BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G31400.1 Length=837 Score E Sequences producing significant alignments: (Bits) Value Ahg336568 jgi|Araly1|336568|fgenesh1_pg.C_scaffold_1003133 809 0.0 Ahg913344 jgi|Araly1|913344|Al_scaffold_0001_3598 676 0.0 Ahg905868 jgi|Araly1|905868|Al_scaffold_0003_2996 139 3e-32 Ahg905866 jgi|Araly1|905866|Al_scaffold_0003_2994 121 1e-26 Ahg930958 jgi|Araly1|930958|scaffold_303415.1 91.6 8e-18 Ahg898788 jgi|Araly1|898788|Al_scaffold_0005_2754 86.1 4e-16 Ahg898777 jgi|Araly1|898777|Al_scaffold_0005_2743 82.4 5e-15 Ahg937123 jgi|Araly1|937123|scaffold_501314.1 78.7 6e-14 Ahg480146 jgi|Araly1|480146|fgenesh2_kg.3__2847__AT2G05420.1 76.8 2e-13 Ahg324310 jgi|Araly1|324310|fgenesh1_pm.C_scaffold_5001854 76.8 2e-13 Ahg924373 jgi|Araly1|924373|scaffold_105654.1 75.0 8e-13 Ahg938811 jgi|Araly1|938811|scaffold_503002.1 71.3 1e-11 Ahg937127 jgi|Araly1|937127|scaffold_501318.1 63.9 2e-09 Ahg897254 jgi|Araly1|897254|Al_scaffold_0005_1220 60.2 2e-08 > Ahg336568 jgi|Araly1|336568|fgenesh1_pg.C_scaffold_1003133 Length=849 Score = 809 bits (438), Expect = 0.0 Identities = 716/846 (85%), Gaps = 35/846 (4%) Strand=Plus/Plus Query 10 CAATATGAAAAGAGGATAACATGGACGATTAAGAATTTCTCCTCTTTGCAATCTCATGCA 69 ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||| | Sbjct 10 CAATATGAAAAGAAGATAACATGGACGATCAAGAATTTCTCCACTTTGCAATCTAATG-A 68 Query 70 A-TTTATTTTGATATTTTTGTAGTTGGGGACACCAAATGGCATCTTCTGGCCTATCCCAA 128 | |||||| |||| ||| |||||||| ||| ||||||||| |||||||||||||||||| Sbjct 69 ATTTTATTCCGATAATTTCGTAGTTGGTGACTCCAAATGGCGTCTTCTGGCCTATCCCAA 128 Query 129 GGGATATGGTGATAGCATTAATAAATGTTTGTCTCTGTTTCTTGG-TGTTCCTGATCCTG 187 |||| |||| ||| | |||||||| |||| |||||||||| ||| |||| ||||| ||| Sbjct 129 GGGAAATGGAGATGGTTTTAATAAAAGTTTTTCTCTGTTTC-TGGCTGTTGCTGATTCTG 187 Query 188 -ATGATTTGCCTTCTGGTTGGAAAAGACACATCATATATCGTCTTACTGTTGTTAATCAA 246 || ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 188 AAT-CTTTGCCTAATGGTTGGAAAAGACACATCAAATATCGTCTAACTGTTGTTAATCAA 246 Query 247 ATGTCGGAGAAACTCTCCAAACAGGAAGTAGCACGGGGCGGGTTTTACCCGAGGTCTCTT 306 |||||||||||||| || |||||||||| | || | ||||| | | || |||||| Sbjct 247 ATGTCGGAGAAACTTTCTAAACAGGAAGAATTACAATCCTGGTTTGATCAGAATTCTCTT 306 Query 307 ACCTTCGG-TTCCCAAGTAATGCTTCCACTTA-CAGAAC-T-TT-------ATGGTGGGT 355 | || || | ||| || ||||||||| |||| || ||| | || ||| ||||| Sbjct 307 AGCTGGGGCTACCC-AGCAATGCTTCCCCTTACCA-AACTTGTTGACGAAAATGATGGGT 364 Query 356 TTTTGGTTAGTGGCCAAGTCAAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGCA 415 || |||| | ||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 365 TTCTGGTGAATGGAGAAGTCAAGGTTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGCA 424 Query 416 AGTCAGATGTGTTAGAGGAAACTTTGTTAGTTAATGGAG-GCATCAATGTCAATGGGTTT 474 | ||||||||||||| ||||||||| |||||| | ||| ||||| |||||||||||||| Sbjct 425 AATCAGATGTGTTAGTGGAAACTTTATTAGTTCA-GGAAAGCATCGATGTCAATGGGTTT 483 Query 475 CAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTCAAAAATCACCCAGACATT 534 |||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||| Sbjct 484 CAAGTTCTTCCTTCTCAGGTAGACTCTGTGAACAATCTCTTTAAAAATTACCCAGACATT 543 Query 535 GCATCAAACTTCCGTCTGGAAAAC-A-CTCATCTAAGAACTACATACTTGAATAGCCTAC 592 |||||||| ||| ||||||| ||| | || ||| ||| | |||||| |||||||||||| Sbjct 544 GCATCAAAATTCTGTCTGGAGAACCAACT--TCTGAGAGCAACATACATGAATAGCCTAC 601 Query 593 TATGCTTGACTGAGCTTCTGTGCCAGTCCCCTCATAAACTCTCCAATGTTGATCTCGCCA 652 |||||||||||||| ||||| ||||||||||| | |||||||| | |||||||||||||| Sbjct 602 TATGCTTGACTGAGATTCTGAGCCAGTCCCCTGAGAAACTCTCTAGTGTTGATCTCGCCA 661 Query 653 ATGCGCACTGTACTCTAACTTGTGTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGAAA 712 |||| || ||||| ||| ||| | |||||||||||||||||||||||||||||||||| | Sbjct 662 ATGCACATTGTACACTATCTTCTCTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGAGA 721 Query 713 AGAAACTGAAAGAGGTTGGTAAGACTCGGATGCAACAACTTGAACAAAATTTGAAGGACT 772 |||||||||||||| || || | |||||| ||||||||||||| ||| |||||||||||| Sbjct 722 AGAAACTGAAAGAGCTTCGTGATACTCGGGTGCAACAACTTGAGCAAGATTTGAAGGACT 781 Query 773 TGAAGGAGA-GTTTATGCTGGAGTTCTGACGATGAGGATGACCTGAGTCGA-TCTGTT-A 829 ||||||| | ||||| |||||| | || |||||||||| | ||||| |||||| | Sbjct 782 TGAAGGAAAAGTTTACGCTGGA---C-GA---TGAGGATGACTTTTGTCGACTCTGTTTA 834 Query 830 AGACTT 835 |||||| Sbjct 835 AGACTT 840 > Ahg913344 jgi|Araly1|913344|Al_scaffold_0001_3598 Length=828 Score = 676 bits (366), Expect = 0.0 Identities = 654/789 (83%), Gaps = 36/789 (5%) Strand=Plus/Plus Query 10 CAATATGAAAAGAGGATAACATGGACGATTAAGAATTTCTCCTCTTTGCAATCTCATGCA 69 ||||||||||||| |||||| |||||||||||||||||||||||||||| |||| || | Sbjct 10 CAATATGAAAAGAAGATAACCTGGACGATTAAGAATTTCTCCTCTTTGCCATCTGATAAA 69 Query 70 ATTTATTTTGATATTTTTGTAGTTGGGGACACCAAATGGCATCTTCTGGCCTATCCCAAG 129 |||| || ||||| ||| |||||||| || ||||||||| |||| |||||||||||||| Sbjct 70 ATTTGTTCTGATAATTTCGTAGTTGGTGATTCCAAATGGCGTCTTGTGGCCTATCCCAAG 129 Query 130 GGATATGGTGATAG-CATTAATAAATGTTTGTCTCTGTTTCTTGG-TGTTCCTGATCCTG 187 ||| |||| ||||| | |||||||| ||||||||||||||| ||| |||| ||||| ||| Sbjct 130 GGACATGGGGATAGTC-TTAATAAAAGTTTGTCTCTGTTTC-TGGCTGTTGCTGATTCTG 187 Query 188 -ATGATTTGCCTTCTGGTTGGAAAAGACACATCATA-TATCGTCTTACTGTTGTTAATCA 245 || |||||||| ||||||||||||| ||| || | ||||| | |||||||||||||| Sbjct 188 AAT-CTTTGCCTTATGGTTGGAAAAGAGACA-CAAAGTATCGCCAAACTGTTGTTAATCA 245 Query 246 AA-TGTCGGAGAAACTCTCCAAACAGGAAGTAGCACGGGGCGGGTTTTACCCGAGGTCTC 304 || | ||||||||||||||| ||||| ||| | || | ||||| | | || | | Sbjct 246 AACT-TCGGAGAAACTCTCCCAACAGAAAGGAAAAC---CCTGGTTTAATCAGAATTGTG 301 Query 305 TTACCTTCGGTTCCCAAGT-AATGCTTCCACTTACAGAA---CTT----T--ATGGTGGG 354 | | || |||| |||| | |||| |||| ||||| ||| ||| | |||||||| Sbjct 302 TCAGCTGGGGTTTCCAA-TCAATGGTTCCCCTTACCGAACTTCTTGACATAAATGGTGGG 360 Query 355 TTTTTGGTTAGTGGCCAAGTCAAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGC 414 ||| |||| | ||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TTTCTGGTGAATGGAGAAATCAAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGC 420 Query 415 AAGTCAGATGTGTTAGAGGAAACTTTGTTAGTTAATGGAGGCATCAATGTCAATGGGTTT 474 ||||||||||||||||||||||||| ||||| |||| | ||||| |||||||||||||| Sbjct 421 AAGTCAGATGTGTTAGAGGAAACTTCATTAGTAAATGAAAGCATCGATGTCAATGGGTTT 480 Query 475 CAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTCAAAAATCACCCAGACATT 534 |||||||||||||||||||||||||||||||| | ||| || | ||| |||||||||||| Sbjct 481 CAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGTCTTTTTATAAAGCACCCAGACATT 540 Query 535 GCATCA-AACTTCCGTCTGGAA-AACACTCATCTAAGAACTA-CATACTTGAATAGCCTA 591 |||||| || ||||||| || ||| | || || ||||| | |||||||||||||| || Sbjct 541 GCATCACAA-TTCCGTCCA-AAGAACCCACACCTGAGAAC-AGCATACTTGAATAGCATA 597 Query 592 CTATGCTTGACTGAGCTTCTGTGCCAGTCCCCTC-ATAAACTCTCCAATGTTGATCTCGC 650 ||| ||||| | ||| ||||||||| ||||| | | |||||||||||| |||||| || Sbjct 598 CTAAGCTTGTCAGAGAGTCTGTGCCAATCCCC-CGAGGAACTCTCCAATGCTGATCTGGC 656 Query 651 CAATGCGCACTGTACTCTAACTTGTGTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGA 710 ||||| ||||||| |||||||||||||||||||| || ||||| |||||||||||||| Sbjct 657 TAATGCATACTGTACACTAACTTGTGTGACAAAAGCGGGGTTTAAATTGGATTGGTTGGA 716 Query 711 AAAGAAACTGAAAGAGGTTGGTAAGACTCGGATGCAACA-ACTTGAACAA-AATTTGAAG 768 |||||||||||||||| ||||| || ||||| ||||| | | |||| || |||| |||| Sbjct 717 AAAGAAACTGAAAGAGATTGGTGAGGCTCGGCTGCAAGAGA-TTGAGGAAGAATT-GAAG 774 Query 769 GACTTGAAG 777 ||| ||||| Sbjct 775 GACATGAAG 783 > Ahg905868 jgi|Araly1|905868|Al_scaffold_0003_2996 Length=882 Score = 139 bits (75), Expect = 3e-32 Identities = 520/722 (72%), Gaps = 81/722 (11%) Strand=Plus/Plus Query 39 TAAGA-ATTTCTCCTCTTTGCAATCT-CATGCAATTTATTTTGATATTTTTGTAGTTG-G 95 ||||| ||| || ||||||||| | ||| | ||||||| ||||| || || || | Sbjct 38 TAAGAGATTCCTTTTCTTTGCAAGATGCAT-CGATTTATTCTGATAAATTCGTTGTCGAT 96 Query 96 GGACACCAAATGGCATCTTCTGG-CCTATCCCAAGGGATATGGTGATA-GCATTAATAAA 153 || | |||||||||||||| || |||||||||||||||| | | | || |||| Sbjct 97 GG-CTGCAAATGGCATCTTC-GGTTCTATCCCAAGGGATATAAT-A-AGGC--TAAT--- 147 Query 154 TGTTTGTCTCTGTTTCTTGGTGTTCCTGATCCTG-ATGATTTGCCT-TCTGGTTGGAAAA 211 ||||||||||||| ||| |||||| ||| || || ||||||| | ||| |||| || Sbjct 148 TGTTTGTCTCTGTATCTACATGTTCCGGATATTGAAT-CTTTGCCTAT-TGGATGGAGAA 205 Query 212 GACACATCATATATCGTCT-T-ACTGTT-GTTAATCAA-ATGTC-GGAGAAACTCTCC-A 265 |||| | || || ||| | || || || |||||| || || ||| ||||||||| | Sbjct 206 TACAC-GC-TAAATTTTCTCTAAC-ATTAGTAAATCAATAT-TCAGGA-AAACTCTCCAA 260 Query 266 AACAGGAAGTAG-CACGGGGCGGGTTTTACCCG-AGGTCTCTTACCT-TCGGTTCCCAAG 322 || | | || || | | | | ||||| | | | ||| ||| || || |||| |||| Sbjct 261 AATAAG-AG-AGACTCAGCACTGGTTTGATCAGAAGG-CTCCTAACTGGGGGTT-TCAAG 316 Query 323 TAATGCTT-CCACTTACAGAACTTTATG-----GTGGG-TTTTTGGTTAGTGGCCAAGTC 375 |||| || || || || |||||| ||| | ||| || |||| | ||| || || Sbjct 317 AAATGATTACC-CTCACTGAACTTCATGCCAAAGCGGGATTGGTGGTGAATGGAGAACTC 375 Query 376 A-AGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTGTTGGCAAGTCAGATGTG-TTAGAGG 433 | | ||||||||| || | | ||||||||||||||| || || | ||||| | | ||||| Sbjct 376 ACA-ATTGTTGCCAAGATAGATGTTCTTGAAGTTGTAGGAAAATTAGATG-GCTCAGAGG 433 Query 434 AAACTTTGTTAGTTAATGGAGGC-ATCA-ATGTCAATGGGTTTCAAGTTCTTCCTTCACA 491 || ||| | || || |||| | | | |||||||||| |||||||||||||||||||| Sbjct 434 AATCTTCATCAG-TAGTGGAAACGGT-AGATGTCAATGGCTTTCAAGTTCTTCCTTCACA 491 Query 492 GGTAGAATCTGTGAA-CAATCTCTTCAAAAATCACCCAGACATTGCATCAAACTTCCGTC 550 ||||||||| ||||| | | | || ||| ||||| ||| |||||||||| || |||| Sbjct 492 GGTAGAATCAGTGAAGCTTT-TGTTTGAAAGTCACCAAGATTTTGCATCAAAATTTCGTC 550 Query 551 TGGAA-AA-C-ACTCATCT-AAGAACTACATACTTGAATAGC-CTACTATG--CTTGACT 603 | || || | | | || | |||| | ||||| ||||| | || || || ||| || Sbjct 551 TA-AATAATCCA-T-ATATGAAGA-CGGCATACATGAAT-GTTCT-CT-TGAGCTTAACC 603 Query 604 GAG-CTTCTGTGCC-AGTCCCCTCATA-AACTCTCCAATGTTGATCTCGCCAATGCG--C 658 | | || |||| | || ||||| | |||||||||||| || |||| ||||| | Sbjct 604 CAAACG-CTATGCCGA-TCGCCTCA-AGAACTCTCCAATGATGGTCTCTTTGATGCGGGC 660 Query 659 ACTGTACTCTAACT-TGTGTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGAAAAGAAA 717 ||| ||| | | | | | ||| | |||| || |||||||||||||||||||| |||||| Sbjct 661 GCTGCACTGTCA-TAT-T-TGAGAGAAGCAGGGTTTAAGTTGGATTGGTTGGAGAAGAAA 717 Query 718 CT 719 || Sbjct 718 CT 719 > Ahg905866 jgi|Araly1|905866|Al_scaffold_0003_2994 Length=891 Score = 121 bits (65), Expect = 1e-26 Identities = 162/207 (78%), Gaps = 13/207 (6%) Strand=Plus/Plus Query 352 GGG-TTTTTGGTTAGTGGCCAAGTC-AAGATTGTTGCCGAGGTTGGTGTTCTTGAAGTTG 409 ||| ||| |||| | ||| || || ||| |||||||| || | | |||||||||||||| Sbjct 333 GGGATTTCTGGTGAATGGAGAACTCAAAG-TTGTTGCCAAGATAGATGTTCTTGAAGTTG 391 Query 410 TTGGCAAGTCAGATGTGTT-AGAGGAAACTTTGTTAGTTAATGG-AGGCATCA-ATGTCA 466 | || || | |||||| || | ||||| | || | || || ||| | | | | |||||| Sbjct 392 TAGGAAAATTAGATGT-TTCACAGGAATCGTTATCAG-TAGTGGAAACCGT-AGATGTCA 448 Query 467 ATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAA-CAATCTCTTC-AAAAATCA 524 |||||||||||||||||||||||||||||||||||||||| | | | || ||||| || Sbjct 449 ATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGCGTT-TGTTTGAAAAA-CA 506 Query 525 CCCAGACATTGCATCAAACTTCCGTCT 551 || ||| |||| |||||| || ||||| Sbjct 507 CCAAGATATTGTATCAAAGTTTCGTCT 533 > Ahg930958 jgi|Araly1|930958|scaffold_303415.1 Length=959 Score = 91.6 bits (49), Expect = 8e-18 Identities = 78/91 (86%), Gaps = 6/91 (7%) Strand=Plus/Plus Query 461 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAA-CAATCTCTTC-AA 518 ||||||||||||||||||||||||||||||||| ||||||||||| | | | ||| || Sbjct 419 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAACG-TATATTCGAA 477 Query 519 AAATCACCCAGACATTGCA-TCAAACTTCCG 548 ||| ||||||||||| ||| | ||| ||||| Sbjct 478 AAA-CACCCAGACATGGCACTAAAA-TTCCG 506 > Ahg898788 jgi|Araly1|898788|Al_scaffold_0005_2754 Length=918 Score = 86.1 bits (46), Expect = 4e-16 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 462 TGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTCAAAAA 521 ||| |||||||||||||||||||||||||||||||||||||||| | | | || |||| Sbjct 504 TGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGCCGTATTTTTGAAAA 563 Query 522 TCACCCAGACATTGCA 537 |||||||| |||||| Sbjct 564 GCACCCAGAGATTGCA 579 > Ahg898777 jgi|Araly1|898777|Al_scaffold_0005_2743 Length=957 Score = 82.4 bits (44), Expect = 5e-15 Identities = 144/189 (76%), Gaps = 19/189 (10%) Strand=Plus/Plus Query 36 GATTAAGAATTTCTCCTCTTTGCAATCTCATGCAATT-TATTTTGAT-ATTTT-TGTAGT 92 |||||||||||||||||||||||||||| | | || | |||| |||| | || || | | Sbjct 42 GATTAAGAATTTCTCCTCTTTGCAATCTGA-GAAAATATATTCTGATCAGTTCGTG-A-T 98 Query 93 TGG-GGACACCAAATGGCATCTTCTGGCCTATCCCAAGGGATATGGTGAT-AGCAT-TAA 149 || || | || ||||| ||||||||||| |||||||||| || || || | || | | Sbjct 99 TGACGG-CTGCAGATGGCGTCTTCTGGCCTTTCCCAAGGGAAATAGT-ATTAA-ATCTGA 155 Query 150 TAAATGTTTGTCTCTGTTTCTTGGTGTTCCTGA-TCCTGA-TGATTTGCCTTCTGGTTGG 207 | | | || |||||| | ||||| ||| |||| || ||| | ||| ||||| ||| ||| Sbjct 156 TCA-T-TT-GTCTCTATATCTTGAAGTTGCTGAGTC-TGAATCATT-GCCTTGTGGATGG 210 Query 208 AAAAGACAC 216 | ||||||| Sbjct 211 AGAAGACAC 219 > Ahg937123 jgi|Araly1|937123|scaffold_501314.1 Length=1048 Score = 78.7 bits (42), Expect = 6e-14 Identities = 68/80 (85%), Gaps = 4/80 (5%) Strand=Plus/Plus Query 461 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAA-CAATCTCTTCAAA 519 ||||||||||||||||||||||||||||||||| ||||| ||||| | | | ||| || Sbjct 541 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCCGTGAAACG-TATATTCGAA 599 Query 520 A-ATCACCCAGACATTGCAT 538 | | ||||||||||| |||| Sbjct 600 AGA-CACCCAGACATGGCAT 618 > Ahg480146 jgi|Araly1|480146|fgenesh2_kg.3__2847__AT2G05420.1 Length=927 Score = 76.8 bits (41), Expect = 2e-13 Identities = 93/117 (79%), Gaps = 8/117 (7%) Strand=Plus/Plus Query 380 TTGTTGCCGAGG-TTGGTGTTCTTGAAGTTGTTGGCAAGTCAGATGTGTT-AGAGGAAAC 437 |||||||| ||| | | ||||||||||||||| || || | |||||| || | ||| | | Sbjct 374 TTGTTGCC-AGGATAGATGTTCTTGAAGTTGTAGGAAAATTAGATGT-TTCACAGGTATC 431 Query 438 TTTGTTAGTTAATGG-AGGCATCA-ATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 492 || | || || ||| | | | | |||||||||||||||||||||||||||||||| Sbjct 432 TTCATCAG-TACTGGAAACCGT-AGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 486 Score = 60.2 bits (32), Expect = 2e-08 Identities = 174/239 (73%), Gaps = 24/239 (10%) Strand=Plus/Plus Query 493 GTAGAATCTGTGAA-CAATCTCTTC-AAAAATCACCCAGACATTGCATCAAACTTCCGT- 549 |||||||| ||||| | | | ||| ||||| |||| ||| ||||||||||| || ||| Sbjct 517 GTAGAATCAGTGAATC-GTTTGTTCGAAAAA-CACCTAGATATTGCATCAAAATTTCGTC 574 Query 550 C-TGGAAAACACTCATCT-AAGAACTACATACTTGAATAG-CC-TACTATGCTTGACTGA 605 | ||| || | || | ||| || | ||| ||||| | || || || |||| || | Sbjct 575 CAAAGAATCCA-T-ATATGAAG-ACGGCGTACATGAAT-GTCCTTA-TAAGCTTAACCAA 629 Query 606 G-CTTCTGTGCCAGTCCCCTCATA-AACTCTCCAATGTTGATCTCG-CCAATGC--GCAC 660 | | |||||||| || ||||| | | |||||||||| ||| | | | ||| || | Sbjct 630 GAC-GCTGTGCCAATCGCCTCA-AGATCTCTCCAATGAGGATAT-GTCTGGTGCAGGCGC 686 Query 661 TGTACTCTAACTTGTGTGACAAAAGCCGGTTTTAAGTTGGATTGGTTGGAAAAGAAACT 719 || | | | || | | ||| | |||| || ||||||||||||||||||||||||||||| Sbjct 687 TGCA-T-TGACATATTTGAGAGAAGCAGGGTTTAAGTTGGATTGGTTGGAAAAGAAACT 743 > Ahg324310 jgi|Araly1|324310|fgenesh1_pm.C_scaffold_5001854 Length=1308 Score = 76.8 bits (41), Expect = 2e-13 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 464 TCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAA-TCTGTGAACAATCTCTTC-AAAAA 521 ||||||||||||||||||||||||||||||| ||| | ||||| | | | || ||||| Sbjct 875 TCAATGGGTTTCAAGTTCTTCCTTCACAGGT-GAAATTTGTGAGCCGTATTTTTGAAAAA 933 Query 522 TCACCCAGACATTGCA 537 | |||||||||||||| Sbjct 934 T-ACCCAGACATTGCA 948 > Ahg924373 jgi|Araly1|924373|scaffold_105654.1 Length=1003 Score = 75.0 bits (40), Expect = 8e-13 Identities = 62/72 (86%), Gaps = 4/72 (6%) Strand=Plus/Plus Query 466 AATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGA-ACA-ATCTCTTCAAAAATC 523 |||||||||||||||||||||||||||| ||||||||||| || || | || ||| | | Sbjct 570 AATGGGTTTCAAGTTCTTCCTTCACAGGAAGAATCTGTGAGACGTATAT-TTGAAAGA-C 627 Query 524 ACCCAGACATTG 535 | |||||||||| Sbjct 628 ATCCAGACATTG 639 > Ahg938811 jgi|Araly1|938811|scaffold_503002.1 Length=1099 Score = 71.3 bits (38), Expect = 1e-11 Identities = 67/81 (83%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 461 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTC-AAA 519 |||||||||||||||||||||||||||||||||| | | ||||| | | | || ||| Sbjct 652 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGAGCCGTATTTTTGAAA 711 Query 520 AATCACCCAGACATTGCATCA 540 || |||||||| | ||||||| Sbjct 712 AA-CACCCAGAGACTGCATCA 731 > Ahg937127 jgi|Araly1|937127|scaffold_501318.1 Length=586 Score = 63.9 bits (34), Expect = 2e-09 Identities = 37/38 (97%), Gaps = 1/38 (3%) Strand=Plus/Plus Query 461 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAA 498 |||||||||||||||||||||||||||||||| ||||| Sbjct 532 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAG-TAGAA 568 > Ahg897254 jgi|Araly1|897254|Al_scaffold_0005_1220 Length=1629 Score = 60.2 bits (32), Expect = 2e-08 Identities = 32/32 (100%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 461 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 492 |||||||||||||||||||||||||||||||| Sbjct 1223 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30955808604 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5