BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G30945.1
Length=447
Score E
Sequences producing significant alignments: (Bits) Value
Ahg922186 jgi|Araly1|922186|scaffold_103467.1 429 8e-120
Ahg922188 jgi|Araly1|922188|scaffold_103469.1 215 2e-55
Ahg922218 jgi|Araly1|922218|scaffold_103499.1 191 4e-48
Ahg932493 jgi|Araly1|932493|scaffold_400481.1 185 2e-46
Ahg932494 jgi|Araly1|932494|scaffold_400482.1 172 1e-42
Ahg922215 jgi|Araly1|922215|scaffold_103496.1 169 2e-41
Ahg922294 jgi|Araly1|922294|scaffold_103575.1 158 4e-38
Ahg473482 jgi|Araly1|473482|fgenesh2_kg.1__3436__AT1G33020.1 158 4e-38
Ahg336232 jgi|Araly1|336232|fgenesh1_pg.C_scaffold_1002797 145 3e-34
Ahg336203 jgi|Araly1|336203|fgenesh1_pg.C_scaffold_1002768 141 4e-33
Ahg922217 jgi|Araly1|922217|scaffold_103498.1 139 2e-32
Ahg922214 jgi|Araly1|922214|scaffold_103495.1 139 2e-32
Ahg336206 jgi|Araly1|336206|fgenesh1_pg.C_scaffold_1002771 128 3e-29
Ahg922192 jgi|Araly1|922192|scaffold_103473.1 115 3e-25
Ahg922179 jgi|Araly1|922179|scaffold_103460.1 111 3e-24
Ahg922296 jgi|Araly1|922296|scaffold_103577.1 110 1e-23
Ahg938652 jgi|Araly1|938652|scaffold_502843.1 93.5 1e-18
Ahg923024 jgi|Araly1|923024|scaffold_104305.1 87.9 6e-17
Ahg343873 jgi|Araly1|343873|fgenesh1_pg.C_scaffold_4000215 73.1 2e-12
Ahg936065 jgi|Araly1|936065|scaffold_500256.1 71.3 6e-12
Ahg346781 jgi|Araly1|346781|fgenesh1_pg.C_scaffold_5000173 69.4 2e-11
Ahg936741 jgi|Araly1|936741|scaffold_500932.1 65.8 3e-10
Ahg936067 jgi|Araly1|936067|scaffold_500258.1 63.9 9e-10
Ahg336227 jgi|Araly1|336227|fgenesh1_pg.C_scaffold_1002792 63.9 9e-10
Ahg359033 jgi|Araly1|359033|fgenesh1_pg.C_scaffold_9000073 58.4 4e-08
Ahg495332 jgi|Araly1|495332|fgenesh2_kg.8__1148__AT5G52620.1 54.7 6e-07
> Ahg922186 jgi|Araly1|922186|scaffold_103467.1
Length=849
Score = 429 bits (232), Expect = 8e-120
Identities = 371/436 (85%), Gaps = 17/436 (4%)
Strand=Plus/Plus
Query 1 ATGAACCTTTTTGGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCTAGTTCA 60
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 338 ATGAACCTTTTGGGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTG-CTAGGACA 396
Query 61 GCTCATGGATATCTTCTGATAGTTTCTTTTGATTTTAGGTCTGAGAAATTCAATTTTATC 120
| ||||| | ||||||||||||||| ||||||| | |||||||||||||||||||||||
Sbjct 397 GATCATGCAAATCTTCTGATAGTTTGTTTTGATGTGAGGTCTGAGAAATTCAATTTTATT 456
Query 121 AATGCATCA-AGCTTCCTTTTTT-CATCTACAAAATTGATAAACTACAAAGGTAAATTAG 178
|||||||| | |||| |||| | ||| |||||||||||||||||| |||||||||||||
Sbjct 457 GATGCATCATA-CTTC-TTTTATACATATACAAAATTGATAAACTATAAAGGTAAATTAG 514
Query 179 GTGGGATTGATTTGGCGTATAATCATGGTGGTGTATATCCCGTTGAGTTACGTATGTGGG 238
||| || | || ||| |||| |||||| ||| | || ||||||| || | ||||
Sbjct 515 GTGTGACTAATCTGGAGTAT------GGTGGTTTATTTTCCATTGAGTTGTGTGTTTGGG 568
Query 239 TTCTAGAGGATGTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCGGAGACCA 298
|||||||||||||| ||||||| |||||||||| |||||| |||||||| |||||||
Sbjct 569 TTCTAGAGGATGTCAAGAAACATGAATGGTCGAAACATGTCTACTCTTTAACGGAGACGG 628
Query 299 TTGAATTTCAGCAGTGTAACTACAATATTTGCGTTGGTGGGATGAATGCTATAGGTGAAA 358
||| || ||||||| |||||||||||||||||| |||||||| ||||| ||||||||
Sbjct 629 TTGTCTT---GCAGTGTGACTACAATATTTGCGTTGCTGGGATGACTGCTACAGGTGAAA 685
Query 359 TTGTTTTTTCGGAGT-CATATATATCTACATCCAAACCGTTTTATGTTTTCTACTTCAAT 417
||||||| || ||| || ||| ||||||||| |||||||||||||||||||||||||||
Sbjct 686 TTGTTTTGTCCCAGTACA-ATACATCTACATCGAAACCGTTTTATGTTTTCTACTTCAAT 744
Query 418 CCCGAAAAGAAAAACA 433
||||| | |||| |||
Sbjct 745 CCCGATA-GAAACACA 759
> Ahg922188 jgi|Araly1|922188|scaffold_103469.1
Length=256
Score = 215 bits (116), Expect = 2e-55
Identities = 191/226 (85%), Gaps = 9/226 (4%)
Strand=Plus/Plus
Query 225 GTTACGTATGTGGGTTCTAGAGGATGTCGAGAAACACGAATGGTC-GAGACATGTTTACT 283
||| ||| | || ||||||||| ||||||||||||| ||||||| || |||||| ||||
Sbjct 1 GTTGCGTGTTTGAGTTCTAGAGAATGTCGAGAAACATAAATGGTCAGAAACATGTCTACT 60
Query 284 CTTTGCCGGAGACCATTGAAT-TTCAGCAGTGTAACTACAATATTTGCGTTGGTGGGATG 342
||||||||||||| |||| | || ||||||| |||||||||||||||||| ||| |||
Sbjct 61 CTTTGCCGGAGACGATTG--TCTT--GCAGTGTCACTACAATATTTGCGTTGTTGGCATG 116
Query 343 AATGCTATAGGTGAAATTGTTTTTTCGGAGT-CATATATATCTACATCCAAACCGTTTTA 401
| ||||| | ||||||||||||| || |||| || ||| ||||| ||| |||||||||||
Sbjct 117 ACTGCTACAAGTGAAATTGTTTTGTCAGAGTACA-ATACATCTATATCAAAACCGTTTTA 175
Query 402 TGTTTTCTACTTCAATCCCGAAAAGAAAAACACTTTAAGGTGTTAA 447
||||||||||||||||||||||| |||| ||| | || |||||||
Sbjct 176 TGTTTTCTACTTCAATCCCGAAA-GAAACACAATCCAAAGTGTTAA 220
> Ahg922218 jgi|Araly1|922218|scaffold_103499.1
Length=959
Score = 191 bits (103), Expect = 4e-48
Identities = 346/456 (76%), Gaps = 45/456 (10%)
Strand=Plus/Plus
Query 1 ATGAACCTTT-TTGGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCT-AGTT 58
|||| ||||| | |||||| ||||||||||||||||||||||||||||| | ||| | ||
Sbjct 344 ATGAGCCTTTGTGGGAAAG-GATATGCATCAATGGGGTTTTGTATTACT-TAGCTCA-TT 400
Query 59 CAGCTCATGGATA-TCTTCT--GATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAAT 114
|| | || | | || | | |||||| | |||||| |||| ||||||||||||||
Sbjct 401 ---CTGAAAGAAAGTATTATGCGTTAGTTTGC-TTTGATGTTAGATCTGAGAAATTCAA- 455
Query 115 TTTATCAATGCATCAAG-CT-TCCTTT---TT-TCATCTACA-AAATTGATAAACTACAA 167
||| || || || | || ||| || | ||| | || |||||||||| ||
Sbjct 456 --GCTCATTGAAT-TAGAATATCGTTTGGATTGCCGTCTTTATGAACTGATAAACTATAA 512
Query 168 AGGTAAATTAGGTGGGATTGATTTGGCGTATAATCATGGTGGTGTATATCCCGTTGAGTT 227
||||||||| ||||| || ||||| |||| | ||||||||| || |||| |||||||
Sbjct 513 GGGTAAATTATGTGGGGTTAATTTGAAGTATGCTTATGGTGGTGGATTTCCCCTTGAGTT 572
Query 228 ACGTATGTGGGTTCTAGAGGATGTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTT 287
||||||||||||||||||||||||||||||| | |||||| || | ||| ||| ||||
Sbjct 573 ACGTATGTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGTCATATGCCTACACTTT 632
Query 288 GCCGGA-GACCATTGAA-T-TTCAGCAGTGT-AACTACAATATTTGCGTTGGTGGGATGA 343
| ||| || || || | || | || || ||||||||| ||| ||||| |||| |||
Sbjct 633 GAGGGATGAGAATA-AAGTCTTTA--AG-GTTAACTACAATCTTTCCGTTGTTGGGGTGA 688
Query 344 ATGCTAT-AGGTGAAATTGTTTTT-TCGGAGTCATATATATCTACATCCAAACCGTTTTA 401
|||| | ||||||||||||||| | | | |||| ||| | | || |||||||| ||
Sbjct 689 CTGCT-TCAGGTGAAATTGTTTTGGT-GAAC-CATA-ATA-C-A--TCTAAACCGTTATA 740
Query 402 TGTTTTCTACTTCAATCCCGAAAAGAAAAACACTTT 437
|||||||||||| |||||| ||||| || ||||||
Sbjct 741 TGTTTTCTACTTTAATCCC-AAAAGGAA--CACTTT 773
> Ahg932493 jgi|Araly1|932493|scaffold_400481.1
Length=1181
Score = 185 bits (100), Expect = 2e-46
Identities = 289/375 (77%), Gaps = 33/375 (9%)
Strand=Plus/Plus
Query 78 GATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAAT-TTTATCA-ATGCATCAA-GCT 133
|||||||| | |||||| | ||||||||||| ||| || ||||| | ||||| || ||
Sbjct 417 GATAGTTTGC-TTTGATGTCAGGTCTGAGAAGTTC-ATGTTTAT-AGATGCA-AAACACT 472
Query 134 TCCTTTTTTCA-T-C-TACAAAATTGATAAACTACAAAGGTAAATTAGGTGGGATTGA-T 189
| | ||||| | | |||| ||||||||||||| || |||||||||||||||||| | |
Sbjct 473 TTGGTGTTTCATTACATACACAATTGATAAACTATAAGGGTAAATTAGGTGGGATT-AGT 531
Query 190 TTGGCGTATAATCATGGTGGTGTATATCCCGTTGAGTTACGTATGTGGGTTCTAGAGGAT 249
|| |||| | || ||||| || |||| |||||||| ||||||||||||||||||||
Sbjct 532 TTAAAGTATGCTTGTGATGGTGGATTTCCCCTTGAGTTATGTATGTGGGTTCTAGAGGAT 591
Query 250 GTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCGGA-GACCATTGAATTTCA 308
|||||||||| |||||| || | |||| ||| |||||| || || || ||| | |
Sbjct 592 GTCGAGAAACGTAAATGGTTGAAATATGTCTACACTTTGCAGGCTGATAAT--AATCT-A 648
Query 309 GC-A-GTGT-AACTACAATATTTGCGTTGGTGGGATGAATGCTATAGGTGAAATTGTTTT 365
| | | || || ||||| ||| |||| ||||| || ||||| |||||||||||||||
Sbjct 649 GTTAAG-GTTAAAAACAATCTTTTTGTTGTTGGGACGACTGCTACAGGTGAAATTGTTTT 707
Query 366 TTCGGAG--TCA---TA-TAT-ATC-TA--CA-TCC-AAACCGTTTTATGTTTTCTACTT 413
||| || | | || ||| ||| || || | |||||||||||||||||||||||
Sbjct 708 GTCGAAGGATAAAGGTAGTATCATCATAAACACTATTAAACCGTTTTATGTTTTCTACTT 767
Query 414 CAATCCCGAAAAGAA 428
|||||| ||||||||
Sbjct 768 CAATCCTGAAAAGAA 782
> Ahg932494 jgi|Araly1|932494|scaffold_400482.1
Length=982
Score = 172 bits (93), Expect = 1e-42
Identities = 339/449 (76%), Gaps = 52/449 (12%)
Strand=Plus/Plus
Query 14 GAAAGAGATATGCATCAATGGGGTT-TTGTATTACTCTGGCTAGTTCAGCTCATGGA--T 70
||| ||| ||||| ||||||||||| || | ||||| | |||| |||| || ||
Sbjct 219 GAAGGAG-TATGCTTCAATGGGGTTGTT-TTTTACT-TAGCTAAAAAAGCTGAT-GACGG 274
Query 71 ATC-T-TCTGATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAAT-TTTATCA-ATGC 125
|| | | ||||||||| | |||||| ||||||||||||||||| || ||||| | | ||
Sbjct 275 GTCTTATGTGATAGTTTGC-TTTGATATTAGGTCTGAGAAATTC-ATGTTTAT-AGAAGC 331
Query 126 ATCAAGCTTCCTTTT-T--T-CATC---TACAAAATTGATAAACTACAAAGGTAAATTAG 178
| || | ||||| | | |||| | || | |||||||||||||| ||||||||||
Sbjct 332 A--AAAC--ACTTTTGTGATACATCAAATGCACATTTGATAAACTACAAGGGTAAATTAG 387
Query 179 GTGGGATTGA-TTTGGCGTATAATCATGGTGGTGTATATCCCGTTGAGTTA-CGTATGTG 236
|||||||| | ||| |||| | || ||||| || |||| |||||||| | ||||||
Sbjct 388 GTGGGATT-AGTTTAAAGTATGCTTGTGATGGTGGATTTCCCCTTGAGTTATC-TATGTG 445
Query 237 GGTTCTAGAGGATGTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCGG-AGA 295
||||||||||||||| |||||||| |||||||| | | | || ||| |||||| || ||
Sbjct 446 GGTTCTAGAGGATGTTGAGAAACATGAATGGTCTAAATACGTCTACACTTTGCGGGCTGA 505
Query 296 CCATTGAA-T--TTCAGCAGTGTAACTACAATATTTGC-GTTGGTGGGATGAATGCTATA 351
| | || | || || || ||| | ||| ||| | |||| ||||| || ||||| |
Sbjct 506 -GAATAAAGTCGTTAAG--GT-TAAGAATAATCTTT-CTGTTGTTGGGACGACTGCTAGA 560
Query 352 GGTGAAATTGTTTTTTCG--GAGT--CA-T-ATAT-ATC-T--ACA-T-CCAAACCGTTT 399
|||||||||||||| ||| || | | | |||| ||| | ||| | |||||||||
Sbjct 561 GGTGAAATTGTTTTGTCGAAGAATAAAAGTAATATCATCATAGACACTATTAAACCGTTT 620
Query 400 TATGTTTTCTACTTCAATCCCGAAAAGAA 428
|||||||||||||||||||||||||||||
Sbjct 621 TATGTTTTCTACTTCAATCCCGAAAAGAA 649
> Ahg922215 jgi|Araly1|922215|scaffold_103496.1
Length=956
Score = 169 bits (91), Expect = 2e-41
Identities = 343/458 (75%), Gaps = 44/458 (10%)
Strand=Plus/Plus
Query 6 CCTTTTTGGAA-AGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCT-AGTTCAGCT 63
||||||||||| || ||| ||||||||||||||||||||||||| | ||| | || ||
Sbjct 349 CCTTTTTGGAATAG-GATTTGCATCAATGGGGTTTTGTATTACT-TAGCTCA-TT---CT 402
Query 64 CATGGATA-TCTTCT--GATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAA--TTTT 117
| || | | || | | |||||| | |||||| |||| |||||||||||||| | |
Sbjct 403 GAAAGAAAGTATTATGCGGTAGTTTGC-TTTGATGTTAGATCTGAGAAATTCAAGCTCGT 461
Query 118 ATCAA-TGCATCAAGCTT-CCTT-TTTTCATCTACAAAATTGATAAACTACAAAGGTAAA 174
| || | || | | || || | || | || | |||||||||| || || |||
Sbjct 462 -TGAACTACA-C-CGTTTGGATTGCTGTC-TTTA-TGGACTGATAAACTATAAGGGGAAA 516
Query 175 TTAGGTGGGATTGATTTGGCGTAT-AATCATGGTGGTGTATATCCCGTTGAGTTACGTAT 233
||| ||||| || ||||| |||| || || ||||| || |||| |||||||||||||
Sbjct 517 TTATGTGGGGTTAATTTGAAGTATGCTTC-TGATGGTGGATTTCCCCTTGAGTTACGTAT 575
Query 234 GTGGGTTCTAGAGGATGTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCGGA 293
||||||||||||||||||||||||| | |||||| ||| | ||| ||| ||||| |||
Sbjct 576 GTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGACATATGCCTACACTTTGAGGGA 635
Query 294 -GACCATTGAA-T--TTCAGCAGTGTAACTACAATATTTGCGTTGGTGGGATGAATGCTA 349
|| || || | || || || |||||||||| ||| ||||| |||| ||| ||||
Sbjct 636 TGAGAATA-AACTCGTTAAG--GT-TAACTACAATCTTTCCGTTGCTGGGGTGACTGCT- 690
Query 350 T-AGGTGAAATTGTTTTT-TCGGAGTCATATATATCTACATCCAAACCGTTTTATGTTTT 407
| ||||||||||||||| | ||| |||| ||| | | | |||||||| ||||||||
Sbjct 691 TCAGGTGAAATTGTTTTGGT-GGAC-CATA-ATA-C-ATGT--AAACCGTTCTATGTTTT 743
Query 408 CTACTTCAATCCCGAAAAGAAAAACACTTTAAGGTGTT 445
|||||| |||||| ||||| || || || || |||||
Sbjct 744 CTACTTTAATCCC-AAAAGGAACACTCTCCAAAGTGTT 780
> Ahg922294 jgi|Araly1|922294|scaffold_103575.1
Length=938
Score = 158 bits (85), Expect = 4e-38
Identities = 278/363 (77%), Gaps = 46/363 (13%)
Strand=Plus/Plus
Query 77 TGATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAATTTTATCA-ATGCATCAAGCTT 134
||||||||| | |||||| || |||||||||||||||| ||||| | ||||| || |
Sbjct 356 TGATAGTTTGC-TTTGATGTTGGGTCTGAGAAATTCAAGTTTAT-AGATGCA--AA--AT 409
Query 135 CCTTTTTTC-ATCTACAAAATTGATAAACTACAAAGGTAAATTAGGTGGGATTGATTTGG 193
| || | | ||| | |||||| ||||| || |||||||||||||||||||| ||||
Sbjct 410 GCATTGGGCGAGATACTACATTGATTAACTATAAGGGTAAATTAGGTGGGATTGA-TTGG 468
Query 194 CGTATAATCATGGTGGTGTATATCCCGTTGAGTTACGTATGTGGGTTCTAGAGGATGTCG 253
|| | || | | || ||| | ||| ||||||| ||||||||||||||||||||||||
Sbjct 469 -GT-TGAT-A--G-GG-GTA-A--CCG-TGAGTTATGTATGTGGGTTCTAGAGGATGTCG 517
Query 254 AGAAACACGAA-TGGTCGAGACATGTTTACTCTTTGCCGGAGACCATTGAATTTC-AGCA 311
||||||| ||| ||||||| | |||||||| ||||||||||| || ||| | | | |
Sbjct 518 AGAAACA-GAAATGGTCGAAATATGTTTACACTTTGCCGGAGG--AT-GAAGTCCTA--A 571
Query 312 GTGTAACTA--CAAT-ATT-TGCGTTGGTGG-GATGA-ATGCTATAGGTGAAATTGTTTT 365
|| || || |||| ||| || ||| ||| | ||| | |||| ||||||| |||||||
Sbjct 572 TTG-AATTAGACAATTATTATG--TTGTTGGAG-TGACA-GCTAGAGGTGAAGTTGTTTT 626
Query 366 TTCGGAGTCATATATATCTACATCCAAACCGTTTTATGTTTTCTACTTCAATCCCGAAAA 425
||| || | | || | || | || |||||||||||||| | ||||||||||||||
Sbjct 627 GTCG-AGGAA-ACGTA-C-ACGTG-AA-CCGTTTTATGTTTTTTTCTTCAATCCCGAAAG 680
Query 426 GAA 428
|||
Sbjct 681 GAA 683
> Ahg473482 jgi|Araly1|473482|fgenesh2_kg.1__3436__AT1G33020.1
Length=1521
Score = 158 bits (85), Expect = 4e-38
Identities = 339/449 (76%), Gaps = 67/449 (15%)
Strand=Plus/Plus
Query 6 CCTTTTTGGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCT-AGTTC-A--G 61
|||||| || |||| |||||| ||||||||||||||||||||| | ||| | | | |
Sbjct 526 CCTTTTCGGGAAGAAATATGCGTCAATGGGGTTTTGTATTACT-TAGCTCA-CCCAACTG 583
Query 62 CTCATGGATATC-T-TCTGATA-GTTTCTTTTGATTTTAGGTCTGAGAAATTCAATTTTA 118
|||||| | | | | ||||| ||| | |||||| ||||||||||||||||||| ||||
Sbjct 584 ATCATGG--AGCGTATGTGATATGTTGC-TTTGATGTTAGGTCTGAGAAATTCAAATTTA 640
Query 119 TCAATGCAT-CAAGCTTCCTTTTTTCATCT-ACAAAATTGATAAACTACAAAGGTAAATT 176
| || || ||| || ||||| | | | | ||||||||| ||||| ||||||||
Sbjct 641 T---TG-ATACAA-ATTGCTTTTGTGGTTTGCCTGAATTGATAAGGTACAAGGGTAAATT 695
Query 177 AGGTGGGATTGATTTGG-CGTAT-A-A---TCA-TGG-TGGTGTATATCCCGTTGAGTTA 228
||||| |||| |||||| |||| | | ||| ||| |||| || ||||||||||
Sbjct 696 AGGTGCGATT-ATTTGGAAGTATGATACCGTCAGTGGAAGGTG--TA--CCGTTGAGTTG 750
Query 229 CGTATGTGGGTTCTAGAGGATGTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTTG 288
||||||||||||||||||||||||||||||| |||||||| | | |||| || |||||
Sbjct 751 TGTATGTGGGTTCTAGAGGATGTCGAGAAACAGGAATGGTCCAAATATGTCCACCCTTTG 810
Query 289 CCGGAGACCATTGAATTTCAGCAGTGTAACTACAATATTTGCGTTGGTGG-GATGA-ATG 346
||||||| ||| | | | | |||| |||| ||||| ||| | ||| | |
Sbjct 811 CCGGAGA--ATT------C--C--T--A-CTAC--TATTC-CGTTGCTGGAG-TGACA-G 850
Query 347 CTATAGGTGAAATTGTTTTTTCGGAGTCATATATA-TCTA-CATCCAAACCGTTTTATGT 404
||| |||||| ||||||||| | ||| | | | | || |||| ||||||||||||||
Sbjct 851 CTAAAGGTGATATTGTTTTT--G---TCA-AGA-AGT-TAACATCTAAACCGTTTTATGT 902
Query 405 TTTCTAC-TTCAATCCCGAAAAGAAAAAC 432
||||||| || |||||||||| |||||||
Sbjct 903 TTTCTACGTT-AATCCCGAAA-GAAAAAC 929
> Ahg336232 jgi|Araly1|336232|fgenesh1_pg.C_scaffold_1002797
Length=888
Score = 145 bits (78), Expect = 3e-34
Identities = 270/357 (76%), Gaps = 35/357 (10%)
Strand=Plus/Plus
Query 88 TTTGATTTTAGGTCTGAGAAATTCAA--TTTTATCAATGC--ATCAAGCTT-CCTTT-T- 140
|||||| |||||||||||||||| || |||||| |||| | | || || | ||| |
Sbjct 406 TTTGATGTTAGGTCTGAGAAATTTAAGTTTTTAT--ATGCAAACCCAGATTACTTTTATA 463
Query 141 -TTCATCTACAAAATTGATAAACTACAAAGGTAAATTAGGTGGGATTGATTTGGCGTATA 199
|| |||| ||||||| ||||||| || ||||||||||||| || | | ||| ||
Sbjct 464 ATTGGTCTAGAAAATTGTTAAACTATAAGGGTAAATTAGGTGTGACTAAAATGGAAAATG 523
Query 200 ATCATGGTGGTGTATATCCCGTTGAGTTACGTATGTGGGTTCTAGAGGATGTCGAGAAAC 259
|| ||| |||| || |||| || |||| ||||||||||||||||||||||||||||||
Sbjct 524 ATTATGAAGGTGGATTTCCCCTTAAGTTGCGTATGTGGGTTCTAGAGGATGTCGAGAAAG 583
Query 260 ACGAATGGTCGAGACATGTT--TACTCTTTGCCGGAGACC-ATTGAATTTCAGCA-GTG- 314
| |||||| ||| ||| || ||| || || || | | | |||||| | || | |
Sbjct 584 AGGAATGGACGA--CATATTCCTACACTGTGA-GG-G-CTGA--GAATTTAATCAAG-GA 635
Query 315 TAACT-ACAATATTTGCGTTGGTGGGATGAATGCTAT-AGGTGAAATTGTTTTTTCGGAG 372
||| | || ||||||| |||| |||| || |||| | ||||||||||||||| || ||
Sbjct 636 TAA-TGACTATATTTGTGTTGTTGGGGCGACTGCT-TCAGGTGAAATTGTTTTGGCGAAG 693
Query 373 TCATATATATC-TACATCCAAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 428
| | || | || | ||||||||||||||||||||||| ||||||||||||||
Sbjct 694 TTG-A-ATG-CGTA--T--AAACCGTTTTATGTTTTCTACTTTAATCCCGAAAAGAA 743
> Ahg336203 jgi|Araly1|336203|fgenesh1_pg.C_scaffold_1002768
Length=963
Score = 141 bits (76), Expect = 4e-33
Identities = 320/432 (74%), Gaps = 40/432 (9%)
Strand=Plus/Plus
Query 13 GGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCTAGTTCAGC-TCATG--GA 69
||||| ||||||||||||||||||||||||||||| | ||| | | | | ||| ||
Sbjct 402 GGAAA-AGATATGCATCAATGGGGTTTTGTATTACA-TAGCTTCTG-ACCCTGATGAAGA 458
Query 70 T-ATCTTCTGATAGTTT-CTTTTGATTTTAGGTCTG-AGAAATTCAA-TTTT-ATCAATG 124
|| ||||| || |||| ||| |||||| || |||||||||| |||| || | ||
Sbjct 459 GGATGAAAAGATAGGTTGCTTT-GATGTTAGGT-TGGAGAAATTCAAGTTTTTAT-A-TG 514
Query 125 CATCAAGCT-TCCTTTTTTCATCTACAAAATTGATAAACTACAAAGGTAAATTAGGTGGG 183
||| | || | | | ||| ||| | ||||||||| || |||||||||||| |
Sbjct 515 TATCTCCCAATC-TGATAA-A-CTATAAACT-GATAAACTATAAGGGTAAATTAGGTTTG 570
Query 184 ATTGATTTGG-CGTATAATCATGGTGGTGTATATCCCGTTGAGTTACGTATGTGGGTTCT 242
||| |||| | | ||| | | | ||||| || |||| |||||||||||||| |||||||
Sbjct 571 ATTAATTTAGAC-TATGCTTACGATGGTGGATTTCCCCTTGAGTTACGTATGCGGGTTCT 629
Query 243 AGAGGATGTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCGGA-GACCATTG 301
|||||||||||||||||| |||||| | | | |||| ||| ||||| || || ||
Sbjct 630 AGAGGATGTCGAGAAACAGGAATGGACTACATATGTCTACACTTTGATGGCTGAGAATA- 688
Query 302 AATTTCAG-CAGTG-T-AACTACAATATTTGCGTTGGTGGGATGAA-TGCTAT-AGGTGA 356
|| | | || || | ||| ||||| ||| ||||| |||| || |||| | ||||||
Sbjct 689 AAGC-C-GTCA-TGGTTAACAACAATCTTTCCGTTGTTGGGGC-AACTGCT-TCAGGTGA 743
Query 357 AATTGTTTTTTCGGAGTCATATATATCTACATCCAAACCGTTTTATGTTTTCTACTTCAA 416
||||||||| || || ||| || | | || ||||| ||||||||||||||||| ||
Sbjct 744 AATTGTTTTGGCGAAGG-ATA-ATG-C-ATAT--AAACCTTTTTATGTTTTCTACTTTAA 797
Query 417 TCCCGAAAAGAA 428
||||||| |||
Sbjct 798 CCCCGAAAGGAA 809
> Ahg922217 jgi|Araly1|922217|scaffold_103498.1
Length=969
Score = 139 bits (75), Expect = 2e-32
Identities = 277/368 (75%), Gaps = 39/368 (11%)
Strand=Plus/Plus
Query 79 ATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAA-TTT-TA--TCAATGCATCA-AGC 132
|||| || |||| ||| ||||||||||||||||||| ||| || |||| | || | |
Sbjct 336 ATAGGTTGCTTT-GATGTTAGGTCTGAGAAATTCAAGTTTCTAAATCAAAACC-CAGA-C 392
Query 133 TTCCTTT-T--TTCATCTAC-AAAATTGATAAACTACAAAGGTAAATTAGGTGGGATTGA 188
| |||| | || ||||| ||||| ||||||||| || |||||||| |||| ||| |
Sbjct 393 TGCCTTACTAGTTGGTCTACTAAAAT-GATAAACTATAAGGGTAAATTTGGTGTTATTAA 451
Query 189 TTTGGC-GTATAATCATGGTGGTGTATATCCCGTTGAGTTACGTATGTGGGTTCTAGAGG 247
||||| | ||||| ||| | ||| || |||| || |||| ||||| |||||||||||
Sbjct 452 TTTGGAAG-ATAATTATGCTCGTGGATTTCCCCTTAAGTTGCGTATATGGGTTCTAGACA 510
Query 248 ATGTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCGGAGACC-ATTGAATTT 306
||||||||||||| |||||| ||| | ||| ||| ||||| || | | | |||| |
Sbjct 511 ATGTCGAGAAACAAGAATGGACGACATATGCCTACACTTTGA-GG-G-CTGA--GAATAT 565
Query 307 CAG-CA-GTG-TAACTA-CAATATTTGCGTTGGTGGGATGAATGCTAT-AGGTGAAATTG 361
|| || | | ||| | | |||||| |||| |||| ||| |||| | |||||||||||
Sbjct 566 -AGTCAAG-GATAAA-AGCTATATTTATGTTGTTGGGGTGACTGCT-TCAGGTGAAATTG 621
Query 362 TTTTTTCGGAGTCATATAT-ATCTACATCCAAACCGTTTTATGTTTTCTACTTCAATCCC 420
|||| || || | || | | ||| ||||||||||||||||| ||||| ||||||
Sbjct 622 TTTT---GG---CAAAAATGAA-TGCATATAAACCGTTTTATGTTTTTTACTTTAATCCC 674
Query 421 GAAAAGAA 428
||||||||
Sbjct 675 GAAAAGAA 682
> Ahg922214 jgi|Araly1|922214|scaffold_103495.1
Length=969
Score = 139 bits (75), Expect = 2e-32
Identities = 277/368 (75%), Gaps = 39/368 (11%)
Strand=Plus/Plus
Query 79 ATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAA-TTT-TA--TCAATGCATCA-AGC 132
|||| || |||| ||| ||||||||||||||||||| ||| || |||| | || | |
Sbjct 336 ATAGGTTGCTTT-GATGTTAGGTCTGAGAAATTCAAGTTTCTAAATCAAAACC-CAGA-C 392
Query 133 TTCCTTT-T--TTCATCTAC-AAAATTGATAAACTACAAAGGTAAATTAGGTGGGATTGA 188
| |||| | || ||||| ||||| ||||||||| || |||||||| |||| ||| |
Sbjct 393 TGCCTTACTAGTTGGTCTACTAAAAT-GATAAACTATAAGGGTAAATTTGGTGTTATTAA 451
Query 189 TTTGGC-GTATAATCATGGTGGTGTATATCCCGTTGAGTTACGTATGTGGGTTCTAGAGG 247
||||| | ||||| ||| | ||| || |||| || |||| ||||| |||||||||||
Sbjct 452 TTTGGAAG-ATAATTATGCTCGTGGATTTCCCCTTAAGTTGCGTATATGGGTTCTAGACA 510
Query 248 ATGTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCGGAGACC-ATTGAATTT 306
||||||||||||| |||||| ||| | ||| ||| ||||| || | | | |||| |
Sbjct 511 ATGTCGAGAAACAAGAATGGACGACATATGCCTACACTTTGA-GG-G-CTGA--GAATAT 565
Query 307 CAG-CA-GTG-TAACTA-CAATATTTGCGTTGGTGGGATGAATGCTAT-AGGTGAAATTG 361
|| || | | ||| | | |||||| |||| |||| ||| |||| | |||||||||||
Sbjct 566 -AGTCAAG-GATAAA-AGCTATATTTATGTTGTTGGGGTGACTGCT-TCAGGTGAAATTG 621
Query 362 TTTTTTCGGAGTCATATAT-ATCTACATCCAAACCGTTTTATGTTTTCTACTTCAATCCC 420
|||| || || | || | | ||| ||||||||||||||||| ||||| ||||||
Sbjct 622 TTTT---GG---CAAAAATGAA-TGCATATAAACCGTTTTATGTTTTTTACTTTAATCCC 674
Query 421 GAAAAGAA 428
||||||||
Sbjct 675 GAAAAGAA 682
> Ahg336206 jgi|Araly1|336206|fgenesh1_pg.C_scaffold_1002771
Length=2166
Score = 128 bits (69), Expect = 3e-29
Identities = 338/459 (74%), Gaps = 53/459 (12%)
Strand=Plus/Plus
Query 6 CCTTTTTGGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCT--A-GTTCAG- 61
|||||| |||||| ||||||||| ||||| |||||||||||||| ||| | ||| |
Sbjct 263 CCTTTTGGGAAAG-GATATGCATTAATGGAGTTTTGTATTACTC-AGCTCAACATTCTGA 320
Query 62 CTC-A-T-G-GATA--TC-T-TCTGATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCA 112
|| | | | | | || | | ||||||||| | |||||| ||||||||||||||||||
Sbjct 321 TTCTAGTCGAAAAAGGTCTTATGTGATAGTTTGC-TTTGATGTTAGGTCTGAGAAATTCA 379
Query 113 ATTTTATCAATGCATCAAGCTTCCTTTTTTCAT-CTACAAAATTGATAAACTACAAAGGT 171
| || || | || | || | | |||| | | | ||||||||||| || ||
Sbjct 380 AGTTCAT--ACGC-GC-AG--AAC-GCTGTCATGGT-C--AGTTGATAAACTATAAGGGG 429
Query 172 AAATTAGGTGGGATTGATTTGGCGTATAATCATGGTGGT-GTATATCCCGTTGAGTT-AC 229
|| ||| ||||| || || || ||||||| ||||||| || | |||| || |||| |
Sbjct 430 AAGTTATGTGGGGTTAATGTGTAGTATAATTGTGGTGGTGGT-TTTCCCCTTAAGTTGA- 487
Query 230 GTATGTGGGTTCTAGAGGATGTCGAGAAACACG-AATGGTCGAGACATGTTTACTCTTTG 288
|||||||||||||||||||||||||||||| || ||||||| | | |||| |||||||||
Sbjct 488 GTATGTGGGTTCTAGAGGATGTCGAGAAAC-CGGAATGGTCTAAATATGTATACTCTTTG 546
Query 289 CCGGAGACCATTGA-ATTTCAGCAGTGTAACTACAATATTTGCGTTGGTGGGATGAATGC 347
|| | | | || ||| | ||| | | | || ||| |||| |||||||| |||
Sbjct 547 T-GG-G-C--T-GATATTA-A--AGT-TGCCCGCTATCTTTCCGTTTCTGGGATGACTGC 596
Query 348 TATAGGTGAAATTGTTTTTTCGGA-GTCATATATATCTACATCCAAACCGTTTTATGTTT 406
|| ||||| |||||||| ||| | | | | | | | || || || || |||||||| |
Sbjct 597 TACCGGTGACATTGTTTTGTCG-ATGG-A-A-A-A-C-ACGTCTAACCCATTTTATGTCT 649
Query 407 TCTACTTCAATCCCGAAAAGAAAAACACTTTAAGGTGTT 445
||||||||||||||| || ||||| | ||| || |||||
Sbjct 650 TCTACTTCAATCCCGGAAGGAAAA-CTCTTCAATGTGTT 687
Score = 108 bits (58), Expect = 4e-23
Identities = 213/283 (75%), Gaps = 29/283 (10%)
Strand=Plus/Plus
Query 155 TGATAAACTACAAAGGTAAATTAGGTGGGATTGATTTGGCGTATAATCATGGTGGT-GTA 213
|||||||||| || || |||||| ||| |||| || ||| |||| | ||| |||| | |
Sbjct 1640 TGATAAACTATAAGGGAAAATTATGTGAGATTAATGTGGAGTATGCTTATGATGGTAG-A 1698
Query 214 TATCCCGTTGAGTT-ACGTATGTGGGTTCTAGAGGATGTCGAGAAACACG-AATGGTCGA 271
| |||| |||| | |||||||||||||||||||||||||||||| || |||||||||
Sbjct 1699 TTTCCCCCCAAGTTGA-GTATGTGGGTTCTAGAGGATGTCGAGAAAC-CGGAATGGTCGA 1756
Query 272 GACATGTTTACTCTTTGCCGGA-GACCATTGA-ATTTCAGCAGTGTAACTA-CAATATTT 328
| |||| ||||||||| | | | |||| | | | ||| | | | | || |||
Sbjct 1757 AATATGTGTACTCTTTG--G-ATG----TTGAGAGTA-A--AGT-TGCC-AGCTATCTTT 1804
Query 329 GCGTTGGTGGGATGAATGCTATAGGTGAAATTGTTTT-TTCGGAGTCATATATATCTACA 387
|||| |||||||| ||||| ||||| |||||||| || | | | ||| | | |||
Sbjct 1805 ACGTTTCTGGGATGACTGCTACCGGTGACATTGTTTTGTT-G-A-TGG-ATA-A-C-ACA 1857
Query 388 TCCAAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAAAA 430
|| || || |||||||| |||||||||||||| |||| |||||
Sbjct 1858 TCTAACCCTTTTTATGTCTTCTACTTCAATCCGGAAAGGAAAA 1900
> Ahg922192 jgi|Araly1|922192|scaffold_103473.1
Length=973
Score = 115 bits (62), Expect = 3e-25
Identities = 270/362 (75%), Gaps = 47/362 (13%)
Strand=Plus/Plus
Query 77 TGATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAATTTTATCA-ATGCATCAAGCTT 134
||||||||| | || ||| ||||||| ||||||||||| || | | | ||| | ||
Sbjct 433 TGATAGTTTGCCTT-GATGTTAGGTCCGAGAAATTCAAGTTCGT-AGACGCA--AT-CTG 487
Query 135 CCTTTTTTCATCTACAAAATTGATAAACTACAAAGGTAAATTAGGTGGGATTGATTTGG- 193
| || ||||||| | | ||||||||||| || || ||||||||||||||| |||||
Sbjct 488 C-TTGTTTCATC-A-A---TTGATAAACTATAAGGGGAAATTAGGTGGGATTAATTTGAA 541
Query 194 CGTATAATCATGGTGGTGTATATCCCGTTGAGTTACGTATGTGGGTTCTAGAGGATGTCG 253
| || ||| |||| | | | ||| || | | ||||||||||||||| |||||||
Sbjct 542 C-TACAATAATGGA--T-T-TC-CCC-TT-A---A--TATGTGGGTTCTAGAAGATGTCG 588
Query 254 AGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCG-GA-GACCATTGAA-T--TTCA 308
||||||| |||||||||| | |||| ||||||||| | | || | | || | || |
Sbjct 589 AGAAACAAGAATGGTCGAAATATGTATACTCTTTGT-GTGCTGAG-AGTAAAGTCGTTAA 646
Query 309 GCAGTGTAACTACAATATTTGC-GTTGGTGGGATGAATGCTATAGGTGAAATTGTTTTTT 367
| || |||| ||| ||| | |||| |||||||| ||||| |||||| || ||||| |
Sbjct 647 G--GT-TAACCCCAAGCTTT-CTGTTGTTGGGATGACTGCTACAGGTGATATAGTTTTGT 702
Query 368 CGGAGTCA-TATATATCTACATCCAAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAG 426
||| | | | |||||||| ||||| ||||||||||| |||||||||||||||| |
Sbjct 703 CGGGGA-AGTTTATATCTA-ATCCA-----TTTTATGTTTTTTACTTCAATCCCGAAAGG 755
Query 427 AA 428
||
Sbjct 756 AA 757
> Ahg922179 jgi|Araly1|922179|scaffold_103460.1
Length=2001
Score = 111 bits (60), Expect = 3e-24
Identities = 337/461 (73%), Gaps = 57/461 (12%)
Strand=Plus/Plus
Query 1 ATGAACCTTTTT-GGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCT-AGTT 58
|||| ||||||| |||||| |||||||||||||||||||||||||||| | || |
Sbjct 1294 ATGAGCCTTTTTGGGAAAG-GATATGCATCAATGGGGTTTTGTATTACAAAG-CTCAC-- 1349
Query 59 CAGCTC-ATGGATA--TCTTCTG-A-TAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCA 112
||| | ||||| | |||| || | |||||| |||| ||| ||||||||||||||||||
Sbjct 1350 CAGTTTGATGGA-AGGTCTTATGTAATAGTTTGCTTT-GATGTTAGGTCTGAGAAATTCA 1407
Query 113 ATTTTATCAATGCATCAAGCT-TCCTTT-TTTCATCTACAAAATTGATAAACTACAAAGG 170
| || || | ||| || | | | | ||| | || ||| ||||||||||| || ||
Sbjct 1408 AGTTCATTGAGGCAACATTTTGTAATATGTTT-A-CT-CAA--TTGATAAACTATAAGGG 1462
Query 171 TAAATTAGGTG-GGATTGATTTGGCGTATAATCATGGTGGT----GTAT-A----T-CCC 219
||||||||||| || || ||||| | || | ||| |||| || | | | |||
Sbjct 1463 TAAATTAGGTGTGG-TTAATTTGAAGAATGTTGATGATGGTACAAGTTTTAGGCATACCC 1521
Query 220 GTTGAGTTACGTATGTGGGTTCTAGAGGATGTCGAGAAACACG-AATGGTCGAGAC-ATG 277
||||||| |||||||||||||| ||| |||| |||||| | | |||||||| || |||
Sbjct 1522 -TTGAGTTTCGTATGTGGGTTCTGGAGCATGTTGAGAAA-ATGGAATGGTCG-GAATATG 1578
Query 278 TTTACTCTTTGCCGGAGACCATTGAATTTCAGCAG-TGTAACTACAA-T--AT-TTGC-G 331
| ||| ||||| ||| | | |||| |||| | || | || | || ||| |
Sbjct 1579 TCTACACTTTGTTGGATAGTAATGAAG--CAGCTGATG-ATCTTGTTGTTGATCTTGTTG 1635
Query 332 TTGGT-GGGATGAATGCTA-TAGGTGAAATTGTTTTTTCGGAGTCATATATATCTACATC 389
||| | ||||||| ||||| | ||||| ||| |||| ||| || ||| ||| | | |
Sbjct 1636 TTG-TCGGGATGACTGCTACT-GGTGATATTATTTTGTCGAAG--ATAGATA-C-ATGTG 1689
Query 390 CAAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAAAA 430
|| ||| |||||||||| | |||||||||||||| |||||
Sbjct 1690 -AA-CCGATTTATGTTTTTTTCTTCAATCCCGAAAGGAAAA 1728
> Ahg922296 jgi|Araly1|922296|scaffold_103577.1
Length=1162
Score = 110 bits (59), Expect = 1e-23
Identities = 269/363 (74%), Gaps = 43/363 (12%)
Strand=Plus/Plus
Query 80 TAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAATTTTATCAATGCATCAAGCTTCCTT 138
|||||| |||| ||| |||||||||| ||| |||| ||| | ||||| || || | ||
Sbjct 406 TAGTTTGCTTT-GATGTTAGGTCTGAAAAAGTCAAGTTTGTTGATGCA--AA-CTGCGTT 461
Query 139 TTT--TCAT----CTACAAAATTGATAAACTACAAAGGTAAATTAGGTGGGATTGATTTG 192
||| | || |||| | |||||||||||| || |||||||| |||| ||| ||| |
Sbjct 462 TTTGATGATTGGTCTACTACATTGATAAACTATAAGGGTAAATTCGGTGTTATTAATT-G 520
Query 193 GCGTATAATCATGGTGGTG-TATATCCCGTTGAGTT-ACGTATGTGGGTTCTAGAGGATG 250
| | | | ||| || || | ||| || ||||||| | |||||||||||||||||||||
Sbjct 521 G---A-AGT-ATGATGATGCT-TATGCCATTGAGTTGA-GTATGTGGGTTCTAGAGGATG 573
Query 251 TCGAGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCGGAGACCATTGAATTTCAGC 310
||||||| |||||||| | | |||| ||| |||| ||||||| || ||| |||
Sbjct 574 ---AGAAACATGAATGGTCAAAATATGTCTACACTTTTCCGGAGA---TT-AATAA-AGC 625
Query 311 --AGTGTAACTACAATATTTG-CGTTGGTGG-GATGAATGCTATAGGTGAAATTGTTTTT 366
| || | || | | || | | ||| ||| | ||| |||| |||||||||||| |||
Sbjct 626 CCA-TG-ATCT-CGACCTTAGAC-TTGATGGAG-TGACTGCTGCAGGTGAAATTGTATTT 680
Query 367 TCGGAG-TCATATATATCTACATCCAAACCGTTTTATGTTTTCTACTTCAATCCCGAAAA 425
|| || | | | |||||||| ||||||||||||||||| |||| |||||||| ||
Sbjct 681 TCA-AGGTGG-A-A-ATCTACATGTAAACCGTTTTATGTTTTATACTACAATCCCGGAAG 736
Query 426 GAA 428
|||
Sbjct 737 GAA 739
> Ahg938652 jgi|Araly1|938652|scaffold_502843.1
Length=1075
Score = 93.5 bits (50), Expect = 1e-18
Identities = 163/214 (76%), Gaps = 22/214 (10%)
Strand=Plus/Plus
Query 220 GTTGAGTTACGTATGTGGGTTCTAGAGGATGTCGAGAAACACGAATGG-TCGAGACATGT 278
|||||||| ||||||||||||||||||||||||||||||| || ||| | || | ||||
Sbjct 580 GTTGAGTTGTGTATGTGGGTTCTAGAGGATGTCGAGAAACAGGATTGGGT-GAAATATGT 638
Query 279 TTACTCTTTGCCGGAGACCATTGAATTTCA-GCAGTGTAACTAC-AATATTTGC-GTTGG 335
||| || |||| |||| || ||| | | | || | || | ||| ||| | ||||
Sbjct 639 CTACACTCTGCCAGAGA--AT-GAAGTCCTTG--GT-TC-CTGCGAAT-TTT-CAGTTGC 689
Query 336 TGG-GATGAATGCTATAGGTGAAATTGTTTTTTCGGAGTCATATATATCTACATCCAAAC 394
||| | ||| ||| | ||| || ||||| || | | | | | | |||| |||| ||||
Sbjct 690 TGGAG-TGACTGCAACAGGGGATATTGTCTTGT-GTA-TGA-A-ATAT--ACATGTAAAC 742
Query 395 CGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 428
||| |||||||||||||||||||||||||||||
Sbjct 743 CGTACTATGTTTTCTACTTCAATCCCGAAAAGAA 776
Score = 63.9 bits (34), Expect = 9e-10
Identities = 88/112 (79%), Gaps = 11/112 (10%)
Strand=Plus/Plus
Query 16 AAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCTAG---TT-C--AGCTCATGGA 69
||| ||||||||||||||||||||||||||||| | ||||| || | |||| | |
Sbjct 353 AAGGGATATGCATCAATGGGGTTTTGTATTACT-TAGCTAGAACTTACTTAGCTGAAACA 411
Query 70 -TATCTTCTGATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAATTTTAT 119
| |||| |||||||| |||| ||| |||| |||||| | ||||| |||||
Sbjct 412 CTTTCTT-TGATAGTTCGCTTT-GATGTTAGCTCTGAGGAGTTCAAGTTTAT 461
> Ahg923024 jgi|Araly1|923024|scaffold_104305.1
Length=970
Score = 87.9 bits (47), Expect = 6e-17
Identities = 211/285 (74%), Gaps = 31/285 (11%)
Strand=Plus/Plus
Query 152 AATTGATAAACTACAAAGGTAAATTAGGTGGGATTGATTTGGCGTATAATCATGGTGGTG 211
|||||||||||||||| || |||||||||| |||| | || | || || ||| || ||
Sbjct 481 AATTGATAAACTACAAGGGAAAATTAGGTGTGATTTA-TT-ATG-ATGATTATGATGATG 537
Query 212 TATATC-CCGTTGAGTTACGTATGTGGGTTCTAGAGGATGTC-GAGAAACACGAATGG-T 268
| | | ||||||| ||| |||||||||||||||||| | |||||||| |||||| |
Sbjct 538 ---A-CGCTATTGAGTTGCGTTTGTGGGTTCTAGAGGATG-CGGAGAAACAGGAATGGTT 592
Query 269 CGAGACATGTTTACTCTTTGCCGGAGACCATTGAATTTCAGCAGTGTAACTACAATATTT 328
|| | ||| ||| ||||| || || | | || ||| || | | ||| |||
Sbjct 593 GGA-ATATGCCTACACTTTG-AGG-GATGA-T-AAATTC-TTAG-ATCATTAC---GTTT 642
Query 329 GCGTTGGTGGGA-TGAATGCTAT-AGGTGAAATTGTTTTTTCGGAGTCATATATATCTAC 386
|| | |||||| ||| |||| | |||||||||||||| || || | | || | |||
Sbjct 643 CCG-TCGTGGGAGTGACTGCT-TCGGGTGAAATTGTTTTGTC-GA-TGGGAGAT-TTTAC 697
Query 387 A--TCCA-AACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 428
| | | |||| ||||||||||||||||||||||||||||||||
Sbjct 698 ATTTAAACAACCCTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 742
> Ahg343873 jgi|Araly1|343873|fgenesh1_pg.C_scaffold_4000215
Length=825
Score = 73.1 bits (39), Expect = 2e-12
Identities = 73/88 (83%), Gaps = 8/88 (9%)
Strand=Plus/Plus
Query 345 TGCTATAGGTGAAATTGTTTTTTCGGA-GTCAT-A-TATATCTACATCCA-AACCGTTTT 400
|||| | |||||||| |||||||| || || | | |||| || | | | |||||||||
Sbjct 555 TGCTTTCGGTGAAATAGTTTTTTC-GATGT-GTGAGTATA-CT-CCTGGACAACCGTTTT 610
Query 401 ATGTTTTCTACTTCAATCCCGAAAAGAA 428
||||||||||||||||||||||||||||
Sbjct 611 ATGTTTTCTACTTCAATCCCGAAAAGAA 638
> Ahg936065 jgi|Araly1|936065|scaffold_500256.1
Length=1293
Score = 71.3 bits (38), Expect = 6e-12
Identities = 46/50 (92%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 222 TGAGTTACGTATGTGGGTTCTAGAGGATGTCGAGAAACACGAATGGTCGA 271
|||||| ||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct 832 TGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACATGAATGGTCGA 881
> Ahg346781 jgi|Araly1|346781|fgenesh1_pg.C_scaffold_5000173
Length=627
Score = 69.4 bits (37), Expect = 2e-11
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Plus
Query 392 AACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 428
|||||||||||||||||||||||||||||||||||||
Sbjct 416 AACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 452
> Ahg936741 jgi|Araly1|936741|scaffold_500932.1
Length=617
Score = 65.8 bits (35), Expect = 3e-10
Identities = 67/81 (83%), Gaps = 8/81 (10%)
Strand=Plus/Plus
Query 352 GGTGAAATTGTTTTTTCGGA-G-TC-A-TATATATCTACATCCAAACCGTTTTATGTTTT 407
|||||||| || ||||| || | | | |||| ||||| | | ||||||||||||||||
Sbjct 340 GGTGAAATAGTATTTTC-GATGCGCAAGTATACATCTA-A-AC-AACCGTTTTATGTTTT 395
Query 408 CTACTTCAATCCCGAAAAGAA 428
||||||||||||||||| |||
Sbjct 396 CTACTTCAATCCCGAAAGGAA 416
> Ahg936067 jgi|Araly1|936067|scaffold_500258.1
Length=1140
Score = 63.9 bits (34), Expect = 9e-10
Identities = 36/37 (97%), Gaps = 0/37 (0%)
Strand=Plus/Plus
Query 392 AACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 428
||||||||||||||||||||||||||||||||| |||
Sbjct 855 AACCGTTTTATGTTTTCTACTTCAATCCCGAAAGGAA 891
> Ahg336227 jgi|Araly1|336227|fgenesh1_pg.C_scaffold_1002792
Length=708
Score = 63.9 bits (34), Expect = 9e-10
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand=Plus/Plus
Query 6 CCTTTTTGGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCTA 55
|||||| | |||| ||||||||||||||||||||||||||||| || |||
Sbjct 172 CCTTTTAGAAAAGGGATATGCATCAATGGGGTTTTGTATTACTTTG-CTA 220
> Ahg359033 jgi|Araly1|359033|fgenesh1_pg.C_scaffold_9000073
Length=783
Score = 58.4 bits (31), Expect = 4e-08
Identities = 76/96 (79%), Gaps = 9/96 (9%)
Strand=Plus/Plus
Query 338 GGA-TGAATGCTATAGGTGAAATTGTTTTTTCGGA-GTCATA-TAT--ATCTACATCCAA 392
||| ||| | |||| ||||| ||| ||||||| || | ||| ||| ||| | | | |
Sbjct 433 GGAGTGACTACTATGGGTGACATTATTTTTTC-GATGGGATATTATGAATCGA-A-AC-A 488
Query 393 ACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 428
||||||||||||||||||||||||||||| || |||
Sbjct 489 ACCGTTTTATGTTTTCTACTTCAATCCCGGAAGGAA 524
> Ahg495332 jgi|Araly1|495332|fgenesh2_kg.8__1148__AT5G52620.1
Length=1068
Score = 54.7 bits (29), Expect = 6e-07
Identities = 36/39 (92%), Gaps = 1/39 (3%)
Strand=Plus/Plus
Query 16 AAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCT 54
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Sbjct 590 AAGGGATATGCATCAATGGGGTTTTGTATTACA-TGGCT 627
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 16139814147
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5