BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G27940.1
Length=3738
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472995 jgi|Araly1|472995|fgenesh2_kg.1__2949__AT1G27940.1 5674 0.0
Ahg473002 jgi|Araly1|473002|fgenesh2_kg.1__2956__AT1G28010.1 4922 0.0
> Ahg472995 jgi|Araly1|472995|fgenesh2_kg.1__2949__AT1G27940.1
Length=3741
Score = 5674 bits (3072), Expect = 0.0
Identities = 3523/3743 (94%), Gaps = 21/3743 (1%)
Strand=Plus/Plus
Query 1 ATGGATAACACAG-A-AA-GATCCTCTAATGGAAACATCCAAGCCGAGACGGAAGCAAAG 57
||||||||||||| | || ||||||||||||||||||| |||||||||||||||||| |
Sbjct 1 ATGGATAACACAGAAGAACGATCCTCTAATGGAAACATACAAGCCGAGACGGAAGCAGTG 60
Query 58 GAGGAGAAGAAAAATATAAAGAAGGAATCAGTGTCATTGATGGGTTTGTTTAGCGCAGCA 117
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GAGGAGAAGAAAAAGATAAAGAAGGAATCAGTGTCATTGATGGGTTTGTTTAGCGCAGCA 120
Query 118 GATAAACTTGATTACTTTCTCATGTTGCTAGGAGGTTTAGGTGCGTGTATACATGGCGCT 177
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 121 GATAAACTTGATTACTTTCTGATGTTGCTAGGAGGTTTAGGTGCGTGTATACATGGCGCT 180
Query 178 ACGCTTCCTCTCTTCTTCGTGTTCTTCGGAAAAATGCTAGATTCTCTTGGAAATCTTTCT 237
|||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 181 ACGCTTCCGCTCTTCTTCGTGTTCTTTGGGAAAATGCTAGATTCTCTTGGAAATCTTTCT 240
Query 238 ACAGATCCTAAAGCCATATCTTCCCGCGTTTCACAGAATGCTCTGTACTTGGTCTACTTA 297
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 241 ACAGATCCTAAAGCCATATCTTCCCGCGTTTCACAGAATGCTCTGTATTTGGTCTACTTA 300
Query 298 GGATTGGTCAATTTTGTATCAGCTTGGATCGGAGTTTCTTGTTGGATGCAAACAGGGGAA 357
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GGATTGGTCAATTTGGTATCAGCTTGGATCGGAGTTTCTTGTTGGATGCAAACAGGGGAA 360
Query 358 AGACAAACAGCACGATTGCGTATAAATTATCTCAAATCGATATTAGCAAAAGACATTACT 417
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 361 AGACAAACAGCGCGATTGCGTATAAATTATCTCAAATCGATCTTAGCAAAAGACATTACT 420
Query 418 TTCTTTGATACTGAAGCTAGAGATTCAAATCTCATTTTTCACATATCAAGCGATGCTATC 477
|||||||| || |||||||||||||||||||||||||||||||| ||||| || || |||
Sbjct 421 TTCTTTGACACAGAAGCTAGAGATTCAAATCTCATTTTTCACATCTCAAGTGACGCGATC 480
Query 478 TTGGTTCAAGATGCAATTGGCGATAAGACCGACCATGTTTTGCGGTATCTATCTCAGTTT 537
||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 481 TTGGTTCAAGATGCAATTGGCGATAAGACAGACCATGTTTTGCGGTATTTATCTCAGTTC 540
Query 538 ATAGCGGGATTTGTCATTGGTTTTTTGTCGGTATGGCAACTAACGCTGCTCACGTTAGGA 597
|| |||||||||||||| ||||||||||| |||||||||||||||||||| || |||| |
Sbjct 541 ATCGCGGGATTTGTCATCGGTTTTTTGTCAGTATGGCAACTAACGCTGCTTACCTTAGCA 600
Query 598 GTGGTTCCACTGATAGCTA-TTGCAGGAGGAGGGTATGCTATAGTCATGTCTACAATCTC 656
||||||||| | ||||| | ||||||||||||| ||||||||| ||||||| ||||||||
Sbjct 601 GTGGTTCCATTAATAGC-AGTTGCAGGAGGAGGATATGCTATAATCATGTCCACAATCTC 659
Query 657 AGAGAAGAGTGAGACTGCTTATGCTGATGCAGGAAAAGTCGCAGAAGAGGTTATGTCACA 716
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 AGAGAAGAGTGAAACTGCTTATGCTGATGCAGGAAAAGTCGCAGAAGAGGTTATGTCACA 719
Query 717 GGTGAGAACAGTGTATGCTTTTGTAGGAGAAGAGAAAGCTGTAAAATCTTACTCAAATTC 776
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 720 GGTGAGAACAGTGTATGCATTTGTAGGAGAAGAGAAAGCTGTAAAATCTTACTCAAATTC 779
Query 777 TCTCAAGAAAGCTCTGAAACTCGGTAAAAGGAGCGGTCTTGCTAAAGGTTTAGGAGTTGG 836
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 TCTCAAGAAAGCTTTGAAACTCGGTAAAAGGAGCGGTCTTGCTAAAGGTTTAGGAGTTGG 839
Query 837 ATTAACATATAGCCTCTTGTTCTGTGCTTGGGCTTTGCTTTTGTGGTATGCAAGTCTTCT 896
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 840 ATTAACATATAGCCTCTTGTTCTGTTCTTGGGCATTGCTTTTGTGGTATGCAAGTCTTCT 899
Query 897 TGTACGCCACGGCAAAACCAATGGTGCAAAAGCCTTCACAACCATCCTCAATGTCATTTT 956
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 900 TGTACGTCACGGCAAAACCAATGGTGCAAAAGCCTTCACAACGATCCTCAATGTCATTTT 959
Query 957 CAGTGGATTCGCCTTAGGTCAAGCCGCACCTAGCTTATCCGCGATTGCTAAGGGTAGAGT 1016
||||||||||||||||||||||||||| |||||||||||||||||||| || || |||||
Sbjct 960 CAGTGGATTCGCCTTAGGTCAAGCCGCGCCTAGCTTATCCGCGATTGCCAAAGGCAGAGT 1019
Query 1017 TGCTGCTGCAAACATATTCAGAATGATAGGGAACAACAATTC-TGAAAGTTCTCAAAGAT 1075
|||||||||||| ||||||||||||||||| |||||| | || |||||||||| |||||
Sbjct 1020 TGCTGCTGCAAATATATTCAGAATGATAGGAAACAAC-AGTCTTGAAAGTTCTGAAAGAC 1078
Query 1076 TAGACGAGGGAACAACATTGCAAAATGTAGCTGGGAGGATTGAGTTTCAAAAAGTGTCTT 1135
|||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1079 TAGAAAATGGAACAACATTGCAAAATGTAGCTGGGAGGATTGAGTTTCATCAAGTGTCTT 1138
Query 1136 TCGCATATCCTTCTAGACCAAACATGGTTTTTGAGAATCTTAGTTTCACAATACGGTCAG 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1139 TCGCATATCCTTCTAGACCAAACATGGTTTTTGAGAATCTTAGTTTCACAATACGTTCGG 1198
Query 1196 GCAAGACTTTTGCATTTGTCGGTCCAAGTGGTTCAGGGAAAAGCACAATCATATCAATGG 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 GCAAGACTTTTGCATTTGTCGGTCCAAGTGGTTCAGGGAAAAGCACAATCATATCAATGG 1258
Query 1256 TTCAACGTTTCTATGAACCTAACTCAGGGGAGATTCTCTTAGATGGAAATGACATCAAGA 1315
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1259 TGCAACGTTTCTATGAACCTAACTCAGGGGAGATTCTCTTGGATGGAAATGACATCAAGA 1318
Query 1316 GCCTAAAGCTTAAATGGTTTAGAGAACAGCTTGGATTAGTGAGTCAAGAACCAGCATTAT 1375
|||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1319 GCCTAAAGCTAAAATGGTTGAGAGAACACCTTGGATTAGTGAGTCAAGAACCAGCATTAT 1378
Query 1376 TCGCCACAACAATAGCTTCCAATATTCTTTTAGGTAAAGAGAATGCGAATATGGATCAGA 1435
||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 1379 TCGCCACGACTATAGCTTCCAATATTATTTTTGGTAAAGAGAATGCGAATATGGATCAGA 1438
Query 1436 TCATAGAAGCTGCTAAAGCAGCTAATGCTGATTCTTTCATTAAATCATTACCTAATGGTT 1495
||||| |||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 1439 TCATAAAAGCCGCTAAAGCAGCAAATGCAGATTCTTTCATTAAATCATTACCCAATGGTT 1498
Query 1496 ACAATACTCAGGTTGGAGAAGGAGGAACTCAACTCTCAGGAGGACAGAAACAGAGGATTG 1555
||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 1499 ACAATACTCAGGTTGGAGAAGGAGGAACTCAGCTCTCTGGAGGTCAGAAACAGAGGATTG 1558
Query 1556 CAATTGCTCGAGCAGTTCTAAGAAATCCAAAGATATTACTTTTAGATGAAGCAACAAGCG 1615
| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1559 CCATTGCTAGAGCAGTTCTAAGAAATCCAAAGATATTACTTTTAGATGAAGCAACGAGCG 1618
Query 1616 CTCTTGATGCCGAATCAGAGAAGATTGTTCAGCAAGCACTTGACAATGTCATGGAAAAAA 1675
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |
Sbjct 1619 CTCTTGATGCCGAATCAGAGAAGATTGTTCAGCAAGCACTTGACAATATCACGGAAAATA 1678
Query 1676 GAACAACAATCGTCGTTGCACATAGATTATCCACCATTCGAAATGTTGACAAGATTGTTG 1735
|||||||||| || ||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1679 GAACAACAATTGTTGTTGCCCATAGATTATCTACCATTCGAAATGTTGACAAGATTGTTG 1738
Query 1736 TCTTGAGAGATGGTCAAGTTAGGGAAACCGGAAGCCACTCAGAACTCATGTTAAGAGGAG 1795
| |||||| | ||||| |||| |||||| ||||||||||||||| | |||| ||||||||
Sbjct 1739 TATTGAGAAAGGGTCAGGTTACGGAAACTGGAAGCCACTCAGAATTGATGTCAAGAGGAG 1798
Query 1796 GAGATTATGCGACTCTTGTCAATTGCCAAGAGACAGAACCTCAAGAAAACTCGAGATCAA 1855
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 GAGATTACGCGACTCTTGTCAATTGCCAAGAGACAGAACCTCAAGAAAACTCGAGATCAA 1858
Query 1856 TTATGTCTGAAACTTGTAAATCTCAAGCTGGATCTTCTAGTTCAAGAAGAGTTTCTAGCT 1915
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1859 TTATGTCTGAAACTTGTAAATCTCAAGTTGGATCTTCTAGTTCAAGAAGAATTTCTAGCT 1918
Query 1916 CAAGGAGGACTTCAAGCTTCAGGGTAGACCAAGAGAAGACTAAAAATGATGATTCCAA-- 1973
|||||||||||||||||||||||| |||||||||||||||| |||||||| | | ||
Sbjct 1919 CAAGGAGGACTTCAAGCTTCAGGGAAGACCAAGAGAAGACTGAAAATGAT--T-CAAATG 1975
Query 1974 A-AAAGACTTTAGCTCTTCTTCGATGATATGGGAACTTATAAAGTTGAATTCTCCAGAAT 2032
| ||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1976 ACAAAGATTTTAGCTCATCTTCAATGATATGGGAACTTATAAAGCTGAATTCTCCAGAAT 2035
Query 2033 GGCCATATGCATTACTTGGCTCCATTGGTGCAGTACTTGCTGGAGCACAAACTCCATTGT 2092
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 2036 GGCCATATGCATTACTTGGCTCAATTGGTGCAGTTCTTGCTGGAGCACAAACTCCATTGT 2095
Query 2093 TCTCTATGGGGATTGCTTATGTGTTAACTGCATTTTATTCGCCTTTTCCTAATGTGATCA 2152
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 2096 TCTCTATGGGGATTGCTTATGTGTTAACTGCATTTTATTCGCCTTTTGCTAATGCGATCA 2155
Query 2153 AGCGCGACGTAGAAAAGGTAGCTATTATCTTTGCTGGAGCTGGAATAGTAACTGCACCTA 2212
||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||
Sbjct 2156 AGCGCGACGTAGAAAAGGTAGCTATTATCTTTGTTGGAGTTGGAATAGTAACAGCACCTA 2215
Query 2213 TATATCTTCTCCAACATTACTTCTATACACTAATGGGAGAGCGTCTTACTTCTAGGGTTC 2272
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 2216 TATATCTTCTCCAACATTACTTCTATACACTTATGGGAGAGCGTCTTACTTCTCGGGTTC 2275
Query 2273 GCTTATCCTTGTTCTCAGCGATTCTTTCAAATGAGATTGGATGGTTTGATCTGGATGAGA 2332
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2276 GCTTATCCTTGTTCTCAGCGATTCTTTCGAATGAGATTGGATGGTTTGATCTGGATGAGA 2335
Query 2333 ACAACACTGGCTCACTTACTTCAATCTTAGCTGCTGATGCAACTTTGGTGAGGAGTGCTC 2392
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2336 ACAACACTGGCTCACTTACTTCAATCTTGGCTGCTGATGCAACTTTGGTGAGGAGTGCTC 2395
Query 2393 TAGCGGATCGCCTCTCGACAATAGTCCAAAACTTGTCTCTTACAGTCACTGCATTGGCAC 2452
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct 2396 TAGCGGATCGCCTCTCGACAATAGTGCAAAACTTGTCTCTTACAGTCACAGCATTAGCAC 2455
Query 2453 TTGCCTTTT-TCTATAGTTGGCGTGTTGCAGCTGTGGTAACGGCTTGTTTCCCTCTTCTC 2511
||||||||| | || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 2456 TTGCCTTTTAT-TACAGTTGGCGTGTTGCAGCTGTCGTAACGGCTTGTTTTCCTCTTCTC 2514
Query 2512 ATTGCGGCTTCACTTACCGAGCAACTATTTTTAAAAGGCTTTGGAGGAGATTACACAAGA 2571
||||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||
Sbjct 2515 ATTGCCGCTTCACTTACTGAGCAACTATTTCTAAAAGGCTTTGGAGGAGACTACACAAGG 2574
Query 2572 GCTTACTCTAGGGCAACTTCAGTGGCACGTGAAGCGATTGCAAATATAAGAACTGTCGCT 2631
||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 2575 GCTTACTCTAGAGCAACTTCAGTGGCGCGTGAAGCAATTGCAAATATAAGAACTGTCGCT 2634
Query 2632 GCATATGGTGCCGAAAAGCAGATCTCGGAACAGTTTACTTGTGAGCTAAGCAAGCCCACC 2691
|| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2635 GCGTTTGGTGCCGAAAAGCAGATCGCGGAACAGTTTACTTGTGAGCTAAGCAAGCCCACC 2694
Query 2692 AAGAATGCCTTTGTCAGAGGTCATATCTCTGGATTTGGATACGGTTTGTCTCAGTTTCTT 2751
|||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2695 AAGAATGCCTTTGTTAGAGGTCATATCTCTGGATTTGGATACGGATTATCTCAGTTTCTT 2754
Query 2752 GCGTTCTGTTCCTACGCTCTTGGTCTCTGGTACGTATCGGTTTTGATCAATCATAAGGAG 2811
|||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 2755 GCGTTCTGCTCCTACGCTCTTGGTCTCTGGTACGTATCGGTTTCGATCAAGCATAAGGAG 2814
Query 2812 ACGAATTTTGGGGATAGTATCAAATCCTTCATGGTGTTGATCGTCACAGCTTTCTCAGTT 2871
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 2815 ACGAATTTTGGGGATAGTATCAAATCTTTTATGGTGTTGATCGTCACAGCTTTCTCAGTT 2874
Query 2872 TCGGAAACGCTTGCTTTGACCCCAGATATCGTGAAGGGCACGCAAGCACTCGGGTCAGTT 2931
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2875 TCGGAAACGCTTGCTTTGACACCAGATATCGTGAAGGGCACGCAAGCACTCGGGTCAGTT 2934
Query 2932 TTCAGGGTTTTACATAGAGAGACCAAGATATCTCCAGACCAGCCTAACTCAAGAATGGTT 2991
||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||
Sbjct 2935 TTCAGGGTTTTACATAGAGAGACTGAGATACCTCCAGACCAGCCTAACTCGAGAATGGTT 2994
Query 2992 AGTCA-AGTCAAAGGAGATATAGAGTTTAGAAACGTGAGTTTTGTGTATCCCACAAGACC 3050
||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2995 AGTCAGA-TCAAAGGAGATATAGAGTTTAGAAACGTGAGTTTTGTGTATCCCACGAGACC 3053
Query 3051 CGAAATTGACATTTTCAAAAACCTAAACCTCCGAGTTTCAGCCGGGAAAAGTCTTGCGGT 3110
||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3054 CGATATTAACATTTTCCAAAACCTAAACCTCCGAGTTTCAGCCGGGAAAAGTCTTGCAGT 3113
Query 3111 CGTAGGACCTAGTGGTTCGGGAAAGAGCACGGTGATCGGACTGATCATGAGATTCTACGA 3170
||| || ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct 3114 CGTGGGGCCTAGTGGTTCTGGAAAAAGCACAGTGATCGGACTGATCATGAGATTCTACGA 3173
Query 3171 TCCGAGCAACGGCAATCTTTGCATCGATGGGCAAGACATAAAAACCCTAAACTTACGTAG 3230
|| ||| |||| ||||| |||||||||||||| |||||||||||||||||| |||||||
Sbjct 3174 CCCTAGCCACGGAAATCTCTGCATCGATGGGCAGGACATAAAAACCCTAAACCTACGTAG 3233
Query 3231 CTTGCGCAAGAAGCTAGCGCTAGTTCAACAAGAACCGGCTCTCTTTTCAACAACCATATA 3290
||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||| ||| |
Sbjct 3234 CTTGCGCAAGAAGCTAGCGTTAGTTCAGCAAGAACCAGCTCTGTTTTCAACAACAATACA 3293
Query 3291 CGAAAACATTAAGTATGGCAATGAAAACGCATCGGAGGCAGAGATCATGGAAGCTGCGAA 3350
||| ||||| ||||| || || || |||||||| ||| |||||||||| ||||| || ||
Sbjct 3294 CGAGAACATCAAGTACGGGAACGAGAACGCATCAGAGTCAGAGATCATCGAAGCCGC-AA 3352
Query 3351 AG-CGGCGAATGCGCACGAGTTCATTATCAAGATGGAAGAAGGGTACAAAACGCACGCGG 3409
|| | ||||| |||||||||||||| | || |||||||||||||||||| ||| ||| |
Sbjct 3353 AGGCCGCGAACGCGCACGAGTTCATAAGCAGGATGGAAGAAGGGTACAAGACGTACGTAG 3412
Query 3410 GTGATAAGGGAGTACAATTATCAGGTGGGCAGAAACAGAGAGTGGCTATCGCGA-GGGCG 3468
||||||||||||| || ||||||||||| |||||||||||||||||||| || | |||||
Sbjct 3413 GTGATAAGGGAGTGCAGTTATCAGGTGGTCAGAAACAGAGAGTGGCTATTGC-ACGGGCG 3471
Query 3469 GTTTTAAAGGACCCTTCAGTGCTTCTCCTTGATGAGGCAACAAGTGCTCTGGACACGAGC 3528
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3472 GTTTTAAAGGATCCTTCAGTGCTTCTCCTTGATGAGGCAACAAGTGCTTTGGACACGAGC 3531
Query 3529 TCGGAGAAACTAGTCCAAGAGGCGCTAGACAAGCTAATGAAGGGACGAACGACGGTATTG 3588
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 3532 TCGGAGAAACTAGTCCAAGAGGCGCTAGACAAGCTGATGAAGGGACGAACCACGGTATTG 3591
Query 3589 GTGGCTCATAGGCTGTCGACCATAAGAAAAGCAGATACGGTCGCTGTGTTGCATAAGGGA 3648
|| ||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 3592 GTAGCTCATAGGCTCTCGACCATAAGAAAAGCAGACACGATCGCTGTGTTGCATAAGGGA 3651
Query 3649 AGGGTTGTAGAGAAAGGAAGTCATAGAGAGCTTGTTTCAATACCTAATGGGTTTTATAAG 3708
|| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3652 AGAGTTGTGGAGAAGGGAAGTCATAGAGAGCTTGTTTCAATACCTAATGGGTTTTATAAG 3711
Query 3709 CAATTGACGAGTCTTCAAGAAGT 3731
|||||||||||||||||||||||
Sbjct 3712 CAATTGACGAGTCTTCAAGAAGT 3734
> Ahg473002 jgi|Araly1|473002|fgenesh2_kg.1__2956__AT1G28010.1
Length=3878
Score = 4922 bits (2665), Expect = 0.0
Identities = 3408/3767 (90%), Gaps = 49/3767 (1%)
Strand=Plus/Plus
Query 1 ATGGATAACACAGAAAGATCCTCTAATGGAAACATCCA-AGCCGAGACGGAAG--CA-AA 56
|||||||||| |||| | ||||||||||||||||||| | | ||||| |||| | ||
Sbjct 1 ATGGATAACATAGAACCACCCTCTAATGGAAACATCCATA-CTGAGACAGAAGTAAAGAA 59
Query 57 GGAGGAGAAGAAAAATATAAAGAAGGAATCAGTGTCATTGATGGGTTTGTTTAGCGCAGC 116
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 60 GGAGGAGAAGAAAAATATGAAGAAGGAATCAGTGTCATTGATGGGTTTGTTTAGTGCAGC 119
Query 117 AGATAAACTTGATTACTTTCTCATGTTGCTAGGAGGTTTAGGTG-CGTGTATACATGGCG 175
|||||| |||||| ||||||||||| || || |||||||| | ||||||| |||||||
Sbjct 120 AGATAATGTTGATTGTTTTCTCATGTTTCTTGGCGGTTTAGG-GACGTGTATTCATGGCG 178
Query 176 CTACGCTTCCTCTCTTCTTCGTGTTCTTCGGAAAAATGCTAGATTCTCTTGGAAATCTTT 235
||||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||
Sbjct 179 GTACGCTTCCGCTCTTCTTCGTGTTCTTCGGGGGCATGTTAGATTCTCTTGGGAATCTTT 238
Query 236 CTACAGATCCTAAA-GCCATATCTTCCCGCGTTTCACAGAATGCTCTGTACTTGGTCTAC 294
|||| || || ||| |||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 239 CTACTGA-CCCAAACGCCATATCTTCCCGCGTTTCACAGAATGCTCTATACTTAGTCTAC 297
Query 295 TTAGGATTGGTCAATTTTGTATCAGCTTGGATCGGAGTTTCTTGTTGGATGCAAACAGGG 354
||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||
Sbjct 298 TTAGGATTGGTCAATTTGGTATCAGCATGGATCGGAGTTGCTTGTTGGATGCAAACAGGG 357
Query 355 GAAAGACAAACAGCACGATTGCGTATAAATTATCTCAAATCGATATTAGCAAAAGACATT 414
|||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||
Sbjct 358 GAAAGACAAACAGCGCGATTGCGTATAAATTATCTCAAATCAATTTTAGCAAAAGACATT 417
Query 415 ACTTTCTTTGATACTGAAGCTAGAGATTCAAATC-TCATTTTTCACATATCAAGCGATGC 473
|||||||||||||||||||||||||||||||| | ||||||| ||||| |||||||| ||
Sbjct 418 ACTTTCTTTGATACTGAAGCTAGAGATTCAAA-CTTCATTTTCCACATCTCAAGCGACGC 476
Query 474 TATCTTGGTTCAAGATGCAATTGGCGATAAGACCGACCATGTTTTGCGGTATC-TATCTC 532
|||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| ||
Sbjct 477 AATCTTGGTTCAAGATGCAATTGGCGATAAGACCGGCCATGTTTTGCGGTA-CTTATGTC 535
Query 533 AGTTTATAGCGGGATTTGTCATTGGTTTTTTGTCGGTATGGCAACTAACGCTGCTCACGT 592
|||| || |||||||||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct 536 AGTTCATCGCGGGATTTGTCATCGGTTTTTTGTCGGTATGGAAACTAACGTTGCTCACGT 595
Query 593 TAGGAGTGGTTCCACTGATAGCTATTGCAGGAGGAGGGTATGCTATAGTCATGTCTACAA 652
|||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 596 TAGGAGTGGTTCCATTGATAGCAATTGCAGGAGGAGGCTATGCTATAGTCATGTCTACAA 655
Query 653 TCTCAGAGAAGAGTG-AGACTGCTTATGCTGATGCAGGAAAAGTCGCAGAAGAGGTTATG 711
||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||
Sbjct 656 TCTCAGAGAAGAGTGAAG-CTGCTTATGCTGATGCAGGAAAAGTCGCAGAAGAGGTCATG 714
Query 712 TCACAGGTGAGAACAGTGTATGCTTTTGTAGGAGAAGAGAAAGCTGTAAAATCTTACTCA 771
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct 715 TCACAAGTGAGAACAGTATATGCATTTGTAGGAGAAGAGAAAGCTGTAAAATCTTATTCA 774
Query 772 AATTCTCTCAAGAAAGCTCTGAAACTCGGTAAAAGGAGCGGTCTTGCTAAAGGTTTAGGA 831
||||||||||||||||||||||||||| ||||||| || |||||||||||||| ||||||
Sbjct 775 AATTCTCTCAAGAAAGCTCTGAAACTCAGTAAAAGAAGTGGTCTTGCTAAAGGCTTAGGA 834
Query 832 GTTGGATTAACATATAGCCTCTTGTTCTGTGCTTGGGCTTTGCTTTTGTGGTATGCAAGT 891
||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 835 GTTGGCTTAACATATAGCCTCTTGTTCTGTGCTTGGGCATTGCTTTTTTGGTATGCAAGT 894
Query 892 CTTCTTGTACGCCACGGCAAAACCAATGGTGCAAAAGCCTTCACAACCATCCTCAATGTC 951
|||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||||
Sbjct 895 CTTCTTGTACGCCACGGCAAAACCAACGGCGCAAAAGCCTTCACAACGATCCTTAATGTC 954
Query 952 ATTT-TCAGTGGATTCGCCTTAGGTCAAGCCGCACCTAGCTTATCCGCGATTGCTAAGGG 1010
|||| | ||||||||||||||||||||||||| |||||||||||||| ||| | || ||
Sbjct 955 ATTTAT-AGTGGATTCGCCTTAGGTCAAGCCGTGCCTAGCTTATCCGCAATTTCCAAAGG 1013
Query 1011 TAGAGTTGCTGCTGCAAACATATTCAGAATGATAGGGAA-CAACAATTC-TGAAAG-TTC 1067
||||||||||||||||| || |||||||||||| |||| |||||| || |||||| ||
Sbjct 1014 AAGAGTTGCTGCTGCAAATATTTTCAGAATGATA-GGAAGCAACAA-TCTTGAAAGCTT- 1070
Query 1068 TCAAAGATTAGACGAGGGAACAACATTGCAAAATGTAGCTGGGAGGATTGAGTTTCAAAA 1127
| | ||| ||||| | ||||||||||||||||| |||| ||||||||||||||||
Sbjct 1071 TGAGAGACTAGACAATGGAACAACATTGCAAAACGTAGTTGGGAGGATTGAGTTTTGTGG 1130
Query 1128 AGTGTCTTTCGCATATCCTTCTAGACCAAACATGGTTTTTGAGAATCTTAGTTTCACAAT 1187
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1131 AGTGTCTTTCGCATATCCTTCGAGACCAAACATGGTTTTTGAGAATCTTAGTTTCACAAT 1190
Query 1188 ACGGTCAGGCAAGACTTTTGCATTTGTCGGTCCAAGTGGTTCAGGGAAAAGCACAATCAT 1247
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 ACATTCAGGCATGACTTTTGCATTTGTCGGTCCAAGTGGTTCAGGGAAAAGCACAATCAT 1250
Query 1248 ATCAATGGTTCAACGTTTCTATGAACCTAACTCAGGGGAGATTCTCTTAGATGGAAATGA 1307
||||||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||
Sbjct 1251 ATCAATGGTGCAACGTTTCTATGAACCTAACTCAGGGAAGATTCTCTTGGACGGAAATGA 1310
Query 1308 CATCAAGAGCCTAAAGCTTAAATGGTTTAGAGAACAGCTTGGATTAGTGAGTCAAGAACC 1367
|||||||| ||| |||||||||||||| ||||||||| | ||||||||||||||||||||
Sbjct 1311 CATCAAGAACCTGAAGCTTAAATGGTTGAGAGAACAGATGGGATTAGTGAGTCAAGAACC 1370
Query 1368 AGCATTATTCGCCACAACAATAGCTTCCAATATTCTTTTAGGTAAAGAGAATGCGAATAT 1427
||| ||||| ||||| || |||||||||||||||||| | ||||||||||| |||| |||
Sbjct 1371 AGCTTTATTTGCCACGACTATAGCTTCCAATATTCTTCTCGGTAAAGAGAAGGCGAGTAT 1430
Query 1428 GGATCAGATCATAGAAGCTGCTAAAGCAGCTAATGCTGATTCTTTCATTAAATCATTACC 1487
|||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||
Sbjct 1431 GGATCAGATCATAGAAGCTGCTAAAGCAGCCAACGCAGATTCTTTCATTAAATCATTGCC 1490
Query 1488 TAATGGTTACAATACTCAGGTTGGAGAAGGAGGAACTCAACTCTCAGGAGGACAGAAACA 1547
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1491 AAATGGTTACAATACTCAGGTTGGAGAAGGAGGAACTCAGCTCTCGGGAGGACAGAAACA 1550
Query 1548 GAGGATTGCAATTGCTCGAGCAGTTCTAAGAAATCCAAAGATATTACTTTTAGATGAAGC 1607
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1551 GAGGATTGCAATTGCTCGAGCGGTTCTAAGAAATCCAAAGATATTACTTTTAGATGAAGC 1610
Query 1608 AACAAGCGCTCTTGATGCCGAATCAGAGAAGATTGTTCAGCAAGCACTTGACAATGTCAT 1667
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1611 AACGAGCGCTCTTGATGCCGAATCAGAGAAGATTGTTCAGCAAGCACTTGATAATGTCAT 1670
Query 1668 GGAAAAAAGAACAACAATCGTCGTTGCACATAGATTATCCACCATTCGAAATGTTGACAA 1727
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1671 GGAAAAAAGAACAACAATTGTCGTTGCACATAGATTATCCACCATTCGAAATGTTGACAA 1730
Query 1728 GATTGTTGTCTTGAGAGATGGTCAAGTTAGGGAAACCGGAAGCCACTCAGAACTCATGTT 1787
||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |
Sbjct 1731 GATTGTTGTCTTGAGAGATGGTCAAGTTATGGAAACCGGAAGCCACTCAGAACTAATATC 1790
Query 1788 AAGAGGAGGAGATTATGCGACTCTTGTCAATTGCCAAGAGACAGAACCTCAAGAAAACTC 1847
|||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||
Sbjct 1791 AAGAGGAGGAGATTATGCCACTCTTGTGAATTGTCAAGACACAGAACCTCAAGAAAACTT 1850
Query 1848 GAGATCAATTATGTCTGAAACTTGTAAATCTCAAGCTGGATCTTCTAGTTCAAGAAGAGT 1907
||||||| | |||| |||| |||||||||||||||||||||| | |||||||||||||||
Sbjct 1851 GAGATCAGTCATGTATGAATCTTGTAAATCTCAAGCTGGATCATATAGTTCAAGAAGAGT 1910
Query 1908 TTCTAGCTCAAGGAGGACTTCAAGCTTCAGGGTAGACCAA---GAGAAGACTAAAAATGA 1964
|| ||||||||| |||||||| |||||||||| ||||||| ||||||||| |||| |
Sbjct 1911 TTTTAGCTCAAGAAGGACTTCCAGCTTCAGGGAAGACCAACAAGAGAAGACTGAAAA--A 1968
Query 1965 TGATTCCAAAAA---AG-ACTT--TA-GCTCTTCTTCGATGATATGGGAACTTATAAAGT 2017
||||| ||| || | || || |||| ||||| ||||||||||||||||||||||
Sbjct 1969 -GATTC-AAACGGCGAGGATTTAATAAGCTCGTCTTCAATGATATGGGAACTTATAAAGT 2026
Query 2018 TGAATTCTCCAGAATGGCCATATGCATTACTTGGCTCCATTGGTGCAGTACTTGCTGGAG 2077
||||| |||||||||||| ||||||||||||||||| |||||||| || ||||| |||
Sbjct 2027 TGAATGCTCCAGAATGGCTTTATGCATTACTTGGCTCAATTGGTGCTGTTCTTGCGGGAT 2086
Query 2078 CACAAACTCCATTGTTCTCTATGGGGATTGCTTATGTGTTAACTGCATTTTATTCGCCTT 2137
||||| | |||||||||| |||||| |||||||||||||||| | |||||||||||||
Sbjct 2087 CACAACCGGCATTGTTCTCCATGGGGCTTGCTTATGTGTTAACCACGTTTTATTCGCCTT 2146
Query 2138 TTCCTAATGTGATCAAGCGCGACGTAGAAAAGGTAGCTATTATCTTTGCTGGAGCTGGAA 2197
|||||| | ||||||||||||| || || ||||||||||||||||||| |||||||||||
Sbjct 2147 TTCCTAGTCTGATCAAGCGCGAAGTCGATAAGGTAGCTATTATCTTTGTTGGAGCTGGAA 2206
Query 2198 TAGTAACTGCACCTATATATCTTCTCCAACATTACTTCTATACACTAATGGGAGAGCGTC 2257
||||||| || ||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 2207 TAGTAACAGCGCCTATATATCTTCTCCAACATTACTTCTATACACTTATGGGAGAACGTC 2266
Query 2258 TTACTTCTAGGGTTCGCTTATCCTTGTTCTCAGCGATTCTTTCAAATGAGATTGGATGGT 2317
|||||||| ||||||| ||||||||||||||||| |||||||| |||||||| || ||||
Sbjct 2267 TTACTTCTCGGGTTCGTTTATCCTTGTTCTCAGCAATTCTTTCGAATGAGATCGGGTGGT 2326
Query 2318 TTGATCTGGATGAGAACAACACTGGCTCACTTACTTCAATCTTAGCTGCTGATGCAACTT 2377
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2327 TTGATCTGGATGAGAACAACACTGGCTCACTTACTTCAATCTTAGCTGCTGATGCAACCT 2386
Query 2378 TGGTGAGGAGTGCTCTAGCGGATCGCCTCTCGACAATAGTCCAAAACTTGTCTCTTACAG 2437
|||||||||||||| |||||||||||||||||||||||||||||||| | || ||||||
Sbjct 2387 TGGTGAGGAGTGCTATAGCGGATCGCCTCTCGACAATAGTCCAAAACCTATCACTTACAA 2446
Query 2438 TCACTGCATTGGCACTTGCCTTTTTCTATAGTTGGCGTGTTGCAGCTGTGGTAACGGCTT 2497
|||| || || ||||||||||||| ||| ||||||||||||||||| || ||||| ||||
Sbjct 2447 TCACAGCCTTAGCACTTGCCTTTTACTACAGTTGGCGTGTTGCAGCAGTCGTAACTGCTT 2506
Query 2498 GTTTCCCTCTTCTCATTGCGGCTTCACTTACCGAGCAACTATTTTTAAAAGGCTTTGGAG 2557
||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||
Sbjct 2507 GTTTCCCTCTTCTCATTGCCGCGTCACTTACCGAGCAACTATTTCTAAAAGGCTTTGGAG 2566
Query 2558 GAGATTACACAAGAGCTTACTCTAGGGCAACTTCAGTGGCACGTGAAGCGATTGCAAATA 2617
||||||||||||| ||||||||||| ||||||||| |||| || ||||||||| ||||||
Sbjct 2567 GAGATTACACAAGGGCTTACTCTAGAGCAACTTCATTGGCGCGAGAAGCGATTACAAATA 2626
Query 2618 TAAGAACTGTCGCTGCATATGGTGCCGAAAAGCAGATCTCGGAACAGTTTACTTGTGAGC 2677
|||||||||||||||| | |||||| |||||||| ||||| ||||||||||||||||| |
Sbjct 2627 TAAGAACTGTCGCTGCGTTTGGTGCTGAAAAGCAAATCTCAGAACAGTTTACTTGTGAAC 2686
Query 2678 TAAGCAAGCCCACCAAGAATGCCTTTG-TCAGAGGTCATATCTCTGGATTTGGATACGGT 2736
||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||||
Sbjct 2687 TAAGCAAACCCACCAAGAGTGCCTT-GCTCAGAGGTCATATCTCTGGATTTGGATACGGT 2745
Query 2737 TTGTCTCAGTTTCTTGCGTTCTGTTCCTACGCTCTTGGTCTCTGGTACGTATCGGTTTTG 2796
|||||||||| ||| ||||||||||||||||| ||||||||||||||| | || |||||
Sbjct 2746 TTGTCTCAGTGTCTCGCGTTCTGTTCCTACGCACTTGGTCTCTGGTACATCTCAATTTTG 2805
Query 2797 ATCAATCATAAGGAGACGAATTTTGGGGATAGTATCAAATCCTTCATGGTGTTGATCGTC 2856
|| || | || ||||| || |||| ||||||||||||||| |||||||| ||| |||||
Sbjct 2806 ATTAAGCGCAACGAGACAAACTTTGAGGATAGTATCAAATCTTTCATGGTATTGCTCGTC 2865
Query 2857 ACAGCTTTCTCAGTTTCGGAAACGCTTGCTTTGACCCCAGATATCGTGAAGGGCACGCAA 2916
|| |||| ||| || ||||||||||||| || |||||||||||||| |||||||| |||
Sbjct 2866 ACTGCTTACTCCGTAGCGGAAACGCTTGCGTTAACCCCAGATATCGTAAAGGGCACACAA 2925
Query 2917 GCACTCGGGTCAGTTTTCAGGGTTTTACATAGAGAGACC-AAGATATCTCCAGACCAGCC 2975
||||| ||||| ||||| ||| |||||||||||||||| || ||| |||||||||||||
Sbjct 2926 GCACTAGGGTCGGTTTTTAGGATTTTACATAGAGAGACTGAA-ATACCTCCAGACCAGCC 2984
Query 2976 TAACTCAAGAATGGTTAGTCA-AGTCAAAGGAGATATAGAGTTTAGAAACGTGAGTTTTG 3034
|||||||||| |||| | ||| | ||||||||||||||||||||||||||||||| ||||
Sbjct 2985 TAACTCAAGATTGGTCACTCATA-TCAAAGGAGATATAGAGTTTAGAAACGTGAGCTTTG 3043
Query 3035 TGTATCCCACAAGACCCGAAATTGACATTTTCAAAAACCTAAACCTCCGAGTTTCAGCCG 3094
||||||||| ||||||||||| | ||||||| |||| ||||| ||||||||||||||||
Sbjct 3044 CGTATCCCACGAGACCCGAAATCGCCATTTTCCAAAATCTAAATCTCCGAGTTTCAGCCG 3103
Query 3095 GGAAAAGTCTTGCGGTCGTAGGACCTAGTGGTTCGGGAAAGAGCACGGTGATCGGACTGA 3154
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3104 GGAAAAGTCTTGCGGTCGTGGGACCTAGTGGTTCGGGAAAGAGCACGGTGATCGGACTGA 3163
Query 3155 TCATGAGATTCTACGATCCGAGCAACGG-CAATCTTTGCATCGATGGGCAAGACATAAAA 3213
|||||||||||||||| ||||||||||| || ||| || ||||||||||| || ||||||
Sbjct 3164 TCATGAGATTCTACGACCCGAGCAACGGACA-TCTCTGTATCGATGGGCAGGATATAAAA 3222
Query 3214 ACCCTAAACTTACGTAGCTTGCGCAAGAAGCTAGCGCTAGTTCAACAAGAACCGGCTCTC 3273
|| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 3223 ACTGTAAACCTACGTAGCTTGCGCAAGAAGCTAGCGTTAGTTCAGCAAGAACCGGCTCTG 3282
Query 3274 TTTTCAACAACCATATACGAAAACATTAAGTATGGCAATGAAAACGCATCGGAGGCAGAG 3333
||||||||||||||| |||| ||||| |||||||| || || ||||| ||||||||||||
Sbjct 3283 TTTTCAACAACCATACACGAGAACATCAAGTATGGGAACGAGAACGCGTCGGAGGCAGAG 3342
Query 3334 ATCATGGAAGCTGCGAAAGCGGCGAATGCGCACGAGTTCATTATCAAGATGGAAGAAGGG 3393
||||| |||||||| ||||| || || || ||||||||||| | || |||||||||||||
Sbjct 3343 ATCATTGAAGCTGCCAAAGCCGCAAACGCACACGAGTTCATAAGCAGGATGGAAGAAGGG 3402
Query 3394 TACAAAACGCACGCGGGTGATAAGGGAGTACAATTATCAGGTGGGCAGAAACAGAGAGTG 3453
||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 3403 TACAAGACGCACGTGGGTGATAAGGGAGTACAGTTATCTGGTGGGCAGAAACAGAGAGTG 3462
Query 3454 GCTATCGCGAGGGCGGTTTTAAAGGACCCTTCAGTGCTTCTCCTTGATGAGGCAACAAGT 3513
||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3463 GCTATTGCTAGGGCGGTTTTAAAGGATCCTTCAGTGCTTCTCCTTGATGAGGCAACAAGT 3522
Query 3514 GCTCTGGACACGAGCTCGGAGAAACTAGTCCAAGAGGCGCTAGACAAGCTAATGAAGGGA 3573
||| |||| ||||||||||||||||| ||||||||||||||||||||| | |||||||||
Sbjct 3523 GCTTTGGATACGAGCTCGGAGAAACTGGTCCAAGAGGCGCTAGACAAGTTGATGAAGGGA 3582
Query 3574 CGAACGACGGTATTGGTGGCTCATAGGCTGTCGACCATAAGAAAAGCAGATACGGTCGCT 3633
||||| ||||| |||||||||||||||| |||||||||||||||||||| || ||| |
Sbjct 3583 CGAACAACGGTGCTGGTGGCTCATAGGCTCTCGACCATAAGAAAAGCAGACACAATCGTT 3642
Query 3634 GTGTTGCATAAGGGAAGGGTTGTAGAGAAAGGAAGTCATAGAGAGCTTGTTTC-AA-TAC 3691
||||||||||| |||| ||||| ||||| |||||||| ||||| ||||| || || | |
Sbjct 3643 GTGTTGCATAAAGGAAAAGTTGTGGAGAAGGGAAGTCACAGAGAACTTGTATCTAAAT-C 3701
Query 3692 CTAATGGGTTTTATAAGCAATTGACGAGTCTTCAAGAAGTACTGTGA 3738
| | ||||||||||||| |||||||||||||||||||||| |||||
Sbjct 3702 CGA-TGGGTTTTATAAGAAATTGACGAGTCTTCAAGAAGTGGTGTGA 3747
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141231653403
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5