BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G32230.1
Length=2582
Score E
Sequences producing significant alignments: (Bits) Value
Ahg473413 jgi|Araly1|473413|fgenesh2_kg.1__3367__AT1G32230.1 3629 0.0
Ahg907240 jgi|Araly1|907240|Al_scaffold_0002_321 473 2e-132
Ahg915414 jgi|Araly1|915414|Al_scaffold_0008_165 381 1e-104
Ahg344261 jgi|Araly1|344261|fgenesh1_pg.C_scaffold_4000603 333 4e-90
> Ahg473413 jgi|Araly1|473413|fgenesh2_kg.1__3367__AT1G32230.1
Length=2534
Score = 3629 bits (1965), Expect = 0.0
Identities = 2271/2413 (94%), Gaps = 43/2413 (2%)
Strand=Plus/Plus
Query 190 TTTTCTGGTCAGCTTTTGCTTTT----AG---ATTACCCTTGTTGCCT--GCGATCGATC 240
||||||||| ||||||||||||| || |||||||||||||||| ||||||||||
Sbjct 144 TTTTCTGGTTAGCTTTTGCTTTTACAGAGATTATTACCCTTGTTGCCTCAGCGATCGATC 203
Query 241 TGAAAAAAGAGGAACTTTATCTTGCTGACGGCTGTTATA-AAAAGAC-GTGGCATTTCTT 298
|||||||| |||||| ||||||| ||||||||||||| ||||||| ||||||||||||
Sbjct 204 TGAAAAAAAAGGAACGCCATCTTGCCGACGGCTGTTATATAAAAGACGGTGGCATTTCTT 263
Query 299 CTCTGATTGTGTTTATTTTTATGACGGAGAAGATGAACACACTTGTAATCTATCAGACTC 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 264 CTCTGATTGTGTTTATTTTTATGACGGAGAAGATGAACACACTTGTAATCTATCAGCCTC 323
Query 359 TAACTGTTACTGTTGGTGTTTTCTAATGCTGTCGGCAAGACACTATCTTTAGGACTGCTA 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 324 TAACTGTTACTGTTGGTGTTTTCTAATGCTGTCGGCAAGACACTATCTTTAGGAGTGCTA 383
Query 419 GGGAGTTTAGAGGTTACACAGTTGACTTTTTCTATCAAGGTTATAGGTTTAGTATTGTTA 478
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 384 GGGAGTTTAGAGGTTACTCAGTTGACTTTTTCTTTCAAGGTTATAGGTTTAGTATTGTTA 443
Query 479 ATATATAGAAATGGAAGCCAAGATCGTCAAGGTGTTGGATAGTAGTAGGTGTGAAGATGG 538
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 444 ATATATAGAAATGGAAGCCAAGATCGTCAAGGTGTTGG---GTAGTAGGTGTGAAGATGG 500
Query 539 ATTCGGAAAAAAGAGGAAGCGCGCAGCAAGCTATGCTGCATATGTTACTGGAGTTTCGTG 598
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 501 ATTCGGGAAGAAGAGGAAGCGCGCAGCAAGCTATGCTGCATATGTTACTGGAGTTTCGTG 560
Query 599 TGCAAAGCTGCAAAATGTGCCCCCACCGAACGGGCAGTGCCAAATTCCTGACAAAAGAAG 658
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 561 TGCAAAGCTGCAAAATGTGCCCCCACCGAACGGGCTGTGCCAAATTCCTGACAAAAGAAG 620
Query 659 AAGGCTGGAAGGTGAAAACAAGCTTAGCGCTTACGAGAATCGCTCTGGGAAGGCGCTGGT 718
|||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||
Sbjct 621 AAGGCTGGAAGGTGAAAATAAGCTTAGCGCTTATGAGAATCGCTCTGGGAAGGCACTGGT 680
Query 719 CAGATATTACACTTATTTTAAGAAGACTGGAATCGCTAAACGTGTTATGATGTATGAGAA 778
|||||| |||||||||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct 681 CAGATACTACACTTATTTTAAGAAGACGGGAATCGCTAAACGTGTTATGATCTACGAAAA 740
Query 779 TGGCGAATGGAATGATTTGCCTGAGCACGTTATATGCGCCATCCAGAATGAATTAGAAGA 838
||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||
Sbjct 741 TGGTGAATGGAATGATTTGCCTGAGCATATTATATGCGCCATCCGGAATGAATTAGATGA 800
Query 839 AAAGAGCGCCGCAATTGAGTTCAAGTTATGCGGTCACAGTTTTATTTTGGACTTCTTGCA 898
|||||| ||||||||||||||| |||| |||||||||| |||||| ||||||||||||||
Sbjct 801 AAAGAGAGCCGCAATTGAGTTCGAGTTGTGCGGTCACAATTTTATCTTGGACTTCTTGCA 860
Query 899 CATGCAAAGACTAGACATGGAAACAGGAGCAAAAACCCCTCTTGCATGGATTGACAATGC 958
|||||| ||||||||| ||| |||||| ||||||||||| || ||||||||||||| ||
Sbjct 861 CATGCATAGACTAGACTTGGGAACAGGGGCAAAAACCCCACTAGCATGGATTGACATTGG 920
Query 959 AGGAAAGTGCTTTTTCCCTGAAATTTATGAGAGTGATGAAAGGACCAATTACTGCCATCA 1018
||| ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 921 AGGCAAGTGTTTTTTCCCTGAAATTTACGAGAGTGATGAAAGGACCAATTGCTGCCATCA 980
Query 1019 TAAATGTGTGGAAGACCCAAAACAGAATGCTCCTCATGATATCAAACTTCGCCTAGAGAT 1078
||| | ||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct 981 TAACTTTGTGGAAGATCCAAAACAGAATGCTCCCCATGATATCAAACTGCGCCTTGAGAT 1040
Query 1079 TGATGTTAATGGTGGCGAGACACCGAGGTTAAATTTGGAGGAGTGCAGTGATGAGTCTGG 1138
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1041 TGACGTTAATGGTGGCGAGTCACCGAGGTTAAATTTGGAGGAGTGCAGTGATGAGTCTGG 1100
Query 1139 TGATAATATGATGGACGATGTTCCCCTTGCTCAACGATCTTCAAATGAGCACTAT---GA 1195
|||| | || ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1101 TGAT-A-AT-ATGGACGATGTTCCCCTTGCTCAACGATCTTCAAATGAGCACTATGACGA 1157
Query 1196 CGAGGCTACGGAGGATAGCTGCAGCCGCAAGCTCGAAGCTGCTGTTTCGAAATGGGATGA 1255
|||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1158 CGAGGCAACAGAGGATAGCTGCAGCCGCAAGCTTGAAGCTGCTGTTTCGAAATGGGATGA 1217
Query 1256 GACTGATGCTATAGTCGTCTCTGGTGCCAAGCTTACGGGAAGCGAAGTACTTGATAAAGA 1315
||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||
Sbjct 1218 GACTGATGCTATA---GTCTCTGGTGCCAAGCTTACTGGAACCGAAATACTTGATAAAGA 1274
Query 1316 TGCAGTaaaaaaaaTGTTTGCTGTAGGCACAGCTTCTCTAGGACATGTACCAGTGCTGGA 1375
|||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 1275 TGCAGTTAAAAAAATGTTTGCTGTAGGCACAGCTTCTCTAGGACATGTAGCAGTACTGGA 1334
Query 1376 TGTGGGCCGTTTTTCCAGTGAGATTGCTGAAGCTCGTCTAGCACTTTTCCAGAAGCAGGT 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1335 TGTGGGCCGTTTTTCCAGTGAGATTGCTGAAGCTCGTCTAGCACTTTTCCAGAAGCAGGT 1394
Query 1436 TGAGATCACTAAGAAACATCGAGGGGATGCAAACGTTAGGTATGCCTGGCTTCCTGCAAA 1495
|||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 1395 TGAGATAACTAAGAAACATCGAAGGGATGCAAACGTTAGGTATGCTTGGCTTCCTGCAAA 1454
Query 1496 GAGGGAAGTTTTATCAGCAGTGATGATGCAAGGACTTGGAGTTGGTGGAGCATTTATCAG 1555
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||
Sbjct 1455 GAGGGAAGTTTTATCAGCAGTTATGACGCAAGGACTTGGAGTTGGTGGAGCATTTATTAG 1514
Query 1556 AAAGTCCATCTATGGTGTTGGGATCCATTTAACCGCTGCAGACTGCCCTTATTTCAGTGC 1615
||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct 1515 AAAGTCCATCTATGGTGTTGGAATCCATTTAACTGCTGCAGACTGCCCTTACTTCAGTGC 1574
Query 1616 TAGATACTGTGATGTTGACGAAAACGGAGTACGTTACATGGTTTTATGCCGTGTGATTAT 1675
|||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || ||
Sbjct 1575 TAGATATTGTGATGTTGACGAAAATGGAGTTCGTTACATGGTTTTATGCCGTGTAATAAT 1634
Query 1676 GGGGAATATGGAGCTTCTTCGTGGTGATAAAGCTCAGTTCTTTTCTGGTGGAGAAGAATA 1735
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1635 GGGGAATATGGAGCTTCTTCGTGGTGATAAGGCTCAGTTCTTTTCTGGTGGAGAAGAATA 1694
Query 1736 TGACAATGGAGTCGATGACATTGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATAT 1795
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1695 TGACAATGGAGTCGATGATATCGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATAT 1754
Query 1796 GAACACACATATATTCCCGGAATTTGTTGTTAGGTTCAAGCTGTCTAATCTCCCCAATGC 1855
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1755 GAACACCCATATATTCCCGGAATTCGTTGTTAGGTTCAAGCTGTCTAATCTCCCCAATGC 1814
Query 1856 TGAAGGTAATTTGATTGCTAAGCGTGATAACTCAGGGGTCACTTTGGAAGGACCTAAGGA 1915
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1815 TGAAGGTAATTTGATTGCTAAGCGTGATAACTCAGGGGTCACTTTGGAAGGACCTAAGAA 1874
Query 1916 TCTTCCTCCTCAATTGGAGTCAAACCAGGGAGCAAGAGGTTCAGGAAGTGCAAACAGTGT 1975
|||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 1875 TCTTCCTCGTCAGTTGGAGTCAAACCATGGAGCAGGAGGTTCAGGAAGTGCAAACAGTGT 1934
Query 1976 TGGTTCAAGCACTACAAGACCCAAATCTCCATGGATGCCATTTCCTACTCTGTTTGCAGC 2035
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1935 TGGTTCAAGCACTACAAGACCCAAATCTCCATGGATGCCTTTTCCTACTCTGTTTGCAGC 1994
Query 2036 AATCTCACATAAGGTTGCAGAGAACGACATGTTGTTGATCAATGCTGACTACCAACAACT 2095
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1995 AATCTCACATAAGGTTGCAGAGAACGACATGTCGTTGATCAATGCTGACTACCAACAACT 2054
Query 2096 GAGGGATAAGAAGATGACGAGAGCGGAGTTTGTCAGGAAACTGCGGGTGATTGTAGGAGA 2155
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 2055 GAGGGATAAGAAGATGACGAGAGCAGAGTTTGTGAGGAAACTGCGGGTGATTGTAGGAGA 2114
Query 2156 TGATCTGCTAAGGTCCACCATAACAACCCTTCAAAACCAGCCAAAGTCGAAGGAGATTCC 2215
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2115 TGATCTGCTAAGGTCCACCATAACAACGCTTCAAAACCAGCCAAAGTCGAAGGAGATTCC 2174
Query 2216 AGGAAGCATCAGAGACCATGAAGAAGGTGCAGGTGGATTGTAAGTAAAGTGGATGATGAT 2275
|||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||
Sbjct 2175 AGGAAGCATCAGAGACCATGAAGAAGGTGCAGGTGGGTTGTT-GTAA-G---ATGATGAT 2229
Query 2276 GATGACGAATATCAAAAGGAAGCTGCTTTTTATCTATCTACCTGCCTTT-GTGGTTCTCC 2334
|| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||||
Sbjct 2230 GA---CGAATATCAAAAGGAAGCTGCTTTCTATCTATCTACCCGCCTTTTGTGGTTCTCC 2286
Query 2335 TTTTGACTTTTTCTAATTTTAGACTTTTGGTTTTGGGTCGGGTCGTTGGTAGAGTTTAAA 2394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2287 TTTTGACTTTTTCTAATTTTAGACTTTTGGTTTTGGGTCGGGTCGTTGGTAGAGTTTAAA 2346
Query 2395 ATGTGTCGACTTTTCTTTCTGTCGTGAAAAATCGTACTATATTATA-T--GATTCTACTT 2451
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 2347 -TGTGTCGACTTTTCTTTCTGTCGTGAAAAATCGTACTATATTATACTATGATTCTACTT 2405
Query 2452 A---GTCAATGATGTCGTTGGGTCTTTGTTTCTTTAGCTGCAAGCAAAACATTGTTGTGG 2508
| ||||||||||||| ||||||||||||| ||||||||||| || |||||||||||
Sbjct 2406 ATTAGTCAATGATGTCGCTGGGTCTTTGTTTTTTTAGCTGCAA--AA--CATTGTTGTGG 2461
Query 2509 AAGTCGTTGAATCTTGACGAAAATTTGGTCGTTAAGCCTATCGCGTGAAACTTTTCTTCA 2568
||||||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||
Sbjct 2462 AAGTCGTTGAATCTTGACGAAAATTTGGTCGTTGAGTCTATAGCGTGAAACTTCTCTTCA 2521
Query 2569 CTATACTTTTTCT 2581
|||||||||||||
Sbjct 2522 CTATACTTTTTCT 2534
Score = 169 bits (91), Expect = 1e-40
Identities = 139/159 (87%), Gaps = 16/159 (10%)
Strand=Plus/Plus
Query 1 AAGCAAATTTTTGGTTAGAGAAAGAGGaaaaaaaCTCAGGAACCGCCGACTTAAGAATTT 60
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 1 AAGCAAATTTTTGGTAAGAGAAAGAGG--AAAAACTCAGGAACCGCCGACTTAAGAGTTT 58
Query 61 CTTCTTCATCATCTCTCCAATATCGCCGATTATATATAAATGACTCTTC------GATTC 114
|||| ||| || | || |||||||||||||||||||||||||||| |||||
Sbjct 59 CTTC---ATC-TC-CA--AA-ATCGCCGATTATATATAAATGACTCTTCTTCTTCGATTC 110
Query 115 TGTTTCTTCTTCGTCGTCATCGCCGGCTTAGGGTTTTCT 153
||||||||||||||||||||||||||||||||||||||
Sbjct 111 AGTTTCTTCTTCGTCGTCATCGCCGGCTTAGGGTTTTCT 149
> Ahg907240 jgi|Araly1|907240|Al_scaffold_0002_321
Length=3522
Score = 473 bits (256), Expect = 2e-132
Identities = 318/348 (91%), Gaps = 3/348 (1%)
Strand=Plus/Plus
Query 1538 TGGTGGAGCATTTATCAGAAAGTCCATCTATGGTGTTGGGATCCATTTAACCGCTGCAGA 1597
||||||||||||||| ||| |||||||||||||||||||||| ||||||| | |||| |
Sbjct 684 TGGTGGAGCATTTATTAGAGAGTCCATCTATGGTGTTGGGATTTATTTAACTGTTGCAAA 743
Query 1598 CTGCCCTTATTTCAGTGCTAGATACTGTGATGTTGACGAAAACGGAGTACGTTACATGGT 1657
|||| |||| |||||||||||||| ||||||| |||| |||||||||| |||||||||||
Sbjct 744 CTGCTCTTACTTCAGTGCTAGATATTGTGATGGTGACAAAAACGGAGTTCGTTACATGGT 803
Query 1658 TTTATGCCGTGTGATTATGGGGAATATGGAGCTTCTTCGTGGTGATAAAGCTCAGTTCTT 1717
|||||| | ||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 804 TTTATGTCATGTAATAATGGGGAATATGGAGCTTCTTCGTGGTGATAAAGCTCAATTCTT 863
Query 1718 TTCTGGTGGAGAAGAATATGACAAT-G-G-AGTCGATGACATTGAGAGTCCAAAGAATTA 1774
|| |||||||||||||||||||||| | | ||||||||| || |||||||||||||||||
Sbjct 864 TTATGGTGGAGAAGAATATGACAATGGAGTAGTCGATGATATCGAGAGTCCAAAGAATTA 923
Query 1775 CATTGTCTGGAACATCAATATGAACACACATATATTCCCGGAATTTGTTGTTAGGTTCAA 1834
||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct 924 CATTGTCTGGAACATCAATATGAACACTCATATATTCCCCGAATTTGTTTTTAGGTTCAA 983
Query 1835 GCTGTCTAATCTCCCCAATGCTGAAGGTAATTTGATTGCTAAGCGTGA 1882
||||||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct 984 GCTGTCTAATCTCTCCAATACTGGAGGTAATTTGATTGCTAAGCGTGA 1031
> Ahg915414 jgi|Araly1|915414|Al_scaffold_0008_165
Length=573
Score = 381 bits (206), Expect = 1e-104
Identities = 242/260 (93%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 1623 TGTGATGTTGACGAAAACGGAGTACGTTACATGGTTTTATGCCGTGTGATTATGGGGAAT 1682
||||||| |||| |||||||||| ||||||||||||||||| ||||| || |||||||||
Sbjct 154 TGTGATGGTGACAAAAACGGAGTTCGTTACATGGTTTTATGTCGTGTAATAATGGGGAAT 213
Query 1683 ATGGAGCTTCTTCGTGGTGATAAAGCTCAGTTCTTTTCTGGTGGAGAAGAATATGACAAT 1742
|||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 214 ATGGAGCTCCTTCGTGGTGATAAAGCTCAATTCTTTTATGGTGGAGAAGAATATGACAAT 273
Query 1743 GGAGTCGATGACATTGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATATGAACACA 1802
||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 274 GGAGTCGATGATATCGAGAGTCCAAAGAATTACATTGTCTGGAACGTCAATATGAACACT 333
Query 1803 CATATATTCCCGGAATTTGTTGTTAGGTTCAAGCTGTCTAATCTCCCCAATGCTGAAGGT 1862
||||||||||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||
Sbjct 334 CATATATTCCCCGAATTTGTTCTTATGTTCAAGCTGTCTAATCTCTCCAATACTGAAGGT 393
Query 1863 AATTTGATTGCTAAGCGTGA 1882
||||||||||||||||||||
Sbjct 394 AATTTGATTGCTAAGCGTGA 413
Score = 178 bits (96), Expect = 2e-43
Identities = 110/117 (94%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1538 TGGTGGAGCATTTATCAGAAAGTCCATCTATGGTGTTGGGATCCATTTAACCGCTGCAGA 1597
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 33 TGGTGGAGCATTTATTAGAAAGTCCATCTATGGTGTTGGGATCCATTTAACTGCTGCAGA 92
Query 1598 CTGCCCTTATTTCAGTGCTAGATACTGTGATGTTGACGAAAACGGAGTACGTTACAT 1654
||||||||| |||||||||||||| |||||||||||| ||||| ||| |||||||||
Sbjct 93 CTGCCCTTACTTCAGTGCTAGATATTGTGATGTTGACAAAAACAGAGCACGTTACAT 149
> Ahg344261 jgi|Araly1|344261|fgenesh1_pg.C_scaffold_4000603
Length=1137
Score = 333 bits (180), Expect = 4e-90
Identities = 222/242 (92%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 1623 TGTGATGTTGACGAAAACGGAGTACGTTACATGGTTTTATGCCGTGTGATTATGGGGAAT 1682
||||||| |||| |||||||||| ||||||||||||||||| | ||| || |||||||||
Sbjct 817 TGTGATGGTGACAAAAACGGAGTTCGTTACATGGTTTTATGTCATGTAATAATGGGGAAT 876
Query 1683 ATGGAGCTTCTTCGTGGTGATAAAGCTCAGTTCTTTTCTGGTGGAGAAGAATATGACAAT 1742
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 877 ATGGAGCTTCTTCGTGGTGATAAAGCTCAATTCTTTTATGGTGGAGAAGAATATGACAAT 936
Query 1743 -G-G-AGTCGATGACATTGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATATGAAC 1799
| | ||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 937 GGAGTAGTCGATGATATCGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATATGAAC 996
Query 1800 ACACATATATTCCCGGAATTTGTTGTTAGGTTCAAGCTGTCTAATCTCCCCAATGCTGAA 1859
|| ||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||| |
Sbjct 997 ACTCATATATTCCCCGAATTTGTTTTTAGGTTCAAGCTGTCTAATCTCTCCAATACTGGA 1056
Query 1860 GG 1861
||
Sbjct 1057 GG 1058
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97358666220
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5