BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT1G33415.1

Length=1400
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg922435 jgi|Araly1|922435|scaffold_103716.1                        113    3e-24


> Ahg922435 jgi|Araly1|922435|scaffold_103716.1
Length=244

 Score =  113 bits (61),  Expect = 3e-24
 Identities = 69/73 (95%), Gaps = 0/73 (0%)
 Strand=Plus/Plus

Query  359  TTCGTTCTAAACAATGGATCATGATACTCGCAGCAATAAGCTTCAGAAATTCTTTGTCGC  418
            |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct  8    TTCGTTCTCAACAATGGATCATGATACTTGCAGCAATAAGCTTCAGAAATTCTTTGTCAC  67

Query  419  CATGGAAACGGCC  431
            ||||||||| |||
Sbjct  68   CATGGAAACAGCC  80



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 52335996630


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5