BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G32300.1 Length=1788 Score E Sequences producing significant alignments: (Bits) Value Ahg313803 jgi|Araly1|313803|fgenesh1_pm.C_scaffold_1002583 2658 0.0 Ahg917344 jgi|Araly1|917344|Al_scaffold_0008_2095 1882 0.0 Ahg322327 jgi|Araly1|322327|fgenesh1_pm.C_scaffold_4002384 1033 0.0 Ahg887421 jgi|Araly1|887421|Al_scaffold_0994_1 209 5e-53 Ahg935659 jgi|Araly1|935659|scaffold_403647.1 167 3e-40 > Ahg313803 jgi|Araly1|313803|fgenesh1_pm.C_scaffold_1002583 Length=1911 Score = 2658 bits (1439), Expect = 0.0 Identities = 1612/1696 (95%), Gaps = 9/1696 (1%) Strand=Plus/Plus Query 1 ATGGCATTTTGGTTAAGTTTGATATTTTTC---TGCTTTTGCACATTTGCATCCTCAACT 57 |||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| Sbjct 1 ATGGCATTTTGGTTAAGTTTGATATTTTTCTTTTGCTTTTTCACATTTGCTTCCTCAACT 60 Query 58 CCACCGGATGATCCGGTCAAGTGTGAGTCAGGAAACAACATGTGCACTGTGACGAACTCG 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CCACCGGATGATCCGGTCAAGTGTGAGTCAGGAAACAACATGTGCACTGTGACGAACTCG 120 Query 118 TACGGAGCCTTCCCCGACCGTTCTATATGTGAAGCGGCAAAGGTGGAGTACCCCAAGACC 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 121 TACGGAGCCTTCCCCGACCGTTCTATATGTGAAGCGGCAAAGGTGGAGTACCCTAAGACC 180 Query 178 GAGGCTGAGTTAGTCTCTATAGTGGCTGCAGCCACTAGAGCCGGCCAAAAAGTGCGGGTT 237 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 181 GAGGCTGAGTTAGTCTCTATAGTGGCTGCAGCCACTAGAGCCGGCCAAAAAATGCGGGTC 240 Query 238 GTGACTCGGTACGT-TCACAGCATCCCAAAGCTCGTTTGTACTGATGGAAAGGACGGTGT 296 |||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||| || Sbjct 241 GTGACTCGGTAC-TCTCACAGCATCCCAAAGCTCGTTTGCACTGACGGAAAGGACGGGGT 299 Query 297 TCTCATAAGCACCAAGTTTTTAAACAACGTGGTGGGAACCAATCCCGAAGCCAAGACTTT 356 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 300 TCTCATAAGCACCAAGTTTTTAAACAACGTGGTGGGAACCAACCCCGAAGCCAAGACTTT 359 Query 357 GACAGTTGAGAGCGGTGTGACGTTAAGGCAGCTTATCGGAGAAGCGGCTGAATTGGAGCT 416 ||||||||||||||| |||||| |||||||||| ||||||||||| ||||| |||||||| Sbjct 360 GACAGTTGAGAGCGGCGTGACGCTAAGGCAGCTGATCGGAGAAGCCGCTGAGTTGGAGCT 419 Query 417 GGCTTTGCCACACGCACCATATTGGTGGGGACTCACGGTTGGAGGATTGATGGGGACAGG 476 ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 420 CGCTTTACCATACGCACCGTATTGGTGGGGACTCACGGTTGGAGGATTGATGGGGACGGG 479 Query 477 TGCTCATGGAAGTTCGTTGTGGGGTAAAGGAAGTGCGGTTCATGATTATGTGAGTGAGAT 536 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 480 TGCTCACGGAAGCTCGTTGTGGGGTAAAGGAAGTGCGGTTCATGATTATGTGAGCGAGAT 539 Query 537 AAGAATGGTGAGTCCCGGTTTGGCTTCTGATGGGTATGTTAAGGTTCGGGTTCTTAGCGA 596 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 540 AAGAATGGTGAGTCCCGGTTTGGCTTCTGATGGGTATGTAAAGGTTCGGGTTCTTAGCGA 599 Query 597 GACAATAGATCCTGATGAATTTCGTGCAGCCAAAGTTTCTCTAGGCGTTCTAGGTGTTAT 656 ||| || ||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 600 GACTATGGATCCTGATGAATTTTGTGCGGCCAAAGTTTCTCTAGGCGTTCTAGGTGTTAT 659 Query 657 CTCTCAAGTAACTTTCCAGTTGCAACCAATGTTCAAGAGATCGTTAACCTTTGTTATGCA 716 ||||||||||||||||||||||||||| ||||||||||||||||| || | ||||||||| Sbjct 660 CTCTCAAGTAACTTTCCAGTTGCAACCGATGTTCAAGAGATCGTTGACGTATGTTATGCA 719 Query 717 AAACGATTCGGATTTCGGAGATCAAGCCGTGACTTTCGGGGAAAAACATGAGTTTGCAGA 776 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 720 AAACGATTCGGATTTCGGAGATCAAGCCGTGACTTTTGGGGAAAAACATGAGTTTGCAGA 779 Query 777 TTTCTTATGGTTACCAAGCCAAGGCAAAGTGGTGTATCGAATGGACGACCGAGTTCCGGT 836 ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | Sbjct 780 TTTCTTATGGTTACCGAGCCAAGGCAAGGTGGTGTATCGAATGGACGACCGAGTTCCTCT 839 Query 837 CAACACTTCAGGCAATGGCTTGTTCGACTTTTTCCCATTCCGTCCACAACTCTCTGTAGC 896 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 CAACACTTCAGGCAATGGCTTGTTCGACTTTTTCCCATTCCGTCCACAACTCTCTGTAGC 899 Query 897 GTTAGCCATCATTAGATCCTTAGAGGAGAGTGAAGAGTCATCCGGAGATGCAAACGACAA 956 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 900 GTTAGCCATCATTAGATCCTTAGAGGAGAGTGAAGAGTCATCCGGAGATGCAAACAAGAA 959 Query 957 GTGTGCGAGAGCAGAGCAAATAACGTCGTTTTTGTTTTCCATCTCCTACGGTGTGACTAA 1016 ||||| ||||||||||||| || |||||||||||||||| ||||| |||||||||||||| Sbjct 960 GTGTGTGAGAGCAGAGCAATTATCGTCGTTTTTGTTTTCAATCTCATACGGTGTGACTAA 1019 Query 1017 CAATGGTATGGAATTCACAGGCTATCCGGTGATCGGAAAGCAAAACCATATGATGTCGTC 1076 |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 1020 CAATGGTATGGAATTCACAGGCTATCCGGTAATCGGAAAGCAAAACCGTATGATGTCGTC 1079 Query 1077 GGGTACATGTCTAGACAGCCATCAGGACGGACTGATCACGTCTTGTCCTTGGGATCCACG 1136 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| Sbjct 1080 GGGTACATGTCTAGACAGCCATTGGGACGGACTGATCACTTCTTGTCCGTGGGATCCACG 1139 Query 1137 GATAAAAGGCCAATTCTTTCACCAAACAGCATTCAGTATCCCTCTCACACGTGTCAAAGG 1196 ||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct 1140 GATAAAAGGCCAATTCTTTCACCAAACAGCATTCAGTGTTCCACTCACACGTGTCAAAGG 1199 Query 1197 TTTCATCAACGACATCAAAGCACTCGTAAAGATTGAACCGAAATCTCTCTGCGCCCTTGA 1256 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct 1200 TTTCATCGACGACATCAAAGCACTCGTAAAGATTGAACCGAAAGCTCTCTGCGTCCTTGA 1259 Query 1257 ACGCAGCAATGGTATCCTCATCCGTTATGTGACATCCTCTCCTGCTTTTCTTGGGAAAGA 1316 ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1260 ACGCAGCAATGGTATTCTCATCCGTTATGTCACATCCTCTCCTGCTTTTCTTGGGAAAGA 1319 Query 1317 AGAAAAAGCTTTAGATTTTGACCTAACTTACTACCGAAGCAAAGATGATCCCTT-AGCAC 1375 |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||| Sbjct 1320 GGAAAAAGCTTTAGACTTTGACCTAACTTACTACCGAAGCAAAGATGATCCCTTGA-CAC 1378 Query 1376 CACGTCTCTACGAGGATTTCATCGAAGAGATCGAACAAATGGCGATATTTAAATACAATG 1435 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 1379 CGCGTCTCTACGAGGATTTCATCGAAGAAATCGAACAAATGGCGATATTTAAATACAACG 1438 Query 1436 CATTGCCACATTGGGGGAAGAATAGGAACCTAGCGTTTGATGGCGTGATTAGAAAGTACA 1495 | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 1439 CGCTGCCACATTGGGGGAAGAATAGGAACCTAGCTTTTGATGGCGCGATTAGAAAGTACA 1498 Query 1496 AGAACGCAAACACGTTTTTGAAAGTAAAAGAGAGATTTGATCCTTTAGGGTTGTTTTCGA 1555 ||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct 1499 AGAACGCAAACGCGTTTTTGAAAGTAAAAGAGAGATTTGATCCATTAGGGCTGTTTTCGA 1558 Query 1556 CGGAATGGACCAACCAAATTCTAGGTTTAAAAGGAAACGTGACGATTGTGAAAGAAGGAT 1615 | ||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1559 CAGAATGGACCGATCAAATTCTAGGTTTAAAAGGAAACGTTACGATTGTGAAAGAAGGAT 1618 Query 1616 GTGC-CTTGGAAGGACTTTGTGTTTGTTCGGATGATGCTCATTGTGCTCCCAAGAAAGGT 1674 |||| |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 1619 GTGCACTTG-AAGGACTGTGTGTTTGTTCGGATGATGCTCATTGTGCTCCCAACAAAGGT 1677 Query 1675 TATTTGTGTCGACCAG 1690 |||||||||||||||| Sbjct 1678 TATTTGTGTCGACCAG 1693 > Ahg917344 jgi|Araly1|917344|Al_scaffold_0008_2095 Length=1737 Score = 1882 bits (1019), Expect = 0.0 Identities = 1511/1747 (86%), Gaps = 39/1747 (2%) Strand=Plus/Plus Query 1 ATGGCATTTTGGTTAAGTTTGATATTTTTCTGCTTTTGCACATTTGCATCCTCAACTCCA 60 ||||| |||||| | |||||| || ||| || |||| ||||||||| ||||| ||||| Sbjct 1 ATGGCTTTTTGGCTCAGTTTG--ATCTTT-TGTTTTTTCACATTTGCTTCCTCGACTCCT 57 Query 61 CCGGATGATCCGGTCAAGTGTGAGTCAGGAAACAACA-TGTGCACTGTGACGAACTCGTA 119 || ||||||| |||||||| ||||| |||||| ||| | ||||| |||||||||||||| Sbjct 58 CCCCATGATCCTGTCAAGTGCGAGTCCGGAAAC-ACAGTATGCACGGTGACGAACTCGTA 116 Query 120 CGGAGCCTTCCCCGACCGTTCTATATGTGAAGCGGCAAAGGTGGAGTACCCCAAGACCGA 179 ||||||||| |||||||||||| |||||||||| ||||||||||||||||| |||||||| Sbjct 117 CGGAGCCTTTCCCGACCGTTCTTTATGTGAAGCAGCAAAGGTGGAGTACCCAAAGACCGA 176 Query 180 GGCTGAGTTAGTCTCTATAGTGGCTGCAGCCACTAGAGCCGGCCAAAAAGTGCGGGTTGT 239 ||||||| | |||||| | || |||||||| |||| |||||| |||||| ||||||| || Sbjct 177 GGCTGAGCTGGTCTCTGTGGTTGCTGCAGCAACTAAAGCCGGTCAAAAAATGCGGGTCGT 236 Query 240 GACTCGGTACGT-TCACAGCATCCCAAAGCTCGTTTGTACTGATGG-AAAGGACGGTG-T 296 |||||||||| | ||| |||||||||||| | ||||| |||||||| ||| ||||| | | Sbjct 237 GACTCGGTAC-TCTCATAGCATCCCAAAGTTGGTTTGCACTGATGGCAAA-GACGG-GAT 293 Query 297 TCTCATAAGCACCAAGTTTTTAAACAACGTGGTGGGAACCAATCCC-GAAGCCAAGACTT 355 ||||||||||||||||||| || || |||||||| ||||||| ||| || |||||||||| Sbjct 294 TCTCATAAGCACCAAGTTTCTAGACCACGTGGTGCGAACCAA-CCCGGATGCCAAGACTT 352 Query 356 TGACAGTTGAGAGCGGTGTGACGTTAAGGCAGCTT-ATCGGAGAAGCGGCTGAA-TTGGA 413 |||| ||||||||||| |||||| |||||||| || |||| |||||||||| || ||||| Sbjct 353 TGACGGTTGAGAGCGGCGTGACGCTAAGGCAG-TTGATCGAAGAAGCGGCT-AAGTTGGA 410 Query 414 GCTGGCTTTGCCACACGCACCATATTGGTGGGGACTCACGGTTGGAGGATTGATGGGGAC 473 ||| ||||||||| ||||||| |||||||||||||| || ||||||||| |||||||||| Sbjct 411 GCTAGCTTTGCCATACGCACCTTATTGGTGGGGACTTACTGTTGGAGGAATGATGGGGAC 470 Query 474 AGGTGCTCATGGAAGTTCGTTGTGGGGTAAAGGAAGTGCGGTTCATGATTATGTGAGTGA 533 ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| || Sbjct 471 AGGTGCTCACGGAAGTTCATTGTGGGGTAAAGGAAGTGCGGTTCATGATTACGTGACCGA 530 Query 534 GATAAGAATGGTGAGTCCCGGTTTGGCTTCTGATGGGTATGTTAAGGTTCGGGTTCTTAG 593 ||||||||||||||||||||||| || |||||| |||||||| || ||||||| |||||| Sbjct 531 GATAAGAATGGTGAGTCCCGGTTCGGTTTCTGAAGGGTATGTGAAAGTTCGGGATCTTAG 590 Query 594 CGAGACAATAG-ATCCTGATGAATTTCGTGCAGCCAAAGTTTCTCTAGGCGTTCTAGGTG 652 ||| || | ||||||| |||||| |||||||||||||||| |||||||||| |||| Sbjct 591 TGAGGTTAT-GAATCCTGAAGAATTTAATGCAGCCAAAGTTTCTTTAGGCGTTCTTGGTG 649 Query 653 TTATCTCTCAAGTAACTTTCCAGTTGCAACCAATGTTCAAGAGATCGTTAACCTTTGTTA 712 |||||||||| ||||||||| || ||||||| |||||||||||||||||||| | || | Sbjct 650 TTATCTCTCAGGTAACTTTCAAGCTGCAACCGATGTTCAAGAGATCGTTAACGTATGAGA 709 Query 713 TGCAAAACGATTCGGATTTCGGAGATCAAGCCGTGACTTTCGGGGAAAAACATGAGTTTG 772 || |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 710 TGAAAAATGATACGGATTTCGGAGATCAAGCCGTGACTTTCGGGGAAAAACATGAGTTTG 769 Query 773 CAGATTTCTTATGGTTACCAAGCCAAGGCAAAGTGGTGTATCGAATGGACGACCGAGTTC 832 | |||||| ||||||||||||||||||||||||||||||||||||| || || || |||| Sbjct 770 CGGATTTCCTATGGTTACCAAGCCAAGGCAAAGTGGTGTATCGAATTGATGATCGCGTTC 829 Query 833 CGGTCAACACTTCAGGCAATGGCTTGTTCGACTTTTTCCCATTCCGTCCACAACTCTCTG 892 | | |||| ||||||||||||||||||| | ||||||||||||||| |||||||||||| Sbjct 830 CTGCCAACGTTTCAGGCAATGGCTTGTTCAATTTTTTCCCATTCCGTTCACAACTCTCTG 889 Query 893 TAGC-GTTAGCCATCATTAGATCCTTAGAGGAGAGTGAAGAGTCATCCGGAGATGCAAAC 951 | || || |||||||| |||||| ||||||||| ||| ||||| || || || |||||| Sbjct 890 TGGCTGT-AGCCATCAGCAGATCCATAGAGGAGAATGAGGAGTCGTCGGGTGAGGCAAAC 948 Query 952 GACAAGTGTGCGAGAGCAGAGCAAATAACGTCGTTTTTGTTT-TCCATCTCCTACGGTGT 1010 | ||||||| ||||||| ||| | || | || ||||||||| || ||||| |||||||| Sbjct 949 AAGAAGTGTGTGAGAGCAAAGCGACTAGCATCATTTTTGTTTGTC-ATCTCATACGGTGT 1007 Query 1011 GACTAACAATGGTATGGA-ATTCACAGGCTATCCGGTGATCGGAAAGCAAA-ACC-ATAT 1067 ||| || ||||| | | ||||||||||||||| || ||||||| || || ||| | || Sbjct 1008 GACCAATAATGGCGTT-ATATTCACAGGCTATCCCGTTATCGGAA-GCCAAGACCGA-AT 1064 Query 1068 GATGTCGTCGGGTACATGTCTAGACAGCCATCAGGA-CGGACTGATCACGTCTTGTCCTT 1126 ||||||||| ||| ||||||||||||| |||| ||| |||| |||| || |||||||||| Sbjct 1065 GATGTCGTCCGGTGCATGTCTAGACAGTCATC-GGAACGGATTGATTACATCTTGTCCTT 1123 Query 1127 GGGATCCACGGATAAAAGGCCAATTCTTTC-ACCAAACAGCATTCAGTATCCCTCTCACA 1185 |||||||||| || | |||| | || |||| ||||||||||||| ||| | ||||||||| Sbjct 1124 GGGATCCACGCATTAGAGGCGAGTT-TTTCTACCAAACAGCATTAAGTGTTCCTCTCACA 1182 Query 1186 CGTGTCAAAGGTTTCATCAACGACATCAAAGCACTCGTAAAGATTGAACCGAAATCTCTC 1245 | |||||||| |||||||||||||||||||||||| || ||||||||||| ||||||||| Sbjct 1183 CATGTCAAAGATTTCATCAACGACATCAAAGCACTTGTGAAGATTGAACCAAAATCTCTC 1242 Query 1246 TGCGCCCTTGAACGCAGCAATGGTATCCTCATCCGTTATGTGACATCCTCTCCTGCTTTT 1305 |||| |||||||| || | ||||| | || ||||||||||| |||||||||||||||| | Sbjct 1243 TGCGGCCTTGAACTCAACTATGGTGTTCTAATCCGTTATGTCACATCCTCTCCTGCTTAT 1302 Query 1306 CTTGGGAAAGAAGAAAAA-GCTTTAGATTTTGACCTAACTTACTACCGAAGCAAAGATGA 1364 || ||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||| Sbjct 1303 CTAGGGAAAGAAGAAAAAAG-TTTAGACTTTGACCTAACTTACTACAGAAGCAAAGATGA 1361 Query 1365 TCCCTT-AGCACCACGTCTCTACGAGGATTTCATCGAAGAGATCGAACAAATGGCGATAT 1423 ||| || | ||||||||||||||||||||| ||| ||||||||||| |||||||| ||| Sbjct 1362 TCCTTTGA-CACCACGTCTCTACGAGGATTACATGGAAGAGATCGAGCAAATGGCAATAC 1420 Query 1424 TTAAATACAATGCATTGCCACATTGGGGGAAGAATAGGAACCTAGCGTTTGATGGCGTGA 1483 | |||||||| || ||||| ||||||||||| || ||||||||||| |||||||| | | Sbjct 1421 TGAAATACAACGCGTTGCCTCATTGGGGGAAAAACAGGAACCTAGCATTTGATGGTGCCA 1480 Query 1484 TTAGAAAGTACAAGAACGCAAACACGTTTTTGAAAGTAAAAGAGAGATTTGATCCTTTAG 1543 ||||||| ||||||||||||||| ||||||||||||| || || ||||| ||||| | Sbjct 1481 TTAGAAATTACAAGAACGCAAACGCGTTTTTGAAAGTCAAGGATAGATTAGATCCGTCCC 1540 Query 1544 GGTTGTTTTCGACGGAATGGACCAACCAAATTCTAGGTTTAAAAGGAAACGTGACGATTG 1603 | |||||||| || ||||||||| | || ||||||||||||||||||||||||||||||| Sbjct 1541 GATTGTTTTCTACAGAATGGACCGATCAGATTCTAGGTTTAAAAGGAAACGTGACGATTG 1600 Query 1604 TGAAAGAAGGATGTGCCTTGGAAGGACTTTGTGTTTGTTCGGATGATGCTCATTGTGCTC 1663 ||||| |||||||||| |||||||| |||||| |||||||||| ||| |||||||||||| Sbjct 1601 TGAAACAAGGATGTGCATTGGAAGGGCTTTGTATTTGTTCGGAGGATTCTCATTGTGCTC 1660 Query 1664 CCAAGAAAGGTTATTTGTGTCGACCAGGTAAAGTTTATACA-AAGGCTAGAGTTTGTACT 1722 | || ||||||||| |||||||||| ||||||||||||| | ||| |||| ||||||||| Sbjct 1661 CAAACAAAGGTTATATGTGTCGACCTGGTAAAGTTTATAGAGAAG-CTAGGGTTTGTACT 1719 Query 1723 CATGTAA 1729 | ||||| Sbjct 1720 CTTGTAA 1726 > Ahg322327 jgi|Araly1|322327|fgenesh1_pm.C_scaffold_4002384 Length=1812 Score = 1033 bits (559), Expect = 0.0 Identities = 1344/1714 (78%), Gaps = 89/1714 (5%) Strand=Plus/Plus Query 51 CTCAACTCCACCGGATGATCCGGTCAAGTGTGAGTCAGGAAACAAC-ATGTGCACTGTGA 109 |||||| ||||| || ||||| ||||| |||| ||| |||||| || | || || || | Sbjct 102 CTCAACACCACCCGAAGATCCTGTCAAATGTGTGTCGGGAAAC-ACGAACTGTACAGTCA 160 Query 110 CGAACTCGTACGGAGCCTTCCCCGACCGTTCTATATGT-GAAGCGGCAAAGGTGG-AGTA 167 | ||||| || |||| ||| || |||||||| | ||| | ||| || || |||| | || Sbjct 161 CAAACTCATATGGAGTCTTTCCAGACCGTTCCACGTGTCG-AGCCGCCAATGTGGCA-TA 218 Query 168 CCCCAA-GACCGAGGCTGAG-TTAGTCTCTATAGTGGCTGCAGCCACTAGAGCC-GGCCA 224 ||||| ||||| || ||| ||| ||||| | |||||||||||||||| |||| ||| Sbjct 219 -CCCAACAACCGAAGCCGAGCTTA-TCTCTGTCGTGGCTGCAGCCACTAAAGCCGGGCGG 276 Query 225 AAAAGTGCGGGT-TGTGACTCGGTACGTT--CACAGCATCCCAAAGCTCGTTTGTACTGA 281 |||| |||| || | ||||| || || || |||||| | ||||| || ||||| || Sbjct 277 AAAA-TGCGTGTAACT-ACTCGATA--TTCCCATAGCATCACTAAGCTTGTGTGTACGGA 332 Query 282 TGGAAAGGACGGTGTT-CTCATAAGCACCAAGTTTTTAAACAACGTGGTGGGAACCAATC 340 || | |||||| || |||||||| || |||||| ||||| || |||| || || || Sbjct 333 CGGGACCGACGGT-TTGCTCATAAGTACAAAGTTTCTAAACCACACGGTGCGAGCCGAT- 390 Query 341 CCGAA-GCCAAGACTTTGACAGTTGAGAGCGGTGTGACG-TTAAGGCAGCTT-ATCGGAG 397 |||| |||| ||| ||||| |||||||| || ||||| || ||||| || |||| | Sbjct 391 GCGAAGGCCATGACCTTGACGGTTGAGAGTGGCATGACGCTT-AGGCA-ATTAATCGCTG 448 Query 398 AAGCGGCTG-AATTGGAGCTGGCTTTGCCACACGCACCATATTGGTGGGGACTCACGGTT 456 ||||||||| ||||||| |||| ||||| | ||||| |||||||||||||| || || Sbjct 449 AAGCGGCTGAAATTGGA-ATGGCGTTGCCTTATGCACCGTATTGGTGGGGACTAACCGTG 507 Query 457 GGAGGAT-TGATGGGGACAGGTGCTCATGGAAGTTCGTTGTGGGGTAAAGGAAGTGCGGT 515 || || | |||||||||| |||||||| || || || ||||||||||||||||||||||| Sbjct 508 GGTGG-TATGATGGGGACCGGTGCTCACGGGAGCTCATTGTGGGGTAAAGGAAGTGCGGT 566 Query 516 TCATGATTATGTGAGTGAGATAAGAATGGTGAGTCCCGGTTTGG-CTTCTGATGGGTATG 574 ||||||||||||| ||||| || ||||| ||||| |||| || | | ||| |||| || Sbjct 567 CCATGATTATGTGACCGAGATCAGGATGGTTAGTCCTGGTTCGGTCAT-TGACGGGTTTG 625 Query 575 TTAAGGTTCGGGTTCTT-AGCGAGACAAT-AGA-TCCTGATGAATTTCGTGCAGCCAAAG 631 |||||| | ||| || |||||||| | ||| |||| |||| ||| || || || | Sbjct 626 CAAAGGTTAGAGTT-TTAAGCGAGAC--TGAGACTCCTAATGAGTTTAACGCGGCTAAGG 682 Query 632 TTTCTCTAGGCGTTCTAGGTGTTATCTCTCAAGTAACTTTCCAGTTGCAACCAATGTTCA 691 ||||||| |||||||| || ||||||||||| |||||||| | |||||||| ||||||| Sbjct 683 TTTCTCTTGGCGTTCTTGGCGTTATCTCTCAGGTAACTTTTAAATTGCAACCGATGTTCA 742 Query 692 AGAGATCGTTAACCTTTGTTATGCAAAACGATTCGGATTTCGGAGATCAAGCCGTGAC-T 750 ||||||| ||| | ||| ||| |||| ||||||||||| || ||||||||||| || | Sbjct 743 AGAGATCACTAAGGTATGTCATGAAAAATGATTCGGATTTTGGGGATCAAGCCGTAACAT 802 Query 751 TTCGGGGAA-AAACATGAGTTTGCAGATTTCTTATGGTTACCAAGCCAAGGCAAAGTGGT 809 || ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 803 TT--GGGAAGAAACATGAGTTTGCGGATTTCATATGGTTACCAAGCCAAGGCAAAGTGGT 860 Query 810 GTATCGAATGGACGACCGAGTTCCGGTCAACACTTCAGGCAATGGCTTGTTCGACTTTT- 868 ||||||||||||||||||||| |||||||||| ||||| || || ||| |||| ||| Sbjct 861 GTATCGAATGGACGACCGAGTAGCGGTCAACACCTCAGGTAACGGTTTGCTCGA-TTTCA 919 Query 869 TCCCATTCCGTCCACAACTCTCTGTAGCGTTAGCCATCATTAGATCCTTAGAGGAGA-GT 927 | | |||||| | |||||||||| || ||||||||||| ||||||| |||||||| | Sbjct 920 TGTCGTTCCGTTCGCAACTCTCTGCCGCATTAGCCATCATAAGATCCTCAGAGGAGACGC 979 Query 928 GAAGAGTCATCCGGAGATGCAAACGACAAGTGTGCGAGAGCAGAGCAAATAACGTCGTTT 987 ||||| || | ||||||| || | || |||||| |||| | || ||| |||| | Sbjct 980 -AAGAGAGATTCAGAGATGCGAATGGGAAATGTGCGGGAGCC-A-CAT-TAATTTCGTCT 1035 Query 988 T---TGTTTTCCATC-TCCTACGGTGTGACTAACAATGGTATGGA-ATTCACAGGCTATC 1042 ||||| | | | || |||||| |||| |||||||| ||| | ||| || || |||| Sbjct 1036 ACACTGTTTGCTA-CATCATACGGTTTGACCAACAATGGCATG-ATATTTACTGGTTATC 1093 Query 1043 CGGTGATCGGAAAGC-AAAACCATATGATGTCGTCGGG-TACATGTCTAGACAGCCATCA 1100 |||| || |||| || |||||| |||||||||||| || | |||| |||||||| | ||| Sbjct 1094 CGGTTATTGGAA-GCCAAAACCGTATGATGTCGTCAGGAT-CATGCCTAGACAGTCTTCA 1151 Query 1101 GGACGGACTGATCAC-GTCTTGTCCTTGGGATCCACGGATAAAAGGCCAATTCTTTCACC 1159 || ||| | ||||| | ||||||| |||||| |||| |||||| | |||||||||||| Sbjct 1152 TGATGGATTAATCACAG-CTTGTCCATGGGATTCACGCATAAAAAGTGAATTCTTTCACC 1210 Query 1160 AAACAGCATTCAGTATCCCTCTCACACGTGTCAAAGGTTTCATCAACGACATCAAAGCAC 1219 ||||| | |||||||| || ||||| | |||||| |||||||||||||||||||| | | Sbjct 1211 AAACAACTTTCAGTATTCCGCTCACGCAAGTCAAAAGTTTCATCAACGACATCAAATCTC 1270 Query 1220 TCGTAAAGATTGAACCGAAATCTCTCTGCGCCCTTGAACGC-AGCAATGGTATCCTCATC 1278 | || ||||| || |||||||||| || | ||||| | | | | ||||||| || || Sbjct 1271 TTGTCAAGATAGAGTCGAAATCTCTATGTGGACTTGAGCTCTA-CTATGGTATTCTAATG 1329 Query 1279 CGTTATGTGACATCCTCTCCTGCTTTTCTTGGGAAAGAAGAAA-AAGCTTTAGATTTTGA 1337 |||||||| ||||| ||||| || | ||| ||||||||| | | |||||||||| ||||| Sbjct 1330 CGTTATGTCACATCTTCTCCGGCCTATCTCGGGAAAGAA-ACAGAAGCTTTAGACTTTGA 1388 Query 1338 CCTAACTTACTACCGAAGC-AAAGATGATCCCTTAGCACCACGTCTCTACGAGGATTTCA 1396 ||| || || |||||| || ||| | |||| |||||||| || || ||||| ||||| | Sbjct 1389 CCTCACGTATTACCGA-GCCAAA-A--ATCCGTTAGCACCGCGACTATACGAAGATTTTA 1444 Query 1397 TCGAAGAGATCGAACAAATGGCGATATTTAAATACAATGCATTGCCACATTGGGGGAAGA 1456 | ||||| ||||| ||||| ||| | || || || || || ||||| |||||||| |||| Sbjct 1445 TAGAAGAAATCGAGCAAATTGCGTTGTTCAAGTATAACGCCTTGCCGCATTGGGGTAAGA 1504 Query 1457 ATAGGAACCTAGCGTTTGATGGCGTGATTAGAAAGTACAAGAACG--CAAACACGTTTTT 1514 | || || ||||||||||||| ||||||| |||||||||||||| | || || || Sbjct 1505 ACAGAAATTTAGCGTTTGATGGAGTGATTAAAAAGTACAAGAACGTGCCGGCA--TTCTT 1562 Query 1515 GAAAGTAAAAGAGAGATTTGATCCTTTAGGGTTGT-TT-TCGACG-GAATGGACCAACCA 1571 ||||| ||||| || | |||||| | ||||| | || || | | ||||||||||| || Sbjct 1563 CAAAGTTAAAGAAAGCTATGATCCAAT-GGGTT-TATTCTCAA-GTGAATGGACCAATCA 1619 Query 1572 AATTCT-AGGTTTAAAAGGAAACGTGACGATTGTGAAAGAAGGATGTGCCTTGGAAGGAC 1630 || || ||| |||||||||| |||||||| | ||||| |||||||| || || || Sbjct 1620 GAT-CTTAGGAATAAAAGGAAATGTGACGATAATAAAAGATGGATGTGCATTAGAGGG-- 1676 Query 1631 TTTGTGT-T-TGTTCGGATGATGCTCATTGTGCTCCCAAGAAAGGTTATTTGTGTCGACC 1688 ||||||| | |||||||| ||||| ||||||||||| | ||||| |||||||||||||| Sbjct 1677 TTTGTGTATATGTTCGGAGGATGCACATTGTGCTCCGACCAAAGGATATTTGTGTCGACC 1736 Query 1689 AGGTAAAGTTTATACA-AAGGCTAGAGTTTGTAC 1721 ||| ||||| || | | ||| ||||||| ||||| Sbjct 1737 AGGAAAAGTCTACATAGAAG-CTAGAGTATGTAC 1769 > Ahg887421 jgi|Araly1|887421|Al_scaffold_0994_1 Length=894 Score = 209 bits (113), Expect = 5e-53 Identities = 175/204 (86%), Gaps = 7/204 (3%) Strand=Plus/Plus Query 692 AGAGATCGTTAACCTTTGTTATGCAAAACGATTCGGATTTCGGAGATCAAGCCGTGACTT 751 ||||||| |||| | | |||| |||| ||||||||||||| ||||||||||||||||| Sbjct 686 AGAGATCACTAACATATACTATGAAAAATGATTCGGATTTCGAAGATCAAGCCGTGACTT 745 Query 752 TCGGGGAA-AAACATGAGTTTGCAGATTTCTTATGGTTACCAAGCCAAGGCAAAGTGGTG 810 | || || ||||| |||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 746 T-TGGAAAGAAACACGAGTTTGCGGATTTCATATGGTTACCAAGCCAAGGCAAAGTGGTG 804 Query 811 TATCGAATG-GACGACCGAGTTCCGGTCAACACTTCAGGCAATGGCTTGTTCGACTTTTT 869 ||||||| | || ||| |||| || |||||||| || |||||||| |||||||| ||||| Sbjct 805 TATCGAA-GAGATGAC-GAGTACCCGTCAACACATCGGGCAATGGTTTGTTCGATTTTTT 862 Query 870 -CCCATTCCGTCCACAACTCTCTG 892 ||| |||||| |||||||||||| Sbjct 863 GCCC-TTCCGTTCACAACTCTCTG 885 > Ahg935659 jgi|Araly1|935659|scaffold_403647.1 Length=1786 Score = 167 bits (90), Expect = 3e-40 Identities = 141/165 (85%), Gaps = 5/165 (3%) Strand=Plus/Plus Query 692 AGAGATCGTTAACCTTTGTTATGCAAAACGATTCGGATTTCGGAGATCAAGCCGTGACTT 751 ||||||| |||| | | |||| |||| ||||||||||||| ||||||||||||||||| Sbjct 733 AGAGATCACTAACATATACTATGAAAAATGATTCGGATTTCGAAGATCAAGCCGTGACTT 792 Query 752 TCGGGGAA-AAACATGAGTTTGCAGATTTCTTATGGTTACCAAGCCAAGGCAAAGTGGTG 810 | || || ||||| |||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 793 T-TGGAAAGAAACAGGAGTTTGCGGATTTCATATGGTTACCAAGCCAAGGCAAAGTGGTG 851 Query 811 TATCGAATG-GACGACCGAGTTCCGGTCAACACTTCAGGCAATGG 854 ||||||| | || ||| |||| || |||||||| || |||||||| Sbjct 852 TATCGAA-GAGATGAC-GAGTACCCGTCAACACATCGGGCAATGG 894 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67115011690 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5