BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G30935.1
Length=1555
Score E
Sequences producing significant alignments: (Bits) Value
Ahg922181 jgi|Araly1|922181|scaffold_103462.1 931 0.0
Ahg922183 jgi|Araly1|922183|scaffold_103464.1 869 0.0
Ahg336206 jgi|Araly1|336206|fgenesh1_pg.C_scaffold_1002771 691 0.0
Ahg922179 jgi|Araly1|922179|scaffold_103460.1 494 1e-138
Ahg922215 jgi|Araly1|922215|scaffold_103496.1 412 3e-114
Ahg336209 jgi|Araly1|336209|fgenesh1_pg.C_scaffold_1002774 405 5e-112
Ahg338947 jgi|Araly1|338947|fgenesh1_pg.C_scaffold_2001046 213 3e-54
Ahg473482 jgi|Araly1|473482|fgenesh2_kg.1__3436__AT1G33020.1 211 1e-53
Ahg922295 jgi|Araly1|922295|scaffold_103576.1 152 7e-36
Ahg922217 jgi|Araly1|922217|scaffold_103498.1 145 1e-33
Ahg922214 jgi|Araly1|922214|scaffold_103495.1 145 1e-33
Ahg923021 jgi|Araly1|923021|scaffold_104302.1 80.5 3e-14
Ahg931305 jgi|Araly1|931305|scaffold_303762.1 65.8 9e-10
Ahg931791 jgi|Araly1|931791|scaffold_304248.1 60.2 4e-08
Ahg936065 jgi|Araly1|936065|scaffold_500256.1 58.4 2e-07
Ahg346783 jgi|Araly1|346783|fgenesh1_pg.C_scaffold_5000175 54.7 2e-06
> Ahg922181 jgi|Araly1|922181|scaffold_103462.1
Length=2185
Score = 931 bits (504), Expect = 0.0
Identities = 743/856 (87%), Gaps = 25/856 (3%)
Strand=Plus/Plus
Query 309 CTATGCCTCTGGTTTGATCTATTTTTAAAAAATGTTCATCCCAAAGGAAGATGAGGATGC 368
||||||||||||||||||||||||| | || ||| |||||||| ||||||||| ||||
Sbjct 1079 CTATGCCTCTGGTTTGATCTATTTTCATAATATGCGCATCCCAAGGGAAGATGAAGATGA 1138
Query 369 AAAGCGTGTGTTGTGTGACCCTCTCACTGGCCAGTATGTGATCTTACCTGAACTTAGAGT 428
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1139 AAAGCGTGTGTTGTGTGACCCTCTCACTGGACAGTATGTGATCTTACCTGAACTTAGAGT 1198
Query 429 AGGTGGTTCGTATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTATTGTT 488
|||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1199 AGGTCATTCGTGTAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTTTTGTT 1258
Query 489 CATGGATACTTGTGATTTTATAGCTTCGAAGGATGAAGATCATTATATTTTGACATTGGG 548
|||| ||||| |||||| ||||| || ||||||| ||||||||||||||||||| ||||
Sbjct 1259 CATGAATACTAGTGATTACATAGCGTCTAAGGATGTAGATCATTATATTTTGACACTGGG 1318
Query 549 AACT-GGAGAATTGAAGTGGAGGAAGATCCAATGTCCTTTTACACATGAGCCTTTTTGGG 607
|||| ||| ||||||| ||||||||||||| |||||||||||| ||||||||| | |||
Sbjct 1319 AACTGGGA-AATTGAAATGGAGGAAGATCCGATGTCCTTTTACCCATGAGCCTGTGTGGA 1377
Query 608 AGAGGATATGCATTAATGGGGTTTTGTATTACTCT-GCTTACTATTCTGATTCTAATGGA 666
| ||||| ||||| ||||||||||||||||||| | || || || | ||||||||||
Sbjct 1378 ATAGGATTTGCATCAATGGGGTTTTGTATTACT-TAGC-TA-TA---AG-TTCTAATGGA 1430
Query 667 AGGTCTCATCTCATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAA-TTTCATAGCCAC 725
| || || | ||| |||||||||||||||||||||||||||||| ||| | | ||
Sbjct 1431 TTGCCTTATGTTTTAGTTTGCTTTGATGTTAGGTCTGAGAAATTCAAGCTTC-TTGACAT 1489
Query 726 AAAACATCGGTA-CGA--TCA--G-TTGATAAACTATAAGGGGAAATTATGTGGGATTAA 779
| || | || || || | | | |||||||||||||||||||||||||||||||||||
Sbjct 1490 AGAATACCGTTATGGATTTGATGGATTGATAAACTATAAGGGGAAATTATGTGGGATTAA 1549
Query 780 TTTGGAGTATGCT-AGGCATGTTGGTGGATTTCCTGTTAAGTTGAGTATGTGGGTTTTAG 838
|||| |||||||| | |||| | ||||||||| |||||||||| |||| ||||| |||
Sbjct 1550 TTTGAAGTATGCTTAT-CATG--G-TGGATTTCCAGTTAAGTTGACTATGAGGGTTCTAG 1605
Query 839 AGGATGTCGAGAAACCGGAATGGTCGAAACATGTCTACTCTTTGTGGACGGAGAGTGAAG 898
||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||
Sbjct 1606 AGGATGTCGAGAAACTGGAATGGTCGAAACATGACTACTCTTTGTGGGTGGAGAGTAAAG 1665
Query 899 TCGTTAAGGTTAACCGGAATCTTTCTGTTTCTGGGATGACTGCAACCGGTGACATTGTTT 958
|||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1666 TCGTTAAGGTTAACAATAATCTTTCCGTTTCTGGGATGACTGCTACCGGTGACATTGTTT 1725
Query 959 TATCGATGGAAG-ATGCAACTAATCCGTTTTATGTTTTCAACTTCAATCCGGATAGGAAC 1017
| |||||| || ||| | | ||||||| ||| ||||| ||||||||||||| || |||
Sbjct 1726 TGTCGATG-AATTATGTATCCAATCCGTGTTACATTTTCTACTTCAATCCGGAAAGAAAC 1784
Query 1018 ACTCTCCAAGTCCAAAGTGTTGAAATCCAAGGTCTTGGAGCTAATCGTGATCACATAGCT 1077
|| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct 1785 ACCCTCCAAGTCCAAAGTGTTGAAATCCAAGGTCTTGGTGCTAATCGTGATTGCATATCT 1844
Query 1078 TGCCATGCCTTTGTTGACTATGTAGAAGATTTTAGTGTTAGCGATGCAGTGCTGCAACTC 1137
||| | |||||||| ||||||||||| ||| ||||||||| ||||||| |||||||||||
Sbjct 1845 TGCTACGCCTTTGTAGACTATGTAGAGGATCTTAGTGTTAACGATGCAATGCTGCAACTC 1904
Query 1138 AAGTCAAGCCCTTTAC 1153
||||||||||||||||
Sbjct 1905 AAGTCAAGCCCTTTAC 1920
Score = 797 bits (431), Expect = 0.0
Identities = 717/851 (84%), Gaps = 36/851 (4%)
Strand=Plus/Plus
Query 320 GTTTGATCTATTTTTAAAAAATGTTCATCCCAAAGGAAGATGAGGATGCAA-AGCGTGTG 378
|||||||||||||| | || ||| |||||||||||||||||| |||| || ||||||||
Sbjct 1 GTTTGATCTATTTTCATAATATGCGCATCCCAAAGGAAGATGAAGATG-AACAGCGTGTG 59
Query 379 TTGTGTGACCCTCTCACTGGCCAGTATGTGATCTTACCTGAACTTAGAGTAGGTGGTTCG 438
|||| ||||||||||||||| |||||||||||||||||| ||||| || ||||| |||
Sbjct 60 TTGTATGACCCTCTCACTGGACAGTATGTGATCTTACCTCAACTT--AG-AGGTGAATCG 116
Query 439 TATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTATTGTTCATGGATACT 498
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 117 GATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTATTGGTCATGAATACT 176
Query 499 TGTGATTTTATAGCTTCGAAGGATGAAGATCATTATATTTTGACAT-TGGGAACT-GGAG 556
|| ||| || ||||| || |||| ||||||| |||||||||| | |||||||| |||
Sbjct 177 AGTTATTATACAGCTTATAATGATGTAGATCATCATATTTTGAC-TGTGGGAACTGGGA- 234
Query 557 AATTGAAGTGGAGGAAGATCCAATGTCCTTTTACACATGAGCCTTTTTGGGAGAGGATAT 616
|| ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 235 AACTGAGGTGGAGGAAGATCCAATGTCCTTTTACTCATGAGCCTTTTTGGGAAAGGATAT 294
Query 617 GCATTAATGGGGTTTTGTATTACTCT-GCTTACTATTCTGATTCTAATGGAAGGTCTCAT 675
||||||||||| |||||||||||| | || | ||| |||||| ||||||||| | |
Sbjct 295 GCATTAATGGGATTTTGTATTACT-TAGC-T-CTA----GATTCTGATGGAAGGTATTTT 347
Query 676 CTCATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAATTTCATAGCCACAAAACATCGG 735
| ||| ||||||||||||| | |||||||||||||| || | | | | || ||
Sbjct 348 ATGGTAGTTTGCTTTGATGTTCGATCTGAGAAATTCAAGCTCGTTGATATAGAATGCCGT 407
Query 736 TACGATC-AGTTGATAAACTATAAGGGGAAATTATGTGGGATTAATTTGGAGTATGCTAG 794
| |||| | | | ||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 408 TTTGATCAACTCG-TAAACTATAAGGGGAAATTATGTGGGATTGATTTGAAGAATGCT-- 464
Query 795 GCATGT-TGGTGGATTTCCTGTTAAGTTGA-GTATGTGGGTTTTAGAGGATGTCGAGAAA 852
|| | |||||||||||| || |||| | ||||||||||| |||| |||||| |||||
Sbjct 465 -TAT-TATGGTGGATTTCCCCTTGAGTT-ACGTATGTGGGTTCTAGAAGATGTCCAGAAA 521
Query 853 CCGGAATGGTCGAAACATGTCTACTCTTTG-TGGACGGAGAGTGAAGTCGTTAAGGTTAA 911
| ||||||||||||| |||||||| ||||| ||| || | | ||||||||||||||||
Sbjct 522 CGGGAATGGTCGAAATATGTCTACACTTTGAGGGA-TGATAATAAAGTCGTTAAGGTTAA 580
Query 912 CCGGAATCTTTCTGTTTCTGGGATGACTGCAACCGGTGACATTGTTTTATCGATGGAA-G 970
| |||||||||||||||||||||||||| ||||||||||||||||| | | | |||
Sbjct 581 CTATAATCTTTCTGTTTCTGGGATGACTGCTACCGGTGACATTGTTTTGTTG-TTGAATA 639
Query 971 ATGCAACTAATCCGTTTTATGTTTTCAACTTCAATCCGGATAGGAACACTCTCCAAGTCC 1030
||||| ||||||||| |||||||| | ||||||||||||| ||||||||||||||| |||
Sbjct 640 ATGCATCTAATCCGTATTATGTTTCCTACTTCAATCCGGAAAGGAACACTCTCCAAATCC 699
Query 1031 AAAGTGTTGAAATCCAAGGTCTTGGAGCTAATCGTGATCACATAGC---TTGCCATGCCT 1087
||||||||||||||||||||||| |||||||| |||||| ||| || || | | ||||
Sbjct 700 AAAGTGTTGAAATCCAAGGTCTTCGAGCTAATTGTGATCGCATGGCTTATTACTACGCCT 759
Query 1088 TTGTTGACTATGTAGAAGATTTTAGTGTTAGCGATGCAGTGCTGCAACTCAAGTCAAGCC 1147
|||| ||||||||||| ||| ||||||||| |||||| | ||||||||||||||||||
Sbjct 760 TTGTAGACTATGTAGAGGATCTTAGTGTTAACGATGC---GATGCAACTCAAGTCAAGCC 816
Query 1148 CTTTACAACAA 1158
|||||||||||
Sbjct 817 CTTTACAACAA 827
> Ahg922183 jgi|Araly1|922183|scaffold_103464.1
Length=1129
Score = 869 bits (470), Expect = 0.0
Identities = 729/851 (86%), Gaps = 30/851 (4%)
Strand=Plus/Plus
Query 320 GTTTGATCTATTTTTAAAAAATGTTCATCCCAAAGGAAGATGAGGATGCAAAGCGTGTGT 379
|||||||||||||| | || ||| |||||||||||||||||| ||||||||||||||||
Sbjct 1 GTTTGATCTATTTTCATAATATGCGCATCCCAAAGGAAGATGAAGATGCAAAGCGTGTGT 60
Query 380 TGTGTGACCCTCTCACTGGCCAGTATGTGATCTTACCTGAACTTAGA-GT-AGGT-G-GT 435
| |||||||||||||| || || ||||| |||||||||||||||||| || | | | |
Sbjct 61 TATGTGACCCTCTCACAGGACAATATGTTATCTTACCTGAACTTAGAGGTCA-CTCGTAT 119
Query 436 TCGTATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTATTGTTCATGGAT 495
||||||| |||||||||||||||||| || || |||||||||||||| ||||||||| ||
Sbjct 120 TCGTATAACTATTTAGGGTTTGATCCAATAGACAAGGAATTCAAGGTTTTGTTCATGAAT 179
Query 496 ACTTGTGATTTTATAGCTTCGAAGGATGAAGATCATTATATTTTGACATTGGGAACTGGA 555
||| ||||||||||||| || ||||||| ||||||| ||||||||||| | ||| |||||
Sbjct 180 ACTAGTGATTTTATAGCGTCTAAGGATGTAGATCATCATATTTTGACACTAGGAGCTGGA 239
Query 556 GAATTGAAGTGGAGGAAGATCCAATGTCCTTTTACACATGAGCCTTTTTGGGAGAGGATA 615
|||||||| ||||||||||||| |||||||||||| ||||||||| ||| | |||||
Sbjct 240 GAATTGAAATGGAGGAAGATCCGATGTCCTTTTACCCATGAGCCTGGGTGGAATAGGATT 299
Query 616 TGCATTAATGGGGTTTTGTATTACTCT-GCTTACTATTCTGATTCTAATGGAAGGT-CTC 673
||||| ||||||||||||||||||| | || | ||| | ||||| |||| |||| ||
Sbjct 300 TGCATCAATGGGGTTTTGTATTACT-TAGC-T-CTA--C--ATTCTGATGG-AGGTCCTT 351
Query 674 ATCTCATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAATTTCATA-GC-CACAAA-AC 730
|| | |||| ||||||||||||||| |||||||||||||| |||||| || || ||| ||
Sbjct 352 ATGTGATAGTTTGCTTTGATGTTAGTTCTGAGAAATTCAAGTTCATAGGCGCA-AAAGAC 410
Query 731 ATCGGTACGATCAGTTGATAAACTATAAGGGGAAATTATGTGGGATTAATTTGGAGTATG 790
|| | ||||||||||| ||||||||||| |||||||||||| ||||| ||||| |||
Sbjct 411 TTC--CATGATCAGTTGATTAACTATAAGGGAAAATTATGTGGGGTTAATGTGGAGCATG 468
Query 791 CTAGGCATGTTGGTGGATTTCCTGTTAAGTTGAGTATGTGGGTTTTAGAGGATGTCGAGA 850
|| ||| |||||||||||| ||||||||| ||||||||||| |||| |||||| |||
Sbjct 469 ATA---ATGGTGGTGGATTTCCCGTTAAGTTGTGTATGTGGGTTCTAGAAGATGTCCAGA 525
Query 851 AACCGGAATGGTCGAAACATGTCTACTCTTTGTGGACGGAGAGTGAAGTCGTTAAGGTTA 910
|||| |||||||| ||| |||||||| ||||| || | || | | |||||||||| ||||
Sbjct 526 AACCTGAATGGTCCAAATATGTCTACACTTTGAGGGCTGATAATAAAGTCGTTAATGTTA 585
Query 911 AC-CGGAATCTTTCTGTTTCTGGGATGACTGCAACCGGTGACATTGTTTTATCGATGGAA 969
|| | ||| |||||||||||||||||||||| ||||||||||||||||| ||| | |||
Sbjct 586 ACTC-TAATATTTCTGTTTCTGGGATGACTGCTACCGGTGACATTGTTTTGTCG-TTGAA 643
Query 970 GAT-GCAACTAATCCGTTTTATGTTTTCAACTTCAATCCGG-ATAGGAACACTCTCCAAG 1027
|| ||| | |||| || |||||||||| |||||||||||| || |||||||||||||||
Sbjct 644 TATGGCATCCAATCTGTATTATGTTTTCTACTTCAATCCGGAAT-GGAACACTCTCCAAG 702
Query 1028 TCCAAAGTGTTGAAATCCAAGGTCTTGGAGCTAATCGTGATCACATAGCTTGCCATGCCT 1087
|||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||
Sbjct 703 TCCAAAGTGTTGAAATCCAAGGTCTTGGAGCTAATCGTGATCGCATAGCTTACTACGCCT 762
Query 1088 TTGTTGACTATGTAGAAGATTTTAGTGTTAGCGATGCAGTGCTGCAACTCAAGTCAAGCC 1147
|||| ||||||||||| ||| ||||||||| ||||||| |||||| | ||||||||||||
Sbjct 763 TTGTAGACTATGTAGAGGATCTTAGTGTTAACGATGCACTGCTGCCATTCAAGTCAAGCC 822
Query 1148 CTTTACAACAA 1158
|||||||||||
Sbjct 823 CTTTACAACAA 833
> Ahg336206 jgi|Araly1|336206|fgenesh1_pg.C_scaffold_1002771
Length=2166
Score = 691 bits (374), Expect = 0.0
Identities = 684/826 (83%), Gaps = 51/826 (6%)
Strand=Plus/Plus
Query 345 CATCCCAAAGGAAGATGAGGATGCAAAGCGTGTGTTGTGTGACCCTCTCACTGGCCAGTA 404
|||||||||||||||||| |||| |||||||||||| |||||||||||||| || || ||
Sbjct 6 CATCCCAAAGGAAGATGAAGATGAAAAGCGTGTGTTATGTGACCCTCTCACAGGACAATA 65
Query 405 TGTGATCTTACCTGAACTTAGA-GT-AGGT-G-GTTCGTATAGCTATTTAGGGTTTGATC 460
||| |||||||||||||||||| || | | | ||||||||||||||||||||||||||
Sbjct 66 TGTTATCTTACCTGAACTTAGAGGTCA-CTCGTATTCGTATAGCTATTTAGGGTTTGATC 124
Query 461 CGATTGATAAGGAATTCAAGGTATTGTTCATGGATACTTGTGATTTTATAGCTTCGAAGG 520
|| ||||||||||||||||||| ||||||||| ||||| |||||||||| |||| ||
Sbjct 125 CGGTTGATAAGGAATTCAAGGTGTTGTTCATGAATACTAGTGATTTTATGGCTTATAATT 184
Query 521 ATGA-AGATCATTATATTTTGACATTGGGAACTGGAGAATTGAAGTGGAGGAAGATCCAA 579
|| | ||||||| ||||||||||| | ||| ||||||||||||| |||||||||||||||
Sbjct 185 AT-ACAGATCATCATATTTTGACACTAGGAGCTGGAGAATTGAAATGGAGGAAGATCCAA 243
Query 580 TGTCCTTTTACACATGAGCCTTTTTGGGAGAGGATATGCATTAATGGGGTTTTGTATTAC 639
||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 244 TGTCCTTTTACTCATGAGCCCTTTTGGGAAAGGATATGCATTAATGGAGTTTTGTATTAC 303
Query 640 TCTGCT-TACTATTCTGATTCTAAT-G--GAAGGTCTCATCTCATAGCTTGCTTTGATGT 695
|| ||| || |||||||||||| | | ||||||| || | |||| ||||||||||||
Sbjct 304 TCAGCTCAAC-ATTCTGATTCTAGTCGAAAAAGGTCTTATGTGATAGTTTGCTTTGATGT 362
Query 696 TAGGTCTGAGAAATTCAATTTCATA-GCCACAAAACATCGGT-ACGATCAGTTGATAAAC 753
|||||||||||||||||| |||||| || || ||| | || | | |||||||||||||
Sbjct 363 TAGGTCTGAGAAATTCAAGTTCATACGCG-CAGAACG-CTGTCATGGTCAGTTGATAAAC 420
Query 754 TATAAGGGGAAATTATGTGGGATTAATTTGGAGTATGCTAGGCATGTTGGTGGATTTCCT 813
||||||||||| ||||||||| ||||| || ||||| | | || |||||| |||||
Sbjct 421 TATAAGGGGAAGTTATGTGGGGTTAATGTGTAGTATAATTG---TGGTGGTGGTTTTCCC 477
Query 814 GTTAAGTTGAGTATGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCGAAACATGTC 873
|||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||
Sbjct 478 CTTAAGTTGAGTATGTGGGTTCTAGAGGATGTCGAGAAACCGGAATGGTCTAAATATGTA 537
Query 874 TACTCTTTGTGGACGGAGAGTGAAGTCGTTAAGGTTAACCGGAATCTTTCTGTTTCTGGG 933
|||||||||||| | || | | | | ||| || ||| ||||||| |||||||||
Sbjct 538 TACTCTTTGTGGGCTGA---T-A--T--TAAAG-TTGCCCGCTATCTTTCCGTTTCTGGG 588
Query 934 ATGACTGCAACCGGTGACATTGTTTTATCGATGGAAGATGCAACTAATCCGTTTTATGTT 993
|||||||| ||||||||||||||||| ||||||||| | | |||| || ||||||||
Sbjct 589 ATGACTGCTACCGGTGACATTGTTTTGTCGATGGAAAACACGTCTAACCCATTTTATGTC 648
Query 994 TTCAACTTCAATCC-GGATAGGAACACTCTCCAAGTCCAAAGTGTTGAAATCCAAGGTCT 1052
||| |||||||||| ||| ||||| ||||| ||| | ||||||||||||||||| |
Sbjct 649 TTCTACTTCAATCCCGGA-AGGAAAACTCTTCAA-T-----GTGTTGAAATCCAAGGTTT 701
Query 1053 TGGAGCTAATCGTGATCACATAGCTTGCCATGCCTTTGTTGACTATGTAGAAGATTTTAG 1112
||| | |||||||| | | | || | ||||||| ||||||||||| ||| ||||
Sbjct 702 TGGTGGTAATCGTG-T----T---T-GC-A--CCTTTGTAGACTATGTAGAGGATCTTAG 749
Query 1113 TGTTAGCGATGCAGTGCTGCAACTCAAGTCAAGCCCTTTACAACAA 1158
| ||| || || | ||| ||| |||||||||||||||||||||
Sbjct 750 TATTAACGTTGAAATGCAA-AAC--AAGTCAAGCCCTTTACAACAA 792
Score = 582 bits (315), Expect = 2e-165
Identities = 734/920 (80%), Gaps = 94/920 (10%)
Strand=Plus/Plus
Query 275 AGTTTTCTTCAGGGAAAAGCAGACATC-AGTGCACCTATGCCTCTGGTTTGATCTATTTT 333
|||| ||| ||||| |||| || | | | || | ||||||||||||||||||||| |
Sbjct 1160 AGTTGTCTAAAGGGATAAGCCGATA-CAATTGTAGCTATGCCTCTGGTTTGATCTA---T 1215
Query 334 TAAAAAATGTTCATCCCAAAGGAA-GATGAGGATGCAAAGCGTGTG-TTGTGTGACCCTC 391
| | | | ||| || ||| || |||||||||| |||||||||| || ||| |||| |
Sbjct 1216 T---ATA-G--CAT-CCGAAGCAAGGATGAGGATGAAAAGCGTGTGATT-TGTAACCCCC 1267
Query 392 TCACTGGCCAGTATGTGATCTTACCTGAACTTAGAGTAGG----T-G----G-T-T-C-- 437
|||| || |||||||||||||||||||||||||||||||| | | | | | |
Sbjct 1268 TCACAGGACAGTATGTGATCTTACCTGAACTTAGAGTAGGTCATTCGTATAGCTATACAA 1327
Query 438 -GTATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTATTGTTCATGGATA 496
|| |||||||||| |||||||||||| || ||||||||||||||||||||||| || |
Sbjct 1328 TGTTTAGCTATTTAATGTTTGATCCGATAGACAAGGAATTCAAGGTATTGTTCAT-GA-A 1385
Query 497 -CTT-GT-GATTTTATAGCTTCGAAGGATGAAGATCATTATATTTTGACATTGGGAACT- 552
||| | | || || ||||| || ||| ||||||||||||||||||| ||||||||
Sbjct 1386 CCTTAATCG-TTATACAGCTTATAATTATGTAGATCATTATATTTTGACACTGGGAACTG 1444
Query 553 GGAGAATTGAAGTGGAGGAAGATCCAATGTCCTTTTACACATGAGCCTTTTT--GGGAGA 610
||| |||||| ||||||||||||||||||||||||||| |||||| |||||| |||| |
Sbjct 1445 GGA-AATTGAGGTGGAGGAAGATCCAATGTCCTTTTACCCATGAG-CTTTTTGAGGGA-A 1501
Query 611 GGATATGCATTAATGGGGTTTTGTATTACTCTGCT-TACTATTCTGATTCTAAT-G--GA 666
|||||||||||||||| |||||||||||||| ||| || ||||||||||| || | ||
Sbjct 1502 GGATATGCATTAATGGAGTTTTGTATTACTCAGCTGAAC-ATTCTGATTCTGATGGAAGA 1560
Query 667 AGGTCTCATCTCATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAATTTCATAGCCACA 726
|||||| | | ||| |||||||||||||||||| ||||||||||| ||||||| | ||
Sbjct 1561 AGGTCTTGTGTGTTAGTTTGCTTTGATGTTAGGTCCGAGAAATTCAAGTTCATAGGCGCA 1620
Query 727 A-AACATCGGT-ACGATCAGTTGATAAACTATAAGGGGAAATTATGTGGGATTAATTTGG 784
| || | | || | ||||| |||||||||||||||| |||||||||| ||||||| |||
Sbjct 1621 AGAA-A-CTGTCATTATCAGCTGATAAACTATAAGGGAAAATTATGTGAGATTAATGTGG 1678
Query 785 AGTATGCTAGGCATGTTGGTGGATTTCCTGTTAAGTTGAGTATGTGGGTTTTAGAGGATG 844
|||||||| ||| |||| ||||||| |||||||||||||||||| |||||||||
Sbjct 1679 AGTATGCT---TATGATGGTAGATTTCCCCCCAAGTTGAGTATGTGGGTTCTAGAGGATG 1735
Query 845 TCGAGAAACCGGAATGGTCGAAACATGTCTACTCTTTGTGGACGGAGAGTGAAGTCGTTA 904
||||||||||||||||||||||| |||| ||||||||| | | | ||| | || |
Sbjct 1736 TCGAGAAACCGGAATGGTCGAAATATGTGTACTCTTTG-G-ATGTTGAG--A-GTA---A 1787
Query 905 AGGTTAACCGGA-ATCTTT-CTGTTTCTGGGATGACTGCAACCGGTGACATTGTTTTATC 962
|| || || | |||||| | ||||||||||||||||| ||||||||||||||||| |
Sbjct 1788 AG-TTG-CCAGCTATCTTTAC-GTTTCTGGGATGACTGCTACCGGTGACATTGTTTTGTT 1844
Query 963 GATGGA-AGATGCAACTAATCCGTTTTATGTTTTCAACTTCAATCCGGATAGGAACACTC 1021
|||||| | | || |||| || |||||||| ||| ||||||||||||| ||||| ||||
Sbjct 1845 GATGGATA-ACACATCTAACCCTTTTTATGTCTTCTACTTCAATCCGGAAAGGAAAACTC 1903
Query 1022 TCCAAGTCCAAAGTGTTGAAATCCAAGGTC-TTGGA-GCTAATCGTGATCACATAGCTTG 1079
| || ||| ||||||||||||||| | ||||| | |||||||| | | | |
Sbjct 1904 T-----TC-AAATTGTTGAAATCCAAGG-CATTGGAAG-TAATCGTG-T----T---T-G 1946
Query 1080 CCATGCCTTTGTTGACTATGTAGAAGATTTTAGTGTTAGCGATGCAGTGCTGCAACTCAA 1139
| | ||||||| ||||||||||| ||| ||||||||| || |||| |||||| |||
Sbjct 1947 C-A--CCTTTGTAGACTATGTAGAGGATCTTAGTGTTAACGTTGCA---CTGCAAAACAA 2000
Query 1140 GTCAAGCCCTTTACAACAAC 1159
|||||||||||||||| |||
Sbjct 2001 GTCAAGCCCTTTACAAGAAC 2020
> Ahg922179 jgi|Araly1|922179|scaffold_103460.1
Length=2001
Score = 494 bits (267), Expect = 1e-138
Identities = 686/877 (78%), Gaps = 74/877 (8%)
Strand=Plus/Plus
Query 309 CTATGCCTCTGGTTTGATCTATTTTTAAAAAATGTTCATCCCAAAGGAAGATGAGGATGC 368
||||||||||||||||||||||||| | || |||| |||||||| ||| ||||||||| |
Sbjct 1007 CTATGCCTCTGGTTTGATCTATTTTCATAATATGTGCATCCCAAGGGAGGATGAGGATAC 1066
Query 369 AAAGCGTGTGTTGTGTGACCCT-CTCACTGGCCAGTATGTGATCTTACCTGAACTTAG-- 425
|||||||||| | ||| ||||| | ||| || ||||||||||||||||||||||| ||
Sbjct 1067 AAAGCGTGTGATATGTAACCCTAC-CACCGGACAGTATGTGATCTTACCTGAACTGAGAA 1125
Query 426 AGTAGGTGGT-TCGTATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTAT 484
|| | | | ||||| |||||||||||||||||||| || || ||||||||||||||||
Sbjct 1126 AGCACTTCATGTCGTACAGCTATTTAGGGTTTGATCCAATAGACAAGGAATTCAAGGTAT 1185
Query 485 TGTTCATGGATACTTGTGATTTTATAGCTTCGAAGGATGA-AGATCATTATATTTTGACA 543
|| ||||| | ||| ||| || |||||||| || ||| | ||||||| |||||||||||
Sbjct 1186 TGCTCATGAACACTAGTGGTTATATAGCTTATAATGAT-ACAGATCATCATATTTTGACA 1244
Query 544 TTGGGAACTGGAGAATTGAAGTGGAGGAAGATCCAATGTCCTTTT-ACACATGAGCCTTT 602
|| ||||||||| || ||| |||||| ||||| || ||||||||| || |||||||||||
Sbjct 1245 TTAGGAACTGGAAAAATGAGGTGGAGAAAGATTCAGTGTCCTTTTAAC-CATGAGCCTTT 1303
Query 603 TTGGGAGAGGATATGCATTAATGGGGTTTTGTATTACTCTGCTTACTATTCTGATTCTAA 662
|||||| ||||||||||| |||||||||||||||||| || | | | | | || | |
Sbjct 1304 TTGGGAAAGGATATGCATCAATGGGGTTTTGTATTACAAAGC-T-C-A-CCAG-TT-TGA 1357
Query 663 TGGAAGGTCTCATCTCATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAATTTCAT--A 720
|||||||||| || | |||| |||||||||||||||||||||||||||||| ||||| |
Sbjct 1358 TGGAAGGTCTTATGTAATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCAAGTTCATTGA 1417
Query 721 GCCA-CAA-----AACATCGGT-ACGATCAGTTGATAAACTATAAGGGGAAATTATGTG- 772
| || || || || | | || ||| ||||||||||||||||| |||||| |||
Sbjct 1418 GGCAACATTTTGTAATAT-GTTTAC--TCAATTGATAAACTATAAGGGTAAATTAGGTGT 1474
Query 773 GGATTAATTTGGAGTATGCT-A-G--G---CATGTTGGT-GG-ATTTCCTGTTAAGTTGA 823
|| |||||||| || ||| | | | | || ||| | || || ||| | | |||
Sbjct 1475 GG-TTAATTTGAAGAATGTTGATGATGGTACAAGTTT-TAGGCATACCCT-TGA-GTTTC 1530
Query 824 GTATGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCGAAACATGTCTACTCTTTGT 883
||||||||||| | ||| |||| |||||| |||||||||| || |||||||| ||||||
Sbjct 1531 GTATGTGGGTTCTGGAGCATGTTGAGAAAATGGAATGGTCGGAATATGTCTACACTTTGT 1590
Query 884 -GGACGG-AGAGTGAAGTC-GTTAAGG-T-TAACCG--GAATCTT-TCTGTT-TCTGGGA 934
||| | | | ||||| | | | | | | | | || |||| | |||| || ||||
Sbjct 1591 TGGATAGTA-A-TGAAG-CAGCTGATGATCTTGTTGTTGA-TCTTGT-TGTTGTC-GGGA 1644
Query 935 TGACTGCAACCGGTGACATTGTTTTATCGATGGA-AGATGCAACT-AATCCGTTTTATGT 992
||||||| || ||||| ||| |||| |||| | | |||| || | || ||| |||||||
Sbjct 1645 TGACTGCTACTGGTGATATTATTTTGTCGAAG-ATAGATACATGTGAA-CCGATTTATGT 1702
Query 993 TTTCAACTTCAATCCGGATAGGAACACTCTCCAAGTCCAAAGTGTTGAAATCCAAGGTCT 1052
||| ||||||||| || ||||| ||| | ||||||||||||||||||||||| |
Sbjct 1703 TTTTTTCTTCAATCCCGAAAGGAAAACT-T-----TCCAAAGTGTTGAAATCCAAGGTTT 1756
Query 1053 TGGAGCTAATCGTGATCACATAGCTTGCCATGCCTTTGTTGACTATGTAGAAGATTTTAG 1112
|||||||||||||||| || || || || ||||||| ||||||||||| ||| ||||
Sbjct 1757 TGGAGCTAATCGTGATTGCAGAGTTTACC---CCTTTGTAGACTATGTAGATGATCTTAG 1813
Query 1113 TGTTAG-CGATGCAGTGCTGCAACTCAAGTCAAGCCC 1148
||| | ||||| || ||||||||||||||||
Sbjct 1814 C-TTAAACCATGCAAAGC---AACTCAAGTCAAGCCC 1846
> Ahg922215 jgi|Araly1|922215|scaffold_103496.1
Length=956
Score = 412 bits (223), Expect = 3e-114
Identities = 515/648 (79%), Gaps = 51/648 (8%)
Strand=Plus/Plus
Query 435 TTCGTATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTATTGTTCATGGA 494
||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |
Sbjct 186 TTCGTATAGCTATTTAGGGTTTGATCCAATAGACAAGGAATTCAAGGTATTGTTCATGAA 245
Query 495 TACTTGTGATTTTATAGCTTCGAAG-GATGA-AGATCATTATATTTTGACATTGGGAACT 552
|||| || | ||||||||||| || ||| | ||||||||||||||||||| | ||||||
Sbjct 246 TACTAGTAAATTTATAGCTTC-TAGTGAT-ATAGATCATTATATTTTGACACTAGGAACT 303
Query 553 -GGAGAATTGAAGTGGAGGAAGATCCAATGTCCTTTTACACATGAGCCTTTTTGGGAGAG 611
||| |||||| ||||||||||||||||||||||||||| ||| | ||||||||| | ||
Sbjct 304 GGGA-AATTGAGGTGGAGGAAGATCCAATGTCCTTTTACCCATAACCCTTTTTGGAATAG 362
Query 612 GATATGCATTAATGGGGTTTTGTATTACTCT-GCTTACTATTCTGATTCTAATGGAAGGT 670
||| ||||| ||||||||||||||||||| | || | | ||||||| || ||| ||
Sbjct 363 GATTTGCATCAATGGGGTTTTGTATTACT-TAGC-T-C-ATTCTGA----AA--GAAAGT 412
Query 671 CTCATCTC-ATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAATTTCATAGCCAC-AAA 728
| || | ||| ||||||||||||||| |||||||||||||| || | | || | |
Sbjct 413 ATTAT-GCGGTAGTTTGCTTTGATGTTAGATCTGAGAAATTCAAGCTCGTTG-AACTACA 470
Query 729 AC-ATCGG--TAC-GATC---A--G-TTGATAAACTATAAGGGGAAATTATGTGGGATTA 778
| | || | | | || | | ||||||||||||||||||||||||||||| |||
Sbjct 471 CCGTTTGGATTGCTG-TCTTTATGGACTGATAAACTATAAGGGGAAATTATGTGGGGTTA 529
Query 779 ATTTGGAGTATGCTAGGCATGTTGGTGGATTTCCTGTTAAGTTGA-GTATGTGGGTTTTA 837
||||| |||||||| | || |||||||||||| || |||| | ||||||||||| ||
Sbjct 530 ATTTGAAGTATGCTT--C-TGATGGTGGATTTCCCCTTGAGTT-ACGTATGTGGGTTCTA 585
Query 838 GAGGATGTCGAGAAACCGGAATGGTCGAAACATGTCTACTCTTTGTGG-ACGGAGAGTGA 896
||||||||||||||| ||||||| ||| | ||| |||| ||||| || | | ||| | |
Sbjct 586 GAGGATGTCGAGAAAGAGGAATGGACGACATATGCCTACACTTTGAGGGATG-AGAATAA 644
Query 897 AGTCGTTAAGGTTAACCGGAATCTTTCTGTTTCTGGGATGACTGCAACCGGTGACATTGT 956
| |||||||||||||| |||||||| ||| ||||| ||||||| | ||||| |||||
Sbjct 645 ACTCGTTAAGGTTAACTACAATCTTTCCGTTGCTGGGGTGACTGCTTCAGGTGAAATTGT 704
Query 957 TTTATCGATGGA--AGA-TGCAACTAATCCGTTTTATGTTTTCAACTTCAATCCGGATAG 1013
||| | |||| | | | || ||| ||||| ||||||||| |||| ||||| | ||
Sbjct 705 TTTG--G-TGGACCATAATACATGTAAACCGTTCTATGTTTTCTACTTTAATCCCAAAAG 761
Query 1014 GAACACTCTCCAAGTCCAAAGTGTTGAAATCCAAGGTCTTGGAGCTAA 1061
||||||||||||| | ||||||||||| || | ||||||||||
Sbjct 762 GAACACTCTCCAA----A--GTGTTGAAATCAAATTTTTTGGAGCTAA 803
> Ahg336209 jgi|Araly1|336209|fgenesh1_pg.C_scaffold_1002774
Length=645
Score = 405 bits (219), Expect = 5e-112
Identities = 294/329 (89%), Gaps = 9/329 (3%)
Strand=Plus/Plus
Query 345 CATCCCAAAGGAAGATGAGGATGCAAAGCGTGTGTTGTGTGACCCTCTCACTGGCCAGTA 404
|||||||||||||||||| |||| |||||||||||| |||||||||||||| || || ||
Sbjct 6 CATCCCAAAGGAAGATGAAGATGAAAAGCGTGTGTTATGTGACCCTCTCACAGGACAATA 65
Query 405 TGTGATCTTACCTGAACTTAGA-GT-AGGT-G-GTTCGTATAGCTATTTAGGGTTTGATC 460
||| |||||||||||||||||| || | | | ||||||||||||||||||||||||||
Sbjct 66 TGTTATCTTACCTGAACTTAGAGGTCA-CTCGTATTCGTATAGCTATTTAGGGTTTGATC 124
Query 461 CGATTGATAAGGAATTCAAGGTATTGTTCATGGATACTTGTGATTTTATAGCTTCGAAGG 520
|| ||||||||||||||||||| ||||||||| ||||| |||||||||| |||| ||
Sbjct 125 CGGTTGATAAGGAATTCAAGGTGTTGTTCATGAATACTAGTGATTTTATGGCTTATAATT 184
Query 521 ATGA-AGATCATTATATTTTGACATTGGGAACTGGAGAATTGAAGTGGAGGAAGATCCAA 579
|| | ||||||| ||||||||||| | ||| ||||||||||||| |||||||||||||||
Sbjct 185 AT-ACAGATCATCATATTTTGACACTAGGAGCTGGAGAATTGAAATGGAGGAAGATCCAA 243
Query 580 TGTCCTTTTACACATGAGCCTTTTTGGGAGAGGATATGCATTAATGGGGTTTTGTATTAC 639
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 244 TGTCCTTTTACACATGAGCCTTTTTGGGAAAGGATATGCATTAATGGGGTTTTGTATTAC 303
Query 640 TCTGCTTA-CTATTCTGATTCTAATGGAA 667
|| ||| | | ||||||||||||||||||
Sbjct 304 TCAGCTCAAC-ATTCTGATTCTAATGGAA 331
Score = 315 bits (170), Expect = 8e-85
Identities = 247/283 (87%), Gaps = 9/283 (3%)
Strand=Plus/Plus
Query 797 ATGTTGGTGGATTTCCTGTTAAGTTGA-GTATGTGGGTTTTAGAGGATGTCGAGAAACCG 855
||| |||||||||||| || |||| | ||||||||||| |||| |||||| | ||||||
Sbjct 368 ATGATGGTGGATTTCCCCTTGAGTT-ACGTATGTGGGTTCTAGAAGATGTCCATAAACCG 426
Query 856 GAATGGTCGAAACATGTCTACTCTTTG-TGGACGGAGAGTGAAGTCGTTAAGGTTAAC-C 913
|||||||||||| |||||||| ||||| ||| || | | ||||||||||||||||| |
Sbjct 427 GAATGGTCGAAATATGTCTACACTTTGAGGGA-TGATAATAAAGTCGTTAAGGTTAACTC 485
Query 914 GGAATCTTTCTGTTTCTGGGATGACTGCAACCGGTGACATTGTTTTATCGATGGAAG-AT 972
|||||||||||||||||||||||||| ||||||||||||||||| ||| | ||| ||
Sbjct 486 -TAATCTTTCTGTTTCTGGGATGACTGCTACCGGTGACATTGTTTTGTCG-TTCAAGTAT 543
Query 973 GCAACTAATCCGTTTTATGTTTTCAACTTCAATCCGGATAGGAACACTCTCCAAGTCCAA 1032
||| ||||||||| |||||||||| ||||||||| ||| |||||||||||||||||||||
Sbjct 544 GCATCTAATCCGTATTATGTTTTCTACTTCAATCTGGAAAGGAACACTCTCCAAGTCCAA 603
Query 1033 AGTGTTGAAATCCAAGGTCTTGGAGCTAATCGTGATCACATAG 1075
||||||||| |||||||||||| |||||||||||||| |||||
Sbjct 604 AGTGTTGAA-TCCAAGGTCTTGAAGCTAATCGTGATCGCATAG 645
> Ahg338947 jgi|Araly1|338947|fgenesh1_pg.C_scaffold_2001046
Length=1011
Score = 213 bits (115), Expect = 3e-54
Identities = 251/314 (80%), Gaps = 19/314 (6%)
Strand=Plus/Plus
Query 749 TAAACTATAAGGGGAAATTATGTGGGATTAATTTGGAGTATGCTAGGCATGTTGGTGGAT 808
||||||||||||| |||||| |||||||| ||| |||||||||| | ||| ||||||||
Sbjct 401 TAAACTATAAGGGCAAATTAGGTGGGATTTATTGGGAGTATGCT-G--ATGATGGTGGAT 457
Query 809 TTCCTGTTAAGTTGAG-TATGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCGAAA 867
||||| || |||| | |||||||||| |||||||| | |||||| ||||||||| ||
Sbjct 458 TTCCTCTTGAGTT-ATCTATGTGGGTTCTAGAGGATCTTGAGAAAAATGAATGGTCGGAA 516
Query 868 CATGTCTACTCTTTGT-GGACGGAGAGT-GAAGTCGTTAAGGTTAACCGGAATCTTTCTG 925
||| |||| ||||| || | || | | | ||||||||||||||| ||||||||||
Sbjct 517 TATGCCTACACTTTGAAGG-CTGATAATAGC-GTCGTTAAGGTTAACTACAATCTTTCTG 574
Query 926 TT-TCTGGGATGACTGCAACCGGTGACATTGTTTTATCGATGGAAG-ATGCAACTAATCC 983
|| | |||| ||||||| | ||||| |||||||| | | | | | ||||| ||| ||
Sbjct 575 TTGT-TGGGGTGACTGCTAGAGGTGAAATTGTTTTGGCCAAGCA-GTATGCATGTAAACC 632
Query 984 GTTTTATGTTTTCAACTTCAATCCGGATAGGAACACTCTCCAAGTCCAAAGTGTTGAAAT 1043
||||||||||||| |||| ||||| || ||||||||||||| | || ||||||||||
Sbjct 633 GTTTTATGTTTTCTACTTTAATCCCGAAAGGAACACTCTCC---T--AA-GTGTTGAAAT 686
Query 1044 CCAAGGTCTTGGAG 1057
||||||| ||||||
Sbjct 687 CCAAGGTGTTGGAG 700
> Ahg473482 jgi|Araly1|473482|fgenesh2_kg.1__3436__AT1G33020.1
Length=1521
Score = 211 bits (114), Expect = 1e-53
Identities = 620/849 (73%), Gaps = 96/849 (11%)
Strand=Plus/Plus
Query 70 AGGTGTCGTTGCGTTTCGAAGCGATGG-AGATCCATCCTTCGCC-ATCAAGTTTTCACCG 127
|||||||||||||| ||||||| |||| || ||||| ||| ||| ||| ||||||||
Sbjct 22 AGGTGTCGTTGCGTGTCGAAGCTATGGAAG-TCCATGCTTGGCCGCCCAA-ATTTCACCG 79
Query 128 AACTCT-TTC-TAACAAGATCCAAC-GCTCGTCCACGTCTCTTAATCGGTGTACAACA-A 183
| | | ||| |||| || ||| | | || ||||||||||||| | || || ||| | |
Sbjct 80 -AGT-TGTTCTTAACCAGGTCC-TCAGATCATCCACGTCTCTTATTTGGGGT-CAAAAGA 135
Query 184 GACGGTGAGTGGAGCT-TTC-TCTCAACGCCTCAGCCTCAGAATCGTCACGAG-AGTTCG 240
|| ||||||| | ||| ||| |||| |||||||| ||| ||| | | | || ||
Sbjct 136 GAGGGTGAGT-G-GCTCTTCTTCTCGTCGCCTCAGTGTCAAAATATTTTTGGGAAG-TCA 192
Query 241 TCTCTTGTAGTAGCTGCCGCCGATTTTCATACCAAGTTTTCTTC-AGGGAAAAGCAGACA 299
|||||| ||||| ||||||||||||||| ||||| || || || | ||||| |
Sbjct 193 TCTCTTTTAGTA---ACCGCCGATTTTCATATGAAGTTCTC-TCAAGACCTAGGCAGA-A 247
Query 300 TC-AGTGCACCTATGCCTCTGGTTTGATCTATTTTTAAAAAATGTTCATCCCAAAGGAAG 358
| | || | ||||| |||||||||||||| ||| | | | || | | || |
Sbjct 248 CCAATTGTAGCTATGTTTCTGGTTTGATCTA--TTT-CCCTA-G-T-AT-GC--A-GATG 297
Query 359 ATGAGGATGCAAAGCGTGTGTTGTGTGACCCTCTCACTGGCCAGTATGTGATCTTAC--C 416
|| | || | |||||| | ||| ||||| |||| || | |||| |||||||| |
Sbjct 298 -TGTGAATTC----CGTGTGATATGTAACCCTATCACGGGAAAATATGCGATCTTACAAC 352
Query 417 TG--AACTTAGAGTAGGTGGTTCGTATAGCTAT-TTAGGGTTTGATCCGATTGATAAGGA 473
| ||| || | | | ||| | | |||| | |||||||||||||||||||| ||| |
Sbjct 353 GGATAACGTACA--AAGAGGTGAG-A-AGCT-TCTTAGGGTTTGATCCGATTGACAAGCA 407
Query 474 ATTCAAGGTATTGTTCATGGATA-CTTGTGATTTTATAGCTTCGAA-GGATGAAGATCAT 531
||||||||||||| ||| | | | | || ||||| ||| |||| | | |||
Sbjct 408 ATTCAAGGTATTGCGCAT-TA-ACCAT-AAATATTATA----AGAATGGAT-ACGTTCAC 459
Query 532 TATATTTTGACATTGGGAACTGGAGAATTGAAGTGGAGGAAGATCCAATGTCCTTTTA-C 590
||||| ||||||| ||| ||||| || ||| ||||||||||||||| ||||| ||| |
Sbjct 460 CATATTCTGACATTAGGACCTGGAAAAATGAGGTGGAGGAAGATCCACTGTCC-CTTAGC 518
Query 591 ACATGAGCCTTTTTGGG-AGAGGATATGCATTAATGGGGTTTTGTATTACTCT-GCTTA- 647
|||| ||||||| ||| ||| |||||| | ||||||||||||||||||| | ||| |
Sbjct 519 CCATGTGCCTTTTCGGGAAGA-AATATGCGTCAATGGGGTTTTGTATTACT-TAGCTCAC 576
Query 648 CTATTCTGATTCTAATGGAAGGTC-TCATCTCATA-GCTTGCTTTGATGTTAGGTCTGAG 705
| | |||| || |||| | | | | || | ||| | ||||||||||||||||||||||
Sbjct 577 CCA-ACTGA-TC--ATGG-A-G-CGT-ATGTGATATG-TTGCTTTGATGTTAGGTCTGAG 627
Query 706 AAATTCAA-TTTCATAGCCACAAAA--CATC-G-G-TACGA-TCAGTTGATAAACTATAA 758
|||||||| ||| || | ||||| | | | | | | | | ||||||| || ||
Sbjct 628 AAATTCAAATTT-ATTGATACAAATTGCTTTTGTGGTTTGCCTGAATTGATAAGGTACAA 686
Query 759 GGGGAAATTATGTGGGATTAATTTGGA-GTATGCTAG-G-CATGTTGGT-GGATTT-CCT 813
||| |||||| ||| ||||| |||||| ||||| || | || || || || | | ||
Sbjct 687 GGGTAAATTAGGTGCGATTA-TTTGGAAGTATGATACCGTCA-GT-GGAAGG-TGTACC- 741
Query 814 GTTAAGTTGAGTATGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCGAAACATGTC 873
||| ||||| ||||||||||| |||||||||||||||||| ||||||||| ||| |||||
Sbjct 742 GTTGAGTTGTGTATGTGGGTTCTAGAGGATGTCGAGAAACAGGAATGGTCCAAATATGTC 801
Query 874 TACTCTTTG 882
|| |||||
Sbjct 802 CACCCTTTG 810
> Ahg922295 jgi|Araly1|922295|scaffold_103576.1
Length=930
Score = 152 bits (82), Expect = 7e-36
Identities = 277/365 (76%), Gaps = 38/365 (10%)
Strand=Plus/Plus
Query 530 ATT-ATATTTTGACATTGGGAACTGGAGAATTGAAGTGGAGGAAGATCCAATGTCCTTTT 588
||| ||||||||||||| | || |||| || ||| ||||||||||||| ||||| ||
Sbjct 199 ATTGATATTTTGACATTAGAAAGTGGAAAAATGAGGTGGAGGAAGATCTGTTGTCCCTTA 258
Query 589 ACACATGAGCCTTT-TTGGGAGA-GGATATGCATTAATGGGGTTTTGTATTACTCT-GCT 645
|| || ||| ||| || || | |||||||||| ||||| ||||||||||||| | | |
Sbjct 259 ACCCACGAG-GTTTGTTTTGA-ACGGATATGCATCAATGGAGTTTTGTATTACT-TAGGT 315
Query 646 TACTATTCTGATTCTAATGGAAGGTCTCATCTCATAGCTTGCTTTGATGTTAGGTCTGAG 705
||| | |||| | || | | |||| || | ||||||||||||||||||||| ||||
Sbjct 316 TACAAAACTGA-T-GAA--G-A-GTCTTATGTGGTAGCTTGCTTTGATGTTAGGTATGAG 369
Query 706 AAATTCAA-TTTCATAGCCACAAAA--CA-TCGG-TACGA-TC-AG-TTGATAAACTATA 757
||||||| ||| |||| ||||| || | || | || | || ||||| |||||||
Sbjct 370 GAATTCAAGTTT-ATAGATGCAAAATGCATTGGGCGA-GAGACTAGATTGATTAACTATA 427
Query 758 AGGGGAAATTATGTGGGATTAATTTGGAGTATGCTAGGCATGTTGGTGGATTTCCTGTTA 817
|||| |||||| |||||||| | |||| | | | | | || || | || | |
Sbjct 428 AGGGTAAATTAGGTGGGATTGA-TTGG-G--T-C-A---A---AGGAGG-TAACC-G-TG 472
Query 818 AGTTGAGTATGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCGAAACATGTCTACT 877
||||| |||||||||||||||||||||||||||||| |||||||||||| |||| |||
Sbjct 473 AGTTGTGTATGTGGGTTTTAGAGGATGTCGAGAAACAAGAATGGTCGAAATATGTTTACA 532
Query 878 CTTTG 882
|||||
Sbjct 533 CTTTG 537
> Ahg922217 jgi|Araly1|922217|scaffold_103498.1
Length=969
Score = 145 bits (78), Expect = 1e-33
Identities = 242/318 (76%), Gaps = 24/318 (8%)
Strand=Plus/Plus
Query 746 TGATAAACTATAAGGGGAAATTATG-TGGGATTAATTTGGAGTATGCTAGGCATGTTGGT 804
|||||||||||||||| ||||| || || ||||||||||| | | || ||| | ||
Sbjct 418 TGATAAACTATAAGGGTAAATT-TGGTGTTATTAATTTGGA--A-GATAATTATGCTCGT 473
Query 805 GGATTTCCTGTTAAGTTGAGTATGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCG 864
|||||||| |||||||| |||| |||||| |||| |||||||||||| |||||| ||
Sbjct 474 GGATTTCCCCTTAAGTTGCGTATATGGGTTCTAGACAATGTCGAGAAACAAGAATGGACG 533
Query 865 AAACATGTCTACTCTTTGTGGACGGAGAGTGA-AGTCGTTAAGGTTAACCGGAATCTTTC 923
| | ||| |||| ||||| || | |||| | | |||| |||| ||| | || |||
Sbjct 534 ACATATGCCTACACTTTGAGGGCTGAGAAT-ATAGTC---AAGGATAAAAGCTATATTTA 589
Query 924 TGTT-TCTGGGATGACTGCAACCGGTGACATTGTTTTATCGATGGAA-GA-TGCA-ACTA 979
|||| | |||| ||||||| | ||||| |||||||| | | || || |||| | ||
Sbjct 590 TGTTGT-TGGGGTGACTGCTTCAGGTGAAATTGTTTTGGCAAA--AATGAATGCATA-TA 645
Query 980 ATCCGTTTTATGTTTTCAACTTCAATCCGGATAGGAACACTCTCCAAGTCCAAAGTGTTG 1039
| |||||||||||||| |||| ||||| || | ||||||||||||| | ||||||
Sbjct 646 AACCGTTTTATGTTTTTTACTTTAATCCCGAAAAGAACACTCTCCAA----A--GTGTTG 699
Query 1040 AAATCCAAGGTCTTGGAG 1057
||||||||||| || |||
Sbjct 700 AAATCCAAGGTGTTAGAG 717
> Ahg922214 jgi|Araly1|922214|scaffold_103495.1
Length=969
Score = 145 bits (78), Expect = 1e-33
Identities = 242/318 (76%), Gaps = 24/318 (8%)
Strand=Plus/Plus
Query 746 TGATAAACTATAAGGGGAAATTATG-TGGGATTAATTTGGAGTATGCTAGGCATGTTGGT 804
|||||||||||||||| ||||| || || ||||||||||| | | || ||| | ||
Sbjct 418 TGATAAACTATAAGGGTAAATT-TGGTGTTATTAATTTGGA--A-GATAATTATGCTCGT 473
Query 805 GGATTTCCTGTTAAGTTGAGTATGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCG 864
|||||||| |||||||| |||| |||||| |||| |||||||||||| |||||| ||
Sbjct 474 GGATTTCCCCTTAAGTTGCGTATATGGGTTCTAGACAATGTCGAGAAACAAGAATGGACG 533
Query 865 AAACATGTCTACTCTTTGTGGACGGAGAGTGA-AGTCGTTAAGGTTAACCGGAATCTTTC 923
| | ||| |||| ||||| || | |||| | | |||| |||| ||| | || |||
Sbjct 534 ACATATGCCTACACTTTGAGGGCTGAGAAT-ATAGTC---AAGGATAAAAGCTATATTTA 589
Query 924 TGTT-TCTGGGATGACTGCAACCGGTGACATTGTTTTATCGATGGAA-GA-TGCA-ACTA 979
|||| | |||| ||||||| | ||||| |||||||| | | || || |||| | ||
Sbjct 590 TGTTGT-TGGGGTGACTGCTTCAGGTGAAATTGTTTTGGCAAA--AATGAATGCATA-TA 645
Query 980 ATCCGTTTTATGTTTTCAACTTCAATCCGGATAGGAACACTCTCCAAGTCCAAAGTGTTG 1039
| |||||||||||||| |||| ||||| || | ||||||||||||| | ||||||
Sbjct 646 AACCGTTTTATGTTTTTTACTTTAATCCCGAAAAGAACACTCTCCAA----A--GTGTTG 699
Query 1040 AAATCCAAGGTCTTGGAG 1057
||||||||||| || |||
Sbjct 700 AAATCCAAGGTGTTAGAG 717
> Ahg923021 jgi|Araly1|923021|scaffold_104302.1
Length=1220
Score = 80.5 bits (43), Expect = 3e-14
Identities = 331/459 (72%), Gaps = 63/459 (14%)
Strand=Plus/Plus
Query 437 CGTATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTATTGTTCATGGATA 496
|||||| || ||| ||||||||||||||||| ||| |||||||||| ||| |||||| |
Sbjct 481 CGTATACCTTTTTCGGGTTTGATCCGATTGACAAGCAATTCAAGGTTTTGCTCATGG--A 538
Query 497 CTTGT-GATTTTATAGCTTCGAAGGATGAAGATCATTATATTTTGACATTGGGAACTGGA 555
|| | |||| | ||| ||| ||||| | ||| ||||| | |||| |||
Sbjct 539 -TTATCCATTTGGT--CTT-----GAT---CATCATAAAATTCTGACAGTAGGAAAGGGA 587
Query 556 GA-ATTGAAG-TGGAGGAA-GATCCAATG-TCCTTTTACACATGAGCCT-TTTTG-GGAG 609
|| | || || |||| ||| ||| |||| ||| || | |||| || || || | |
Sbjct 588 GACA-TG-AGTTGGA-GAAGGATTAAATGTTCC-TTAAAACAT---TCTATTATGAGTAA 640
Query 610 A-GGATATGCATTAATGGGGTTTTGTATTACTCT-GCTTACTAT-TCTGATTCTAATGGA 666
| |||||||||||||||||||||||||||||| | | | | | |||| || || |
Sbjct 641 AGGGATATGCATTAATGGGGTTTTGTATTACT-TAGGTGAG-ACGTCTG---CTGAT--A 693
Query 667 AGGTCTCATCTCATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAA-TTTCAT--AGCC 723
| || | ||||||| ||| |||||| |||| |||||||||||||| ||| || | ||
Sbjct 694 A--TC-CG-CTCATAGTTTGTTTTGATATTAGCTCTGAGAAATTCAAATTT-ATTCA-CC 747
Query 724 ACAAAA-CATCGGTACGATCAGTTGATAAACTATAAGGGGAAATTATGTGGGATTAATT- 781
||| | || | | ||| ||||||||||| ||||| |||||| ||| |||| ||
Sbjct 748 GGGAAAGC-TCT-T--G-TCAATTGATAAACTACAAGGGTAAATTAGGTGTGATTTATCG 802
Query 782 TGGAGTATGCTAGGCATGTTGGTGGATTTCCTGTTAAGTTGAGTATGTGGGTTTTAGAGG 841
|| | ||| | | | | || || || || ||||| || ||||| || ||||||
Sbjct 803 TG-ATTATT-TCG-C-TAATGATG-----CCA-TTGAGTTGCGTGTGTGGATTCTAGAGG 852
Query 842 ATGTCGAGAAACCGGAATGGTCGAAACATGTCTACTCTT 880
|||||||||||| |||||||| ||| ||| ||||||||
Sbjct 853 ATGTCGAGAAACATGAATGGTCTAAATATGCCTACTCTT 891
> Ahg931305 jgi|Araly1|931305|scaffold_303762.1
Length=1104
Score = 65.8 bits (35), Expect = 9e-10
Identities = 91/116 (78%), Gaps = 11/116 (9%)
Strand=Plus/Plus
Query 679 ATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAA-TTTCATAGCCACAAAACATCGGTA 737
|||| ||||||||||||||||||||||||||||| ||| || | | | || | |||
Sbjct 527 ATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACCTTT-ATTGACGTAGAA-A--GGTT 582
Query 738 C-GATC-AGTTGATAAACTATAAGGGGAAATTATG-TGGGATTAATTTGGAGTATG 790
| || | ||||||||||||||||| |||||| | || |||| ||| |||| |||
Sbjct 583 TTG-TCGA-TTGATAAACTATAAGGGAAAATTA-GCTGTGATTTATTGGGAGGATG 635
> Ahg931791 jgi|Araly1|931791|scaffold_304248.1
Length=1112
Score = 60.2 bits (32), Expect = 4e-08
Identities = 90/116 (78%), Gaps = 11/116 (9%)
Strand=Plus/Plus
Query 679 ATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAA-TTTCATAGCCACAAAACATCGGTA 737
|||| ||||||||||||||||||||||||||||| ||| || | | | || | |||
Sbjct 553 ATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACCTTT-ATTGACGTAGAA-A--GGTT 608
Query 738 C-GATC-AGTTGATAAACTATAAGGGGAAATTATG-TGGGATTAATTTGGAGTATG 790
| || | ||||| ||||||||||| |||||| | || |||| ||| |||| |||
Sbjct 609 TTG-TCGA-TTGATCAACTATAAGGGAAAATTA-GCTGTGATTTATTGGGAGGATG 661
> Ahg936065 jgi|Araly1|936065|scaffold_500256.1
Length=1293
Score = 58.4 bits (31), Expect = 2e-07
Identities = 33/34 (97%), Gaps = 0/34 (0%)
Strand=Plus/Plus
Query 679 ATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCA 712
|||| |||||||||||||||||||||||||||||
Sbjct 641 ATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 674
> Ahg346783 jgi|Araly1|346783|fgenesh1_pg.C_scaffold_5000175
Length=1287
Score = 54.7 bits (29), Expect = 2e-06
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Plus
Query 684 TTGCTTTGATGTTAGGTCTGAGAAATTCA 712
|||||||||||||||||||||||||||||
Sbjct 678 TTGCTTTGATGTTAGGTCTGAGAAATTCA 706
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58239984605
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5