BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G27750.1 Length=3476 Score E Sequences producing significant alignments: (Bits) Value Ahg912607 jgi|Araly1|912607|Al_scaffold_0001_2861 3681 0.0 Ahg932978 jgi|Araly1|932978|scaffold_400966.1 451 1e-125 Ahg932460 jgi|Araly1|932460|scaffold_400448.1 364 2e-99 Ahg343965 jgi|Araly1|343965|fgenesh1_pg.C_scaffold_4000307 324 3e-87 Ahg931233 jgi|Araly1|931233|scaffold_303690.1 318 1e-85 Ahg347303 jgi|Araly1|347303|fgenesh1_pg.C_scaffold_5000695 318 1e-85 Ahg338589 jgi|Araly1|338589|fgenesh1_pg.C_scaffold_2000688 307 3e-82 Ahg932977 jgi|Araly1|932977|scaffold_400965.1 148 2e-34 > Ahg912607 jgi|Araly1|912607|Al_scaffold_0001_2861 Length=5517 Score = 3681 bits (1993), Expect = 0.0 Identities = 2162/2246 (96%), Gaps = 2/2246 (0%) Strand=Plus/Plus Query 41 ATGGCTTGCGCCGAGCAGCCTATCAAAAAGCGTCGTCTGTATGAGTCAATCCCTGAATCT 100 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct 1 ATGGCTTGCGCCGAGCAGCCCATCAAAAAGCGTCGGCTGTATGAGTCAATCCCTGAATCT 60 Query 101 CACCCTCCGCCACCACCGCAACTAGAATCCCAATCCCCTTCTACGGTGGTAAGCTCGTTC 160 || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 61 CAGCCTCCGCCACCACCGCAACCAGAATCCCAATCCCCTTCTACGGTGGTAAGCTCGTTC 120 Query 161 CCGGCTCCGGTGACACCGTCGCCTCCATCTCAGGAGGAAATTCAAACGAGAAGTAGGAAC 220 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 121 CCGGCTCCGGTGACTCCGTCGCCTCCATCTCAGGAGGAAATTCAAACGAGAAGCAGGAAC 180 Query 221 AGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTTAAATCTTGTGTTGCTCAG 280 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 181 AGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTTAAATCTTGTATTGGTCAG 240 Query 281 AGAGATGGTGGCGGCCGCTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCT 340 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AGAGATGGCGGCGGCCGCTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCT 300 Query 341 TCCAGAGGTTGTACTAGCGTTAAGCGCCTTGTGGCTGATCTCGTTCCTCGATATGCATTG 400 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 301 TCCAGAGGTTGTACTAGCGTAAAGCGCCTTGTGGCTGATCTCGTTCCTCGATATGCACTG 360 Query 401 TACTGTCCTACGGCTATTGGAGATGCAGTGCAAGCTGTTATTGACATGCATAACTTCAGC 460 ||||||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct 361 TACTGTCCTACTGCTATCGCAGATGCAGTGCAAGCTGTTATCGACATGCATAACTTCAGC 420 Query 461 TTGGAAGCTTTAAAGAGAGGACAAGATGCTGATGGTGTTGCTTTTCAAACTGCTAAAGCC 520 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TTAGAAGCTTTAAAGAGAGGACAAGATGCTGATGGTGTTGCTTTTCAAACTGCTAAAGCC 480 Query 521 TGCATATTTGGTCTAGTTGACCTATGTTCTGCTGCTTTATCGAAGAAAACGTCATCACCA 580 |||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct 481 TGCATATTTGGTCTAGTTGATCTATGTTCTGCTGCTTTATCAAAGAAAACTTCATCACCC 540 Query 581 GGGGCTCGAGATATCTGCTCTGCCGTGTTCAGAAATGTGTTAACCTTCTTTGTGCTTTCT 640 |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 541 GGGGCTCGTGAAATCTGCTCTGCTGTGTTCAGAAATGTGTTAACCTTCTTTGTGCTGTCC 600 Query 641 TTTGAGGGGAAAAATATCTTCCAGATAGTTGATAAGAGCGATTTGAAGTTGCAAGATCCT 700 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 601 TTTGAGGGGAAAGATATCTTCCAGATAGTTGATAAGAGCGATTTGAAGGTGCAAGATCCT 660 Query 701 GACGAAATTTTTTCTCAGCTGATGCAAAAACTTTCAGATGGAAACTCGTTACCTTTGATC 760 || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 661 GATGAATTTTTTTCTCAGCTGATGCAAAAAATTTCAGATGGAAACTCGTTACCTTTGATC 720 Query 761 AAATTATCCCAGTTTCGTGTTTTAGCTTTACTGAAAGTATTCTTCAACTTCCCTAAAAAA 820 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 721 AAACTATCCCAGTTTCGTGTTTTAGCTTTAATGAAAGTATTCTTCAACTTCCCTAAAAAA 780 Query 821 TCAATTGCCACTTGTTTCGGATTCTTCAATTCTTCATCCACGGAGGATGTAGCAACGGGG 880 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 781 TCAATTGCCACTTGTTTCGGATTCTTCAATTCTTCATCAACGGAGGATGTAGCCACGGGG 840 Query 881 AGGTATCTCATTACTCATATGACAGAAAAGATTAATGATATTGATGCCGCTAGTATTGAA 940 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||| Sbjct 841 AGGTATCTCATTACTCAGATGACAGAAAAGATTAATGATATTGATGCTGCTAGTAATGAA 900 Query 941 CCTGAAGTAGACGAGAATTCTGGTCAGACAGGTTCTAACAATATAGAGGCTACTGGTAAG 1000 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 CCTGAAGTAGACGAGAATTCTGGTCAGACAGGTTCTAACAATATAGAGGCTACTGGTAAG 960 Query 1001 AATGCAGAAGGGTTGAATGGTGTACAAGAAGCATCAAACAGTCTAACGAGCTGCTTGTTA 1060 || ||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||| Sbjct 961 AACGCAGAAGGGTTGAATGGGGTCCAAGAAGCATCCAACAGTCTAACGAGCTGCTTATTA 1020 Query 1061 GAAATGGTTATTAGGAAGAGTTCCTCCATTGGTAGGTGGGCCTTCTTTCAGTATAAGAAA 1120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 GGAATGGTTATTAGGAAGAGTTCCTCCATTGGTAGGTGGGCCTTCTTTCAGTATAAGAAC 1080 Query 1121 ATATGCAGCCTGTCATCCTTCGTGGATATATCCAGTGCTGTTAC-TTCTCTAGAGGGAAT 1179 ||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||| Sbjct 1081 ATATGCAGCCTGTCATCCTTCGTGGATATATCCAGTGCTATT-CTTTCTGTAGAGGGAAT 1139 Query 1180 CTTTGGATTTGTTGGAAAAAATATCAAGTTAGAAGATTGTCAAATGGACAGTGACGAGGA 1239 ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| Sbjct 1140 CTTTGGATTTGTTGGAAAAGATATCAAGTTAGAAGATTGCCAAATGGAGAGTGACGAGGA 1199 Query 1240 TGATTATGGAAAATTTTCAGTTTCACATGTGAAACCTCACAGTTCTGCAGACAATGATGT 1299 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1200 TGATTATGGAAAATTTTCGGTTTCACATGTGAAACCCCACAGTTCTGCAGACAATGATGT 1259 Query 1300 CCGCTCTAGTGCTGGATCGGTTTATGATGCTGGAGGTTCACGATCTATGGATTTTGAGAC 1359 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1260 CCGCTCAAGTGCTGGATCGGTTTATGATGCTGGAGGTTCACGATCTATGGATTTTGAGAC 1319 Query 1360 TGTTGACCAGAGAGACTTGTCATGTGGTAGATCTTCAGTCCCAAGGGGATTATTAAACCA 1419 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1320 TGTTGACCAGAGGGACTTGTCATGTGGTAGATCTTCAGTCCCAAGGGGATTAATAAACCA 1379 Query 1420 GCATACACCATCTCCTTCTGCAAGAGGGCCTTCAGATTTAAGAAGTAACTCTACGGATCG 1479 |||||||||||||||||||| || |||||||| ||| |||| ||||||||| ||||| Sbjct 1380 TCATACACCATCTCCTTCTGCTAGGGGGCCTTCTGATGTAAGGAGTAACTCTGTGGATCA 1439 Query 1480 TAGGAACAATTTTGTTCTTGCAGGATCACCTGTTTATCAGGCAGTACCCCATGGCCCTTC 1539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1440 TAGGAACAATTTTGTTCTTGCAGGATCACCTGTTTATCAGGCAGTACCCCATGGCCCTTC 1499 Query 1540 ATCAGGGCAAATTGCTTGGTATTTGGATGGGGACCCCACTGCTTTTGACATTTTTCCGGC 1599 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1500 ATCAGGGCAAATTGTTTGGTATTTGGATGGGGACCCCACTGCTTTTGACATTTTTCCGGC 1559 Query 1600 TTCGGGGCAGTTGTGGTTAGGCTATTTAGGACCAGATGAAACAGAAGGTCATCTAAGGTT 1659 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 1560 TTCGGGGCAGTTGTGGTTAGGCTATTTAGGACCAGATGAGACTGAAGGTCATCTAAGGTT 1619 Query 1660 TCAGCTTGACAGGTACGGCCCTGTAGACCGTTTCTTTTTTGATCCAGTGAAAGGATTTGC 1719 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1620 TCAGCTTGATAGGTACGGCCCAGTAGACCGTTTCTTTTTTGATCCAGTGAAAGGATTTGC 1679 Query 1720 TCTAGCAGAATATAGAAGCATAATTGATGCAATCAGAGCTCGAGAATATCTGCGAGCGCA 1779 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1680 CCTAGCAGAATATAGAAGTATAATTGATGCAATCAGAGCTCGAGAATATCTGCGAGCGCA 1739 Query 1780 ATTTCCTTGGCGCATTAAATTTATGGATATAGGAGTGGGTGCAAGGGGATCTTTGAATGG 1839 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1740 ATTTCCTTGGCGCATTAAATTCATGGATATAGGAGTTGGTGCAAGGGGATCTTTGAATGG 1799 Query 1840 AGTAGCATATGGTTATTGTACTCATCTGTATATTGGAGGCATCAGTAGCCAGTGGGAGAG 1899 ||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 1800 AGTGGCATATGGTTATTGTACTCATTTGTATATTGGAAGCATCAGTAGCCAGTGGGAGAG 1859 Query 1900 GGATGAAATTGTCCATGAGTCGCGGCAAGCCCTTTATAAGGGGCCTCGCATGGTGACTGA 1959 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1860 GGATGAAATTGTCCATGAGTCGCGGCAAGCCCTTTATAAGGGGCCTCGCATGGTGACTGA 1919 Query 1960 CCTGTACTATGAACATGCCCTTCTGATGGAGTTTGATACACCTGATGATGCTGCAATTGT 2019 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct 1920 CCTGTACTATGAACATGCCCTTCTGATGGAGTTTGATTCACCTGATGATGCTGCCATTGT 1979 Query 2020 AATGGCCCATCTCAGGTTTTTTCGGGGAGAAAAGAGTAAATTTCATTTGGCATCAATCAA 2079 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1980 AATGGCCCATCTCAGGTTTTTTCGCGGAGAAAAGAGTAAATTTCATTTGGCATCAATCAA 2039 Query 2080 TCGTCCTTTGCCTCATGAAGATGGAGGAAGTCATCCAGAGAGGCACCTTCAAGTACCTCC 2139 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2040 TCATCCTTTGCCTCATGAAGATGGAGGAAGTCATCCAGAGAGGCACCTTCAAGTACCTCC 2099 Query 2140 CTCATCAAAACAGGATAGTGGTTCAGGAGAATATGTTTCCCCCTTAATGAGTACGGATAA 2199 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2100 CTCATCAAAACAGGATAGTGGATCAGGAGAATATGTTTCCCCCTTAATGAGTACGGATAA 2159 Query 2200 CCACTGTAATTCTGTACCTCCTGGAGCTACCTTTCAGCAAAACTGGCCTGCAGCTGGTAG 2259 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2160 CCACTGTAATTCTGTACCTCCTGGAGCTACCTTTCAGCAAAACTGGCCTGCATCTGGTAG 2219 Query 2260 CACTCTTGTGAATTCTGCACAAGGAG 2285 |||||||||||||||||||||| ||| Sbjct 2220 CACTCTTGTGAATTCTGCACAAAGAG 2245 Score = 913 bits (494), Expect = 0.0 Identities = 539/561 (96%), Gaps = 2/561 (0%) Strand=Plus/Plus Query 2457 CAACATCATCTCAGATGCAAGGACCTCCAGCGCAACAGGTTTCAGGTCCCTTCATGCCGC 2516 |||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 2366 CAACATCATCACAGATGCAAGGACCTCCAGCGCAGCAGGTTTCAGGTCCATTCATGCCGC 2425 Query 2517 CTCCTGTGCATCCAGTCTCTCAGCCACAAGGACCTCAAGTTCAGCAATTTGATCAATTGT 2576 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2426 CTCCTGTGCATCCAGTCTCTCAGACACAAGGACCTCAAGTTCAGCAATTTGATCAATTGT 2485 Query 2577 ACCCACCTCCGCCTTTAGGACATTCATTACCTTCTGTACTCCAGCCACCACTACAACCTC 2636 ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 2486 ACCCACCTCCGCCTTTAGGACATTCATTACCCTCTGTAATCCAGCCACCACTACAACCTC 2545 Query 2637 AATCCCAGCCACCGGAACCACCGCCTGAAATGATGCCGCCTCCGCCTCAAGCTCTACCAC 2696 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2546 AATCCCAGCCACCGGAACCACCGCCTGAAATGATGCCGCCTCCGCCTCAAGCTCCACCAC 2605 Query 2697 CTCCTTTGCCTCACTCACACCCACCTCTGGTTCCTCCTCCTCCTTTTTCTCCACT-GTTG 2755 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | | Sbjct 2606 CTCCTTTGCCTCATTCACACCCACCTCTGGTTCCTCCTCCTCCTTTTTCTCCA-TCATCG 2664 Query 2756 TCCCCACGCTTACCTCCAATGGTCACCCAGTTGTGTGGATCAGAGGCTTCCAAACAGAAC 2815 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2665 TCCCCACGCTTACCTCCAATGGTCACCCAGTTGTGTGGACCAGAGGCTTCCAAACAGAAC 2724 Query 2816 ATAGGGCACCAATGGCAGGGTGCTTTGTCCAAAAGTGGAGTTCATTACTCCACCATCATT 2875 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2725 ATAGGGCACCAATGGCAGGGTGCTTTGTCCAAAAGTGGAGTTCATTACTCCACCATCATT 2784 Query 2876 GCACAGAGATTGGAATCAGACATTTGCAAATATATCATTGGATCTCCCGAGCCTGTGCAA 2935 | |||||| |||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 2785 GTACAGAGTTTGGAATCAGACATTTGCAAATATATCATTGGATCTTCAGAGCCTGTGCAA 2844 Query 2936 TGGCCAGTTAAACTGGATATGACTAAGCGCACGGATATGAAGAACGTAAAAGCTACTTTT 2995 |||||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||| Sbjct 2845 TGGCCAGTTAAATTGGATATGACCAAGCGCACGGATATGAAGCACGTGAAAGCTACTTTT 2904 Query 2996 GCGAATACACAACCACACAAA 3016 ||||||||||||||||| ||| Sbjct 2905 GCGAATACACAACCACAGAAA 2925 Score = 263 bits (142), Expect = 7e-69 Identities = 156/163 (96%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 3065 CTCCAAGATTTCATAACATACTTGAAGCAGAGAGATTGTGCAGGAGTAATAAAGATCCCT 3124 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 2926 CTCCAAGATTTCATAACATACTTGAAGCAGAGAGACTGCGCAGGAGTAATAAAGATCCCT 2985 Query 3125 GCATCAAGTCCCATGTGGGCAAGGCATCTCTTCATTCTTCCACACTCGCAAGAGACATGT 3184 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 2986 GCATCAAGTCCCATGTGGGCAAGGCATCTCTTCATTCTTCCGCATTCGCAAGAGACATGT 3045 Query 3185 TCCTTGCTTTCTGTTTCCCCATCTTCCTCGGAATGCTTGATCG 3227 ||||||||||| |||||||| |||||||| ||||||||||||| Sbjct 3046 TCCTTGCTTTCGGTTTCCCCGTCTTCCTCTGAATGCTTGATCG 3088 Score = 156 bits (84), Expect = 1e-36 Identities = 88/90 (98%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 2284 AGTCTCAGGAACTCCTCCATGTGTGCCCATACCAGCTCCGGGCCAGCCTGCAGTGCCTGC 2343 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 2276 AGTCTCAGGAACTCCTCCATGTGTGCCCATACCAGCTCCAGGACAGCCTGCAGTGCCTGC 2335 Query 2344 TACACCGACATCTCAAATCCCTCCATCTCC 2373 |||||||||||||||||||||||||||||| Sbjct 2336 TACACCGACATCTCAAATCCCTCCATCTCC 2365 > Ahg932978 jgi|Araly1|932978|scaffold_400966.1 Length=593 Score = 451 bits (244), Expect = 1e-125 Identities = 368/424 (87%), Gaps = 23/424 (5%) Strand=Plus/Plus Query 210 GAAGTAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTTAAATCTT 269 |||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1 GAAGCAGGAACAGAGATGAGATGCGAAGAGTGCATGACTGCTATAAGCGTCTCAAATCTT 60 Query 270 GTGTTGCTCAGAGAGATGGTGGCGGCCGCTCTGCGAATCTTGAGCAAGCGTATCGCTCCC 329 | ||| ||||||||||||||| || |||||||||||||||||||||||||||| |||| Sbjct 61 CTATTGGTCAGAGAGATGGTGGTGGATGCTCTGCGAATCTTGAGCAAGCGTATCGTTCCC 120 Query 330 TCATCTCCGCTTCC--AG--AG--G--------T------TGTACTAGCGTTAAGC-GCC 368 |||| ||||||||| || || | | |||||||||||||||| ||| Sbjct 121 TCATATCCGCTTCCAGAGTTAGTTGCTTATACTTGCAGGCTGTACTAGCGTTAAGCGGCC 180 Query 369 TTGTGGCTGATCTCGTTCCTCGATATGCATTGTACTGTCCTACGGCTATTGGAGATGCAG 428 |||||||||||||| ||| ||| |||||| | ||||| ||||| ||| | ||||||||| Sbjct 181 TTGTGGCTGATCTCATTCTTCGGTATGCACTATACTGCCCTACTGCTGTCGGAGATGCAT 240 Query 429 TGCAAGCTGTTATTGACATGCATAACTTCAGCTTGGAAGCTTTAAAGAGAGGACAAGATG 488 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 241 TGCAAGCTGTTATCGACATGCATAACTTCAGCGTGGAAGCTTTAAAGAGAGGACAAGATA 300 Query 489 CTGATGGTGTTGCTTTTCAAACTGCTAAAGCCTGCATATTTGGTCTAGTTGACCTATGTT 548 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 301 CTGATGGTGTTGCTTTTCAAACTGCTAAAGCCTGCATATTTGGTCTGGTTGACCTATGTT 360 Query 549 CTGCTGCTTTAT-CGAAGAAAACGTCATCACCAGGGGCTCGAGATATCTGCTCTGCCGTG 607 ||||||||| || | |||| ||| ||||||||||||| ||| |||||| ||||||| ||| Sbjct 361 CTGCTGCTT-ATTCAAAGACAACATCATCACCAGGGGGTCGTGATATCCGCTCTGCTGTG 419 Query 608 TTCA 611 |||| Sbjct 420 TTCA 423 > Ahg932460 jgi|Araly1|932460|scaffold_400448.1 Length=461 Score = 364 bits (197), Expect = 2e-99 Identities = 239/259 (92%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 92 CCTGAATCTCACCCTCCGCCACCACCGCAACTAGAATCCCAATCCCCTTCTACGGTGGTA 151 ||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||||| Sbjct 129 CCTGAATCTCAGCCTCCG---CCACCGCAATTAGAATCCCAATCCCCTTCTATGGTGGTT 185 Query 152 AGCTCGTTCCCGGCTCCGGTGACACCGTCGCCTCCATCTCAGGAGGAAATTCAAACGAGA 211 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 186 AGCTCGTTCCCAGCTCCGGTGACGCCGTCGCCTCCATCTCAGGAGGAAATTCAAACCAGA 245 Query 212 AGTAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTTAAATCTTGT 271 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 246 AGCAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTCAAATCTTCT 305 Query 272 GTTGCTCAGAGAGATGGTGGCGGCCGCTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTC 331 ||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||| Sbjct 306 ATTGGTCAGAGAGATGGTGGTGGGTGCTCTGCGAATCTTGAGCAAGCGTATCGTTCCCTC 365 Query 332 ATCTCCGCTTCCAGAGGTT 350 || |||||||||||||||| Sbjct 366 ATATCCGCTTCCAGAGGTT 384 Score = 99.0 bits (53), Expect = 2e-19 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 298 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 350 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 50 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 102 > Ahg343965 jgi|Araly1|343965|fgenesh1_pg.C_scaffold_4000307 Length=627 Score = 324 bits (175), Expect = 3e-87 Identities = 209/225 (93%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 92 CCTGAATCTCACCCTCCGCCACCACCGCAACTAGAATCCCAATCCCCTTCTACGGTGGTA 151 ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 109 CCTGAATCTCAGCCTCCG---CCACCGCAATTAGAATCCCAATCCCCTTCTACGGTGGTT 165 Query 152 AGCTCGTTCCCGGCTCCGGTGACACCGTCGCCTCCATCTCAGGAGGAAATTCAAACGAGA 211 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 166 AGCTCGTTCCCAGCTCCGGTGACACCGTCGCCTCCATCTCAGGAGGAAATTCAAACCAGA 225 Query 212 AGTAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTTAAATCTTGT 271 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 226 AGCAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTCAAATCTTCT 285 Query 272 GTTGCTCAGAGAGATGGTGGCGGCCGCTCTGCGAATCTTGAGCAA 316 ||| ||||||||||||||| || |||||||||||||||||||| Sbjct 286 ATTGGTCAGAGAGATGGTGGTGGGTGCTCTGCGAATCTTGAGCAA 330 Score = 99.0 bits (53), Expect = 2e-19 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 298 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 350 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 82 > Ahg931233 jgi|Araly1|931233|scaffold_303690.1 Length=1135 Score = 318 bits (172), Expect = 1e-85 Identities = 208/225 (92%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 92 CCTGAATCTCACCCTCCGCCACCACCGCAACTAGAATCCCAATCCCCTTCTACGGTGGTA 151 ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 129 CCTGAATCTCAGCCTCCG---CCACCGCAATTAGAATCCCAATCCCCTTCTACGGTGGTT 185 Query 152 AGCTCGTTCCCGGCTCCGGTGACACCGTCGCCTCCATCTCAGGAGGAAATTCAAACGAGA 211 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 186 AGCTCGTTCCCAGCTCCGGTGACGCCGTCGCCTCCATCTCAGGAGGAAATTCAAACCAGA 245 Query 212 AGTAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTTAAATCTTGT 271 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 246 AGCAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTCAAATCTTCT 305 Query 272 GTTGCTCAGAGAGATGGTGGCGGCCGCTCTGCGAATCTTGAGCAA 316 ||| ||||||||||||||| || |||||||||||||||||||| Sbjct 306 ATTGGTCAGAGAGATGGTGGTGGGTGCTCTGCGAATCTTGAGCAA 350 Score = 99.0 bits (53), Expect = 2e-19 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 298 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 350 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 50 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 102 > Ahg347303 jgi|Araly1|347303|fgenesh1_pg.C_scaffold_5000695 Length=627 Score = 318 bits (172), Expect = 1e-85 Identities = 208/225 (92%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 92 CCTGAATCTCACCCTCCGCCACCACCGCAACTAGAATCCCAATCCCCTTCTACGGTGGTA 151 ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 109 CCTGAATCTCAGCCTCCG---CCACCGCAATTAGAATCCCAATCCCCTTCTACGGTGGTT 165 Query 152 AGCTCGTTCCCGGCTCCGGTGACACCGTCGCCTCCATCTCAGGAGGAAATTCAAACGAGA 211 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 166 AGCTCGTTCCCAGCTCCGGTGACGCCGTCGCCTCCATCTCAGGAGGAAATTCAAACCAGA 225 Query 212 AGTAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTTAAATCTTGT 271 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 226 AGCAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTCAAATCTTCT 285 Query 272 GTTGCTCAGAGAGATGGTGGCGGCCGCTCTGCGAATCTTGAGCAA 316 ||| ||||||||||||||| || |||||||||||||||||||| Sbjct 286 ATTGGTCAGAGAGATGGTGGTGGGTGCTCTGCGAATCTTGAGCAA 330 Score = 99.0 bits (53), Expect = 2e-19 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 298 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 350 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 82 > Ahg338589 jgi|Araly1|338589|fgenesh1_pg.C_scaffold_2000688 Length=648 Score = 307 bits (166), Expect = 3e-82 Identities = 206/225 (92%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 92 CCTGAATCTCACCCTCCGCCACCACCGCAACTAGAATCCCAATCCCCTTCTACGGTGGTA 151 ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 109 CCTGAATCTCAGCCTCCG---CCACCGCAATTAGAATCCCAATCCCCTTCTACGGTGGTT 165 Query 152 AGCTCGTTCCCGGCTCCGGTGACACCGTCGCCTCCATCTCAGGAGGAAATTCAAACGAGA 211 |||||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||| Sbjct 166 AGCTCGTTCCTAGCTCCGGTGACGCCATCGCCTCCATCTCAGGAGGAAATTCAAACCAGA 225 Query 212 AGTAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTTAAATCTTGT 271 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 226 AGAAGGAACAGAGAAGAGATTCGAAGAGTGCATGACTGCTATAAGCGTCTCAAATCTTCT 285 Query 272 GTTGCTCAGAGAGATGGTGGCGGCCGCTCTGCGAATCTTGAGCAA 316 ||| ||||||||||||||| || |||||||||||||||||||| Sbjct 286 ATTGGTCAGAGAGATGGTGGTGGGTGCTCTGCGAATCTTGAGCAA 330 Score = 99.0 bits (53), Expect = 2e-19 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 298 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 350 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 82 > Ahg932977 jgi|Araly1|932977|scaffold_400965.1 Length=237 Score = 148 bits (80), Expect = 2e-34 Identities = 100/109 (92%), Gaps = 3/109 (3%) Strand=Plus/Plus Query 95 GAATCTCACCCTCCGCCACCACCGCAACTAGAATCCCAATCCCCTTCTACGGTGGTAAGC 154 |||||||| |||||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct 132 GAATCTCAGCCTCCG---CCACCGCAATTAGAATCCCAATCCCCTTCTACGGTGGTTAGC 188 Query 155 TCGTTCCCGGCTCCGGTGACACCGTCGCCTCCATCTCAGGAGGAAATTC 203 |||||||| ||||||||||| |||| ||||||||||||||||||||||| Sbjct 189 TCGTTCCCAGCTCCGGTGACGCCGTAGCCTCCATCTCAGGAGGAAATTC 237 Score = 93.5 bits (50), Expect = 1e-17 Identities = 52/53 (98%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 298 CTCTGCGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 350 |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 50 CTCTACGAATCTTGAGCAAGCGTATCGCTCCCTCATCTCCGCTTCCAGAGGTT 102 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 131260569277 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5