BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G27190.1
Length=2169
Score E
Sequences producing significant alignments: (Bits) Value
Ahg921505 jgi|Araly1|921505|scaffold_102786.1 3099 0.0
Ahg480045 jgi|Araly1|480045|fgenesh2_kg.3__2746__AT1G27190.1 1199 0.0
Ahg926301 jgi|Araly1|926301|scaffold_201862.1 1182 0.0
> Ahg921505 jgi|Araly1|921505|scaffold_102786.1
Length=1852
Score = 3099 bits (1678), Expect = 0.0
Identities = 1797/1855 (97%), Gaps = 5/1855 (0%)
Strand=Plus/Plus
Query 78 AACTAGATCCATCC-TTAATCATGAAGAAGATCTTCATCACACTCTTATGGCTTCTCTTC 136
||| |||||||||| || |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1 AACCAGATCCATCCATT-ATCATGAAGAAGATATTCATCACACTCTTATGGCTTCTCTTT 59
Query 137 ATAAGCTCGTTTCTCTGTTCTTCTTCTTCAGCTGAAGACGACGTTCTCTGTCTCCAAGGT 196
||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 60 ATAAGTTCCTTTCTCTGTTCTTCTTCTTCAGCTGAAGACGACGTTCTTTGTCTCCAAGGT 119
Query 197 TTGAAAAACTCACTCATCGATCCTTCTTCTAGACTCAGTTCCTGGTCTTTCCCAAACTCT 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 TTGAAAAACTCACTCATCGATCCTTCTTCTAGACTCAGTTCCTGGTCTTTCCCAAACTCT 179
Query 257 TCAGCTTCTTCGATTTGTAAGCTCACTGGTGTTTCCTGCTGGAACGAGAAAGAGAATCGG 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TCAGCTTCTTCGATTTGTAAGCTCACTGGTGTTTCCTGCTGGAACGAGAAAGAGAATCGG 239
Query 317 ATTATTTCTCTTCAGCTTCAATCGATGCAGCTCGCCGGTGAGATTCCTGAGTCTCTTAAG 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 ATTATTTCTCTTCAGCTTCAATCGATGCAGCTCGCCGGTGAGATTCCTGAGTCTCTTAAG 299
Query 377 CTTTGTCGTAGTTTACAATCTCTGGATCTCTCTGGAAACGATCTCTCTGGTTCGATTCCT 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 CTTTGTCGTAGTTTACAATCTCTGGATCTCTCTGGAAACGATCTCTCTGGTTCGATTCCT 359
Query 437 TCTCAAATCTGTTCGTGGCTTCCTTATCTCGTTACGTTAGATCTGTCTGGGAATAAGCTT 496
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 360 TCTCAAATCTGTTCTTGGCTTCCTTATCTAGTTACGTTAGATCTATCTGGGAATAAGCTT 419
Query 497 GGTGGTTCGATTCCGACTCAGATCGTTGAGTGTAAGTTCTTAAACGCTTTGATTCTGAGT 556
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 420 GGTGGTTCGATTCCTACTCAGATCGTTGAGTGTAAGTTCTTAAACGCTTTGATTTTGAGT 479
Query 557 GATAATAAGCTTTCTGGTTCGATTCCTTCTCAGTTGAGTCGATTAGATCGCCTTCGACGT 616
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 480 GATAATAAGCTTTCTGGTTCGATTCCTTCTCAGTTGAGTCGATTAGATCGGCTTCGACGT 539
Query 617 CTTTCTCTAGCAGGGAATGATCTCTCCGGTACGATTCCGTCCGAGCTGGCTCGGTTCGGA 676
|||||||| || || |||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 540 CTTTCTCTTGCTGGTAATGATCTCTCCGGTACGATTCCGTCTGAGCTGGCGCGGTTCGGA 599
Query 677 GGAGACGATTTTAGCGGGAATAACGGACTTTGTGGGAAGCCTTTATCGCGATGTGGAGCG 736
||||||||||||||||||||| |||||||||| |||||||| |||||| |||||||||||
Sbjct 600 GGAGACGATTTTAGCGGGAATGACGGACTTTGCGGGAAGCCGTTATCGAGATGTGGAGCG 659
Query 737 TTGAATGGGAGAAATCTGAGTATTATTATAGTTGCTGGAGTTCTTGGAGCTGTTGGATCT 796
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 660 TTGAATGGGAGAAATCTGAGTATTATTATAGTTGCTGGAGTTATTGGAGCTGTTGGATCT 719
Query 797 TTGTGCGTTGGTTTAGTTATATTCTGGTGGTTCTTTATTAGAGAAGGTAGTAGGAAGAAG 856
||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 720 TTGTGTGTTGGTTTAGTGATATTTTGGTGGTTCTTTATTAGAGAAGGTAGTAGGAAGAAG 779
Query 857 AAAGGTTATGGTGCTGGGAAGTCTAAGGATGATAGTGATTGGATTGGTTTGTTGAGGTCA 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 AAAGGTTATGGTGCTGGGAAGTCTAAGGATGATAGTGATTGGATTGGTTTGTTGAGGTCA 839
Query 917 CATAAGCTTGTTCAGGTGACTTTGTTTCAGAAACCTATTGTGAAGATTAAATTGGGTGAT 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 CATAAGCTTGTTCAGGTGACTTTGTTTCAGAAACCTATTGTGAAGATTAAATTGGGTGAT 899
Query 977 TTAATGGCTGCTACGAACAATTTTAGTTCAGGGAATATCGATGTTTCGTCGAGGACTGGG 1036
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TTAATGGCTGCTACGAATAATTTTAGTTCAGGGAATATCGATGTTTCGTCGAGGACTGGG 959
Query 1037 GTTTCGTATAAAGCGGATTTACCTGATGGGTCTGCACTTGCGGTGAAGAGGCTTAGTGCT 1096
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 960 GTTTCGTATAAAGCGGATTTACCTGATGGCTCTGCGCTTGCGGTGAAGAGGCTTAGCGCT 1019
Query 1097 TGTGGGTTTGGTGAGAAACAGTTTAGGTCGGAGATGAATAAGTTAGGAGAGCTTAGACAT 1156
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 1020 TGTGGGTTTGGTGAGAAACAGTTCAGGTCGGAGATGAATAGGTTAGGAGAGCTTAGACAT 1079
Query 1157 CCGAATTTGGTGCCGCTTTTAGGGTATTGTGTTGTGGAAGATGAGAGACTGTTGGTGTAT 1216
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1080 CCGAATTTGGTGCCGCTTTTAGGTTATTGTGTTGTGGAAGATGAGAGACTGTTGGTGTAT 1139
Query 1217 AAGCATATGGTTAATGGTACGTTGTTTTCTCAGTTGCACAATGGTGGATTGTGTGATGCT 1276
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 AAGCATATGCCTAATGGCACGTTGTTTTCTCAGTTGCACAATGGTGGATTGTGTGATGCT 1199
Query 1277 GTTTTGGATTGGCCGACTCGGCGTGCGATTGGTGTGGGAGCTGCTAAAGGGTTAGCTTGG 1336
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1200 GTTTTGGATTGGCCTACTCGGCTTGCGATTGGTGTGGGAGCTGCTAAAGGGTTAGCTTGG 1259
Query 1337 TTGCATCATGGATGCCAACCGCCGTATTTGCATCAGTTTATTAGCTCCAATGTTATACTT 1396
||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1260 CTGCATCATGGATGTCAACCACCGTATTTGCATCAGTTCATTAGCTCCAATGTTATACTT 1319
Query 1397 CTTGATGATGATTTTGATGCTCGGATAACAGATTACGGATTGGCAAAGCTAGTTGGATCT 1456
||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||
Sbjct 1320 CTTGATGATGATTTTGATGCTCGGATAACCGATTACGGTTTGGCAAGGCTAGTTGGATCT 1379
Query 1457 CGTGATTCGAACGATAGCTCGTTCAATAATGGGGATTTGGGGGAGTTAGGTTATGTAGCG 1516
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1380 CGTGATTCGAACGATAGCTCGTTCAATAATGGGGATTTGGGGGAGTTAGGTTATGTGGCG 1439
Query 1517 CCTGAGTATTCGAGCACCATGGTTGCGTCTTTGAAAGGAGATGTGTATGGGTTTGGGATT 1576
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1440 CCTGAGTATTCGAGCACCATGGTTGCATCTTTGAAAGGAGATGTGTATGGGTTTGGGATT 1499
Query 1577 GTGCTTCTTGAATTGGTTACAGGGCAAAAGCCTTTGTCTGTTATTAACGGTGTGGAAGGG 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 GTGCTTCTTGAATTGGTTACAGGGCAAAAGCCTTTGTCTGTTATTAACGGTGTGGAAGGG 1559
Query 1637 TTTAAAGGGAGTTTAGTTGACTGGGTGAGTCAGTATTTGGGTACTGGTAGAAGCAAAGAC 1696
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1560 TTTAAAGGGAGTTTAGTTGACTGGGTGAGTCAGTATTTGGGGACTGGTAGAAGTAAAGAC 1619
Query 1697 GCTATTGATAGAAGCATATGTGATAAAGGACACGATGAGGAGATATTGCAGTTCCTGAAA 1756
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1620 GCTATTGATAGAAGCATATGTGATAAAGGACACGATGAGGAGATATTGCAGTTCTTGAAA 1679
Query 1757 ATCGCATGTAGCTGTGTTGTGTCCAGGCCTAAGGAAAGGCCAACGATGATTCAGGTGTAT 1816
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1680 ATCGCATGTAGCTGTGTTGTGTCCAGGCCTAAAGAAAGGCCAACGATGATTCAGGTGTAT 1739
Query 1817 GAATCTTTGAAGAACATGGCAGATAAACACGGTGTTTCGGAGCATTACGATGAATTTCCT 1876
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1740 GAATCTTTGAAGAGCATGGCAGATAAACACGGTGTTTCTGAGCATTACGATGAATTTCCA 1799
Query 1877 CTGGTCTTCAACAAACAAGAAGCTT-GAGTATCTTTACCAGAAAGTAGTCTTTTT 1930
||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||
Sbjct 1800 CTGGTCTTCAACAAACAAGAA-CTTTGAGTATCTT-ACCAGAAAGTAGTCTTTTT 1852
> Ahg480045 jgi|Araly1|480045|fgenesh2_kg.3__2746__AT1G27190.1
Length=1937
Score = 1199 bits (649), Expect = 0.0
Identities = 719/753 (95%), Gaps = 3/753 (0%)
Strand=Plus/Plus
Query 1218 AGCATATGGTTAATGGTACGTTGTTTTCTCAGTTGCACAATGGTGGATTGTGTGATGCTG 1277
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1188 AGCATATGCCTAATGGCACGTTGTTTTCTCAGTTGCACAATGGTGGATTGTGTGATGCTG 1247
Query 1278 TTTTGGATTGGCCGACTCGGCGTGCGATTGGTGTGGGAGCTGCTAAAGGGTTAGCTTGGT 1337
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1248 --TTGGATTGGCCGACTCGGCTTGCGATTGGTGTGGGAGCTGCTAAAGGGTTAGCTTGGC 1305
Query 1338 TGCATCATGGATGCCAACCGCCGTATTTGCATCAGTTTATTAGCTCCAATGTTATACTTC 1397
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1306 TGCATCATGGATGCCAACCGCCGTATTTGCATCAGTTCATTAGTTCCAATGTTATACTTC 1365
Query 1398 TTGATGATGATTTTGATGCTCGGATAACAGATTACGGATTGGCAAAGCTAGTTGGATCTC 1457
|||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||
Sbjct 1366 TTGATGATGATTTTGATGCTCGGATAACGGATTACGGTTTGACAAGGCTAGTTGGATCTC 1425
Query 1458 GTGATTCGAACGATAGCTCGTTCAATAATGGGGATTTGGGGGAGTTAGGTTATGTAGCGC 1517
| ||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1426 GCGATTCTAGCGATAGCTCGTTCAATAATGGGGATTTGGGGGAGTTAGGTTATGTGGCGC 1485
Query 1518 CTGAGTATTCGAGCACCATGGTTGCGTCTTTGAAAGGAGATGTGTATGGGTTTGGGATTG 1577
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1486 CTGAGTATTCGAGCACCATGGTTGCATCTTTGAAAGGAGATGTGTATGGGTTTGGAATTG 1545
Query 1578 TGCTTCTTGAATTGGTTACAGGGCAAAAGCCTTTGTCTGTTATTAACGGTGTGGAAGGGT 1637
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 1546 TACTTCTTGAATTTGTTACTGGGCAAAAGCCTTTATCTGTTATTAACGGTGTGGAAGGGT 1605
Query 1638 TTAAAGGGAGTTTAGTTGACTGGGTGAGTCAGTATTTGGGTACTGGTAGAAGCAAAGACG 1697
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1606 TTAAAGGGAGTTTAGTTGACTGGGTGAGTCAGTATTTGGGGACTGGTAGAAGCAAAGACG 1665
Query 1698 CTATTGATAGAAGCATATGTGATAAAGGACACGATGAGGAGATATTGCAGTTCCTGAAAA 1757
||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||
Sbjct 1666 CTATTGATAGAAGCATATGTGTTAAAGGACACGATGAGGAGATATTGCAATTCTTGAAAA 1725
Query 1758 TCGCATGTAGCTGTGTTGTGTCCAGGCCTAAGGAAAGGCCAACGATGATTCAGGTGTATG 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1726 TCGCATGTAGCTGTGTTGTGTCCAGGCCTAAGGAAAGGCCAACGATGATTCAGGTGTATG 1785
Query 1818 AATCTTTGAAGAACATGGCAGATAAACACGGTGTTTCGGAGCATTACGATGAATTTCCTC 1877
||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
Sbjct 1786 AATATTTGAAGAACATGGCGGATAAACACGGTGTTTCTGAGCATTACGATGAATTTCCAC 1845
Query 1878 TGGTCTTCAACAAACAAGAAGCTTGAGTATCTTTACCAGAAAGTAGTCTTTTTTGGCAGC 1937
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 1846 TGGTCTTCAACAAACAAGAACCTTGAGTATCTT-ACCAGAAAGTAGTCTTTTTTGGCAGC 1904
Query 1938 TTAAGCGCTAAGAAGGTATGAGAAATCTACTTT 1970
||||||||||| |||||||||||||||||||||
Sbjct 1905 TTAAGCGCTAAAAAGGTATGAGAAATCTACTTT 1937
Score = 909 bits (492), Expect = 0.0
Identities = 583/626 (93%), Gaps = 10/626 (2%)
Strand=Plus/Plus
Query 560 AATAAGCTTTCTGGTTCGATTCCTTCTCAGTTGAGTCGATTAGATC-GCCTTCGACGTCT 618
||||||||| ||||||||||||| ||||| | || || | || | |||||||||||
Sbjct 567 AATAAGCTTGGTGGTTCGATTCCTACTCAGAT-CGTTGAGTCTTTCTG-CTTCGACGTCT 624
Query 619 TTCTCTAGCAGGGAATGATCTCTCCGGTACGATTCCGTCCGAGCTGGCTC---GG-TTCG 674
|||||| || |||||||||||||||||| ||||||| ||||||||||| | || ||||
Sbjct 625 TTCTCTTGCTGGGAATGATCTCTCCGGTGCGATTCCTTCCGAGCTGGCGCGGTGGATTCG 684
Query 675 GAGGAGACGATTTTAGCGGGAATAACGGACTTTGTGGGAAGCCTTTATCGCGATGTGGAG 734
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct 685 GAGGAGACGATTTTAGCGGGAATAACGGACTTTGCGGGAAGCCTTTATCGAGATGTGGTG 744
Query 735 CGTTGAATGGGAGAAATCTGAGTATTATTATAGTTGCTGGAGTTCTTGGAGCT-GTTGGA 793
||||||||||||||||| ||||||||||||| | |||||||||| |||| | | ||||||
Sbjct 745 CGTTGAATGGGAGAAATTTGAGTATTATTATTGCTGCTGGAGTTATTGGTG-TCGTTGGA 803
Query 794 TCTTTGTGCGTTGGTTTAGTTATATTCTGGTGGTTCTTTATTAGAGAAGGTAGTAGGAAG 853
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 804 TCTTTGTGTGTTGGTTTAGTGATATTTTGGTGGTTCTTTATTAGAGAAGGTAGTAGGAAG 863
Query 854 AAGAAAGGTTATGGTGCTGGGAAGTCTAAGGATGATAGTGATTGGATTGGTTTGTTGAGG 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 864 AAGAAAGGTTATGGTGCTGGGAAGTCTAAGGATGATAGTGATTGGATTGGTTTGTTGAGG 923
Query 914 TCACATAAGCTTGTTCAGGTGACTTTGTTTCAGAAACCTATTGTGAAGATTAAATTGGGT 973
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 924 TCACATAAGCTTGTTCAGGTGACTTTGTTTCAGAAGCCCATTGTGAAGATTAAATTGGGT 983
Query 974 GATTTAATGGCTGCTACGAACAATTTTAGTTCAGGGAATATCGATGTTTCGTCGAGGACT 1033
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 984 GATTTAATGGCTGCTACGAATAATTTTAGTTCAGGGAATATCGATGTTTCGTCGAGGACT 1043
Query 1034 GGGGTTTCGTATAAAGCGGATTTACCTGATGGGTCTGCACTTGCGGTGAAGAGGCTTAGT 1093
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1044 GGGGTTTCGTATAAAGCGGATTTACCTGATGGGTCTGCGCTTGCGGTGAAGAGGCTTAGC 1103
Query 1094 GCTTGTGGGTTTGGTGAGAAACAGTTTAGGTCGGAGATGAATAAGTTAGGAGAGCTTAGA 1153
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 1104 GCTTGTGGGTTTGGTGAGAAACAGTTCAGGTCGGAGATGAATAGGTTAGGAGAGCTTAGA 1163
Query 1154 CATCCGAATTT-GGTGCCGCTTTTAG 1178
||||||||||| ||||||||||||||
Sbjct 1164 CATCCGAATTTTGGTGCCGCTTTTAG 1189
Score = 523 bits (283), Expect = 2e-147
Identities = 303/312 (97%), Gaps = 4/312 (1%)
Strand=Plus/Plus
Query 78 AACTAGATCCATCC-TTAATCATGAAGAAGATCTTCATCACACTCTTATGGCTTCTCTTC 136
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AACTAGATCCATCCATT-ATCATGAAGAAGATCTTCATCACACTCTTATGGCTTCTCTTT 59
Query 137 ATAAGCTCGTTTCTCTGTTCTTCTTCTTCAGCTGAAGACGACGTTCTCTGTCTCCAAGGT 196
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 60 ATAAGCTCGTTTCTCTGTTCTTCTTCTTCAGCTGAAGACGACGTTCTTTGTCTCCAAGGT 119
Query 197 TTGAAAAACTCACTCATCGATCC-TTCTTCTAGACTCAGTTCCTGGTCTTTCCCAAACTC 255
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 120 TTGAAAAACTCACTCATCGATCCATT-ATCTAGACTCAGTTCCTGGTCTTTCCCAAACTC 178
Query 256 TTCAGCTTCTTCGATTTGTAAGCTCACTGGTGTTTCCTGCTGGAACGAGAAAGAGAATCG 315
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 179 TTCAGCTTCTTCGATTTGCAAGCTCACTGGTGTTTCGTGCTGGAACGAGAAAGAGAATCG 238
Query 316 GATTATTTCTCTTCAGCTTCAATCGATGCAGCTCGCCGGTGAGATTCCTGAGTCTCTTAA 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 GATTATTTCTCTTCAGCTTCAATCGATGCAGCTCGCCGGTGAGATTCCTGAGTCTCTTAA 298
Query 376 GCTTTGTCGTAG 387
||||||||||||
Sbjct 299 GCTTTGTCGTAG 310
Score = 159 bits (86), Expect = 6e-38
Identities = 94/98 (96%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 430 GATTCCTTCTCAAATCTGTTCGTGGCTTCCTTATCTCGTTACGTTAGATCTGTCTGGGAA 489
||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 509 GATTCCTTCTCAAATCTGTTCTTGGCTTCCCTATCTCGTTACGTTAGATCTATCTGGGAA 568
Query 490 TAAGCTTGGTGGTTCGATTCCGACTCAGATCGTTGAGT 527
||||||||||||||||||||| ||||||||||||||||
Sbjct 569 TAAGCTTGGTGGTTCGATTCCTACTCAGATCGTTGAGT 606
> Ahg926301 jgi|Araly1|926301|scaffold_201862.1
Length=1837
Score = 1182 bits (640), Expect = 0.0
Identities = 1414/1777 (80%), Gaps = 95/1777 (5%)
Strand=Plus/Plus
Query 170 GAAGACGACGTTCTCTGTCTCCAAGGTTTGAAAAAC-TCACTCATCGATCCTTC--TTCT 226
||||||||| | ||||||||| |||| || |||| | ||||||| |||||||| ||
Sbjct 75 GAAGACGACATACTCTGTCTCAAAGGCTT-AAAATCTTCACTCAAAGATCCTTCAAATC- 132
Query 227 AGACTCAGTTCCTGGTCTTTCCCAAACTC-T--TCAGCTTCTTCGATTTGTAAGCTCACT 283
| ||||| | ||||||||||| ||||| | ||| | || ||||||| || |||||
Sbjct 133 A-ACTCAACACTTGGTCTTTCCCTAACTCATCATCATCATCGCCGATTTGCAAACTCACC 191
Query 284 GGTGTTTCCTGCTGGAACGAGAAAGAGAATCGGATTATTTCTCTTCAGCTTCAATCGATG 343
|| ||||| |||||||||| ||||||||||||||| | ||||||||||||||||| |||
Sbjct 192 GGAGTTTCTTGCTGGAACGCTAAAGAGAATCGGATTCTCTCTCTTCAGCTTCAATCAATG 251
Query 344 CAGCTCGCCGGTGAGATTCCTGAGTCTCTTAAGCTT-TGTCGTAGTTTACAATCTCTGGA 402
|| ||| | ||| | |||||||| ||||||||| || ||||| |||||||||||| | ||
Sbjct 252 CAACTCTCTGGTCAAATTCCTGAATCTCTTAAG-TTATGTCGGAGTTTACAATCTTTAGA 310
Query 403 TCTCTCTGGA-AACGATCTCTCTGGTTCGATTCCTTCTCAAATCTGTTCGTGGCTTCCTT 461
||| || || |||||| |||| |||| ||||||||| ||||||||||| ||||||||||
Sbjct 311 TCTTTC-CGATAACGATTTCTCCGGTTTGATTCCTTCACAAATCTGTTCATGGCTTCCTT 369
Query 462 ATCTCGTTACG-TTAGATCTGTCTGGGAATAAGCTTGGTGGTTCGATTCCGACTCAGATC 520
|||| |||| | |||||||| || || || || ||| |||||||| ||| ||||||||
Sbjct 370 ATCTTGTTA-GTTTAGATCTCTCCGGTAACAAACTTTCCGGTTCGATACCGTCTCAGATC 428
Query 521 GTTGAGTGTAAGTTCTTAAAC-GCTTTGA-TTCTGAGTGATAATAAGCTT-TCTGGTTCG 577
||||| ||||| ||||||||| | ||| | |||| | ||| || || || | ||||||
Sbjct 429 GTTGACTGTAAATTCTTAAACAG-TTT-AGTTCTTAATGACAACAA-ATTAACCGGTTCG 485
Query 578 ATTCCTTCTCAGTTGAGTC-GATTAGATCGCCTTC-GACGTCTTTCTCTAGCAGGGAATG 635
||||||||| | || | | | ||| | || | || | || ||||||||||| | ||||
Sbjct 486 ATTCCTTCTGAATT-AACCGGTTTAAACCGTC-TCGGGCGACTTTCTCTAGCTGATAATG 543
Query 636 ATCTCTCCGGTACGATTCCGTCCGAGCTGGCTCGGTTCGGAGGAGACGATTTTAGCGGGA 695
||||||| ||| ||||||| |||||||| ||| ||||||| ||||| |||| |||| |
Sbjct 544 ATCTCTCTGGTTCGATTCCCTCCGAGCTATCTCATTTCGGAGAAGACGGTTTTCGCGGTA 603
Query 696 ATAACGGACTTTGTGGGAAGCCTTTATCGCG-A-TGTGGAGCGTTGAATGGGAGAAATC- 752
|| ||||||||| || ||||| ||| | | | || || ||||||| || | ||| |
Sbjct 604 ATGGCGGACTTTGCGGTAAGCCGTTA-C-AGAATTGCGGTTCGTTGAACGGTA-AAAACT 660
Query 753 TGA-GTATTATTATAGTTGCTGGAGTTCTTGGAGCTGTTGGATCTTTGTGCGTTGG-TTT 810
| | | || ||| || ||||||||||| |||| |||||||| || ||||| |||| |||
Sbjct 661 TAACG-ATCATTGTAATTGCTGGAGTTATTGGGGCTGTTGGGTCGTTGTGTATTGGATTT 719
Query 811 AGTTATATTCTGGTGGTTCTTTATTAGAGA-AGGTAGTAGGAAGA------A--G-AAAG 860
| || || |||||||| ||||| ||||| ||| || | ||||| | | | |
Sbjct 720 -GGGATGTTTTGGTGGTTTTTTATCAGAGACAGG-AGGAAGAAGAGTGGTTACGGTTACG 777
Query 861 GTTATGGTGCTGGGAAGTCTAAGGATGATAGTGATTGGATTGGTTTGTTGAGGTCACATA 920
||||||| || || || |||| |||||||||||||||||||||||||||||| |||||||
Sbjct 778 GTTATGGCGCCGGAAAATCTAGGGATGATAGTGATTGGATTGGTTTGTTGAGATCACATA 837
Query 921 AGCTTGTTCAGGTGACTTTGTTTCAGAAACCTATTGTGAAGATTAAATTGGGTGATTTAA 980
||||||||||||| ||| |||||||||| || |||||||||||||| |||| |||| |||
Sbjct 838 AGCTTGTTCAGGTTACTCTGTTTCAGAAGCCAATTGTGAAGATTAAGTTGGCTGATCTAA 897
Query 981 TGGCT-GCTACGAACAATTTT-AGTTCAGGGAATATCGATGTTTCGTCGAGGACTGGGGT 1038
| | | |||||||||||||| | ||||| ||||| | |||||||||||||||||||||
Sbjct 898 TTG-TAGCTACGAACAATTTCGA-TTCAGATAATATTGTTGTTTCGTCGAGGACTGGGGT 955
Query 1039 TTCGTATAAAGCGGATTTACCTGATGGGTCTGCACTTGC-GGTGAAGAGGCTTAGT-GC- 1095
||| || ||||| |||||||||||||||||| || ||| ||| |||||||||||| |
Sbjct 956 TTCTTACAAAGCTGATTTACCTGATGGGTCTACA-TTGGAGGTTAAGAGGCTTAGTAGTG 1014
Query 1096 -TTGTGGGTTTGGTGAGAAACAGTTTAGGTCGGAGATGAATAAGTTAGGAGAGCTTAGAC 1154
||||| | || ||||||||||||| ||||| ||||| || |||||||| || | || |
Sbjct 1015 GTTGTGAGCTTAGTGAGAAACAGTTCAGGTCTGAGATTAACAAGTTAGGTCAGATCAGGC 1074
Query 1155 ATCCGAATTTGGTGCCGCTTTTAGGGTATTGTGTTGTGGAAGATGAGAGACTGTTGGTGT 1214
||||||||||||| |||||| | |||| ||| ||||||||||| |||| | |||||||||
Sbjct 1075 ATCCGAATTTGGTTCCGCTTCTCGGGTTTTGCGTTGTGGAAGACGAGATATTGTTGGTGT 1134
Query 1215 ATAAGCATATGGTTAATGGTACGTTGTTTTCTCAG-TTGCA-CAATGGTGGATTGTGTGA 1272
|||||||||||| |||||| || |||| ||||||| || || ||| || | | |
Sbjct 1135 ATAAGCATATGGCTAATGGGACATTGTATTCTCAGCTT-CAGCAACGG-G-AC------A 1185
Query 1273 TGCTGTTTTGGATTGGCCGACTCGGCGTGCGATTGG-TGTGGGAGCTGCTAAAGGGTTAG 1331
| || ||||||| ||||| || || | | ||| ||||| |||| |||| |||
Sbjct 1186 T--TG------ATTGGCCAACTCGT-GTTAGAATCGCTGTTGGAGCGGCTAGAGGGCTAG 1236
Query 1332 CTTGGTTGCATCATGGATGCCAACCGCCGTATTTGCATCAGTTTATTAGCTCCAATGTTA 1391
|||||||||| |||||||| ||||| ||||| ||||||| | |||||||| ||||| |
Sbjct 1237 CTTGGTTGCACCATGGATGTCAACCATCGTATATGCATCAATACATTAGCTCAAATGTGA 1296
Query 1392 TACTTCTTGATGATGATTTTGATGCTCG-GATAACAGATTACGGATTGGCAAAGCTAGT- 1449
| |||||||| || ||||| |||||||| | || |||||||| |||| ||| ||||
Sbjct 1297 TTCTTCTTGACGAAGATTTCGATGCTCGTGTTATT-GATTACGGTTTGGGGAAGTTAGTG 1355
Query 1450 TGGATCTCGTGATTCGAACGATAGCTCGTTCAATAATGGGGATTTGGGGGAGTTAGGTTA 1509
|| ||||| ||||| || ||||||||||| | ||| || || || |||||||| |||||
Sbjct 1356 TGT-TCTCGGGATTCTAAAGATAGCTCGTTTAGTAACGGCGAGTTAGGGGAGTTGGGTTA 1414
Query 1510 TGTAGCGCCTGAGTATTCGAGCACCATGGTTGCGTCTTTGAAAGGAGATGTGTATGGGTT 1569
|| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 1415 CGTTGCGCCTGAGTATTCGAGCATTATGGTTGCGTCTTTGAGTGGAGATGTGTATGGGTT 1474
Query 1570 TGGGATTGTGCTTCTTGA-ATTGGTTACAGGGCAAAAGCCT-TTGTCTG-TTATTAACGG 1626
||||||||| |||||||| |||| ||||||| ||||||||| || || | ||| | |||
Sbjct 1475 TGGGATTGTACTTCTTGAGATTG-TTACAGGACAAAAGCCTGTT-TC-GATTAACATCGG 1531
Query 1627 TGTGGAAGGGTTTAAAGG-GAGTTTAGTTGACTGGGTGAGTCAGTATTTGGGTACTGGTA 1685
| ||||||||||| || ||||||||| || ||||||||| || ||||| ||| |||||
Sbjct 1532 CGAAGAAGGGTTTAA-GGAGAGTTTAGTGGAGTGGGTGAGTAAGCATTTGAGTAATGGTA 1590
Query 1686 GAAGCAAAGACGCTATTGATAGAAGCATATGTGATAAAGGACACGATGAGGAGATATTGC 1745
|||||||||| ||||||||||||||||| |||| ||||||| | ||||| |||||| |||
Sbjct 1591 GAAGCAAAGATGCTATTGATAGAAGCATTTGTGGTAAAGGATATGATGATGAGATAGTGC 1650
Query 1746 A-GTTCCTGAAAATCGCATGTAGCTGTGTTGTGTCCAGGCCTAAGGAAAGGCCAACGATG 1804
| ||| ||| |||||| |||||||| ||||| || |||||||| ||||| || ||||
Sbjct 1651 AAGTTT-TGAGAATCGCGTGTAGCTGCGTTGTATCGAGGCCTAAAGAAAGACCGTTGATG 1709
Query 1805 ATTCAGGTGTATGAATCTTTGAAGAACATGGCAGATAAACACGGTGT-TTCG--GAGCAT 1861
|| || || ||||||||||| ||||| ||| |||| |||| ||| | ||| ||| ||
Sbjct 1710 ATCCAAGTTTATGAATCTTTAAAGAATTTGGGAGATCAACATGGTTTCTTCTCTGAGTAT 1769
Query 1862 TA-CGATGAATTTCCTCTGGTCTTCAACAAACAAGAA 1897
| |||||| ||||| || |||| ||||||||||||
Sbjct 1770 -AGCGATGAGTTTCCACTCATCTTTAACAAACAAGAA 1805
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81627395035
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5