BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G43720.1 Length=945 Score E Sequences producing significant alignments: (Bits) Value Ahg897008 jgi|Araly1|897008|Al_scaffold_0005_974 717 0.0 Ahg323064 jgi|Araly1|323064|fgenesh1_pm.C_scaffold_5000608 549 1e-155 Ahg906119 jgi|Araly1|906119|Al_scaffold_0003_3247 272 3e-72 Ahg942366 jgi|Araly1|942366|scaffold_602910.1 268 4e-71 Ahg480397 jgi|Araly1|480397|fgenesh2_kg.3__3098__AT3G30520.1 268 4e-71 Ahg942982 jgi|Araly1|942982|scaffold_603526.1 215 5e-55 Ahg930940 jgi|Araly1|930940|scaffold_303397.1 215 5e-55 Ahg948313 jgi|Araly1|948313|scaffold_800200.1 150 2e-35 Ahg936855 jgi|Araly1|936855|scaffold_501046.1 148 5e-35 Ahg941964 jgi|Araly1|941964|scaffold_602508.1 145 7e-34 Ahg936220 jgi|Araly1|936220|scaffold_500411.1 111 7e-24 Ahg922892 jgi|Araly1|922892|scaffold_104173.1 93.5 3e-18 > Ahg897008 jgi|Araly1|897008|Al_scaffold_0005_974 Length=1116 Score = 717 bits (388), Expect = 0.0 Identities = 600/699 (86%), Gaps = 27/699 (4%) Strand=Plus/Plus Query 1 ATGCAACGATGTCTCGTATTACATGATGTTCAATCACAATCTCAACATTCTGCTCGTCAA 60 |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 118 ATGCAACGATGTTTCGTATTACATGATGTTCAATCACAATCTGAACACTCTGCTCGTCAA 177 Query 61 AGAAGAGAACAATTGATCCACGAGCATGGAGTTGATGAAGAAGGTGAAGATTACTCAGAC 120 |||||||||||||| || ||||||||| |||||||||||| || | ||| |||||||| Sbjct 178 AGAAGAGAACAATTAATACACGAGCATACAGTTGATGAAGAGGGCCATGATGACTCAGAC 237 Query 121 AGTGATAGTGGTAACATGCCAGAAGCCGAGGTTCCTGAAACGCAAGAAGAAGAAGAAGTG 180 | |||||||||| || || || || | |||||||||| ||||||||||||||||||||| Sbjct 238 ACTGATAGTGGTGACTTGGCACAAACAAAGGTTCCTGATACGCAAGAAGAAGAAGAAGTG 297 Query 181 TATCGTGTTACCATTGATGATGATG-AA---TC--A-A--CCGCTAGACGTGGAAG-TAG 230 ||||||||||| ||||||||||||| || || | | ||||| | |||| | Sbjct 298 TATCGTGTTACTATTGATGATGATGAAACGTTCAAATATTCCGCT--TC-CCGAAGCCAA 354 Query 231 TGCACAAAGATCT-GGAGGAAGCTCACTAGTTTCTATAGGAAGTGGTTCACGAAGAAGTC 289 ||| | |||||| ||| |||||||| ||||||||| |||||| |||||||| ||| || Sbjct 355 TGC-C-GAGATCTGGGA-GAAGCTCAAGAGTTTCTATTGGAAGTTGTTCACGAGGAAATC 411 Query 290 ATAGACG-ACAATCCTTTGAAACAACAATACAAGACAGCATCACTGGCT-TCAGAGAATT 347 ||| || | ||||||||||||||||||||||||||| |||| |||||| | |||||||| Sbjct 412 GTAGGCGAAAAATCCTTTGAAACAACAATACAAGACACCATCGCTGGCTAT-AGAGAATT 470 Query 348 CCAACGACAAAGTTTTCAACAACTTCGTCC-TGGTGCTTTTGATCAAGATGATTACGATG 406 |||| |||||||||||||||||||||| || ||||| |||||| |||||||||||||||| Sbjct 471 CCAAAGACAAAGTTTTCAACAACTTCG-CCTTGGTGGTTTTGACCAAGATGATTACGATG 529 Query 407 AATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAATCTTCCTAAGCACACTAGATTTC 466 ||||||||||||||||||||||||| || || ||| | ||||| |||||||| |||||| Sbjct 530 AATTTAAAAAGGCGGAAGCGATATTCATTGCACTAGACCTTCCCAAGCACACAAGATTTT 589 Query 467 ATTGGGCATGCATTAATGCACTTAAGGAGCTAGTATTTTGGCGTAAGTATTTGATTGATA 526 ||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | Sbjct 590 ATTGGGCATGCATTAATGCACTTAAAGAACTAGTATTTTGGCGTAAATATTTCATTGACA 649 Query 527 TAACT-GCAAGCACCGACGAGGATAAGGTCCAACTGTTAGAAGCTATGACTGGTGTTTCA 585 || || | ||||| ||||||||||| | ||||| |||||||||||||||||||| ||| Sbjct 650 TATCTAG-AAGCAGTAACGAGGATAAGCTACAACTATTAGAAGCTATGACTGGTGTCTCA 708 Query 586 CGTAACAACCAAGATGTGCCAAAACAGTTAGGTTCAAGCCATTCATTTGGGAGTCC-ACA 644 || || ||||||||||||||||||||||||||| || |||||||||||||||| || | | Sbjct 709 CGAAAAAACCAAGATGTGCCAAAACAGTTAGGTCCATGCCATTCATTTGGGAGCCCGA-A 767 Query 645 TTCAGGAGGTATATCATCTGGAAGTCCATCCTCTGTGGG 683 || ||||||| |||||| |||||||||||| ||| |||| Sbjct 768 TTTAGGAGGTCTATCATATGGAAGTCCATCTTCT-TGGG 805 > Ahg323064 jgi|Araly1|323064|fgenesh1_pm.C_scaffold_5000608 Length=1227 Score = 549 bits (297), Expect = 1e-155 Identities = 517/616 (84%), Gaps = 44/616 (7%) Strand=Plus/Plus Query 1 ATGCAACGATGTCTCGTATTACATGATGTTCAATCACAATCTCAACATTCTGCTCGTCAA 60 |||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| ||| Sbjct 277 ATGCAACGATGTTTCGTCTTATATGATGTTCAATCACAATCTCAACATTCTGCTCGCCAA 336 Query 61 AGAAGAGAACAATTGATCCACGAG----C-A-TG--G-AGTTG-ATG-AAGAAG-GTG-- 106 |||||||||||||||||| ||||| | | || | || || | | |||||| | | Sbjct 337 AGAAGAGAACAATTGATCAACGAGCATCCAATTGATGAAGATGAAAGAAAGAAGAGAGCC 396 Query 107 AAGATTACTCAGACAG-TGATAGTGGTAACATGCCAGAAGC-CGAGGTTCCTGAAACGCA 164 ||||| |||||||| | |||||||||| || |||| || | | | |||||||| ||||| Sbjct 397 AAGATGACTCAGAC-GCTGATAGTGGTGACGTGCCTCAAACAC-AAGTTCCTGAGACGCA 454 Query 165 AGAAGAAGAAGAAGTGTATCGTGTTACCA-T--TGATGATG--A--T--G----A----- 206 |||||||||||||||||| |||||||| | | |||||||| | | | | Sbjct 455 AGAAGAAGAAGAAGTGTAACGTGTTACAATTGATGATGATGAAACGTAGGCTAAATTTGC 514 Query 207 A-TCAACCGCTAGACGTGGAAGTAGTGCACAAAGATCT-GGAGGAAGCTCACTAGTTTCT 264 | ||||||||||||||||| |||||| ||||||||||| ||| ||||| || ||||||| Sbjct 515 AGTCAACCGCTAGACGTGGGAGTAGTTCACAAAGATCTGGGA-GAAGCGCAAGAGTTTCT 573 Query 265 ATAGGAAGTGGTTCACGA-AGAAGTCATAGACGACAATCCTTTGAAACAACAATACAAGA 323 || ||||||||||||||| ||| || ||| |||||||| ||||| |||||||||||||| Sbjct 574 ATTGGAAGTGGTTCACGAGGGAA-TCGTAGGCGACAATCGTTTGAGACAACAATACAAGA 632 Query 324 CAGCATCACTGGCTTCAGAGAATTCCAACGACAAAGTTTTCAACAACTTCGTCCTGGTGC 383 | ||| |||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 633 TACCATTGCTGGATACAGAGAATTCCAACGACAAAGTTTTCAACAACTTCGTCCTGGTGG 692 Query 384 TTTTGATCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAA 443 |||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||| | Sbjct 693 TTTTGACCAAGATGATTATGATGAATTTAAAAAGGCGGAAGCGATATTCATTGCGCTAGA 752 Query 444 TCTTCCTAAGCACACTAGATTTCATTGGGCATGCATTAATGCACTTAAGGAGCTAGTATT 503 ||||| |||||||| |||||| | ||||||||||||||||||||||||| |||||||| Sbjct 753 CCTTCCCAAGCACACAAGATTT--T-GGGCATGCATTAATGCACTTAAGGAACTAGTATT 809 Query 504 TTGGCGTAAGTATTTGATTGATATAACTGCAAGCACCGACGAGGATAAGGTCCAACTGTT 563 ||||||||||||||| ||||| ||| ||| ||||| ||||||||||| | ||||| || Sbjct 810 TTGGCGTAAGTATTTCATTGACATATCTGGAAGCAGTAACGAGGATAAGCTACAACTATT 869 Query 564 AGAAGCTATGACTGGT 579 |||||||||||||||| Sbjct 870 AGAAGCTATGACTGGT 885 > Ahg906119 jgi|Araly1|906119|Al_scaffold_0003_3247 Length=552 Score = 272 bits (147), Expect = 3e-72 Identities = 193/215 (90%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 295 CGACAATCCTTTGAAACAACAATACAAGACAGCATCACTGGCTTCAGAGAATTCCAACGA 354 |||||||| ||||| |||||||||||||| | |||| |||||| |||||||||||||||| Sbjct 168 CGACAATCGTTTGAGACAACAATACAAGATACCATCGCTGGCTACAGAGAATTCCAACGA 227 Query 355 CAAAGTTTTCAACAACTTCGTCCTGGT-GCTTTTGATCAAGATGATTACGATGAATTTAA 413 |||||||||||||||||||||||| || | |||||| ||||||||||| |||||||| || Sbjct 228 CAAAGTTTTCAACAACTTCGTCCTAGTTGGTTTTGACCAAGATGATTATGATGAATTGAA 287 Query 414 AAAGGCGGAAGCGATATTTATCGCGCTAAATCTTCCTAAGCACACTAG-ATTTCATTGGG 472 |||||||||||||||||| || |||||| | ||||||||||||| ||| |||| |||||| Sbjct 288 AAAGGCGGAAGCGATATTCATTGCGCTAGACCTTCCTAAGCACA-TAGGATTTTATTGGG 346 Query 473 CATGCATTAATGCACTTAAGGAGCTAGTATTTTGG 507 ||||||||||| ||| |||||| |||||||||||| Sbjct 347 CATGCATTAATACACATAAGGAACTAGTATTTTGG 381 > Ahg942366 jgi|Araly1|942366|scaffold_602910.1 Length=370 Score = 268 bits (145), Expect = 4e-71 Identities = 204/233 (88%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 390 TCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAATCTT-C 448 |||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||| | Sbjct 113 TCAAGATGATTACGATGAATTTAAAAAGGCTGAAGCGATATTCATTGCGCTAAACCTTTC 172 Query 449 CTAAGCACACTAGATTTCATTGGGCATGCATTAATGCACTTAAGGAGCTAGTATTTTGGC 508 | || |||||||||||| ||||| ||||||||| | |||| ||||||| ||||||||||| Sbjct 173 CAAA-CACACTAGATTTTATTGGACATGCATTAGTACACTCAAGGAGCAAGTATTTTGGC 231 Query 509 GTAAGTATTTGATTGATATAACTGCAAGCACCGACGAGGATAAGGTCCAACTGTTAGAAG 568 |||||||||| ||||| ||| ||| ||||||||| ||||||||| | |||||||||||| Sbjct 232 GTAAGTATTTCATTGACATAGCTGAAAGCACCGATGAGGATAAGCTACAACTGTTAGAAA 291 Query 569 CTATGACTGGTGTTTCACGTAACAACCAAGATGTGCCAAAACAGTTAGGTTCA 621 ||||||| ||||||| ||| |||||| || ||||| || ||||| |||||||| Sbjct 292 CTATGACGGGTGTTTTACGGAACAACAAAAATGTGTCACAACAGGTAGGTTCA 344 > Ahg480397 jgi|Araly1|480397|fgenesh2_kg.3__3098__AT3G30520.1 Length=1101 Score = 268 bits (145), Expect = 4e-71 Identities = 174/188 (93%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 322 GACAGCATCACTGGCT-TCAGAGAATTCCAACGACAAAGTTTTCAACAACTTCGTCCTGG 380 |||| |||| |||||| | ||||||||||||||||||||||||||| ||||||| ||||| Sbjct 448 GACACCATCGCTGGCTAT-AGAGAATTCCAACGACAAAGTTTTCAATAACTTCGCCCTGG 506 Query 381 TGCTTTTGATCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCT 440 || |||||| ||||||||||||||||||||||||||||||||||||||||| || || || Sbjct 507 TGGTTTTGACCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTCATTGCACT 566 Query 441 AAATCTTCCTAAGCACACTAGATTTCATTGGGCATGCATTAATGCACTTAAGGAGCTAGT 500 ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 567 AAATCTTCCCAAGCACACTAGATTTTATTGGGCATGCATTAATGCACTTAAAGAGCTAGT 626 Query 501 ATTTTGGC 508 |||||||| Sbjct 627 ATTTTGGC 634 Score = 134 bits (72), Expect = 2e-30 Identities = 111/130 (85%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 79 CACGAGCATGGAGTTGATGAAGAAGGTGAAGATTACTCAGACAGTGATAGTGGTAAC-AT 137 |||||||||| |||||||||||| || | ||| ||||| ||| ||||| |||| || | Sbjct 199 CACGAGCATGCAGTTGATGAAGAGGGCCATGATGACTCATACACTGATAATGGTGACTTT 258 Query 138 GCCAGAAGCCGAGGTTCCTGAAACGCAAGAAGAAGAAGAAGTGTATCGTGTTACCATTGA 197 | || || | |||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 259 G-CACAAACAAAGGTTCCTGAGACGCAAGAAGAAGAAGAAGTGTATCGTGTTACTATTGA 317 Query 198 TGATGATGAA 207 |||||||||| Sbjct 318 TGATGATGAA 327 Score = 128 bits (69), Expect = 7e-29 Identities = 150/187 (80%), Gaps = 13/187 (7%) Strand=Plus/Plus Query 761 TGGAAAACACCA-CCAA--ATGCACAGT-GGGACACGCCACCAAATGTTCCACAGTGGGG 816 |||| ||||||| |||| |||||||| |||| || ||| ||||| |||||| ||||| Sbjct 765 TGGAGAACACCACCCAATGTTGCACAGTGGGGA-ACAACACAAAATGCTCCACAATGGGG 823 Query 817 ATCATCACCAAAGGCTCCACAATGGCGGCAAACA-GA-AAAAT-TTTAACAAGGTGGTTC 873 | || |||||| |||||||| ||| || |||| | |||| | || | |||| || Sbjct 824 AACACCACCAACTGCTCCACAGTGG-GG--AACACCACCAAATACTCCAC-A-GTGGGTC 878 Query 874 AAGCGGAACGACTCCAACAAATGTTCAATATGGATTTTCAGTTGGAAGTCAAGGAGATTG 933 || |||||| |||||||||||||||||||||||||||||||||||| | ||||||||| | Sbjct 879 AACCGGAACAACTCCAACAAATGTTCAATATGGATTTTCAGTTGGAGGCCAAGGAGATGG 938 Query 934 TGTAACA 940 || |||| Sbjct 939 TGCAACA 945 Score = 80.5 bits (43), Expect = 2e-14 Identities = 45/46 (98%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 1 ATGCAACGATGTCTCGTATTACATGATGTTCAATCACAATCTCAAC 46 |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 151 ATGCAACGATGTTTCGTATTACATGATGTTCAATCACAATCTCAAC 196 > Ahg942982 jgi|Araly1|942982|scaffold_603526.1 Length=356 Score = 215 bits (116), Expect = 5e-55 Identities = 200/241 (83%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 388 GAT-CAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAATCT 446 ||| |||||||||||||||||||||||||||||||||| |||||| || |||||| | || Sbjct 93 GATCCAAGATGATTACGATGAATTTAAAAAGGCGGAAGAGATATTCATTGCGCTAGACCT 152 Query 447 TCCTAAGCACACTAGATTTCATTGGGCATGCATTAA-TGCACTTAAGGAGCTAGTATTTT 505 |||||| | ||||||||| | ||| ||| ||| || | |||||||||||| || ||| | Sbjct 153 TCCTAAATATACTAGATTTTACTGGACATACAT-AAGTACACTTAAGGAGCAAGCATTAT 211 Query 506 GGCGTAAGTATTTGATTGATATAACTGCAAGCACCGACGAGGATAAGGTCCAACTGTTAG 565 ||||||||||||| ||||| ||| ||| ||||||||| || ||||| | |||||| ||| Sbjct 212 GGCGTAAGTATTTCATTGACATAGCTGAAAGCACCGATGAAAATAAGCTACAACTGCTAG 271 Query 566 AAGCTATGACTGGTGTTTCACGTAACAACCAAGATGTGCCAAAACAGTTAGGTTCAAGCC 625 || |||| |||||||||| ||| || ||| || || ||| | |||| |||||||||| || Sbjct 272 AAACTATAACTGGTGTTTTACGGAATAACGAATATATGCGAGAACAATTAGGTTCAAACC 331 Query 626 A 626 | Sbjct 332 A 332 > Ahg930940 jgi|Araly1|930940|scaffold_303397.1 Length=356 Score = 215 bits (116), Expect = 5e-55 Identities = 200/241 (83%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 388 GAT-CAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAATCT 446 ||| |||||||||||||||||||||||||||||||||| |||||| || |||||| | || Sbjct 93 GATCCAAGATGATTACGATGAATTTAAAAAGGCGGAAGAGATATTCATTGCGCTAGACCT 152 Query 447 TCCTAAGCACACTAGATTTCATTGGGCATGCATTAA-TGCACTTAAGGAGCTAGTATTTT 505 |||||| | ||||||||| | ||| ||||||| || | |||||||||||| || ||| | Sbjct 153 TCCTAAATATACTAGATTTTACTGGACATGCAT-AAGTACACTTAAGGAGCAAGCATTAT 211 Query 506 GGCGTAAGTATTTGATTGATATAACTGCAAGCACCGACGAGGATAAGGTCCAACTGTTAG 565 ||||||||||||| ||||| ||| ||| ||||||||| || ||||| | |||||| ||| Sbjct 212 GGCGTAAGTATTTTATTGACATAGCTGAAAGCACCGATGAAAATAAGCTACAACTGCTAG 271 Query 566 AAGCTATGACTGGTGTTTCACGTAACAACCAAGATGTGCCAAAACAGTTAGGTTCAAGCC 625 || ||| |||||||||| ||| || ||| || || ||| | |||| |||||||||| || Sbjct 272 AAATTATAACTGGTGTTTTACGGAATAACGAATATATGCGAGAACAATTAGGTTCAAACC 331 Query 626 A 626 | Sbjct 332 A 332 > Ahg948313 jgi|Araly1|948313|scaffold_800200.1 Length=249 Score = 150 bits (81), Expect = 2e-35 Identities = 117/135 (87%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 390 TCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAATCTTCC 449 |||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||| | Sbjct 112 TCAAGATGATTATGATGAATTTAAAAAGGCGGAAGCGATATTCATTGCGCTAAACCTTTC 171 Query 450 TAAGCACACTAGATTTCATTGGGCATGCATTAATGCACTTAAGGAGCTAGTATTTTGGCG 509 ||| || ||||||||| ||||| ||||||| | | |||| || |||| |||| ||| ||| Sbjct 172 TAAACATACTAGATTTTATTGGACATGCATCAGTACACTCAAAGAGCAAGTACTTTAGCG 231 Query 510 TAAGTATTTGATTGA 524 ||||||||| ||||| Sbjct 232 TAAGTATTTCATTGA 246 > Ahg936855 jgi|Araly1|936855|scaffold_501046.1 Length=242 Score = 148 bits (80), Expect = 5e-35 Identities = 126/148 (85%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 388 GAT-CAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAATCT 446 ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| | || Sbjct 96 GATCCAAGATGATTACGATGAATTTAAAAAGGCGGAAGAGATATTTATTGCGCTAGACCT 155 Query 447 TCCTAAGCACACTAGATTTCATTGGGCATGCATTAA-TGCACTTAA-GGAGCTAGTATTT 504 |||||| | ||||||||| | || ||||||| || | ||||||| ||||| || ||| Sbjct 156 TCCTAAATATACTAGATTTTACAGGACATGCAT-AAGTACACTTAAAGGAGCAAGCATTA 214 Query 505 TGGCGTAAGTATTTGATTGATATAACTG 532 |||||||||||||| ||||| ||| ||| Sbjct 215 TGGCGTAAGTATTTCATTGACATAGCTG 242 > Ahg941964 jgi|Araly1|941964|scaffold_602508.1 Length=247 Score = 145 bits (78), Expect = 7e-34 Identities = 116/135 (86%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 390 TCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAATCTTCC 449 |||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||| | Sbjct 110 TCAAGATGATTATGATGAATTTAAAAAGGCGGAAGCGATATTCATTGCGCTAAACCTTTC 169 Query 450 TAAGCACACTAGATTTCATTGGGCATGCATTAATGCACTTAAGGAGCTAGTATTTTGGCG 509 ||| || ||||||||| ||||| |||| || | | |||| || |||| |||| ||| ||| Sbjct 170 TAAACATACTAGATTTTATTGGACATGTATCAGTACACTCAAAGAGCAAGTACTTTAGCG 229 Query 510 TAAGTATTTGATTGA 524 ||||||||| ||||| Sbjct 230 TAAGTATTTCATTGA 244 > Ahg936220 jgi|Araly1|936220|scaffold_500411.1 Length=213 Score = 111 bits (60), Expect = 7e-24 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 390 TCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAATCTTCC 449 |||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||| | Sbjct 112 TCAAGATGATTATGATGAATTTAAAAAGGCGGAAGCGATATTCATTGCGCTAAACCTTTC 171 Query 450 TAAGCACACTAGATTTCATTGGGCATGCAT 479 ||| || ||||||||| ||| | ||||||| Sbjct 172 TAAACATACTAGATTTTATTAGACATGCAT 201 > Ahg922892 jgi|Araly1|922892|scaffold_104173.1 Length=199 Score = 93.5 bits (50), Expect = 3e-18 Identities = 79/93 (85%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 388 GAT-CAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCTAAATCT 446 ||| ||||||||||||||||||||||||||||| |||| |||||| || ||| || | || Sbjct 95 GATCCAAGATGATTACGATGAATTTAAAAAGGCAGAAGAGATATTCATTGCGTTAGACCT 154 Query 447 TCCTAAGCACACTAGATTTCATTGGGCATGCAT 479 |||||| || ||||||||| | | | ||||||| Sbjct 155 TCCTAAACATACTAGATTTTACTAGACATGCAT 187 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35073083640 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5