACGCCACAGAGACTAGCCTAAG-TATGATGAAGGAGCTTTACGAGGTTGCGGAAC 1369
Query 1449 CGTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTTCAGAGACATCGATATTGGAA 1508
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1370 CGTACGTGTCAAGTAACCCAAGAGAGGCCTTCTTTAATTACAGAGACATCGATATTGGAA 1429
Query 1509 GCAATCCAAGTGGTGAGACAAACGTGGATGAAGCTAAGATCTACGGATCCAAGTATTTCT 1568
||||||||||| |||||||| |||| ||||| ||||||||||| |||| |||||||||||
Sbjct 1430 GCAATCCAAGTAGTGAGACAGACGTAGATGAGGCTAAGATCTATGGATACAAGTATTTCT 1489
Query 1569 TGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGATAATTTCTTCA 1628
||||||||||||||||| ||||| | || |||||||||| ||||||||| ||||| ||||
Sbjct 1490 TGGGGAATTTGAAGAGACTGATGCAAGTCAAAGCTAAGTGTGATCCTGAGAATTTTTTCA 1549
Query 1629 AGAACGAGCAGAGTATTCCTCCGGTTCGTGTAAAGTAG 1666
|||||||||||||||||||||| |||||||||| ||||
Sbjct 1550 AGAACGAGCAGAGTATTCCTCCTGTTCGTGTAATGTAG 1587
> Ahg472780 jgi|Araly1|472780|fgenesh2_kg.1__2734__AT1G26390.1
Length=1653
Score = 1784 bits (966), Expect = 0.0
Identities = 1406/1616 (87%), Gaps = 40/1616 (2%)
Strand=Plus/Plus
Query 82 GAAAGAAACACTTTATGTTTTGGGTCTTGTTCTTCTTGTTTC-GTTTATAGAAGCACCAG 140
||||||| |||||| ||||||| ||||||| ||||| ||||| |||| |||||||| |||
Sbjct 4 GAAAGAAGCACTTTCTGTTTTGTGTCTTGTACTTCTGGTTTCGGTTT-TAGAAGCAGCAG 62
Query 141 TGACAAAACCAAATTTTGGAA-AGTTCATCGAATGCCTACGCGATCGGACTACTCCGGAG 199
| || |||||||| ||| ||| | ||||||| |||||| ||| |||| |||| |||||||
Sbjct 63 TAACGAAACCAAAATTT-GAAGACTTCATCGGATGCCTTCGCTATCGTACTAGTCCGGAG 121
Query 200 AATCCAATCACCGATGTCATCTCCATCGCCGATAATTCCACCACCTTCTTGTCTTCTTAC 259
|||||||||||||||| |||||||||||||||||| ||||| |||||||||| ||||||
Sbjct 122 AATCCAATCACCGATGCCATCTCCATCGCCGATAACACCACCGCCTTCTTGTCCTCTTAC 181
Query 260 GTGTCATACACGAAAAACAAGAGGTTCTCGAGCCCTAACTT-CAAAAAACTACTAGCCAT 318
|| || |||||||||||||| ||||||| ||||||||| || |||||||||||||||||
Sbjct 182 GTATCCTACACGAAAAACAAAAGGTTCTTGAGCCCTAA-TTATAAAAAACTACTAGCCAT 240
Query 319 CA-TAGCGGCGAAACATGTATCTCATGTTCAGGCCACGGTAGTCTGCGCAAAGTCCAATG 377
| | || || ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 241 -AGTGGCCGCAAAACATGCATCTCATGTTCAGGCCACGGTAGTCTGCGCAAAGTCCAATG 299
Query 378 GTATCCAGCTCCGTATCCGAAGCGGTGGTCATGACAACGAGGGTTTTTCTTACATGTCGT 437
|||||||||||||||| |||||||| ||||||||| |||| || |||||||||||||||
Sbjct 300 GTATCCAGCTCCGTATACGAAGCGGCGGTCATGACTACGAAGGCCTTTCTTACATGTCGT 359
Query 438 CTGTGCCATTTGTCATTCTCGATATGCACAATCTGAGGTCTATTGA-TGTCAACTTGTCG 496
||||||||||||| |||||||||||| ||||||||||||||||| | ||| || ||||
Sbjct 360 CTGTGCCATTTGTTATTCTCGATATGTACAATCTGAGGTCTATT-ACTGTTGACGTGTCA 418
Query 497 AGAAAGAACGCATGGGTTCAAGCTGGTGCGACATTGGGAGAGCTCTACGTAAAGATCAAT 556
|| ||||| || |||||||||||||||||||| ||||||||||||||| |||| |||||
Sbjct 419 AGCAAGAAAGCGTGGGTTCAAGCTGGTGCGACCTTGGGAGAGCTCTACACAAAGGTCAAT 478
Query 557 GAGGCAAGCCAAACGCTAGCGTTCCCGGCTGGCGTGTGCCCTACGGTAGGAGCAGG-GGG 615
|| | ||||||||| ||||| |||||||||||||| ||| |||| |||||||| || |||
Sbjct 479 GACGTAAGCCAAACACTAGCTTTCCCGGCTGGCGTTTGCGCTACCGTAGGAGCTGGTGGG 538
Query 616 ACACATAAGCGGTGGAGGGTTTGGAAATCTGATGAGAAAATTCGGAATCACAGTAGATCA 675
|||||||| |||||||||| |||||||||||||||||||| ||||||||| || ||| |
Sbjct 539 -CACATAAGTGGTGGAGGGTATGGAAATCTGATGAGAAAATACGGAATCACTGTGGATAA 597
Query 676 TGTCATTGACGCACAAATCATTGATGTCAATGGCAAGCTCTTGAATCGAGCTG-CCATGG 734
||||||||| || ||||| ||||||||||| || ||||||||||||||| || ||||||
Sbjct 598 TGTCATTGATGCTCAAATAATTGATGTCAACGGAAAGCTCTTGAATCGA-CTTACCATGG 656
Query 735 GAGAAGATCTCTTTTGGGCGATTCG---CGGTGGTGGTTCAAGTTTTGGAGTTATTCTAT 791
|||| |||||||||||||||||||| |||||| ||| ||||| |||||||| || |
Sbjct 657 GAGAGGATCTCTTTTGGGCGATTCGTGGCGGTGGCGGTGGGAGTTTCGGAGTTATCCTCT 716
Query 792 CTTGGAAAATCAACCTCGTGGAGGTTCCAAAGATCCTGACAGTGTTTAAGGTTAACAAAA 851
||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||
Sbjct 717 CTTGGAAAATCAACCTCGTCGAGGTTCCAAAGATCGTGACAGTATTTAAGGTTAACAAAA 776
Query 852 CATTAGAACAAGGAGGCACTGATATTCTTTACAAGTGGCAGCTTGTCGCTAATAAACTAC 911
|||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | |
Sbjct 777 CATTGGAACAAGGAGGCACTGATGTTCTTTACAAGTGGCAGCTTGTCGCTAGCAAATTCC 836
Query 912 CTGATAGTCTTTTCATAACAGCA-TGGCCT-AGGACCGTAAATGGACCAAAACCCGGCGA 969
|||| ||||||||| | | |||| || ||| ||| | | ||||||| |||||| ||||||
Sbjct 837 CTGAAAGTCTTTTCGTGAGAGCAATG-CCTCAGGTC-GCAAATGGAACAAAACGCGGCGA 894
Query 970 GAGAACCGTCGCGGTTGTATTCTATGCTCAGTTCTTGGGTCCAACAGATAAGCTGATGGA 1029
||||||| ||| |||||||||||||||||||| ||||||| ||| ||| |||||||||
Sbjct 895 GAGAACCATCGTTGTTGTATTCTATGCTCAGTTTTTGGGTCGAACCGATGAGCTGATGGC 954
Query 1030 GATAATGGACCAGAGCTTCCCTGAATTAGGGTTAGGACGTGAAGATTGCCACGAAATGAG 1089
||||||| |||| | || |||||| ||||| || || ||||||||| || ||||||||
Sbjct 955 GATAATGAACCAAAACTGGCCTGAACTAGGGCTAAAACATGAAGATTGTCAAGAAATGAG 1014
Query 1090 CTGGCTTAACACAACGTTGTTTTGGGCCA-ATTACCCGGCGGGTACACCCAAGAGCATCC 1148
|||||||||| | |||||||||||||| | |||| || || |||||||| | |||||| |
Sbjct 1015 CTGGCTTAACTCGACGTTGTTTTGGGC-AGATTATCCAGCCGGTACACCGACGAGCATTC 1073
Query 1149 TTCTAGATAGGCC-TCCGACGAATTCAGT-G-TCATTT-AAGAGTAAATCGGATTTTGTC 1204
|||||||||| || || || | | ||| | | ||| ||||| |||||||||| |||
Sbjct 1074 TTCTAGATAGACCGTC-GA-G--TCCAGGAGATTTTTTCAAGAGCAAATCGGATTACGTC 1129
Query 1205 AAAAAACCAATACCCAAAA-AAGGTTTAGAGAAGCTTTGGAAGACAATGTTTAAATTCAA 1263
||||||||||| ||| ||| |||| | ||||||||||||||||||||||| ||||||||
Sbjct 1130 AAAAAACCAAT-CCCTAAAGAAGGACTGGAGAAGCTTTGGAAGACAATGTTGAAATTCAA 1188
Query 1264 CAGTAGC---GTCTCGTTGCAATTCAACCCTTACGGTGGAGTGATGGACCGGATTCCGGC 1320
|| || || | | ||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1189 CAATAATATTGTGTGGATGCAATTCAACCCATACGGTGGAGTGATGGACCGGATTCCTGC 1248
Query 1321 AACGGCCACCGCTTTTCCTCATCGGAAAGGAAACTTGTTCAAGGTTCAATACTCTACGAT 1380
||| ||||| || |||||||| ||||||||||||||||||||| ||||||||| |||||
Sbjct 1249 AACCGCCACAGCGTTTCCTCACCGGAAAGGAAACTTGTTCAAGATTCAATACTTTACGAC 1308
Query 1381 GTGGTTTGACGCAAACGCCACAGAGAGTAGCCTG-G-CTATGATGAATGAGCTTTTTGAG 1438
|||||| |||||||| ||||||||||||||||| | | | ||||| ||||||| |||
Sbjct 1309 ATGGTTTAACGCAAACACCACAGAGAGTAGCCTGAGTCAA--ATGAAGGAGCTTTACGAG 1366
Query 1439 GTGGCGGAACCGTACGTGTCAAGTAACCCGAGAGAGGCCTTCTTTAATTTCAGAGACATC 1498
|| || ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||
Sbjct 1367 GTTGCTGAACCGTACGTGTCAAGTAACCCTAGAGAGGCCTTCTTTAATTACAGAGATATC 1426
Query 1499 GATATTGGAAGCAATCCAAGTGGTGAGACAAACGTGGATGAAGCTAAGATCTACGGATCC 1558
||| ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1427 GATGTTGGAAGCAATCCGAGTGGTGAGACAAACGTTGATGAAGCTAAGATCTATGGATCC 1486
Query 1559 AAGTATTTCTTGGGGAATTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGAT 1618
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1487 AAGTATTTCTTGGGGAACTTGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGAG 1546
Query 1619 AATTTCTTCAAGAACGAGCAGAGTATTCCTCCGGTTCGTGTAAAGTAGTGATATTA 1674
||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||
Sbjct 1547 AATTTCTTCAAGAACGAACAGAGCATTCCTCCGGTTCGTGTAATGTAGTGATATTA 1602
> Ahg912411 jgi|Araly1|912411|Al_scaffold_0001_2665
Length=1368
Score = 754 bits (408), Expect = 0.0
Identities = 644/755 (85%), Gaps = 27/755 (4%)
Strand=Plus/Plus
Query 525 CGACATTGGGAGAGCTCTACGTAAAGATCAATGAGGCAAGCCAAACGCTAGCGTTCCCGG 584
|||| ||||||||||||||| ||||||||||||||| ||||||||| |||||||||| |
Sbjct 356 CGACCTTGGGAGAGCTCTACACAAAGATCAATGAGGCGAGCCAAACGTTAGCGTTCCCTG 415
Query 585 CTGGCGTGTGCCCTACGGTAGGAGCAGGG-GGACACATAAGCGGTGGAGGGTTTGGAAAT 643
||||||| |||||||||||||||| ||| || ||||||||||||||||| |||||||||
Sbjct 416 CTGGCGTTTGCCCTACGGTAGGAG-TGGGTGGGCACATAAGCGGTGGAGGATTTGGAAAT 474
Query 644 CTGATGAGAAAATTCGGAATCACAGTAGATCATGTCATTGACGCACAAATCATTGA-TGT 702
|||||| ||||||||||||||||||| |||||||| ||||| || || | ||| | ||
Sbjct 475 CTGATGCGAAAATTCGGAATCACAGTGGATCATGTTATTGATGCTCAGTTAATTAACTG- 533
Query 703 CAATGGCAAGCTCTTGA-ATCGAGCTGCCATGGGAGAAGATCTCTTTTGGGCGATTCGCG 761
||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||||
Sbjct 534 CAACGGCAAGCTCTT-AGATCGAGCTACCATGGGAGAAGATCTCTTTTGGGCGATTCGCG 592
Query 762 GTGGTGGT--T-CAAGTTTTGGAGTTATTCTATCTTGGAAAATCAACCTCGTGGAGGTTC 818
| |||||| | | ||||| |||||||| || |||||||||||||||||||| |||||||
Sbjct 593 GCGGTGGTGGTGCGAGTTTCGGAGTTATCCTCTCTTGGAAAATCAACCTCGTCGAGGTTC 652
Query 819 CAAAGATCCTGACAGTGTTTAAGGTTAACAAAACATTAGAACAAGGAGGCACTGATATTC 878
||||||| |||||||||||||||||| |||||||| |||||||||||||||||| |||
Sbjct 653 CAAAGATTCTGACAGTGTTTAAGGTTCGTAAAACATTGGAACAAGGAGGCACTGATGTTC 712
Query 879 TTTACAAGTGGCAGCTTGTCGCTAATAAACTACCTGATAG-TCTTTTCATAACAGCATGG 937
| ||||||||||||||||| ||| ||| | ||||| || ||||||||||| ||| |||
Sbjct 713 TCTACAAGTGGCAGCTTGTTGCTTCCAAATTTCCTGA-AGATCTTTTCATAAGAGCCTGG 771
Query 938 CCT-AGGACCGTAAATGGACCAAAACCCGGCGAGAGAACCGTCGCGGTTGTATTCTATGC 996
||| || | ||||| ||| |||||| |||| |||||||| ||||||||||||||| |||
Sbjct 772 CCTCAG-ATTGTAAAGGGAACAAAACTCGGCAAGAGAACCATCGCGGTTGTATTCTTTGC 830
Query 997 TCAGTTCTTGGGTCCAACAGATAAGCTGATGGAGATAATG-GACCAGAGCTTCCCTGAAT 1055
|||||| ||||||||||| ||||||||||||| ||||||| | ||||||||| ||||||
Sbjct 831 TCAGTTTTTGGGTCCAACCGATAAGCTGATGGCGATAATGAG-CCAGAGCTTGCCTGAAC 889
Query 1056 TAGGGTTAGGACGTGAAGATTGCCACGAAATGAGCTGGCTTAACACAACGTTGTTTTGGG 1115
||||| || ||||||| ||||| ||||||||||||||| || ||||||||||||||||||
Sbjct 890 TAGGGCTAAGACGTGATGATTGTCACGAAATGAGCTGGTTTTACACAACGTTGTTTTGGG 949
Query 1116 CCAATTACCCGGCGGGTACACCCAAGAGCATCCTTCTAGATAGGCC-TCCGACGAATTCA 1174
||||||| |||| || ||||| ||| || | ||||||||||| || || || | | ||
Sbjct 950 CCAATTATCCGGTTGGCACACCAAAGCGCGTTCTTCTAGATAGACCGTC-GA-G--TCCA 1005
Query 1175 GTGTCA-TTT---AAGAGTAAATCGGATTTTGTCAAAAAACCAATACCCAAAAAAGGT-T 1229
| | | ||| ||||| ||||||||| ||||||||||||| ||||||| ||| |
Sbjct 1006 G-GAGAATTTTTCAAGAGCAAATCGGATAACATCAAAAAACCAAT-CCCAAAAGAGGGAT 1063
Query 1230 TAGAGAAGCTTTGGAAGACAATGTTTAAATTCAAC 1264
| |||||| |||||||||||||||| ||||| |||
Sbjct 1064 TGGAGAAGATTTGGAAGACAATGTTGAAATTTAAC 1098
Score = 383 bits (207), Expect = 3e-105
Identities = 308/356 (87%), Gaps = 9/356 (3%)
Strand=Plus/Plus
Query 82 GAAAGAAACACTTTATGTTTTGGGTCTTGTTCTTCTT-GTTTC-GTTTATAGAAGCACCA 139
||||| | |||| | ||||||| ||||||||||| || ||||| |||| |||||||| ||
Sbjct 3 GAAAGCATCACTCTCTGTTTTGTGTCTTGTTCTT-TTGGTTTCGGTTT-TAGAAGCAGCA 60
Query 140 GT---GACAAAACCAAATTTTGGAAAGTTCATCGAATGCCTACGCGATCGGACTACTCCG 196
|| ||||||||||||| ||||| ||||||| |||||| ||| ||||||||| ||||
Sbjct 61 GTAACAACAAAACCAAATTCTGGAATTTTCATCGGATGCCTTCGCAATCGGACTAGTCCG 120
Query 197 GAGAATCCAATCACCGATGTCATCTCCATCGCCGATAATTCCACCACCTTCTTGTCTTCT 256
||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||
Sbjct 121 GAGAATCCAATCACCGATGCCATCTTCACCGCCGATAACACCACCACCTTCTTGTCTTCT 180
Query 257 TACGTGTCATACACGAAAAACAAGAGGTTCTCGAGCCCTAACTTCAAAAAACTACTAGCC 316
|||||||| ||||||| ||||||||||| |||||||||||||| | |||||||| |||||
Sbjct 181 TACGTGTCCTACACGAGAAACAAGAGGTACTCGAGCCCTAACTACCAAAAACTAATAGCC 240
Query 317 ATCATAGCGGCGAAACATGTATCTCATGTTCAGGCCACGGT-AGTCTGCGCAAAGTCCAA 375
||| ||||||| |||||||||||||||||||||||||| || | |||||||||| ||||
Sbjct 241 ATCGTAGCGGCAAAACATGTATCTCATGTTCAGGCCACTGTGA-TCTGCGCAAAAACCAA 299
Query 376 TGGTATCCAGCTCCGTATCCGAAGCGGTGGTCATGACAACGAGGGTTTTTCTTACA 431
||||| || ||||||||||||||||| ||||||||| |||| || | |||||||
Sbjct 300 CGGTATTCAACTCCGTATCCGAAGCGGAGGTCATGACTACGAAGGCCTCTCTTACA 355
Score = 307 bits (166), Expect = 2e-82
Identities = 236/269 (88%), Gaps = 7/269 (3%)
Strand=Plus/Plus
Query 1400 ACAGAGAGT-AGCCTGGCTATGATGAATGAGCTTTTTGAGGTGGCGGAACCGTACGTGTC 1458
||||||| | || || |||||||||| ||||||| || || |||| ||||||||||||
Sbjct 1105 ACAGAGAATAAG-ATGACTATGATGAAGGAGCTTTACGAAGTTGCGGGACCGTACGTGTC 1163
Query 1459 AAGTAACCCGAGAGAGGC-CTTCTTTAATTTCAGAGACATCGATATTGGAAGCAATCCAA 1517
|||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||| |
Sbjct 1164 AAGTAACCCGAGAGAGGCGC-TCTTAAATTTCAGAGACGTCGATATTGGAAGCAATCCGA 1222
Query 1518 GTGGTGAGACAAACGTGGATGAAGCTAAGATCTACGGATCCAAGTATTTCTTGGGGAATT 1577
|||||| | ||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 1223 GTGGTGTG---AACGTGGATGAAGCTAAGATCTATGGATACAAGTATTTCTTGGGGAATT 1279
Query 1578 TGAAGAGATTGATGGATGTTAAAGCTAAGTATGATCCTGATAATTTCTTCAAGAACGAGC 1637
| ||||||||||||||| |||||||||||| |||| |||| ||||||||||| ||||| |
Sbjct 1280 TAAAGAGATTGATGGATATTAAAGCTAAGTGTGATGCTGAGAATTTCTTCAAAAACGAAC 1339
Query 1638 AGAGTATTCCTCCGGTTCGTGTAAAGTAG 1666
|||||||| |||| | |||||||| ||||
Sbjct 1340 AGAGTATTTCTCCTGCTCGTGTAATGTAG 1368
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66238936055
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5