BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G30810.1 Length=4156 Score E Sequences producing significant alignments: (Bits) Value Ahg336188 jgi|Araly1|336188|fgenesh1_pg.C_scaffold_1002753 2822 0.0 Ahg473311 jgi|Araly1|473311|fgenesh2_kg.1__3265__AT1G30800.1 1077 0.0 Ahg949915 jgi|Araly1|949915|scaffold_801802.1 213 9e-54 > Ahg336188 jgi|Araly1|336188|fgenesh1_pg.C_scaffold_1002753 Length=2544 Score = 2822 bits (1528), Expect = 0.0 Identities = 1739/1842 (94%), Gaps = 10/1842 (1%) Strand=Plus/Plus Query 333 CTCCATTAGAATCTGAGATCAAAGAGGATATGTCTTTGAAGAATCATCCTCCAGACAAGG 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23 CTCCATTAGAATCTGAGATCAAAGAGGATATGTCTTTGAAGAATCATCCTCCAGACAAGG 82 Query 393 ATAAGGACAAAGACACTATCATGGAACAACCTAGTAGTCCACGTCATCGGAAGGTTGTTG 452 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 83 ATAAGGACAAGGACACTATTATGGAACAACCTAGTAGTCCACGTCATCGGAAGGTTGTTG 142 Query 453 CTAGATGGTTACCT-GATGAAGCACAGAGGCCAATTATCAATGACGCTCCCGTATTCACT 511 ||||||||||| || |||||||| |||||||| |||||| |||| ||||| |||||||| Sbjct 143 CTAGATGGTTA-CTGGATGAAGCGCAGAGGCCGATTATCGATGAAGCTCCGGTATTCACC 201 Query 512 CCATCACTAGAGGAGTTTGTAGATCCACTTGCGTATATCGAGAAGATACGTCCACTAGCA 571 |||||| |||||||||||| |||| ||||||| |||||||| |||||||||||||||||| Sbjct 202 CCATCATTAGAGGAGTTTGAAGATACACTTGCTTATATCGAAAAGATACGTCCACTAGCA 261 Query 572 GAGCCGTATGGTATCTGTCGAATCATCCCACCATCGACATGGAAGCCTCCTTGCCGGCTT 631 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 262 GAGCCGTTTGGTATCTGTCGAATCATCCCACCATCGACATGGAAACCTCCTTGCCGGCTT 321 Query 632 AAGGAGAAGAGTATATGGGAGCAGACAAAGTTTCCTACTCGGATTCA-AACCGTAGACCT 690 |||||||||| |||||||||||| ||||||||||| || |||||||| || ||| ||||| Sbjct 322 AAGGAGAAGAATATATGGGAGCAAACAAAGTTTCCCACCCGGATTCAGAA-CGTCGACCT 380 Query 691 GCTTCAGAACCGTGAGCCGATGA-AGAAGAAACCGAAGAGTAGAAAGCGGAAACGGAGAA 749 |||||||||||| |||||||||| | |||||||| ||||||||||| |||||| |||||| Sbjct 381 GCTTCAGAACCGCGAGCCGATGACA-AAGAAACCAAAGAGTAGAAAACGGAAAAGGAGAA 439 Query 750 GAAACTCGAGAATGGGTTCGTCTAAGAGACGATCTGGTTCTTCTCCCGCTGAATCGACTT 809 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 440 GAAACTCGAGAATGAGTTCGTCTAAGAGACGATCTGGTTCTTCTCCCTCTGAATCGACTT 499 Query 810 CATCACCCGAGGCTGAGGAGAAGTTTGGTTTCAATTCTGGTTCAGACTTCACTCTTGATG 869 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 500 CATCTCCCGAGGCTGAGGAGAAATTTGGTTTCAATTCTGGTTCAGACTTCACTCTTGATG 559 Query 870 AGTTTGAGAAATATGCTCTGCATTTTAAAGACTCGTACTTTGAAAAGAAAGACTCTGGTG 929 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 560 AGTTTGAGAAATATGCTCTGCATTTTAAAGACTCTTACTTCGAAAAGAAAGACTCTGGTG 619 Query 930 GAGATATAGTAAAATGGACACCGTCTGTGGATGATATAGAAGGGGAATACTGGCGGATAG 989 ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 620 GAGATGTAGTAAAATGGACACCGTCTGTGGATGAAATAGAAGGCGAATACTGGCGGATAG 679 Query 990 TTGAGCAACCAACAGATGAAGTGGAGGTTTACTATGGAGCTGACTTGGAGAATGGGGTGC 1049 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 680 TTGAGCAACCAACAGATGAAGTGGAGGTATACTATGGAGCTGACTTGGAGAATGGGGTAC 739 Query 1050 TTGGAAGCGGGTTTTATAAAAGAGCCGAGAAGTTTACCGGTAGCGATATGGAGCAGTACA 1109 ||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||| Sbjct 740 TTGGAAGCGGGTTTTATAAAAGAGCGGAAAAGTTAACCGGTAGCGATATGGATCAGTACA 799 Query 1110 CATTATCTGGCTGGAACTTGAATAACTTACCACGGCTTCCTGGCTCTGTACTCTCTTTTG 1169 || ||||||||||||||||||||||| | || || || || |||||||| |||||||||| Sbjct 800 CAGTATCTGGCTGGAACTTGAATAACCTGCCGCGTCTCCCCGGCTCTGTCCTCTCTTTTG 859 Query 1170 AAGATTGTGACATATCCGGAGTTCTAGTTCCATGGCTATATGTGGGAATGTGTTTTTCAT 1229 |||||||||| || || |||||||||||||| ||||| ||||| |||||||| ||||||| Sbjct 860 AAGATTGTGATATCTCTGGAGTTCTAGTTCCTTGGCTCTATGTAGGAATGTGCTTTTCAT 919 Query 1230 CATTTTGTTGGCATGTGGAGGACCATCATTTATATTCACTTAACTATCATCACTTTGGGG 1289 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 920 CATTTTGTTGGCATGTGGAGGACCATCATTTATATTCACTGAACTATCATCACTTTGGGG 979 Query 1290 AGCCAAAAGTATGGTATGGTGTTCCAGGAAGCAATGCAACCGCTCTCGAGAAGGCGATGA 1349 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 980 AGCCAAAAGTATGGTATGGTGTTCCAGGAAGCAATGCAACCGCTCTTGAGAAGGCGATGA 1039 Query 1350 GGAAACATTTACCTGACTTGTTCGAAGAACAGCCTGATCTACTACATGGCCTGGTTACTC 1409 | |||||| | |||||| |||| ||||||||||||||| |||| |||||||||||||||| Sbjct 1040 GAAAACATCTGCCTGACCTGTTTGAAGAACAGCCTGATTTACTTCATGGCCTGGTTACTC 1099 Query 1410 AGTTTTCTCCTTCAATACTGAAAGATGAGGGAGTCCAGGCTTACCGGGTCGTGCAGAATT 1469 |||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| Sbjct 1100 AGTTTTCTCCTTCAATCCTGAAAGATGAGGGAGTCCAGGCTTACCGGGTGGTTCAGAATT 1159 Query 1470 CAGGGGAGTATGTATTGACATTCCCGAGGGCGTATCATGCTGGATTCAACTGCGGTTTCA 1529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1160 CAGGGGAGTATGTATTGACATTCCCGAGGGCGTATCATGCTGGATTCAACTGCGGTTTCA 1219 Query 1530 ACTGCGCAGAAGCGGTTAATGTGGCTCCGGTTGATTGGTTGGCTCATGGACAGAACGCTG 1589 |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 1220 ACTGCGCAGAAGCGGTTAATGTGGCTCCTGTTGATTGGTTGACTCATGGACAGAACGCTG 1279 Query 1590 TGGAACTATATAGTAAAGAGACAAGGAAGACTTCTCTGTCTCACGACAAGCTTCTTCTTG 1649 ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1280 TGGAACTTTACAGTAAAGAGACAAGGAAGACTTCTCTGTCTCACGACAAACTTCTTCTTG 1339 Query 1650 GAGCAGCTTATGAAGCGGTGAAGGCTCTTTGGGAACTCTCAGCTTCTGAGGGAAAGGAAA 1709 |||||||||||||||| || ||| | |||||||||||||||||||||| ||||||||||| Sbjct 1340 GAGCAGCTTATGAAGCTGTTAAGTCCCTTTGGGAACTCTCAGCTTCTGTGGGAAAGGAAA 1399 Query 1710 ATACAACAAATTTGAGATGGAAGAGTTTCTGTGGGAAGAACGGGACACTTACCAACGCGA 1769 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1400 ATACAACAAATTTGAGATGGAAAAGTTTCTGTGGGAAGAACGGGACACTTACCAACGCGA 1459 Query 1770 TACAAGCTCGGTTACAAATGGAAGAGGGGAGAATTACAGCTCTTGGTAGGGATTCTTCAA 1829 | || ||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct 1460 TCCAGGCTCGGTTACAAATGGAAGAGGGAAGAATTGCAGCTCTTGGTAGGGATTCTTCAA 1519 Query 1830 GCTTGAA-GAAGATGGAGAAGGACTTTGATTCAAACTGTGAAAGGGAATGTTTCTCATGC 1888 | | || ||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 1520 TCCT-AATGAAGATGGAGAAGGAGTTTGATTCAAACTGTGAAAGGGAATGCTTCTCATGC 1578 Query 1889 TTTTATGATTTGCATCTCTCGGCTTCTGGCTGCAAGTGCTCTCCCGAAGAATACGCGTGC 1948 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 1579 TTTTATGATTTGCATCTCTCGGCTTCTGGCTGCAAGTGCTCTCCTGACGAATACGCGTGC 1638 Query 1949 CTTAAACATGCAGATGATCTTTGTTCATGTGATGTGAAAGATGGATTTATTCT-TCTCCG 2007 ||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||||| Sbjct 1639 CTTAAGCATGCAGATGATCTTTGTTCATGTGATGAGAAAGATGGATTTATT-TGTCTCCG 1697 Query 2008 GTACACAATGGATGAGTTAAGCTCGTTGGTCAGAGCATTGGAAGGGGAATCAGATGATTT 2067 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1698 GTACACAATGGATGAGTTAAGCTCGTTGGTCAGAGCATTGGAAGGGGAATCAGATGATTT 1757 Query 2068 AAAGATATGGGCTTCCAAGGTTTTAGGCATTGAACATAGTGATGAAGATCAGACAAAGAC 2127 |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1758 AAAGATATGGGCTTCCCAGGTCTTAGGCATTGAACACAGTGATGAAGATCAGACAAAGAC 1817 Query 2128 TAGTTCAGTTATCAGTGAGGAGAAGAAGTTAAAGGAAGGTTC 2169 ||||||||||||||||||||||||||||||||| |||||||| Sbjct 1818 TAGTTCAGTTATCAGTGAGGAGAAGAAGTTAAAAGAAGGTTC 1859 Score = 1085 bits (587), Expect = 0.0 Identities = 631/653 (97%), Gaps = 0/653 (0%) Strand=Plus/Plus Query 2130 GTTCAGTTATCAGTGAGGAGAAGAAGTTAAAGGAAGGTTCTTTTGATCTGAACATTGACT 2189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1892 GTTCAGTTATCAGTGAGGAGAAGAAGTTAAAGGAAGGTTCTTTTGATCTGAACATTGACT 1951 Query 2190 TAGAGATGGATTATCAAGAAGACGTTAAAGAAGAAGCCAGCACTAGTGGCGGCGAGTTAA 2249 ||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct 1952 TAGAGTTGGATTATCAAGAAGGCCTTAAAGAAGAAGTCAGCACTAGTGGCGGCGAGTTAA 2011 Query 2250 CCGCCTCAGAGAACCTTGGTGTATCGGTCGAGCCTATAAACCTCGGGTTCTTGATTTTTG 2309 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2012 CCGCCTCAGAGAACCTTGGTGTATCGGTTGAGCCTATAAACCTCGGGTTCTTGATTTTTG 2071 Query 2310 GAAAGCTTTGGTGCAATAAGTATGCTATATTCCCAAAAGGATTCAGGAGTCGTGTCAAGT 2369 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2072 GAAAGCTTTGGTGCAATAAGCATGCTATATTCCCAAAAGGATTCAGGAGTCGTGTCAAGT 2131 Query 2370 TCTACAATGTTCTTGATCCAACAAGAATGAGCAATTACATCTCTGAGGTTTTGGATGCAG 2429 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2132 TCTACAATGTGCTTGATCCAACAAGAATGAGCAATTACATCTCCGAGGTTTTGGATGCAG 2191 Query 2430 GACTCATGGGTCCATTGTTCAGGGTTACTCTGGAAGAATCTCCAGACGAGAGCTTCTTCA 2489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2192 GACTCATGGGTCCATTGTTCAGGGTCACTCTGGAAGAATCTCCAGACGAGAGCTTCTTCA 2251 Query 2490 ATGTCTCTGCACAACAATGCTGGGAAATGGTGATGCGGAGAGTTAAAGATACATCAACAA 2549 ||||||| || ||||||||||||||||||||| ||| |||||||||||||||||| |||| Sbjct 2252 ATGTCTCAGCCCAACAATGCTGGGAAATGGTGTTGCAGAGAGTTAAAGATACATCCACAA 2311 Query 2550 GTCTTGGTCTTCCTATTTTACCACAGTTTGAGAGTATCAACGGGCTTCAAATGTTTGGTT 2609 ||||||||||||||| ||| | ||||||||| |||||||||| |||||||||||||||| Sbjct 2312 GTCTTGGTCTTCCTACATTATCGCAGTTTGAGGGTATCAACGGTCTTCAAATGTTTGGTT 2371 Query 2610 TCCTCTCACCCTCTATAGTTCAGGCCATTGAAGCTCTTGACCCAAACCATCGACTAGTTG 2669 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2372 TCCTCTCGCCGTCTATAGTTCAGGCCATTGAAGCTCTTGACCCAAACCATCGACTAGTTG 2431 Query 2670 AGTACTGGAACCACAAGAACCAAACTTCATCAGACTCAAAAGATCACTTCATATCATCAA 2729 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2432 AGTACTGGAACCACAAGAACCAAACTTCATCAGACTCAAAAGATCACTTCATATCATCAA 2491 Query 2730 ACTGTTCCGCAAGTTTAACCAAAGGAAAACTTTTCGGAGTAGATTTGATGTAA 2782 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2492 ACTGTTCCGCAAGTTTAACCAAAGGAAAACTTTTCGGAGTAGATTTGATGTAA 2544 > Ahg473311 jgi|Araly1|473311|fgenesh2_kg.1__3265__AT1G30800.1 Length=1011 Score = 1077 bits (583), Expect = 0.0 Identities = 724/791 (92%), Gaps = 14/791 (2%) Strand=Plus/Minus Query 3207 TCAGAACAGAGCCAGAGTCGCCAATGGAAGCAAGAACGAGCCAGTTGAGAAATGTACT-G 3265 |||||||| || ||||| ||||||||||||||||||||||||||||||| |||||| | | Sbjct 778 TCAGAACAAAGTCAGAGCCGCCAATGGAAGCAAGAACGAGCCAGTTGAGTAATGTA-TAG 720 Query 3266 TGGATGCAGAAGCAGAGGTTTGATTGGTGTCACTGTTGGATCCATCGGGATGACGACGGC 3325 ||||||||||| |||||||||||||| ||||||||||||||||| | | || |||| | Sbjct 719 TGGATGCAGAAACAGAGGTTTGATTGTTGTCACTGTTGGATCCA-C--CACGAGGACGAC 663 Query 3326 GACTAGAAGGCTGAAAAGGCCAAGGACGGAGACTATCAGCTAAAGTAGTATCACCGGTAC 3385 ||| || ||| || ||| | ||||||||||||||||||||||||||||||||||||| Sbjct 662 GAC--GACGGC-GATGAGGATATGGACGGAGACTATCAGCTAAAGTAGTATCACCGGTAC 606 Query 3386 CAAAATCGCCGTAACGTGAGAAATCAAGAGACGAAGCAACGCCGTGAATAGCAATTGAAG 3445 |||||||||||||||||||||||||||| ||||||||||| ||||||||||| || |||| Sbjct 605 CAAAATCGCCGTAACGTGAGAAATCAAGCGACGAAGCAACACCGTGAATAGCGATCGAAG 546 Query 3446 AAGAGAGGAAAAGATCCGGTTCAGAGACAAGAACGCCGTCGAGTGCGTAACCGGGAACAG 3505 ||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| Sbjct 545 AAGAGAGGAAAAGATCCGGTTCAGAGACAAGAACGCCGTCGAGAGTATAACCGGAAACAG 486 Query 3506 AGTTGTTAGTGACGACGATTGTGTTTCCGGGGAGAAGAGTCGGAAGACGAGAGAGTGGTT 3565 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 485 AGTTGTTAGTGACGACGATTGAGTTTCCCGGGAGAAGAGTCGGAAGACGAGAGAGTGGTT 426 Query 3566 TGAAGAGACGAAGATCTGTGAAGGAGAGTCGTTGAGGTACGATGTGGTAAGCGACGGAGA 3625 | |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 425 TCAAGAGACGGAGATCAGTGAACGAGAGTCGTTGAGGTACGATGTGGTAAGCGACGGAGA 366 Query 3626 GACGACGGGGATTAGCGTTGTTGTTGCCAGTGGTGGAGGAAGAGGAGGAGGAGATATCAG 3685 |||||||||||| ||| || |||| ||| ||||| | ||||||||||||| ||| | Sbjct 365 GACGACGGGGATAAGCATTATTGTCGCC---GGTGG-TG--GAGGAGGAGGAGACATCGG 312 Query 3686 CGGAGTCGAAATCGCTTGGGATGAAGATAGTGGCGGAGAGAGGGATACCGAATTGGTCAT 3745 ||||||||||||||||||||| ||| || ||||||||||||||||| || || ||||||| Sbjct 311 CGGAGTCGAAATCGCTTGGGACGAAAATGGTGGCGGAGAGAGGGATTCCTAACTGGTCAT 252 Query 3746 CGACGGCGGAGAGAAAATCTGCGGCCCAGTCACGGAAATCTCCGGCTCCGATCATTGCTT 3805 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 251 CGACGGCGGAGAGGAAATCAGCGGCCCAGTCACGGAAATCTCCGGCTCCGATCATTGCTT 192 Query 3806 CGATGATTCTGTCGGCGTGTTGGTGATCTTGGGACGTGAGATACGCTGGAGAAGCGGCGG 3865 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 191 CGATGATTCTGTCGGCGTGTTGGTGATCTTGCGACGTGAGATACGCTGGAGAAGCGGCGG 132 Query 3866 AAGTGAGGAATGTGACGGTGGTGATGAGGAAGAGGAGAAAGAGATGGCTTGAGGTGGCCA 3925 |||| |||||||||||||||||||||||||||| ||||| |||||||| |||||| |||| Sbjct 131 AAGTTAGGAATGTGACGGTGGTGATGAGGAAGAAGAGAAGGAGATGGCCTGAGGTAGCCA 72 Query 3926 TCGGAGATTCAAATCGGCGGCGAAGTTGTAACAGAATGAGAGAGAATCTTTTTGAGTTCG 3985 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 71 TCGGAGAATCAAATCGGCGGCGAAGTTGTAACAGAAAGAGAGAGAATCTTTTTGAGTTCG 12 Query 3986 TTAGGATTCTT 3996 ||||||||||| Sbjct 11 TTAGGATTCTT 1 Score = 309 bits (167), Expect = 1e-82 Identities = 223/247 (90%), Gaps = 15/247 (6%) Strand=Plus/Minus Query 2852 AGATAGAGAGAAGAAATTTCTTTCTGAttttttttttttGTTTTGGGGGCATTTATTATT 2911 ||||||| |||| |||||||||||||| || ||||| |||| || ||| | ||||| Sbjct 1011 AGATAGATAGAATAAATTTCTTTCTGA----TTCTTTTT-TTTT-GGAGCA--T-TTATT 961 Query 2912 CATAATCTTTTGTTCTTATTTATCA-TAGCAAGAACAAATAACCTAACCTTAGCGTTAGT 2970 ||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||| Sbjct 960 CATAATCTTTTGTTCTT-TTTATCACT-GCAAGAACAAATAACCTAACCTTAGCGTTAGT 903 Query 2971 GAAGTGTAAACTAGAAAAGAAAAGTCATAATAATAGAAATTCTTCTTTCAAAAATCAAGA 3030 ||||||||||| |||||||||||||| ||||||||| |||||||||||| ||||||||| Sbjct 902 GAAGTGTAAACAAGAAAAGAAAAGTCGTAATAATAGTAATTCTTCTTTC--AAATCAAGA 845 Query 3031 AAATTTGCTATTGCTTAATGTGAAAAACTTTACATTATGTAACAGAGTTTCACaaaatct 3090 |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct 844 AAATTTGCTATTGCTTAATGTGAAAAACTTTACATTATGTG-CAGAATTTCACAAAATCT 786 Query 3091 tgaaaaa 3097 ||||||| Sbjct 785 TGAAAAA 779 > Ahg949915 jgi|Araly1|949915|scaffold_801802.1 Length=256 Score = 213 bits (115), Expect = 9e-54 Identities = 149/165 (90%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 1496 AGGGCGTATCATGCTGGATTCAACTGCGGTTTCAACT-GCGCAGAAGCGGTTAATGTGGC 1554 ||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||| Sbjct 69 AGGGCGTATCAGGCTGGATTCAACTGCGGTTTCAA-TCGCGCTGAAGCGGTTAATGTGGC 127 Query 1555 TCCGGTTGATTGGTTGGCTCATGGACAGAACGCT-GTGGAACTATATAGTAAAGAGACAA 1613 ||||||| || ||||||||||||||||||| | | || |||||||||||||||||||||| Sbjct 128 TCCGGTTTATCGGTTGGCTCATGGACAGAATG-TCGTAGAACTATATAGTAAAGAGACAA 186 Query 1614 GGAAGACTTCTCTGTCTCACGACAAGCTTCTTCTTGGAGCAGCTT 1658 |||||| |||||||||||| ||||| ||||| || |||||| ||| Sbjct 187 GGAAGATTTCTCTGTCTCATGACAAACTTCTCCTCGGAGCATCTT 231 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 157139718917 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5