BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G35540.1
Length=1818
Score E
Sequences producing significant alignments: (Bits) Value
Ahg473654 jgi|Araly1|473654|fgenesh2_kg.1__3608__AT1G35540.1 2254 0.0
Ahg319704 jgi|Araly1|319704|fgenesh1_pm.C_scaffold_3002720 2134 0.0
Ahg336503 jgi|Araly1|336503|fgenesh1_pg.C_scaffold_1003068 1166 0.0
Ahg913495 jgi|Araly1|913495|Al_scaffold_0001_3749 937 0.0
> Ahg473654 jgi|Araly1|473654|fgenesh2_kg.1__3608__AT1G35540.1
Length=1806
Score = 2254 bits (1220), Expect = 0.0
Identities = 1631/1823 (89%), Gaps = 54/1823 (3%)
Strand=Plus/Plus
Query 1 ATGGAAAGTGGCAACGTTGTGAATACACAACCTGAATTATCAGGCAT-A-A-TTGATGGA 57
|||||||||||||| ||||||||| | |||||||||||||||||||| | | ||||||||
Sbjct 1 ATGGAAAGTGGCAATGTTGTGAATGCGCAACCTGAATTATCAGGCATAACAGTTGATGGA 60
Query 58 TCCAAGAGTTATATGTACGAGCAGTTATGGAAACTCTGTGCGGGACCTTTGTGTGATATT 117
|||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 61 TCCAAGAGATATATGTACGAGCAGTTATGGAAACTGTGTGCTGGACCTTTGTGTGATATT 120
Query 118 CCAAAACTTGGAGAAAAGGTTTATTACTTTCCTCAAGGCCATATAGAGCTTGTTGAGGCA 177
|||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 121 CCAAAAATTGGAGAAAAAGTTTATTACTTTCCTCAAGGCCACATAGAGCTTGTTGAGGCA 180
Query 178 TCTACAAGAGAAGAGTTGAATGAGTTACAACCAATTTG-TGATTTTCCTTCTAAGCTTCA 236
|||||| ||||| ||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct 181 TCTACAGGAGAAAAGTTGAATGAGTTACAACCAA-TTGTTGATCTTCCTTCTAAGCTTCA 239
Query 237 ATGTCGTGTTATTGCTATTCAACTTAAGGTGGAAA-ACAATAGTGATGAGACTTATGCTG 295
||||||||||||| ||||||| ||||||||||||| | ||||||||||||||||||||||
Sbjct 240 ATGTCGTGTTATTACTATTCAGCTTAAGGTGGAAAGA-AATAGTGATGAGACTTATGCTG 298
Query 296 AGATCACTTTGATGCCAGATACAACTCAAGTTGTAATCCCTACTCAGAATCAAAATCAAT 355
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 299 AGATCACTTTGATGCCATATACAACTCAAGTTGTAATCCCTACTCAGAATGAAAATCAAT 358
Query 356 TTAGGCCATTAGTTAATTCCTTTACGAAGGTTTTAACGGCCTCAGATACAAGCGTTCATG 415
||||||||||||||||||||||||| ||||||||||| |||||||||||||| | ||||
Sbjct 359 TTAGGCCATTAGTTAATTCCTTTACAAAGGTTTTAACAGCCTCAGATACAAGTGCCCATG 418
Query 416 GTGGATTCTCTGTTCCGAAAAAACATGCCATTGAATGTCTCCCTCCGCTGGATATGTCAC 475
|||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| |
Sbjct 419 GTGGATTCTCTGTTCCGAGAAAACTTGCCATTGAATGTCTTCCTCCGCTGGATATGTCTC 478
Query 476 AGCCTCTACCGACACAAGAAATTCTTGCTATAGATCTTCATGGTAATCAATGGAGATTCA 535
||||| ||||| |||||||| ||||| |||||||||| ||||||||||||||||||||||
Sbjct 479 AGCCTTTACCGGCACAAGAACTTCTTACTATAGATCTCCATGGTAATCAATGGAGATTCA 538
Query 536 GACACATCTATAGAGGTACAGCGCAAAGACATTTGTTAACAATTGGTTGGAATGCATTCA 595
||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||
Sbjct 539 AACACAGCTATAGAGGTACACCGCGAAGACATTTGTTAACAACAGGTTGGAATGCATTCA 598
Query 596 CAACATCaaaaaaaTTGGTTGAAGGAGATGTTATTGTATTCGTTAGGGGAGAGACTGGAG 655
|||||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||
Sbjct 599 TAACATCCAAAAAATTGGTTGCAGGGGATGTTATTGTATTCCTTAGGGGAGAGACTGGAG 658
Query 656 AGTTACGAGTTGGTATCAGACGAGCAGGACATCAACAAGGGAATATACCTTCATCAATAG 715
||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct 659 AGTTACGAGTTGGTATCAGACGAGCGGGATATCAACAAGGGAACATACCTTCATCAATAA 718
Query 716 TATCAATAGAAAGTATGAGACATGGGA-TAATTGCTTCTGCAAAGCATGCTTTTGATAAC 774
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 719 TATCAATAGAAAGTATGAGACAT-GGAGTAATTGCTTCTGCAAAGCATGCTTTTGATAAC 777
Query 775 CAATGTATGTTCATTGTGGTTTACAAGCCAAGGTCAAGTCAATTTATTGTCAGTTACGAC 834
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 778 CAATGTATGTTCATTGTGGTTTACAAGCCAAGGTCAAGTCAATTTATTGTCAATTACGAT 837
Query 835 AAATTCTTAGACGTTGTGAACAATAAGTTCAATGTCGGTTCAAGATTTACAATGCGGTTT 894
||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 838 AAATTCTTAGACGCCATGAACAATAAGTTCAATGTCGGGTCAAGATTTACAAAGCGGTTT 897
Query 895 GAGGGTGATGATTTCTCTGAAAGAAGATCTTTTGGGACAATTATTGGAGTTAGTGATTTC 954
|||| |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||
Sbjct 898 GAGGAAGATGATTTCTCTGAAAGAAGATATTTCGGGACAATTATTGGAGTTATTGATTTC 957
Query 955 TCTCCTCATTGGAAGTGTTCAGAGTGGCGCAGCTTAGAAGTGCAGTGGGATGAATTTGCA 1014
|||||||||||||| |||||||| ||||| |||||| || || |||||||||||
Sbjct 958 TCTCCTCATTGGAAATGTTCAGAATGGCGTAGCTTA-AA----AG----ATGAATTTGCA 1008
Query 1015 TCATTTCCGAGACCAAACCAAGTTTCACCATGGGACATCGAACATTTAACGCCTTGGTCA 1074
|| ||||||||||| | ||||||| |||||||| || ||| ||| |||||||| ||||
Sbjct 1009 TCGTTTCCGAGACCTGATAAAGTTTCCCCATGGGAAATAGAATATTCAACGCCTTCGTCA 1068
Query 1075 AATGTT-TCCAGGTCATCTTTTCTCAAGAACAAGCGTTCACGAGAAGTTAATGAAATCGG 1133
|||||| ||| ||| |||| | || |||||||| ||||||||||| |||||||||||||
Sbjct 1069 AATGTTCTCC-GGTTATCTATGCTTAAGAACAAATGTTCACGAGAATTTAATGAAATCGG 1127
Query 1134 TTCTTCCTCATCACATCTCTTGCCTCCTACATTGACACAAGGACAAGAAATTGGACAACA 1193
|||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1128 TTCTTCATCATCACACCTCTTGCCTCCTATATTGACACAAGGACAAGAAATTGGACAACC 1187
Query 1194 AAGCATGGCCACCCCGATGAATATTTCTCTTCGTTATCGTGATATTACTGAAGATGCTAT 1253
||||||| || ||||||||||| || ||||| ||||||||||| | |||||||| | |
Sbjct 1188 AAGCATGACCTCCCCGATGAATGTTCCTCTTAGTTATCGTGATGCAATTGAAGATGAT-T 1246
Query 1254 -GACTCCTTCTAGATTGCTAATGAGCTACCCTGTCCAACCAATGGCCAAACTAAATTACA 1312
|||||||||||| ||||||||||||||| |||||||| ||||| || |||||||||||
Sbjct 1247 CGACTCCTTCTAGGTTGCTAATGAGCTACTCTGTCCAAACAATGTCCCGACTAAATTACA 1306
Query 1313 ATAATG-T-----GGTTACACCAAT-A--GAAGAAAATATAACAACCAATGCAGTCGCTA 1363
|||| | | |||||||||||| | |||| ||||||||||| ||||| || |||||
Sbjct 1307 ATAACGATCAAATGGTTACACCAATTATAGAAGGAAATATAACAAACAATGGAGGCGCTA 1366
Query 1364 GTTTTAG-GTTGTTTGGAGTCTCTCTGGCCACTCCTTCGGTGATCAAAGATCCCGTTGAA 1422
||| ||| || ||||||||||||||| |||||||| | ||||||||||||||| |||||
Sbjct 1367 GTTGTAGAGT-GTTTGGAGTCTCTCTTGCCACTCCACCAGTGATCAAAGATCCCATTGAA 1425
Query 1423 CAAATTGG-CT--TG----------GAGATTTCTAGACTTACTCAGGaaaaaaaGTTTGG 1469
||||| || || | |||||||||| |||| | || || |||||||||||
Sbjct 1426 CAAAT-GGACTCATATCCAAACTCAGAGATTTCTAAACTTTCCCAAGAGAAAAAGTTTGG 1484
Query 1470 TCAAAGCCAAATTTTGAGATCACCAACAGAGATCCAAAGCAAGCAGTTCAGTTCTACCAG 1529
|| | ||||||| ||||||||||| ||||||||||||||||||| | |||||||||||
Sbjct 1485 TCTAGGCCAAAT---GAGATCACCAAGAGAGATCCAAAGCAAGCAGCTGAGTTCTACCAG 1541
Query 1530 AACTTGTACCAAAGTTCAAATGCAAGGTGTAACAATAGGAAGAGCTGTGGATTTAAGTGT 1589
||| |||||||||||||||||||| |||||| || ||||||||||| | |||||||||||
Sbjct 1542 AACATGTACCAAAGTTCAAATGCATGGTGTAGCACTAGGAAGAGCTCTTGATTTAAGTGT 1601
Query 1590 TCTTAATGGATATGATCAGTTAATACTAGAATTGGAGAAGCTCTTCGATCTCAAAGGCCA 1649
||||||||||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||
Sbjct 1602 TCTTAATGGATATGATCAGCTAATACTGGAATTGGAGAAACTCTTTGATCTCAAAGGCCA 1661
Query 1650 ATTGCAAG-CTCGCAACCAATGGGAAATAGCTTTCACAA-ATAATGAAGAGGATAAGATG 1707
|||||| | ||||||||||||||||||||||||| || | |||||||| ||| |||||
Sbjct 1662 GTTGCAAAAC-CGCAACCAATGGGAAATAGCTTTCA-AAGACAATGAAGAAGATGAGATG 1719
Query 1708 CTTGTTGGAGAAGATCCATGGCCTGAATTCTGCAACATGGTGAAGAAGATATTCATATAT 1767
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1720 CTTGTTGGAGACGATCCATGGCCTGAATTCTGCAACATGGTGAAGAAGATAATCATATAT 1779
Query 1768 TCAAAAGAGGAGGTCAAAAACTT 1790
||||| |||||||||||||||||
Sbjct 1780 TCAAATGAGGAGGTCAAAAACTT 1802
> Ahg319704 jgi|Araly1|319704|fgenesh1_pm.C_scaffold_3002720
Length=1794
Score = 2134 bits (1155), Expect = 0.0
Identities = 1600/1809 (88%), Gaps = 54/1809 (3%)
Strand=Plus/Plus
Query 1 ATGGAAAGTGGCAACGTTGTGAATACACAACCTGAATTATCAGGCAT---AATTGATGGA 57
||||||||||| |||||||| ||| ||||||||||||||||||| || |||||||| |
Sbjct 1 ATGGAAAGTGGTAACGTTGTAAATGCACAACCTGAATTATCAGGTATAACAATTGATGTA 60
Query 58 TCCAAGAGTTATATGTACGAGCAGTTATGGAAACTCTGTGCGGGACCTTTGTGTGATATT 117
|||||||| |||||||||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct 61 TCCAAGAGATATATGTACGAGCAGTTATGGAAATTGTGTGCTGGACCTTTGTGTGATATT 120
Query 118 CCAAAACTTGGAGAAAAGGTTTATTACTTTCCTCAAGGCCATATAGAGCTTGTTGAGGCA 177
|||||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 121 CCAAAAATTGGAGAAAAAGTTTATTACTTTCCTCAAGGCCACATAGAGCTTATTGAGGCA 180
Query 178 TCTACAAGAGAAGAGTTGAATGAGTTACAACCAATTTGTGATTTTCCTTCTAAGCTTCAA 237
| ||||||||||||||||||| | |||||||||||| |||| |||||||||||||||||
Sbjct 181 TATACAAGAGAAGAGTTGAATAAAATACAACCAATTTTTGATCTTCCTTCTAAGCTTCAA 240
Query 238 TGTCGTGTTATTGCTATTCAACTTAAGGTGGAAAACAATAGTGATGAGACTTATGCTGAG 297
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 241 TGTCGTGTTATTGCTATTCAGCTTAAGGTGGAAAAAAATAGTGATGAGACTTATGCTGAA 300
Query 298 ATCACTTTGATGCCAGATACAACTCAAGTTGTAATCCCTACTCAGAATCAAAATCAATT- 356
|| ||||||||||||||| || |||||||||||||||||||||||| | |||| |||
Sbjct 301 ATTACTTTGATGCCAGAT---ACGCAAGTTGTAATCCCTACTCAGAATGATAATC-ATTA 356
Query 357 TAGGCCATTAGTTAATTCCTTTACGAAGGTTTTAACGGCCTCAGATACAAGCGTTCATGG 416
||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 357 TAGGCCATTGGTTAATTCCTTTACAAAGGTTTTAACGGCCTCAGATACAAGCGTCCATGG 416
Query 417 TGGATTCTCTGTTCCGAAAAAACATGCCATTGAATGTCTCCCTCCGCTGGATATGTCACA 476
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 417 TGGATTCTCTGTTCCCAGAAAACTTGCCATTGAATGTCTCCCTCCGCTGGATATGTCTCA 476
Query 477 GCCTCTACCGACACAAGAAATTCTTGCTATAGATCTTCATGGTAATCAATGGAGATTCAG 536
|||||||||| |||||||| ||||| |||||||||| ||||| ||||||||||||||||
Sbjct 477 GCCTCTACCGGCACAAGAACTTCTTACTATAGATCTCCATGGGAATCAATGGAGATTCAA 536
Query 537 ACACATCTATAGAGGTACAGCGCAAAGACATTTGTTAACAAT-TGGTTGGAATGCATTCA 595
||||| ||| ||||||||| ||| ||||||||||||||| || ||||||||||||||||
Sbjct 537 ACACAGCTACAGAGGTACACCGCGAAGACATTTGTTAAC-ATCAGGTTGGAATGCATTCA 595
Query 596 CAACATCaaaaaaaTTGGTTGAAGGAGATGTTATTGTATTCGTTAGGGGAGAGACTGGAG 655
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 596 CAACATCAAAAAAATTGGTTGCAGGAGATGTTATTGTATTCCTTAGGGGAGAGACTGGAG 655
Query 656 AGTTACGAGTTGGTATCAGACGAGCAGGACATCAACAAGGGAATATACCTTCATCAATAG 715
||||||||||||||||||||||||| |||||||||||| ||| |||| ||||||| ||
Sbjct 656 AGTTACGAGTTGGTATCAGACGAGCGGGACATCAACAAAAGAACATACATTCATCACTAA 715
Query 716 TATCAATAGAAAGTATGAGACATGGGA-TAATTGCTTCTGCAAAGCATGCTTTTGATAAC 774
|||||||||| |||||||||||| ||| |||||||||| ||| |||||||||| |||||
Sbjct 716 TATCAATAGATAGTATGAGACAT-GGAGTAATTGCTTCCGCAGTGCATGCTTTTAATAAC 774
Query 775 CAATGTATGTTCATTGTGGTTTACAAGCCAAGGTCAAGTCAATTTATTGTCAGTTACGAC 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 775 CAATGTATGTTCATTGTGGTTTACAAGCCAAGGTCAAGTCAATTTATTGTCAGTTACAAC 834
Query 835 AAATTCTTAGACGTTGTGAACAATAAGTTCAATGTCGGTTCAAGATTTACAATGCGGTTT 894
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 AAATTCGTAGACGCTGTGAACAATAAGTTCAATGTCGGTTCAAGATTTACAATGCGGTTT 894
Query 895 GAGGGTGATGATTTCTCTGAAAGAAGATCTTTTGGGACAATTATTGGAGTTAGTGATTTC 954
|||||||| ||||||||||||||||||| || |||||||||||||||||||| | |||||
Sbjct 895 GAGGGTGAAGATTTCTCTGAAAGAAGATATTCTGGGACAATTATTGGAGTTAATAATTTC 954
Query 955 TC-TCCTCATTGGAAGTGT-TCAGAGTGGCGCAGCTTAGAAGTGCAGTGGGATGAATTTG 1012
|| || |||||||| | | ||||| ||||| |||||||||||| |||||||||||||||
Sbjct 955 TCCTC-TCATTGGATG-GAATCAGAATGGCGAAGCTTAGAAGTGAAGTGGGATGAATTTG 1012
Query 1013 CATCATTTCCGAGACCAAACCAAGTTTCACCATGGGACATCGAACATTTAACGCCTTGGT 1072
|||||||||| ||||| | |||||||||||||||| ||||||||||||||||||| ||
Sbjct 1013 CATCATTTCCAAGACCTGATAAAGTTTCACCATGGGATATCGAACATTTAACGCCTTCGT 1072
Query 1073 CAAATGTT-TCCAGGTCATCTTTTCTCAAGAACAAGCGTTCACGAGAAGTTAATGAAATC 1131
||||||| ||| || ||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct 1073 TAAATGTTCTCC-GGCCATCTTTGCTCAAAAACAAGCGTTCCCGAGAAGTTAATGAAATC 1131
Query 1132 GGTTCTTCCTCATCACATCTCTTGCCTCCTACATTGACACAAGGACAAGAAATTGGACAA 1191
||||| | |||||||||||||||| ||||| |||||||||||| |||||||||||| ||
Sbjct 1132 GGTTCAACATCATCACATCTCTTGCATCCTATATTGACACAAGGTCAAGAAATTGGAGAA 1191
Query 1192 CAAAGCATGGCCACCCCGATGAATATTTCTCTTCGTTATCGTGAT-ATTACTGAAGATGC 1250
| ||||||| || ||||||||||| ||| |||| ||||| | ||| | | ||||||||
Sbjct 1192 CCAAGCATGACCTCCCCGATGAATGTTTTTCTTAGTTATTGCGATGAA-ATTGAAGATGA 1250
Query 1251 T-ATGACTCCTTCTAG-ATTGCTAATGAGCTACCCTGTCC-AACCAATGGCCAAACTAAA 1307
| | |||||||||||| || |||||||||||| | ||||| ||| |||| |||| |||||
Sbjct 1251 TGA-GACTCCTTCTAGGAT-GCTAATGAGCTATCATGTCCCAAC-AATGCCCAAGCTAAA 1307
Query 1308 TTACAATAATG-T-----GGTTACACCAATAGAAGAAAATATAACAACCAATGCAGTCGC 1361
||||||||| | | ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1308 TTACAATAACGATCAAATGGTTACACCAATAGAAGAAAATATAACAACCAATGCAAACGC 1367
Query 1362 TAGTTTTAGGTTGTTTGGAGTCTCTCTGGCCACTCCTTCGGTGATCAAAGATCCCGTTGA 1421
||||||||| |||||||||||||||| |||||| |||| ||||| ||||||||| ||||
Sbjct 1368 TAGTTTTAGACTGTTTGGAGTCTCTCTTGCCACTTCTTCAGTGATTAAAGATCCCATTGA 1427
Query 1422 AC--A---AAT--TGGC-----T-TGGAGATTTCTAGACT-TACTCAGGaaaaaaaGTTT 1467
|| | ||| | | | || ||||||||| ||| | ||| || |||||| ||
Sbjct 1428 ACCGATGGAATCATATCCAAAATCTG-AGATTTCTAAACTCTG-TCAAGAGAAAAAGCTT 1485
Query 1468 GGTCAAAGCCAAATTTTGAGATCACCAACAGAGATCCAAAGCAAGCAGTTCAGTTCTACC 1527
|||| | |||||| | | | ||| |||| ||||||||||||||||||||||||||||||
Sbjct 1486 GGTCTAGGCCAAACTATAACATCTCCAAGAGAGATCCAAAGCAAGCAGTTCAGTTCTACT 1545
Query 1528 AGAACTTGTACCAAAGTTCAAATGCAAGGTGTAACAATAGGAAGAGCTGTGGATTTAAGT 1587
|| | |||||||||||||||||||||||||||| || ||||||||||| | ||||||| |
Sbjct 1546 AGGAGTTGTACCAAAGTTCAAATGCAAGGTGTACCAGTAGGAAGAGCTCTCGATTTAAAT 1605
Query 1588 GTTCTTAATGGATATGATCAGTTAATACTAGAATTGGAGAAGCTCTTCGATCTCAAAGGC 1647
|||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||| |||
Sbjct 1606 GTTCTTAATGGATATGATCACCTAATAATAGAATTGGAGAAACTCTTTGATCTCAACGGC 1665
Query 1648 CAATTGCAAGCTCGCAACCAATGGGAAATAGCTTTCACAA-ATAATGAAGAGGA-TAAGA 1705
|| |||||| | |||||||||||| |||||||||||| || | ||||||| | | | |||
Sbjct 1666 CAGTTGCAAACCCGCAACCAATGGAAAATAGCTTTCA-AAGACAATGAAG-GAAATGAGA 1723
Query 1706 TGCTTGTTGGAGA-AGATCCATGGCCTGAATTCTGCAACATGGTGAAGAAGATATTCATA 1764
|||||||||||| | |||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 1724 AGCTTGTTGGAGACA-ATCCATGGCCTGAATTTTGCAGCATGGTGAAGAAGATATTCATA 1782
Query 1765 TATTCAAAA 1773
||| |||||
Sbjct 1783 TATCCAAAA 1791
> Ahg336503 jgi|Araly1|336503|fgenesh1_pg.C_scaffold_1003068
Length=1737
Score = 1166 bits (631), Expect = 0.0
Identities = 908/1038 (87%), Gaps = 33/1038 (3%)
Strand=Plus/Plus
Query 805 AGGTCAAGTCAATTTATTGTCAGTTACGACAAATTCTTAGACGTTGTGAACAATAAGTTC 864
|||||||||||||||||||||| |||||| ||||||||||||| || ||||||||||||
Sbjct 709 AGGTCAAGTCAATTTATTGTCAATTACGATAAATTCTTAGACGCCGTAAACAATAAGTTC 768
Query 865 AATGTCGGTTCAAGATTTACAATGCGGTTTGAGGGTGATGATTTCTCTGAAAGAAGATCT 924
|||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |
Sbjct 769 AATGTCGGGTCAAGATTTACAATGCGGTTTGAGGAAGAAAATTTCTCTGAAAGAAGATAT 828
Query 925 TTTGGGACAATTATTGGAGTTAGTGATTTCTCTCCTCATTGGAAGTGTTCAGAGTGGCGC 984
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 829 TTTGGGACAATTATTGGAGTTAGTGATTTCTCTCCTCATTGGAAATGTTCAGAATGGCGT 888
Query 985 AGCTTAGAAGTGCAGTGGGATGAATTTGCATCATTTCCGAGACCAAACCAAGTTTCACCA 1044
|||||| ||||||||||||||||||||||||||||||||||||| | ||||||| |||
Sbjct 889 AGCTTAAAAGTGCAGTGGGATGAATTTGCATCATTTCCGAGACCTGATAAAGTTTCCCCA 948
Query 1045 TGGGACATCGAACATTTAACGCCTTGGTCAAATGTT-TCCAGGTCATCTTTTCTCAAGAA 1103
||||| || |||||| |||||||| |||||||||| ||| | |||||| | || |||||
Sbjct 949 TGGGAAATAAAACATTCAACGCCTTCGTCAAATGTTCTCCCG-TCATCTATGCTTAAGAA 1007
Query 1104 CAAGCGTTCACGAGAAGTTAATGAAATCGGTTCTTCCTCATCACATCTCTTGCCTCCTAC 1163
||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1008 CAAACGTTCACGAGAAGTTAATGAAATCGGTTCTTCATCATCACACCTCTTGCCTCCTAT 1067
Query 1164 ATTGACACAAGGACAAGAAATTGGACAACAAAGCATGGCCACCCCGATGAATATTTCTCT 1223
||||||||||||||||||||||||||||| ||||||| || |||| |||||| || ||||
Sbjct 1068 ATTGACACAAGGACAAGAAATTGGACAACCAAGCATGACCTCCCCAATGAATGTTCCTCT 1127
Query 1224 TCGTTATCGTGATATTACTGAAGATGCTAT-GACTCCTTCTAGATTGCTAATGAGCTACC 1282
| |||| |||||| | |||||||| | | |||||||||||| |||||||||||||||
Sbjct 1128 TAGTTACCGTGATGCAATTGAAGATGAT-TCGACTCCTTCTAGGTTGCTAATGAGCTACT 1186
Query 1283 CTGTCCA-ACCAATGGCCAAACTAAATTACAATAATG-TG-----GTTACACCAATAGAA 1335
||||||| || |||| || ||||||||||||||| | | |||||||||||||||
Sbjct 1187 CTGTCCAGAC-AATGCCCCGACTAAATTACAATAACGATCAAATAGTTACACCAATAGAA 1245
Query 1336 GAAAATATAACAACCAATGCAGTCGCTAGTTTTAG-GTTGTTTGGAGTCTCTCTGGCCAC 1394
| ||||||||||| ||||| || |||||||| ||| || ||||||||||||||| |||||
Sbjct 1246 GGAAATATAACAAACAATGGAGGCGCTAGTTGTAGAGT-GTTTGGAGTCTCTCTTGCCAC 1304
Query 1395 TCCTTCGGTGATCAAAGATCCCGTTGAACAAATTG-----G--C-----TTGGAGATTTC 1442
|||| | ||||||||||||||| |||||||||||| | | || ||||||||
Sbjct 1305 TCCTCCAGTGATCAAAGATCCCATTGAACAAATTGACTCAGATCCAAACTTAGAGATTTC 1364
Query 1443 TAGACTTACTCAGGaaaaaaaGTTTGGTCAAAGCCAAATTTTGAGATCACCAACAGAGAT 1502
|| |||| |||| || |||| ||||||| | ||||||| ||||||| ||| ||||||
Sbjct 1365 TAAACTTTCTCAAGAGAAAATTTTTGGTCTAGGCCAAAT---GAGATCAACAAGAGAGAT 1421
Query 1503 CCAAAGCAAGCAGTTCAGTTCTACCAGAACTTGTACCAAAGTTCAAATGCAAGGTGTAAC 1562
||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1422 CCAAAGCAAGCAGTTGAGTTCTACCAGAACCTGTACCAAAGTTCAAATGCATGGTGTAAC 1481
Query 1563 AATAGGAAGAGCTGTGGATTTAAGTGTTCTTAATGGATATGATCAGTTAATACTAGAATT 1622
| ||||||||||| ||||||||||||||||||| |||||||||||| | ||||| |||||
Sbjct 1482 ACTAGGAAGAGCTCTGGATTTAAGTGTTCTTAACGGATATGATCAGCTGATACTGGAATT 1541
Query 1623 GGAGAAGCTCTTCGATCTCAAAGGCCAATTGCAAG-CTCGCAACCAATGGGAAATAGCTT 1681
||||| ||||| |||||||||||||| |||||| | ||||||||||||||||||| ||
Sbjct 1542 AGAGAAACTCTTTGATCTCAAAGGCCAGTTGCAAAAC-CGCAACCAATGGGAAATAGTTT 1600
Query 1682 TCACAAATAATGAAGAGGATAAGATGCTTGTTGGAGAAGATCCATGGCCTGAATTCTGCA 1741
||||| | |||||||| ||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 1601 TCACAGACAATGAAGAAGATGAGATGCTTGTTGGAGACGATCCATGGCCTGAATTCTGCA 1660
Query 1742 ACATGGTGAAGAAGATATTCATATATTCAAAAGAGGAGGTCAAAAACTTGAAGTCCAGGA 1801
||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1661 ACATGGTGAAGAAGATAATCATATATTCAAAAGAGGAGGTCAAAAACTTTAAGTCC-GGA 1719
Query 1802 AG-AGTCTCTCAAGTTGA 1818
| |||||||||| ||||
Sbjct 1720 AATAGTCTCTCAAATTGA 1737
Score = 857 bits (464), Expect = 0.0
Identities = 542/580 (93%), Gaps = 4/580 (1%)
Strand=Plus/Plus
Query 231 GCTTCAATGTCGTGTTATTGCTATTCAACTTAAGGTGGAAA-ACAATAGTGATGAGACTT 289
||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||||||
Sbjct 105 GCTTCAACGTCGTGTTATTGCTATTCAGCTTAAGGTGGAAAGA-AATAGTGATGAGACTT 163
Query 290 ATGCTGAGATCACTTTGATGCCAGATACAACTCAAGTTGTAATCCCTACTCAGAATCAAA 349
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 164 ATGCTGAGATCACTTTGATGCCAAATACAACTCAAGTTGTAATCCCTACTCAGAATGAAA 223
Query 350 ATCAATTTAGGCCATTAGTTAATTCCTTTACGAAGGTTTTAACGGCCTCAGATACAAGCG 409
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |
Sbjct 224 ATCAATTTAGGCCATTAGTTAATTCCTTTACAAAGGTTTTAACGGCCTCAGACACAAGTG 283
Query 410 TTCATGGTGGATTCTCTGTTCCGAAAAAACATGCCATTGAATGTCTCCCTCCGCTGGATA 469
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct 284 CCCATGGTGGATTCTCTGTTCCGAGAAAACTTGCCACTGAATGTCTCCCTCCGCTGGATA 343
Query 470 TGTCACAGCCTCTACCGACACAAGAAATTCTTGCTATAGATCTTCATGGTAATCAATGGA 529
|||| |||||| ||||| |||||||| ||||| |||||||||| ||||||||||||||||
Sbjct 344 TGTCTCAGCCTTTACCGGCACAAGAACTTCTTACTATAGATCTCCATGGTAATCAATGGA 403
Query 530 GATTCAGACACATCTATAGAGGTACAGCGCAAAGACATTTGTTAACAATTGGTTGGAATG 589
|||||| ||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||
Sbjct 404 GATTCAAACACAGCTATAGAGGTACACCGCGAAGACATTTGTTAACAACAGGTTGGAATG 463
Query 590 CATTCACAACATCaaaaaaaTTGGTTGAAGGAGATGTTATTGTATTCGTTAGGGGAGAGA 649
|||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||
Sbjct 464 CATTCATAACATCAAAAAAATTGGTTGCAGGGGATGTTATTGTATTCCTTAGGGGAGAGA 523
Query 650 CTGGAGAGTTACGAGTTGGTATCAGACGAGCAG-GACATCAACAAGGGAATATACCTTCA 708
||||||||||||||||| ||||||||||||| | || ||||||||||||| |||||||||
Sbjct 524 CTGGAGAGTTACGAGTTAGTATCAGACGAGC-GAGATATCAACAAGGGAACATACCTTCA 582
Query 709 TCAATAGTATCAATAGAAAGTATGAGACATGGGATAATTGCTTCTGCAAAGCATGCTTTT 768
||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 583 TCACTAATATCAATAGAAAGTATGAGACATGGGGTAATTGCTTCTGCAAAGCATGCTTTT 642
Query 769 GATAACCAATGTATGTTCATTGTGGTTTACAAGCCAAGGT 808
||||||||||||||||||||||||||||||||||||||||
Sbjct 643 GATAACCAATGTATGTTCATTGTGGTTTACAAGCCAAGGT 682
> Ahg913495 jgi|Araly1|913495|Al_scaffold_0001_3749
Length=1890
Score = 937 bits (507), Expect = 0.0
Identities = 681/765 (89%), Gaps = 12/765 (2%)
Strand=Plus/Plus
Query 240 TCGTGTTATTGCTATTCAACTTAAGGTGGAAAACAATAGTGATGAGACTTATGCTGAGAT 299
|||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 243 TCGTGTTATTGCTATTCAGCTTAAAGTGGAAAAAAATAGTGATGAGACTTATGCTGAGAT 302
Query 300 CACTTTGATGCCAGATACAACTCAAGTTGTAATCCCTACTCAGAATCAAAATCAATT-TA 358
||||||||||||| ||||||||||||| ||||||| || ||||||| | ||||| || ||
Sbjct 303 CACTTTGATGCCATATACAACTCAAGTGGTAATCCATAATCAGAATGATAATCA-TTATA 361
Query 359 GGCCATTAGTTAATTCCTTTACGAAGGTTTTAACGGCCTCAGATACAAGCGTTCATGGTG 418
|||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||
Sbjct 362 GGCCATCGGTTAATTCATTTACAAAGGTTTTAACGGCCTCAGATACAAGCGCCCATGGTG 421
Query 419 GATTCTCTGTTCCGAAAAAACATGCCATTGAATGTCTCCCTCCGCTGGATATGTCACAGC 478
||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||| |||
Sbjct 422 GATTCTCTGTTCCGAGAAAACATGCTATTGAATGTCTCCCTCCTCTGAATATGTCTGAGC 481
Query 479 CTCTACCGACACAAGAAATTCTTGCTATAGATCTTCATGGTAATCAATGGAGATTCAGAC 538
|||||||| |||||||| ||||| ||| |||||| || || |||||||||||||||| ||
Sbjct 482 CTCTACCGGCACAAGAACTTCTTACTACAGATCTCCAAGGGAATCAATGGAGATTCAAAC 541
Query 539 ACATCTATAGAGGTACAGCGCAAAGACATTTGTTAACAATTGGTTGGAATGCATTCACAA 598
||| ||| ||||||||| ||| |||||||||| |||||| |||||||| ||||||||||
Sbjct 542 ACAGCTACAGAGGTACACCGCCAAGACATTTGATAACAACAGGTTGGAACGCATTCACAA 601
Query 599 CATCaaaaaaaTTGGTTGAAGGAGATGTTATTGTATTCGTTAGGGGAGAGACTGGAGAGT 658
|||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||
Sbjct 602 CATCAAAAAAATTGGTTGCAGGGGATGTTATTGTATTCCTTAGGGGAGAGTGTGGAGAGT 661
Query 659 TACGAGTTGGTATCAGACGAGCAGGACATCAACAAGGGAATATACCTTCATCAATAGTAT 718
||||||||||||||||||| ||||| |||||||||||||| | |||||||||| || |||
Sbjct 662 TACGAGTTGGTATCAGACGGGCAGGGCATCAACAAGGGAACAGACCTTCATCACTAATAT 721
Query 719 CAATAGAAAGTATGAGACATGG-GATAATTGCTTCTGCAAAGCATGCTTTTGATAACCAA 777
||||||| |||||| ||||||| | |||||||||||||| |||||||||||||||||||
Sbjct 722 CAATAGATAGTATGGGACATGGAG-TAATTGCTTCTGCAGTGCATGCTTTTGATAACCAA 780
Query 778 TGTATGTTCATTGTGGTTTACAAGCCAAG-----G-TCAAGTCAATTTATTGTCAGTTAC 831
|||||||| |||||||||| |||||||| | ||||||||||||||||||||||||
Sbjct 781 TGTATGTTTATTGTGGTTTGTAAGCCAAGTATCAGGTCAAGTCAATTTATTGTCAGTTAC 840
Query 832 GACAAATTCTTAGACGTTGTGAACAATAAGTTCAATGTCGGTTCAAGATTTACAATGCGG 891
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 841 GACAAATTCTTAGACGCAGTGAACAAGAAGTTCAATGTCGGTTCAAGATTTACAATGCGA 900
Query 892 TTTGAGGGTGATGATTTCTCTGAAAGAAGATCTTTTGGGACAATTATTGGAGTTAGTGAT 951
||||| ||||||||||| ||||||||||||| || ||| |||||||||||||||| |||
Sbjct 901 TTTGAAGGTGATGATTTATCTGAAAGAAGATATTCTGGAACAATTATTGGAGTTAAAGAT 960
Query 952 TTCTCTCCTCATTGGAA-GTGTTCAGAGTGGCGCAGCTTAGAAGT 995
||||| |||||||||| | | |||| ||||| |||||||||||
Sbjct 961 TTCTCCCCTCATTGGATCGAAT-CAGAATGGCGAAGCTTAGAAGT 1004
Score = 826 bits (447), Expect = 0.0
Identities = 727/856 (85%), Gaps = 44/856 (5%)
Strand=Plus/Plus
Query 993 AGTGCAGTGGGATGAATTTGCATCATTTCCGAGACCAAACCAAGTTTCACCATGGGACAT 1052
|||| ||||||||||||||||||||||||| ||||| | ||||||| |||||||| ||
Sbjct 1041 AGTGAAGTGGGATGAATTTGCATCATTTCCAAGACCTGATAAAGTTTCCCCATGGGAAAT 1100
Query 1053 CGAACATTTAACGCCTTGGTCAAATGTT-TCCAGGTCATCTTTTCTCAAGAACAAGCGTT 1111
|||||||||||| |||| |||||||||| ||| |||||||||| ||||||||||||||||
Sbjct 1101 CGAACATTTAACTCCTTTGTCAAATGTTCTCC-GGTCATCTTTGCTCAAGAACAAGCGTT 1159
Query 1112 CACGAGAAGTTAATGAAATCGGTTCTTCCTCATCACATCTCTTGCCTCCTACATTGACAC 1171
| ||||||||||||||||||||||| | |||||||||||||||||||||| || |||||
Sbjct 1160 CCCGAGAAGTTAATGAAATCGGTTCAACATCATCACATCTCTTGCCTCCTATATCGACAC 1219
Query 1172 AAGGA-CAAGAAATTGGACAACAAAGCATG-GCCACCCCGATGAATATTTC-TCTTCGTT 1228
|| || |||||||||||||||| ||||||| | | ||||||||| ||| || | |||
Sbjct 1220 AA-GATCAAGAAATTGGACAACCAAGCATGATCTA-TCCGATGAAT-GTTCTTCCTAGTT 1276
Query 1229 ATCGTGATATTACTGAAGATGCT-ATGACTCCTTCTAGATTGCTAATGAGCTACCCTGT- 1286
|||||||| || ||||||||| | || ||||||||| |||||||| |||||||||||
Sbjct 1277 ATCGTGATGCAACAGAAGATGCTGA-GATTCCTTCTAGGTTGCTAATTAGCTACCCTGTC 1335
Query 1287 CCAACCAATGGCCAAACTAAATTACAAT---AAT---GTGGTTACACCAATAGAAGAAAA 1340
|||| ||||| ||||||||| ||||||| ||| ||||||||||| ||||| ||||
Sbjct 1336 CCAA-CAATGCCCAAACTAACTTACAATAACAATCAAATGGTTACACCACTAGAAAAAAA 1394
Query 1341 TATAACAACCAATG-CAGTCGCTAGTTTTAGGTTGTTTGGAGTCTCTCTGGCCACTCCTT 1399
|||||||||||||| ||| ||| |||| ||| |||||||||||||||| ||||||||||
Sbjct 1395 TATAACAACCAATGCCAG-CGCCAGTTGTAGACTGTTTGGAGTCTCTCTTGCCACTCCTT 1453
Query 1400 CGGTGATCAAAGATCCCGTTG---AAC-A-A---AT-T-GGCT-T-GGAGATTTCTAGAC 1447
| | ||||||||||||| ||| ||| | | || | | | | |||||||||| ||
Sbjct 1454 CAGAGATCAAAGATCCCATTGACCAACAAGACTCATATCAGATATCTGAGATTTCTAAAC 1513
Query 1448 T-TACTCAGGaaaaaaaGTTTGGTCAAAGCCAAATTTTGAGATCACCAACAGAGATCCAA 1506
| | |||| || ||||||||||||| | |||| ||| | ||| ||| ||||||||||
Sbjct 1514 TCT-CTCAAGAGAAAAAGTTTGGTCTTGGTCAAACTTTAACATCTGCAAGAGAGATCCAA 1572
Query 1507 AGCAAGCAGTTCAGTTCTACCAGAA-CTTGTACCAAAGTTCAAATGCAAGGTGTAACAAT 1565
||||||||||| |||||||| |||| | |||||||||||||||||| ||||||||||| |
Sbjct 1573 AGCAAGCAGTTAAGTTCTACTAGAAGC-TGTACCAAAGTTCAAATGGAAGGTGTAACAGT 1631
Query 1566 AGGAAGAGCTGTGGATTTAAGTGTTCTTAATGGATATGATCAGTTAATACTAGAATTGGA 1625
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1632 AGGAAGAGCTTTGGATTTAAGTGTTCTTAATGGATATGATCAACTAATACTAGAATTGGA 1691
Query 1626 GAAGCTCTTCGATCTCAAAGGCCAATTGCAAGCTCGCAACCAATGGGAAAT-AGCTTTCA 1684
||| ||||| |||||||| ||||| |||||| | ||||||||||||||||| || |||||
Sbjct 1692 GAAACTCTTTGATCTCAACGGCCAGTTGCAAACCCGCAACCAATGGGAAATAAG-TTTCA 1750
Query 1685 CAAATAATGAA-GAGGATAAGATGCTTGTTGGAGAAGATCCATGGCCTGAATTCTGCAAC 1743
| | |||||| || ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1751 TAGACAATGAAGGA-GATAAGATGTTTGTTGGAGATGATCCATGGCCTGAATTCTGCAAC 1809
Query 1744 ATGGTGAAGAAGAT-ATTCATATATTCAAAAGAGGAGGTCAAAAACTTGAAGTCCAGGAA 1802
|||||||||| ||| || ||||||| |||||||| ||||||||||||| |||||| | ||
Sbjct 1810 ATGGTGAAGAGGATTAT-CATATATACAAAAGAGAAGGTCAAAAACTTAAAGTCC-G-AA 1866
Query 1803 GAGTCTCTCAAGTTGA 1818
| |||||||| ||||
Sbjct 1867 CAATCTCTCAAATTGA 1882
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68257719040
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5