BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G30925.1 Length=1125 Score E Sequences producing significant alignments: (Bits) Value Ahg922179 jgi|Araly1|922179|scaffold_103460.1 824 0.0 Ahg336216 jgi|Araly1|336216|fgenesh1_pg.C_scaffold_1002781 508 3e-143 Ahg336203 jgi|Araly1|336203|fgenesh1_pg.C_scaffold_1002768 289 4e-77 Ahg922208 jgi|Araly1|922208|scaffold_103489.1 287 1e-76 Ahg338947 jgi|Araly1|338947|fgenesh1_pg.C_scaffold_2001046 265 6e-70 Ahg922218 jgi|Araly1|922218|scaffold_103499.1 263 2e-69 Ahg922296 jgi|Araly1|922296|scaffold_103577.1 215 6e-55 Ahg922192 jgi|Araly1|922192|scaffold_103473.1 178 8e-44 Ahg336202 jgi|Araly1|336202|fgenesh1_pg.C_scaffold_1002767 159 3e-38 Ahg336233 jgi|Araly1|336233|fgenesh1_pg.C_scaffold_1002798 154 1e-36 Ahg927913 jgi|Araly1|927913|scaffold_300370.1 119 5e-26 Ahg495332 jgi|Araly1|495332|fgenesh2_kg.8__1148__AT5G52620.1 67.6 2e-10 Ahg932652 jgi|Araly1|932652|scaffold_400640.1 56.5 4e-07 > Ahg922179 jgi|Araly1|922179|scaffold_103460.1 Length=2001 Score = 824 bits (446), Expect = 0.0 Identities = 553/605 (91%), Gaps = 6/605 (1%) Strand=Plus/Plus Query 1 ATGGCTTATCCATCTGGTCCTGATGATCATAAAATTCTGACCTTGGGAACTAGAAGAATG 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 306 ATGGCTTATCCATCTGGTCCTGATGATCATAAAATTCTGACCTTGGGAACTCGAAAAATG 365 Query 61 AGGTGGAG-AAAGATCCATTGCCCCTTAACTCATGATCCTTTTTGTGAAGGGATATGCAT 119 |||||||| ||| |||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct 366 AGGTGGAGGAAA-ATCCATTGTCCCTTAACTCATGATCCTTTTTGTGGAGGGATATGCAT 424 Query 120 CAATGGGGTTTTATATTACTTAGCTATCCAAATTGATGAACCCTTGGTTAACCA-AAGGT 178 |||||||||||| ||||||||||||||| ||| ||||||| |||||||||| | ||| | Sbjct 425 CAATGGGGTTTTTTATTACTTAGCTATCAAAAGTGATGAAACCTTGGTTAAT-AGAAGAT 483 Query 179 CTTTTGTGATAGTTTGCTTTGATGTTAGATTTGAAAAATTCACGTTCATTGACGTAGATT 238 ||| ||| |||||||||||||||||||||||||| ||||||| |||||| |||||||| | Sbjct 484 CTTATGTCATAGTTTGCTTTGATGTTAGATTTGAGAAATTCAAGTTCATCGACGTAGAAT 543 Query 239 GCTTTTATCATTTGATAAATTATAAGGGAAAATTAGGTGGGATTGATTGGAAACATGGTA 298 ||||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||| || Sbjct 544 GCTTTTATCATTTAATAAATTATAAGGGAAAATTAGGCGGGATTAATTGGAATTATGCTA 603 Query 299 ACGCTAATGGAAGTCGTACCTTTGAGTTGAGTATGTGGGTTCTTGAGGATGTCGAGAAAC 358 |||| ||||||||||||||||||||||||| ||||||||||| || |||| |||||||| Sbjct 604 GCGCTGATGGAAGTCGTACCTTTGAGTTGAGAATGTGGGTTCTAGATGATGCCGAGAAAC 663 Query 359 ATGAATGGTCGAAATACGACTGCACTTTTCTTGAGTATGAAGTCATGTTCTACAATATT- 417 |||||||||||| ||| |||| |||||||| || |||||||| | |||||||||||| Sbjct 664 ATGAATGGTCGATATATGACTACACTTTTCCCGAACATGAAGTCTTTTTCTACAATATTG 723 Query 418 TCTCTTGCCGTTGGGATGACTGCTACATGTGAAATTGTTTTGTCGGAGAAGTTTGCATCT 477 | |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 724 T-TCTTGCCGTTGGGATGGCTGCTACATGTGAAATTGTTTTGTCGGAGAAGTTTACATCG 782 Query 478 AAATCGTTTTATGTCTTCTACTTCAATCCCGAAAGAGAAACTCTCCAAAGAGTTGAAATC 537 ||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 783 AAACCGTTTTATGTCTTCTACTTCAATCCAGAAAGAGACACTCTCCAAAGAGTTGAAATC 842 Query 538 CAAGGATTGGAGAATCATTGTAGAGTTTACACTATTACAGACCATGTCGAGGATCTTAAT 597 ||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct 843 CAAGGATTGGAGAATCACTGTAGAGTTTACACTATTGCAGACCATGTAGAGGATCTTAAT 902 Query 598 GTTAA 602 ||||| Sbjct 903 GTTAA 907 > Ahg336216 jgi|Araly1|336216|fgenesh1_pg.C_scaffold_1002781 Length=846 Score = 508 bits (275), Expect = 3e-143 Identities = 351/385 (91%), Gaps = 15/385 (4%) Strand=Plus/Plus Query 739 TCTACTACATTGATAAACTATAAGGGTAAAGTAGGTGTGATTAATTTGACGCATGCCTAT 798 ||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||| || Sbjct 415 TCTTCTACATTGATAAACTATAAGGGTAAATTAGGTGTGATTAATTTGAGGCATGCCAAT 474 Query 799 GAACG-TGTATTTCCCCTTCAGTTACGTATGACGGTTCTAGAGGATTTTGAGAAACAGGA 857 | | | | ||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 475 G-ATGTTATATTTCCCCTTCAGTTAAGTATGACGGTTCTAGAGGATTTCGAGAAACAGGA 533 Query 858 ATGGTCGACATATGTCTACACTTTGATGGCTGAGAATATAGTCGTT-A--AG------TA 908 |||||| ||||||||||||||||||||||||||||||||||||||| | || || Sbjct 534 ATGGTCAACATATGTCTACACTTTGATGGCTGAGAATATAGTCGTTAAGGAGAAACACTA 593 Query 909 TGTTTCCGTGGTTGGGATGACTGCTACAGGTGATATTGTTTTGGTGAA-AACAAATGCAT 967 ||||||||| |||||| |||||||||||||||| |||||||||||||| || ||||||| Sbjct 594 TGTTTCCGTTGTTGGGGTGACTGCTACAGGTGAAATTGTTTTGGTGAATAA-GAATGCAT 652 Query 968 GCAAACCGTTTTATGTGTTCTACTTTAATCCCGG-AAGGAACACTCTCCTAAGTGTTGAA 1026 |||||||||||||||||||||||||||| |||| ||| |||||||| || ||||||||| Sbjct 653 GCAAACCGTTTTATGTGTTCTACTTTAA-GCCGGAAAGTAACACTCTTCTGAGTGTTGAA 711 Query 1027 ATCCAAGGTGTTGGAGAAGACCACAAATGCCTCAACTTTCATACAGTTTGCGCCTTTGTA 1086 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 712 ATCCAAGGTGTTGGAGAAGACCACAAATGGTTCAACTTTCATACAGTTTGCGCCTTTGTA 771 Query 1087 GACCATGTAGAGGATCTTCAGTTTA 1111 ||||||||||||||||||||||||| Sbjct 772 GACCATGTAGAGGATCTTCAGTTTA 796 > Ahg336203 jgi|Araly1|336203|fgenesh1_pg.C_scaffold_1002768 Length=963 Score = 289 bits (156), Expect = 4e-77 Identities = 301/369 (82%), Gaps = 17/369 (5%) Strand=Plus/Plus Query 749 TGATAAACTATAAGGGTAAAGTAGGTGTGATTAATTT-GACGCATGCCTATGAACGTGTA 807 |||||||||||||||||||| ||||| |||||||||| ||| |||| || || ||| | Sbjct 542 TGATAAACTATAAGGGTAAATTAGGTTTGATTAATTTAGAC-TATGCTTACGATGGTGGA 600 Query 808 TTTCCCCTTCAGTTACGTATGAC-GGTTCTAGAGGATTTTGAGAAACAGGAATGGTCGAC 866 ||||||||| ||||||||||| | ||||||||||||| | ||||||||||||||| | || Sbjct 601 TTTCCCCTTGAGTTACGTATG-CGGGTTCTAGAGGATGTCGAGAAACAGGAATGGACTAC 659 Query 867 ATATGTCTACACTTTGATGGCTGAGAATATAG---TC--G-TTAAGTA---TGTTTCCGT 917 ||||||||||||||||||||||||||||| || || | |||| | | ||||||| Sbjct 660 ATATGTCTACACTTTGATGGCTGAGAATAAAGCCGTCATGGTTAACAACAATCTTTCCGT 719 Query 918 GGTTGGGATGACTGCTACAGGTGATATTGTTTTGGTGAAA-ACAAATGCATGCAAACCGT 976 |||||| |||||| ||||||| |||||||||| ||| | || ||||| ||||| | Sbjct 720 TGTTGGGGCAACTGCTTCAGGTGAAATTGTTTTGGCGAAGGATAA-TGCATATAAACCTT 778 Query 977 TTTATGTGTTCTACTTTAATCCCGGAAGGAACACTCTCCTAAGTGTTGAAATCCAAGGTG 1036 ||||||| ||||||||||| |||| |||||||||||||| ||||||||| || ||||||| Sbjct 779 TTTATGTTTTCTACTTTAACCCCGAAAGGAACACTCTCCGAAGTGTTGAGATTCAAGGTG 838 Query 1037 TTGGAGAAGACCACA-AATGCCTCAACTTTCATACAGTTTGCGCCTTTGTAGACCATGTA 1095 || ||||||| | | |||| | | ||||| ||||| |||||||||||||||| Sbjct 839 TTAGAGAAGAGGA-AGAATGGTTTGGCGATCATAGAGTTTATTACTTTGTAGACCATGTA 897 Query 1096 GAGGATCTT 1104 ||| ||||| Sbjct 898 GAGAATCTT 906 Score = 145 bits (78), Expect = 8e-34 Identities = 84/87 (97%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 622 ATGGCTTTGGTAAGACGTTTCTTGGCTGCAAAGAAGATTATTGGTGGCTCTGTAGCGAAA 681 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1 ATGGCTGTGGTAAGACGTTTCTTGGCTGCAAAGAAGATTATTGGTGGCTCTGTAGCGGAA 60 Query 682 CTGAGGAAAGAAACTTCAGCAATATTA 708 ||||||||||||| ||||||||||||| Sbjct 61 CTGAGGAAAGAAAATTCAGCAATATTA 87 > Ahg922208 jgi|Araly1|922208|scaffold_103489.1 Length=883 Score = 287 bits (155), Expect = 1e-76 Identities = 304/372 (82%), Gaps = 25/372 (7%) Strand=Plus/Plus Query 747 ATTGATAAACTATAAGGGTAAAGTAG-GTGTGATTAA-TTTGACGCATGCCTATGAACGT 804 |||||||||||||||||| ||||| | ||| |||||| || || | |||| ||||| || Sbjct 485 ATTGATAAACTATAAGGGGAAAGT-GTGTGGGATTAAGTTGGA-GTATGCTTATGATGGT 542 Query 805 GTATTTCCCCTTCAGTT-ACGTATGACGGTTCTAGAGGATTTTGAGAAACAGGAATGGTC 863 | |||||||||| |||| | || || ||||||||||||| ||||||||||||||||||| Sbjct 543 GGATTTCCCCTTAAGTTGA-GTTTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGTC 601 Query 864 GACA-TATGT-CTACACT-TTGATGGCTGAGAAT-AT-AGTCGTTAA--G-TATGTTTCC 915 || | ||| | |||| | | || || | ||||| | || | ||| | || |||| Sbjct 602 GA-ATTAT-TCCTACTGTCTGGA-GGTTAAGAATGTTAAG--GCTAACTGCAATCTTTCT 656 Query 916 GTGGTTGGGATGACTGCTACAGGTGATATTGTTTTGGTGAAAACA-AATGCATGCAAACC 974 || ||||||||||| |||| |||||| ||||||||||| || | |||||| ||||| Sbjct 657 GTTGTTGGGATGACGGCTAGAGGTGAAATTGTTTTGGT-TAAGGAGGATGCATTTAAACC 715 Query 975 GTTTTATGTGTTCTACTTTAATCCCGGAAGGAACACTCTCCTAAGTGTTGAAATCCAAGG 1034 ||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 716 GTTTTATGTTTTCTACTTTAATCCCGAAAGGAACACTCTCCAAAGTGTTGAAATCCAAGG 775 Query 1035 TGTTGGAGAAGACCACAAATGC-CTCAACTTTC-ATACAGTTTGCGCCTTTGTAGACCAT 1092 ||||||||||| ||| ||||| || ||| | | ||| ||||| || ||||||||||||| Sbjct 776 TGTTGGAGAAGTCCAAAAATGGTCT-AACAT-CGATATAGTTTTCGGCTTTGTAGACCAT 833 Query 1093 GTAGAGGATCTT 1104 |||||||||||| Sbjct 834 GTAGAGGATCTT 845 > Ahg338947 jgi|Araly1|338947|fgenesh1_pg.C_scaffold_2001046 Length=1011 Score = 265 bits (143), Expect = 6e-70 Identities = 259/312 (83%), Gaps = 19/312 (6%) Strand=Plus/Plus Query 752 TAAACTATAAGGGTAAAGTAGGTGTGATTAATT-TGACGCATGCCT-ATGAACGTGTATT 809 ||||||||||||| ||| |||||| |||| ||| || | ||| || |||| ||| ||| Sbjct 401 TAAACTATAAGGGCAAATTAGGTGGGATTTATTGGGA-GTATG-CTGATGATGGTGGATT 458 Query 810 TCCCCTTCAGTTA-CGTATGACGGTTCTAGAGGATTTTGAGAAACAGGAATGGTC-GACA 867 ||| ||| ||||| | |||| ||||||||||||| |||||||| | |||||||| || | Sbjct 459 TCCTCTTGAGTTATC-TATGTGGGTTCTAGAGGATCTTGAGAAAAATGAATGGTCGGA-A 516 Query 868 TATGTCTACACTTTGATGGCTGAGAATATAGTCGTTAA-G-----T---ATGTTTCCGTG 918 |||| ||||||||||| |||||| |||| |||||||| | | || |||| || Sbjct 517 TATGCCTACACTTTGAAGGCTGATAATAGCGTCGTTAAGGTTAACTACAATCTTTCTGTT 576 Query 919 GTTGGGATGACTGCTACAGGTGATATTGTTTTGGTGAAAACA-AATGCATGCAAACCGTT 977 |||||| ||||||||| |||||| |||||||||| || || ||||||| |||||||| Sbjct 577 GTTGGGGTGACTGCTAGAGGTGAAATTGTTTTGG-CCAAGCAGTATGCATGTAAACCGTT 635 Query 978 TTATGTGTTCTACTTTAATCCCGGAAGGAACACTCTCCTAAGTGTTGAAATCCAAGGTGT 1037 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 636 TTATGTTTTCTACTTTAATCCCGAAAGGAACACTCTCCTAAGTGTTGAAATCCAAGGTGT 695 Query 1038 TGGAGAAGACCA 1049 |||||||||||| Sbjct 696 TGGAGAAGACCA 707 > Ahg922218 jgi|Araly1|922218|scaffold_103499.1 Length=959 Score = 263 bits (142), Expect = 2e-69 Identities = 304/379 (80%), Gaps = 24/379 (6%) Strand=Plus/Plus Query 749 TGATAAACTATAAGGGTAAAGTAGGTGTGATTAATTTGACGCATGCCTATGAACGTGTAT 808 |||||||||||||||||||| || ||| | ||||||||| | |||| |||| ||| || Sbjct 500 TGATAAACTATAAGGGTAAATTATGTGGGGTTAATTTGAAGTATGCTTATGGTGGTGGAT 559 Query 809 TTCCCCTTCAGTTACGTATGACGGTTCTAGAGGATTTTGAGAAACAGGAATGGTCGACAT 868 |||||||| ||||||||||| ||||||||||||| | |||||| |||||||| || ||| Sbjct 560 TTCCCCTTGAGTTACGTATGTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGTCAT 619 Query 869 ATGTCTACACTTTGATGGCTGAGAATATAGTC------GTTAAGT---ATGTTTCCGTGG 919 ||| ||||||||||| || |||||||| |||| ||||| | || ||||||| | Sbjct 620 ATGCCTACACTTTGAGGGATGAGAATAAAGTCTTTAAGGTTAACTACAATCTTTCCGTTG 679 Query 920 TTGGGATGACTGCTACAGGTGATATTGTTTTGGTGAAAACA-AATGCATGC-AAACCGTT 977 ||||| |||||||| ||||||| |||||||||||| || || ||| ||| | |||||||| Sbjct 680 TTGGGGTGACTGCTTCAGGTGAAATTGTTTTGGTG-AACCATAATACAT-CTAAACCGTT 737 Query 978 TTATGTGTTCTACTTTAATCCCGGAAGGAACACTCTCCTAAGTGTTGAAATCCAAGGTGT 1037 ||||| ||||||||||||||| |||||||||| ||| || ||||||||||||| || | Sbjct 738 ATATGTTTTCTACTTTAATCCCAAAAGGAACACTTTCCAAAATGTTGAAATCCAAAGTTT 797 Query 1038 TGGAG--AAGACCACAAATGCCTCA-AC---TTTCATACAGTTTG-CGCCTTTGTAGACC 1090 ||||| ||| || | | | || |||| | || ||| |||||||||||||| Sbjct 798 TGGAGCTAAG-GGTGAAGCGTTTAAGACTAGTTTCCT--AG-TTGACGCCTTTGTAGACC 853 Query 1091 ATGTAGAGGATCTTCAGTT 1109 |||||||||||||| |||| Sbjct 854 ATGTAGAGGATCTTAAGTT 872 > Ahg922296 jgi|Araly1|922296|scaffold_103577.1 Length=1162 Score = 215 bits (116), Expect = 6e-55 Identities = 425/563 (75%), Gaps = 66/563 (12%) Strand=Plus/Plus Query 23 ATGATCA-TAAAATTCTGACCTTGGGAACTAGAAGAATGAGGTGGAGAAAGATCCATTGC 81 ||||||| | | ||| |||| || |||||| ||| |||||||||||| |||||||| || Sbjct 244 ATGATCACT-ATATTTTGACATTAGGAACTGGAAAAATGAGGTGGAGGAAGATCCAATGT 302 Query 82 CCCTTAACT-CATGATCCTTT--TTGTGAAGGGATATGCATCAATGGGGTTTTATATTAC 138 ||||||| | |||| | ||| |||||||||||||||||||||||||||||| |||||| Sbjct 303 CCCTTAA-TCCATGGT--TTTAGTTGTGAAGGGATATGCATCAATGGGGTTTTGTATTAC 359 Query 139 TTAGCTATCCAAATT-GATG-AACC-CTTGGTTA-ACCAAAGGTCTTTTGTGATAGTTTG 194 |||||| | |||||| ||| ||| || | | | | ||| || ||| ||||||| Sbjct 360 TTAGCT-TACAAATTTGATATAACGTCT-GATGATA--AAAC-TCACTTGC--TAGTTTG 412 Query 195 CTTTGATGTTAGATTTGAAAAATTCACGTTCATTGACGTAGATTGC-TTTT--AT----- 246 |||||||||||| | ||||||| ||| ||| |||| | | | ||| |||| || Sbjct 413 CTTTGATGTTAGGTCTGAAAAAGTCAAGTTTGTTGATGCAAACTGCGTTTTTGATGATTG 472 Query 247 --C-A-T---TTGATAAATTATAAGGGAAAATTAGGTGGGATTGATTGGAAACATGGTAA 299 | | | |||||||| |||||||| ||||| |||| ||| ||||||| ||| | | Sbjct 473 GTCTACTACATTGATAAACTATAAGGGTAAATTCGGTGTTATTAATTGGAAGTATGATGA 532 Query 300 CGCTAATGGAAGTCGTACCTTTGAGTTGAGTATGTGGGTTCTTGAGGATGTCGAGAAACA 359 ||| | | | | || |||||||||||||||||||||| ||||||| ||||||| Sbjct 533 TGCT--T--A--T-G--CCATTGAGTTGAGTATGTGGGTTCTAGAGGATG---AGAAACA 580 Query 360 TGAATGGTCGAAATACGACTGCACTTTTCTTGAG-T-A-TGAAGTC-ATGTTCTACAATA 415 ||||||||| ||||| | || |||||||| ||| | | | ||| | ||| ||| | | Sbjct 581 TGAATGGTCAAAATATGTCTACACTTTTCCGGAGATTAATAAAGCCCATGATCT-CGACC 639 Query 416 TTTCTCTTGCCGTTGG-GATGACTGCTACATGTGAAATTGT-TTTGTC--GGAG-AAGTT 470 || |||| | || | |||||||| || |||||||||| ||| || || | || | Sbjct 640 TTAGACTTGA--T-GGAG-TGACTGCTGCAGGTGAAATTGTATTT-TCAAGGTGGAAATC 694 Query 471 TGCATCTAAATCGTTTTATGTCTTCTACTTCAATCCCGAAAGAGAA-ACTCTCCAAAGA- 528 | ||| |||| |||||||||| || |||| |||||||| ||| ||| |||||||||| | Sbjct 695 TACATGTAAACCGTTTTATGTTTTATACTACAATCCCGGAAG-GAACACTCTCCAAA-AC 752 Query 529 GTTGAAATCCAAGGATT-GGAGA 550 |||||||||||||| || ||||| Sbjct 753 GTTGAAATCCAAGGTTTTGGAGA 775 Score = 145 bits (78), Expect = 8e-34 Identities = 245/320 (77%), Gaps = 33/320 (10%) Strand=Plus/Plus Query 739 TCTACTACATTGATAAACTATAAGGGTAAAGTAGGTGTGATTAATTTGACGCATGCCT-A 797 |||||||||||||||||||||||||||||| | ||||| ||||||| || | ||| | | Sbjct 474 TCTACTACATTGATAAACTATAAGGGTAAATTCGGTGTTATTAATTGGAAGTATGA-TGA 532 Query 798 TGAACGTGTATTTCCCCTTCAGTT-ACGTATGACGGTTCTAGAGGATTTTGAGAAACAGG 856 || | | ||| || || |||| | ||||| ||||||||||||| |||||||| | Sbjct 533 TG--C-T-TATG-CCA-TTGAGTTGA-GTATGTGGGTTCTAGAGGAT---GAGAAACATG 582 Query 857 AATGGTCGACATATGTCTACACTTTGATGGCTGAG-AATATAGTCGTTAAGTAT-GTTTC 914 ||||||| | ||||||||||||||| || || |||| || | | | | | | | Sbjct 583 AATGGTCAAAATATGTCTACACTTTTCCGGA-GATTAATAAAGCCCATGA-TCTCGA--C 638 Query 915 CGTGG--TTG--GGA-TGACTGCTACAGGTGATATTGT-TTT----GGTGAAAA-CAAAT 963 | | | ||| ||| |||||||| ||||||| ||||| ||| |||| ||| | | Sbjct 639 CTTAGACTTGATGGAGTGACTGCTGCAGGTGAAATTGTATTTTCAAGGTGGAAATCTA-- 696 Query 964 GCATGCAAACCGTTTTATGTGTTCTACTTTAATCCCGGAAGGAACACTCTCCTAAGTGTT 1023 |||| |||||||||||||| || |||| |||||||||||||||||||||| || ||| Sbjct 697 -CATGTAAACCGTTTTATGTTTTATACTACAATCCCGGAAGGAACACTCTCCAAAACGTT 755 Query 1024 GAAATCCAAGGTGTTGGAGA 1043 |||||||||||| ||||||| Sbjct 756 GAAATCCAAGGTTTTGGAGA 775 > Ahg922192 jgi|Araly1|922192|scaffold_103473.1 Length=973 Score = 178 bits (96), Expect = 8e-44 Identities = 241/306 (79%), Gaps = 29/306 (9%) Strand=Plus/Plus Query 747 ATTGATAAACTATAAGGGTAAAGTAGGTGTGATTAATTTGACGCATGCCTATGAACGTGT 806 |||||||||||||||||| ||| |||||| ||||||||||| | | | || || || Sbjct 500 ATTGATAAACTATAAGGGGAAATTAGGTGGGATTAATTTGA-AC-T-ACAAT-AA--TGG 553 Query 807 ATTTCCCCTTCAGTTACGTATGACGGTTCTAGAGGATTTTGAGAAACAGGAATGGTCGAC 866 |||||||||| | | |||| ||||||||| ||| | |||||||| |||||||||| Sbjct 554 ATTTCCCCTT-A---A--TATGTGGGTTCTAGAAGATGTCGAGAAACAAGAATGGTCGAA 607 Query 867 ATATGTCTACACTTTGATG-GCTGAGAATATAGTCGTTAA-G-T------ATG-TTTCCG 916 |||||| ||| ||||| || ||||||| || ||||||||| | | | | |||| | Sbjct 608 ATATGTATACTCTTTG-TGTGCTGAGAGTAAAGTCGTTAAGGTTAACCCCAAGCTTTCTG 666 Query 917 TGGTTGGGATGACTGCTACAGGTGATATTGTTTTG--GTGAAAACAAATGCATGC-AAAC 973 | |||||||||||||||||||||||||| |||||| | | || || || | || | Sbjct 667 TTGTTGGGATGACTGCTACAGGTGATATAGTTTTGTCGGGGAAGTTTAT--AT-CTAATC 723 Query 974 CGTTTTATGTGTTCTACTTTAATCCCGGAAGGAACACTCTCCTAAGTGTTGAAATCCAAG 1033 | |||||||| || ||||| ||||||| |||||||||||||||||||||||||||| ||| Sbjct 724 CATTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCCTAAGTGTTGAAATCAAAG 783 Query 1034 GTGTTG 1039 || ||| Sbjct 784 GTCTTG 789 > Ahg336202 jgi|Araly1|336202|fgenesh1_pg.C_scaffold_1002767 Length=384 Score = 159 bits (86), Expect = 3e-38 Identities = 228/294 (78%), Gaps = 20/294 (7%) Strand=Plus/Plus Query 826 ATGACGGTTCTAGAGGATTTTGAGAAACAGGAATGGTCGACATATGTCTACACTTTGATG 885 ||| |||||||||||||| | |||||| ||||||||||| |||||||||||| || || Sbjct 1 ATGTCGGTTCTAGAGGATGTCGAGAAATTGGAATGGTCGAAATATGTCTACAC-TT--TG 57 Query 886 GCTGAGAAT-ATAGTCGT-T-AAGTATGTTTCCGTGGTTGGGATGACTGCTACAGGTGAT 942 || | ||| | | | || | | |||||| || ||||| ||||| |||| |||||| Sbjct 58 CCTCACAATGACATTGGTGTCTACAATGTTTTTGTCGTTGGTATGACGGCTAGAGGTGAA 117 Query 943 ATTGTTTTGG-TGAAAACAAATGCATGC-AAACCGTTTTATGTGTTCTACTTTAATCCCG 1000 |||||||||| || || || ||| | ||||| |||||||| || ||||| ||| ||| Sbjct 118 ATTGTTTTGGCGGAGAA-GTATACAT-CAAAACCATTTTATGTTTTGTACTTCAAT-CCG 174 Query 1001 G-AAGGAACACTCTCCTAAGTGTTGAAATCCAAGGTGTTGGAG-AAGAC-CACAAATGCC 1057 | || ||||||| ||| |||||||||||||||||||||||||| | || || | Sbjct 175 GAAAAGAACACTATCCAAAGTGTTGAAATCCAAGGTGTTGGAGCTA-ACGGTGAAGCGTT 233 Query 1058 TCA-ACT--TTCATACAGTTTGCGCCTTTGTAGACCATGTAGAGGATCTTCAGT 1108 | | ||| || || ||||| |||||||||||||||||||||||||||| ||| Sbjct 234 TGAGACTGATT-GTAGAGTTTACGCCTTTGTAGACCATGTAGAGGATCTT-AGT 285 > Ahg336233 jgi|Araly1|336233|fgenesh1_pg.C_scaffold_1002798 Length=840 Score = 154 bits (83), Expect = 1e-36 Identities = 146/176 (83%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 938 GTGATATTGTTTTGGTGAAAACAAATGCATGCAAACCGTTTTATGTGTT-CTACTTTAAT 996 |||| |||||||||| ||| ||||| || ||| ||||||||||| || |||||||||| Sbjct 494 GTGAAATTGTTTTGGCGAAGGGAAATGTATACAATCCGTTTTATGT-TTACTACTTTAAT 552 Query 997 CCCGGAAGGAACACTCTCCTAAGTGTTGAAATCCAAGGTGTTGGAGAAGACCACAAA-TG 1055 |||| || ||||||||||||||||||||||||||||||||| |||||| | | | || Sbjct 553 CCCGAAAAAAACACTCTCCTAAGTGTTGAAATCCAAGGTGTTAGAGAAGGGGA-AGACTG 611 Query 1056 C-CTCAACTTTCATACAGTTTGCGCCTTTGTAGACCATGTAGAGGATCTTCAGTTT 1110 || ||| |||||| ||||| | ||||||||| |||||||||| |||||||||| Sbjct 612 GTCT-AACATTCATAGAGTTTACTACTTTGTAGATCATGTAGAGGGTCTTCAGTTT 666 > Ahg927913 jgi|Araly1|927913|scaffold_300370.1 Length=336 Score = 119 bits (64), Expect = 5e-26 Identities = 82/90 (91%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 613 AAACACAAAATGGCTTTGGTAAGACGTTTCTTGGCTGCAAAGAAGATTATTGGTGGCTCT 672 ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 13 AAACA-AAAATGGCTTTGGTAAGAGGTTTCATGGCTGCAAAGAAGATTATTGGTGGCTCA 71 Query 673 GTAGC-GAAACTGAGGAAAGAAACTTCAGC 701 ||||| | | | |||||||||||||||||| Sbjct 72 GTAGCAGGAGC-GAGGAAAGAAACTTCAGC 100 > Ahg495332 jgi|Araly1|495332|fgenesh2_kg.8__1148__AT5G52620.1 Length=1068 Score = 67.6 bits (36), Expect = 2e-10 Identities = 88/112 (79%), Gaps = 7/112 (6%) Strand=Plus/Plus Query 31 AAA-ATTCTGACCTTGGGAACTAGAAGAATG-AG-GTGGAGAAAGATCCATTGCCCCTTA 87 ||| |||| ||| || ||||| ||| || | || ||||| | |||||| || | | || Sbjct 513 AAATATTCAGACATTACGAACTGGAA-AA-GTAGCATGGAGGACGATCCAATGTCTCGTA 570 Query 88 -ACTCATGATCCTTTTTGTGAAGGGATATGCATCAATGGGGTTTTATATTAC 138 || ||| ||||| | |||||||||||||||||||||||||||| |||||| Sbjct 571 GAC-CATTATCCTATAAGTGAAGGGATATGCATCAATGGGGTTTTGTATTAC 621 > Ahg932652 jgi|Araly1|932652|scaffold_400640.1 Length=719 Score = 56.5 bits (30), Expect = 4e-07 Identities = 30/30 (100%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 113 TATGCATCAATGGGGTTTTATATTACTTAG 142 |||||||||||||||||||||||||||||| Sbjct 206 TATGCATCAATGGGGTTTTATATTACTTAG 235 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41935208700 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5