BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G44120.1
Length=6345
Score E
Sequences producing significant alignments: (Bits) Value
Ahg336766 jgi|Araly1|336766|fgenesh1_pg.C_scaffold_1003331 9280 0.0
Ahg338989 jgi|Araly1|338989|fgenesh1_pg.C_scaffold_2001088 990 0.0
> Ahg336766 jgi|Araly1|336766|fgenesh1_pg.C_scaffold_1003331
Length=6333
Score = 9280 bits (5025), Expect = 0.0
Identities = 5925/6363 (93%), Gaps = 48/6363 (1%)
Strand=Plus/Plus
Query 1 ATGACGTCTGAGATGGATGATCCAGAGAAAGCAGCGGTTACAATCACACGTCTCATCGAA 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGACGTCCGAGATGGATGATCCAGAGAAAGCAGCGGTTACAATCACACGTCTCATCGAG 60
Query 61 CAGCTTCATGCCAAGAAATCATCGGCGCAAGAGAAAGAGCTTAGCACCGCTCGGCTTCTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CAGCTTCATGCCAAGAAATCATCGGCGCAAGAGAAAGAGCTTAGCACCGCTCGGCTTCTT 120
Query 121 GGTTTAGCCAAGGGTAAAAAGGAATGTAGAAAGATCATTAGCCAGAATGTGAACGCCATG 180
|||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||
Sbjct 121 GGTTTAGCCAAGGGTAAAAAAGAATCTAGAAAGATCATTAGCCAGAACGTGAACGCCATG 180
Query 181 CCTGCCTTTATATCACTTCTTAGGAGTGGAACCCTCTTGGCAAAACTCAATTCCGCTTCA 240
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 181 CCTGCCTTTATATCACTTCTCAGGAATGGAACCCTCTTGGCAAAACTCAATTCCGCTTCA 240
Query 241 GTCCTAACCGTTCTATGCAAAGACAAAAACGTTCGTTCT-AAGATACTGATAGGCGGATG 299
||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 241 GTCCTGACCGTTCTATGCAAAGACAAAAACGTTCGTTCTAAAG-TACTGATAGGCGGATG 299
Query 300 TATCCCACCGCTGCTATCACTTTTGAAGTCTGACTCTGTGGATGCAAAAAGAGTTGTAGC 359
||||| ||| || | ||||||||||| |||||||| |||||||||| ||||| || ||
Sbjct 300 CATCCCGCCGTTGTTGTCACTTTTGAAATCTGACTCGGTGGATGCAAGAAGAGCTGCGGC 359
Query 360 CGAGGCCATATATGAAGTTTCCTTGTGTGGAATGGATGGTGATAATGTAGGTACTAAAAT 419
||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||
Sbjct 360 CGAGGCCATATATGAAGTTTCCTTGTGTGGACTGGATGGTGATAGTGTAGGCACTAAAAT 419
Query 420 ATTTGTCACGGAAGGCGTGGTACCGAGTTTGTGGGATCAATTAAAGACGGGGAAAAAACA 479
||||||||| |||||||||||||||| |||||||||||| ||||||||| |||||| ||
Sbjct 420 ATTTGTCACAGAAGGCGTGGTACCGAATTTGTGGGATCAGTTAAAGACGAAGAAAAAGCA 479
Query 480 GGACAAGACAGTGGAAGGACATTTGGTTGGAGCTTTGAGAAATCTTTGCGGTGATAAAGA 539
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 480 GGACAAGACAGTGGAAGGACATTTGGTTGGGGCTTTGAGAAATCTTTGCGGTGATAGAGA 539
Query 540 CGGGTTTTGGGC-ATTAACACTTGAAGATGGCGGAGTAGATATCATCTTAAAGCTTCTCC 598
|||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||| |
Sbjct 540 CGGGTTTTGGGCAATT-ACACTTGAAGATGGTGGAGTCGATATCATCTTAAAGCTTCTAC 598
Query 599 AGTCTAGTAACCCGGTATCTCAATCAAACGCAGCTTCTCTCTTAGCTCGTCTTATCAGGA 658
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct 599 AGTCTAGTAACCCGGTATCTCAATCAAACGCAGCTTCTCTCTTAGCCCGTCTTATTAGAA 658
Query 659 TTTTTACCAGCAGTATCTCAAAAGTTGAAGAGTCAGGTGCTGTGCAAGTTCTGGTTCAGC 718
|||| || || || ||||||||| | | ||||||||||||||||||||||||||||| ||
Sbjct 659 TTTTCACTAGTAGCATCTCAAAAATAGTAGAGTCAGGTGCTGTGCAAGTTCTGGTTCCGC 718
Query 719 TTCTAGGTGAAGAAAATAGTGTTTTCGTACGTGCCAGTGTAGTCAACGCTCTAGAAGCCA 778
|||||||||| ||||| || |||||||||||||||||||||||||| ||| |||||||||
Sbjct 719 TTCTAGGTGAGGAAAACAGCGTTTTCGTACGTGCCAGTGTAGTCAATGCTATAGAAGCCA 778
Query 779 TCACATCAAAGTCAGAAGAAGCTATAACTGTGGCAAGAGATTTAGATGGGATCCACCTTC 838
| ||| | || ||||| || ||||||||||||||| ||||||||||||||||
Sbjct 779 T--CAT---A-TC------AGCTAAAATTGTGGCAAGAGATTTGGATGGGATCCACCTTC 826
Query 839 TTATTAGCGCAGTGGTTGCATCTTCTAAAGAGTCAGTGGAGGAGGAAACTGAACGCGTCT 898
| |||||| |||||||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct 827 TGATTAGCACAGTGGTTGCTTCGTCTAAAGAGTCAGTGGATGAGGAAACTGAACGCGTCT 886
Query 899 TACAAAGTTATGGGACACAAGCTTTAGCAAACTTATGCGGAGGAATGTCTGGTTTGATAG 958
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 887 TACAAAGTTATGGGACACAAGCTTTAGCAAATTTATGCGGAGGAATGTCTGGTTTGATAG 946
Query 959 TGTATCTTGGAGGGCTATCTTTGTCTCCACGCCTCACTGAGCCCATCGCTGATATTCTTG 1018
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 947 TGTATCTTGGAGGGCTATCATTGTCTCCACGCCTCACTGAGCCCATCGCTGATATTCTTG 1006
Query 1019 GAGCTCTTGCTTATGCTCTGAGAAAATTTCAGCTAAGTTGCGGTGATACTAGAGAAGCTT 1078
||||| |||||||||||||||| || |||||||||||||| |||||| |||||||| |||
Sbjct 1007 GAGCTGTTGCTTATGCTCTGAGGAAGTTTCAGCTAAGTTGTGGTGATGCTAGAGAAACTT 1066
Query 1079 TTGATCCAACACTAACAGAAGGAATACTAGTGAAACTACTAAAGCCCCGGGATACTCAAT 1138
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 1067 TTGATCCAACACTAACAGAAGGAATACTAGTGAAACTATTGAAGCCCCGGGATACTCAAT 1126
Query 1139 TGATCCACGAACGTATCTTGGAGGCTATGGAAAGTCTATTCGGAAATGTTGATCTATCAA 1198
||||||| |||||||||||||||||||||| |||||||| |||||| | |||||||||||
Sbjct 1127 TGATCCAAGAACGTATCTTGGAGGCTATGGCAAGTCTATACGGAAACGCTGATCTATCAA 1186
Query 1199 AACTACTCAACAATGTTGACGCTAAGAGGGTTTTAGTCT-GTCTAACAATATTGGCCACG 1257
|| ||||||||||||| || ||||||||||||||||| | |||||||||| ||||||||
Sbjct 1187 AATTACTCAACAATGTGGAGGCTAAGAGGGTTTTAGT-TGGTCTAACAATCTTGGCCACA 1245
Query 1258 GAC-GGTCCACGTGAGCGGATGATTACTTGTTTGTCAAATTTATGCAAGCATGGTG-ATG 1315
| | |||||||| ||||||||||| ||||||||||||||||||||||| ||||| | |||
Sbjct 1246 G-CTGGTCCACGCGAGCGGATGATAACTTGTTTGTCAAATTTATGCAAACATGG-GAATG 1303
Query 1316 TTTGGGATGCTATTGGGAAGAGAGAAGGGATACAAATCCTCATACCGTACCTTGGTTTGT 1375
|||||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||
Sbjct 1304 TTTGGGATGCTATTGGGAAGAGAGAAGGAATCCAAATCCTCATACCGTATCTTGGGTTGT 1363
Query 1376 CTAGCGAACAACATCAAGAACTGTCTGTTGAGTTCTTAGCGATCTTGACCGATAATGTCG 1435
| ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct 1364 CCAGCGAACAACATCAAGAACTGTCTGTTGAGTTCTTAGCGATCTTGACTGACAAGGTCG 1423
Query 1436 AAGAAAGTAGATGGGCTGTTACTTCTGCAGGTGGGATTCCTCCATTATTGCAGATATTAG 1495
||||||||||||||||||||||||||||||| || |||||||||||||| |||||| |||
Sbjct 1424 AAGAAAGTAGATGGGCTGTTACTTCTGCAGGCGGAATTCCTCCATTATTACAGATACTAG 1483
Query 1496 AGACTGGTGTATCTCAGAAAGCAAAGGACGATGCGGTCCGTGTAATTTTGAACCTATGTT 1555
|||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 1484 AGACTGGTGTGTCTCAAAAAGCAAAGGAGGATGCGGTCCGTGTAATTTGGAACCTATGTT 1543
Query 1556 GTCACAGCGAAGAAATCCGCCTCTGCGTTGAGAAAGCAGGAGCTATTCCTGCACTTTT-G 1614
|||||||||| ||||| || || || || |||||||||||||||||||| |||||||| |
Sbjct 1544 GTCACAGCGAGGAAATTCGTCTATGTGTGGAGAAAGCAGGAGCTATTCCCGCACTTTTAG 1603
Query 1615 GGTCTTTTAAAGAACGGTGGACCAAAATCACAAGAGAGCTCAGCAAATACGCTTTTGAAA 1674
|| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1604 GG-CTTCTAAAGAACGGTGGACCAAAATCCCAAGAGAGCTCAGCAAATACGCTTTTGAAA 1662
Query 1675 CTGATTAAAACAGCTGATCCAAGTGTTATCGAGCAAGTACAGGCTTTGTTTCTTGGAGAT 1734
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1663 CTGATTAAAACAGCTGATCCAAGAGTTATCGAGCAAGTACAGGCTTTGTTTCTTGGAGAT 1722
Query 1735 GCTCCTAAATCAAAGACTCATTTGATTAGAGTTCTAGGCCATGTTCTTGCATCGGCTTCT 1794
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1723 GCTCCTAAATCAAAGGCTCATTTGATAAGAGTTCTAGGCCATGTTCTTGCATCGGCTTCT 1782
Query 1795 TTGGAAGAATTTGTCACCAAGGGTTCCGCAGCGAATAATGGATTGAGGTCGCTTGTCCAG 1854
||||| || ||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct 1783 TTGGAGGATTTTGTCACCAAGGGTTCTGCAGCTAATAATGGATTGAGGTCTCTTGTCCAG 1842
Query 1855 AGACTTGCCTCATCAAACGAGAAGATGAAAGAGAACGCAGCTTCTGTCTTGGCTGATCTA 1914
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1843 AGACTTGCCTCTTCAAACGAGAAAATGAAAGAGAACGCAGCTTCTGTCTTGGCTGATCTA 1902
Query 1915 TTCAGTTCAAGAAAAGACCTTTGTGGTGGTCTTGGATTTGATGAGGATGACAATCCGTGC 1974
|| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1903 TTTAGTTCAAGAAAAGACCTTTGTGGCGGTCTTGGATTTGATGAGGATGATAATCCGTGC 1962
Query 1975 ACAAAGCTTTTAAGCGGAAACACTCACGCTGTTGCAACGCAGTTAGCGCATGCCTTGGGC 2034
|||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 1963 ACAAAGCTTTTAAGTGGAAACACTCACGCAGTTGCAACGCAGTTAGCGCATGCCCTGGGC 2022
Query 2035 TCTCTATCTAATCCAACAAAGaaaaaaaCT-GCAACAAAGAAATTATCCGGTCCAGAAGT 2093
|||||||| ||||||||||||||||||||| || ||||||| |||||||||||||||||
Sbjct 2023 TCTCTATCCAATCCAACAAAGAAAAAAACTGGC-CCAAAGAAGTTATCCGGTCCAGAAGT 2081
Query 2094 CGAAGTGATCAAACCATTGATAAAGTCAGCAAAAACAAACCCCATCGAGTCAACAGAGAA 2153
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2082 CGAAGTGATCAAACCATTGATAAAGTCAGCAAAAACAAACCCAATCGAGTCAACAGAGAA 2141
Query 2154 TCCCATGTCCACTCTTGCGAACCTTCTTTCAGACCCAAATGTTGCAGCTGAAGCATTAAA 2213
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct 2142 TCCCATGTCCACTCTTGCGAACCTTCTTTCTGACCCAAATGTTGCAGCCGAAGCGTTAAA 2201
Query 2214 CGATGACGTTGTTTCTGCTTTGACCAGAGTACTGAGAGAGGGAACACTGCAAGGTAAAAG 2273
||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 2202 TGATGATGTTGTTTCTGCTTTGACTAGAGTACTGAGAGAAGGAACACTGCAAGGTAAGAG 2261
Query 2274 AAATGCTTCACATGCTCTTCATCAATTACTCAAGCATTTTCAAGTCAGTGATGTATTTAA 2333
|||||||||||||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct 2262 AAATGCTTCACATGCTCTTCATCAATTACTGAAGCATTTCCAGGTCAGTGATGTGTTCAA 2321
Query 2334 AGGAAATGAGCAGTGTCGATTTGCTGTTTCTGAACTCATTGATCTCTTAAACGCAACTGA 2393
|||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2322 AGGAAACGACCAATGTCGATTTGCTGTTTCTGAACTCATTGATCTCTTAAACGCAACTGA 2381
Query 2394 CCTGAACAACAGCGCTTTCATCGACGTCTTAGAAGTACTCTCTTTACTAGCCAAAGCTAA 2453
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2382 CCTGAACAATAGCGCTTTCATCGACGTCTTAGAAGTACTCTCTTTACTAGCCAAAGCTAA 2441
Query 2454 ATATGGTGCTAACTTGTCACATAACCCTTTTTCTGCATTCGGTGAAGTTCCTTCAAATTT 2513
|||||||||||||||||| |||||||| ||||||||||||| || |||||||||||||||
Sbjct 2442 ATATGGTGCTAACTTGTCCCATAACCCCTTTTCTGCATTCGCTGGAGTTCCTTCAAATTT 2501
Query 2514 AGACTCTCTTGTCCGCGGTTTAGCTGAAGGTCATCCTTTGGTGCAAGATAAAGCAATAGA 2573
||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||
Sbjct 2502 AGACTCTCTTGTCCGCGGTGTGGCTGAAGGTCATCCATTGGTGCAAGATAAAGCAATAGA 2561
Query 2574 GATTTTGTCTCGTTTCTGCAAGACACAATTTATCTTGTTAGGTCGACTTTTGGTGACACA 2633
|||||||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||
Sbjct 2562 GATTTTGTCTCGCTTCTGCAAGACACAGTTTGTCTTGTTAGGTCAACTTTTGGTGACACA 2621
Query 2634 ATCAAAATCAATTTCTTCATTGGCTAACAGAACAATCAACTCATCAAGTCCTGAAATCAA 2693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2622 ATCAAAATCAATTTCTTCATTGGCTAACAGAACAATCAACTCATCAAGTCCTGAAATAAA 2681
Query 2694 AGTTGGAGGAGCGAT-CTTGCTTGTGTGCGCAGCAAAGAACGACATTACATTATGGGCGG 2752
||| ||||| || || | |||||||||| |||||||||||||| | | |||||||||||
Sbjct 2682 AGTCGGAGGGGCTATGC-TGCTTGTGTGTGCAGCAAAGAACGATAAGAAATTATGGGCGG 2740
Query 2753 AAGCGGTTGAAC-AATCAGGGTATTTGAAAACCTTAGTAAACACTCTTCTTGATATGTCA 2811
|||| |||||| || ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2741 AAGCAATTGAACGAA-CAGGGTATTTGAAAAGCTTAGTAAACACTCTTCTTGATATGTCA 2799
Query 2812 AAGCAGAACTCTAAATCTGCTTCATATGGAATTGAAATTCAAAGACCAAGATCTTTTATT 2871
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2800 AAGCAGAACTCTAAATCTGCTTCATATGGAATTGAAATTCAAAGACCAAGATCTTTCATT 2859
Query 2872 ACAAGCAATTTGTGCTTAAGGATGGATGACTCTGAAATGGTTGATCCAGTTACTATCTTG 2931
|||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||
Sbjct 2860 ACAATCAATTTGTGCTTACGGATGGATGACTCCGAAATGGTTGATCCAGTTACTGTCTTG 2919
Query 2932 GGAAGCACCGCCTCTATGTGGTTACTCTCCATTATTTGCTCTTCTCATCCTTCGAACAGA 2991
|||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2920 GGAAGCACCGTCTCAATGTGGTTACTCTCCATTATTTGCTCTTCTCATCCTACGAACAGA 2979
Query 2992 CTTGTTGTCATGGAAGGCAATGGACTTGAAATTATTGCAGAAAATCTTCAAAGAAACAAG 3051
||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2980 ATTGTTGTCATGGAAGCCAATGGACTTGAAATTATTGCAGAAAAGCTTCAAAGAAACAAG 3039
Query 3052 TCTAACACACAGGAGAATTCCTCTGATTCCGAGGAAAAATGGATCGCTATGTCATTTTTA 3111
|| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||
Sbjct 3040 TCCAACACACAGGAGAATACCTCAGATTCCGAGGAAAAATGGATTGCTATGTCATTCTTA 3099
Query 3112 GCTGTTATGTCTCAGGAACCAAAGGTTGTCTCATCTCCAGCAACAGAAAATATTTTGCAA 3171
||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
Sbjct 3100 GCTGTTATGTCTCAGGAACCAAACGTTGTCTCATCTCCAGCAACAGAAAATCTTTTGCCA 3159
Query 3172 ACGCTAGCACCTTTCATGCAATCTGAGCAGATGATTGATGGATATTTTACTGCACAAGTG 3231
|| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 3160 ACACTAGCACCTTTCATGCAATCTGATCAGATGATTGACGGATATTTTACTGCACAAGTG 3219
Query 3232 TTAGCAGCGTTAGTTCGTCATAAGAATGATA-AAACAATTTCAGAAATCATGAATTCAGA 3290
|| |||| ||||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct 3220 TTGGCAGGGTTAGTTCGTCATAAGAATGATAGGATC-ATTTCAGAAATCATGAATTCAGA 3278
Query 3291 TATCGTAGAAACTACGATAAACTTGGTAGGGTGTGAAGAATCAGACACAAGGAGTCTTTG 3350
||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||
Sbjct 3279 TATCGTAGAAACTACGATAAACTTGGTAGGGTGTGCGGAATCAGACACAGGGAGTTTTTG 3338
Query 3351 TGCCTTAGCAGAAGAGCTATCTCTGGTACAAAATCCTTATGAGGCCACATTAGAGGTACT 3410
|||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||
Sbjct 3339 TGCCTTAGCAGAAGAGCTATCTCTGGTACAAAATCCTTTTGAGGCCACTTTAGCGGTACT 3398
Query 3411 CTTTGAAAATGAAAGAGTAAGAAGCGGTTCATTTACCAAAAAATGTATTCCCTTGCTCGT 3470
||| ||| |||||||||||||| | |||||||||||||||||||||||||| ||||| ||
Sbjct 3399 CTTCGAAGATGAAAGAGTAAGACGTGGTTCATTTACCAAAAAATGTATTCCGTTGCTGGT 3458
Query 3471 GAATCTCTTGAAGCCATATGCAGATAAAGTTGGAGGCATTCCAGTGGCTATTCGACTTCT 3530
||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||
Sbjct 3459 GAATCTCTTGAAGCCATATGCAGATAAAGCTGGAGCCATTCCAGTGGCTGTTCGGCTTCT 3518
Query 3531 TCGTCGTATTGCAGACAATGACGATTTAAGTAAATTACTTATCGCTGAAGCTGGAGCTCT 3590
| ||||||||||||| || |||| ||||||||||| ||||||||| |||||||||||
Sbjct 3519 TAGTCGTATTGCAGAGTGTGGTGATTCAAGTAAATTACATATCGCTGACGCTGGAGCTCT 3578
Query 3591 AGATGCTTTAGCAAAGTACCTTTCTTTGAGCCCTCAAGATTCAACAGAGATTACCGTTTC 3650
||| ||||||| ||||||||||||||||| ||||||||||| || ||||| | |||||
Sbjct 3579 GGATACTTTAGCGAAGTACCTTTCTTTGAGTCCTCAAGATTCGACTGAGATCATTGTTTC 3638
Query 3651 TGAACTGTTAGAATCACTCTTTCGCAGCCCGGAAATCACACGACATAAAACAGCTATAAG 3710
|||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct 3639 TGAACTGTTAGAATCACTCTTTCGCAGCCCAGAAATCACACGGCACAAAACAGCTATAAG 3698
Query 3711 TTCCATGAAGCAGCTCATAGGAATTCTTCATCTTGCTTCTAGAAGTACTCGCTACAATGC 3770
|||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||
Sbjct 3699 TTCCATGAAGCAGCTCATAGGAATTCTTAATCTTGCTTCTCGAAGTACCCGCTACAATGC 3758
Query 3771 TGCAAGGGTCCTCTGTGAACTGTTTAGCTCTGAGCACATCAGAGATTCTGAATTAGCATG 3830
||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 3759 TGCAAGGGTGCTCTGTGAACTTTTTAGCTCTGAGCACATCAGAGATTCCGAATTAGCATG 3818
Query 3831 GAAAGCACTTTCTCCTCTTATTGAAATGTTGAATACAACGTTAGAGAGTGAGAGAGTAGC 3890
|||||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 3819 GAAAGCACTTTCCCCTCTTATTGAAATGTTGAATACAACATTGGAGAGTGAGAGAGTGGC 3878
Query 3891 TGCTCTAACAGCTTTAGTGAAGCTAACTATGGGAATAAATCCAAGGCCAGATATTCTTAC 3950
||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||
Sbjct 3879 TGCTCTAACAGCTTTAGTGAAGCTAACTATGGGAACAAGTCCAAGGTCAGATATTCTTAC 3938
Query 3951 TAGTCTTGAAGGAAACCCATTGGACAACATCTACAAAATTTTGTCTTT-AGATAGTTCTT 4009
|||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| |
Sbjct 3939 TAGTCTTGAAGGAAACCCATTGGACAACATTTACAAAATTTTAT-TTTCAGATAGTTCCT 3997
Query 4010 CGCTTGAATCAAAGACAAGTGCTGCAAGGATATGCCGCTTTCTATTTACCAATGAAGGTT 4069
| ||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||| |||
Sbjct 3998 CACTTGAATTAAAGACAAGTGCTGCGAGGATATGTCGCTTTCTATTCACCAGCGAATGTT 4057
Query 4070 TGAGAACAAGCACATCTGCCGCATGTTGCATTGTAT-CCCTTATATCACTTATCCGAACA 4128
||||||||||| | || ||||| ||||||| || | |||||||||| ||| |||| ||
Sbjct 4058 TGAGAACAAGCTCGTCCACCGCAGGTTGCATGGT-TCCCCTTATATCTCTTGTCCGGTCA 4116
Query 4129 GGAAAAAGTACA-GCTATAGAAGCCGGAATGTTTGCACTAGACAGACTCTTGGATATCAA 4187
||| ||| ||| | |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 4117 GGAGCAAGCACATG-TATAGAAGCCGGAATGTTTGCACTTGACAGACTCTTGGATATCAA 4175
Query 4188 AAGATTTGT-AGAGGTTGCAGAAGAACATGATTGTGTGAACCTGTTCTACGGATATGTGG 4246
|||| || | |||||| || |||||| ||||||||||||| ||||||| ||| | |||||
Sbjct 4176 AAGA-TTCTCAGAGGTCGCCGAAGAATATGATTGTGTGAATCTGTTCTTCGGCTTTGTGG 4234
Query 4247 CTTCCGAAAACTATCTGATCAGTGAGGCTGCAATTTCTTGTCTTACGAAAATGGCTAAAG 4306
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 4235 CTTCCGAAAACTATCTGATCAGTGAGGCTGCAATTTATTGTCTTATGAAAATGGCTAAAG 4294
Query 4307 ACAATACTCCCCGGAAAATGGATCTGATTAAAATGGGGATAATCGAGAAATGTATTAGCC 4366
|||| |||||||| |||||||||||||||||||||||||||||||||||||| || | |
Sbjct 4295 ACAACACTCCCCGTAAAATGGATCTGATTAAAATGGGGATAATCGAGAAATGCCTTGGTC 4354
Query 4367 AACTCTCCAAATCGCCGCCAAGTTCTTTGTGTTCTGTAATCGCAGA-TCTTTTCAGAGTT 4425
||||||||| ||| || ||||||||||||||||||||||||||||| | |||||||||||
Sbjct 4355 AACTCTCCAGATCTCCTCCAAGTTCTTTGTGTTCTGTAATCGCAGAGT-TTTTCAGAGTT 4413
Query 4426 TTGACGAACGTTGGTGTTATAGCTCGAAGCCAAGACGCTATAAAAATGGTACAACCGCTC 4485
|||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||
Sbjct 4414 TTGACGAACGTTGGTGTTGTAGCTAGAAGCCAAGAGGCTATAAAAATGGTACAACCGCTT 4473
Query 4486 CTTTTGATTTTGCTTAGACAAGACTTGGATTTTCAAGGTCAACTCGGTGGTTTACAAGCT 4545
|| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 4474 CTCTTAATTTTGCTTAGACAAGACTTGGATTTTCAAGGCCAACTCGGTGGTTTACAAGCT 4533
Query 4546 ATAGCAAACATCTTGGAGAAGCCAATGGTTCTTGAATCATTGAAAATTGCATCTTCCACA 4605
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |
Sbjct 4534 ATAGCAAACATCTTGGAGAAGCCAATGGTTCTTGAATCATTAAAAATTGCATCATCCGTA 4593
Query 4606 ATCATTATGCCTTTGATACCACTGCTTGAGTCCGAGTCAATAGCGGTCAAAAATGCAACC 4665
|| |||||||||||||||||||||||||| || || || ||||||||| |||||||||||
Sbjct 4594 ATTATTATGCCTTTGATACCACTGCTTGAATCTGAATCTATAGCGGTCCAAAATGCAACC 4653
Query 4666 ACA-ATACTACTGACCTCTCTACTCGAAATGCAACGTTTCCAAGAAGAGATAACAACCAA 4724
||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4654 ACAGA-ACTACTGACCTCTCTACTCGAAATGCAACGTTTCCAAGAAGAGATAACGACCAA 4712
Query 4725 AAATCTCATTGCTCCTCTAGTGAAACTGGTAGGGATCAGAGTAAGAAACTTACAAGAGAT 4784
||||||||| ||||||| |||||||| || |||||||| ||||||||||||||||||||
Sbjct 4713 AAATCTCATCCCTCCTCTTGTGAAACTTGTCGGGATCAGGGTAAGAAACTTACAAGAGAT 4772
Query 4785 AGCATTGATGGGTTTAGAGAGATCTTCAGTTACATGGCCAAAAGAGGTAGCAGATACCGG 4844
|||| ||||||||||||||| ||| |||||||||||| |||| |||||||||||| ||||
Sbjct 4773 AGCACTGATGGGTTTAGAGAAATCCTCAGTTACATGGACAAAGGAGGTAGCAGATGCCGG 4832
Query 4845 AGGAATTCAAGAGCTCTCCAAGGTTATCATCGACGAAGATCCTCAGCTTCCTGTATATCT 4904
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4833 AGGAATTCAAGAGCTGTCCAAGGTTATTATCGACGAAGATCCTCAGCTTCCTGTATATCT 4892
Query 4905 ATGGGAATCAGCAGCTTTCATTCTCTGCAACATTCTCAGAATCAACCCAGAACACTATTA 4964
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 4893 ATGGGAATCAGCAGCTTTCATTCTCTGCAACATTCTCAGATTCAACCCAGAACACTATTA 4952
Query 4965 CTTTACGGTGACTATACCAGTTCTGTCAAAAATGTTGTTCTCCACAGCTGAAAGCACAGT 5024
|||| | ||||||||||||||| | ||||||||||||||||| |||||||| ||||||||
Sbjct 4953 CTTTTCAGTGACTATACCAGTTTTATCAAAAATGTTGTTCTCAACAGCTGAGAGCACAGT 5012
Query 5025 GATCTTAGCCATCGACGCATTGATCATCCGTG-AGAATCAAGACTCGTCAAGCGTTCAAG 5083
|||||||||||||||| ||||||||||| ||| | |||||||| || ||||| |||||||
Sbjct 5013 GATCTTAGCCATCGACACATTGATCATCTGTGCA-AATCAAGAATCCTCAAGTGTTCAAG 5071
Query 5084 AAATGGCAGAATCCAGTGCACTCGACGCATTACTAGATCTACTAAGATCACACCACTGCG 5143
| ||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 5072 AGATGGCAGAAGCCGGTGCACTCGACGCATTACTAGATCTACTAAGATCCCACCATTGCG 5131
Query 5144 AAGAACTCTCAGCAAGATTACTCGAATTAATACTACGCAATCCAAAGGTTAGAGAGACAA 5203
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 5132 AAGAACTCTCCGCAAGATTACTCGAATTAATACTACGCAATCCAAAAGTTAGAGAGACAA 5191
Query 5204 AGATATGTCAGTTTGTACTTACCCCTCTATCAGAGTACATACTAGACCCAGACACAATAT 5263
||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||| |||
Sbjct 5192 AGATATGCCAGTTTGTACTAACCCCTTTATCTGAGTACATACTAGACCCAGACACAGTAT 5251
Query 5264 CAGAATCCGCAAAAATTCTCATAGCAATGGCTCTAGGTGACATCTCTCAACACGAAGGAC 5323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5252 CAGAATCCGCAAAAATTCTCATAGCAATGGCTCTAGGTGACATCTCTCAACACGAAGGAC 5311
Query 5324 TCGCTAAAGCCACGGACTCGCCCGTGGCATGTCGTGCGTTAATCAGCTTGCTTGAAGATG 5383
||||||||||||| |||||||||||||||||||||||||||||||||||||| || || |
Sbjct 5312 TCGCTAAAGCCACAGACTCGCCCGTGGCATGTCGTGCGTTAATCAGCTTGCTCGAGGAGG 5371
Query 5384 AACCGAGCGAGGAAATGCAAATGGTTGTGATGCGTGCTTTGGAAAACTTTGCAATGCATA 5443
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 5372 AACCGAGCGAGGAAATGCAAATGGTTGTGATGCGTGCTTTGGGAAACTTCGCAATGCATA 5431
Query 5444 GTAGAACAAGTCGTAAAGCTATGGCTGAAGCTGGTGGAGTATATTGGGTTCAGGAAATGC 5503
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 5432 GTAGAACAAGTCGTAAAGCTATGGCTGAAGCTGGTGGAGTATATTGGGTTCAAGAAATGC 5491
Query 5504 TTAGATCTAGTAATCCACAAGTTTCTACACAAGCAGCTCTAATTATCAAATCTCTCTTCT 5563
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5492 TTAGATCTTGTAATCCACAAGTTTCTACACAAGCAGCTCTAATTATCAAATCTCTCTTCT 5551
Query 5564 CTAATCATACACTTCAAGAATACGTCTCTGGTGAAATCATCAAATCTCTAACAAATGCGA 5623
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 5552 CTAATCATACACTTCAAGAATACGTCTCCGGCGAAATCATCAAATCTCTAACAAATGCGA 5611
Query 5624 TGGAGAGAGAGTTTTGGACAACGACGGCGATAAACGTAGAAATAGTGAGAACGCTAAACA 5683
||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||
Sbjct 5612 TGGAGAGAGAGTTTTGGACAACGGCGGCGATGAACGTGGAAATAGTAAGAACGCTAAACG 5671
Query 5684 CGATTCTCACAACGTTTCCAAAACTCCGTTCGTCGGAAGCAGCTACCGCTTGTATCCCTC 5743
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 5672 CGATTCTCACAACGTTTCCCAAACTCCGTTCGTCGGAAGCGGCTACCGCTTGTATCCCTC 5731
Query 5744 ACTTAATCGGAGCTTTGAAATCCGGCGAGCAAGAAGCGAGAGATTCGGCGATGGACACGA 5803
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 5732 ACTTAATCGGAGCTCTGAAATCCGGCGAGCAAGAAGCGAGAGATTCGGCGATGGATACGA 5791
Query 5804 TCTACACGTTGCGACAATCGTGGACAACAATGCCGACGGAGACGGCTAGATCTCAAGCTG 5863
| |||||||| ||||| ||||||| ||| |||| ||||||||| || ||||||||||| |
Sbjct 5792 TATACACGTTACGACAGTCGTGGATAACTATGCTGACGGAGACAGCGAGATCTCAAGCAG 5851
Query 5864 TTTTAGCGGCGGATGCGATTCCGGTTCTGCAATTGATGATGAAATCAAAATTGAAATCTC 5923
||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||||||
Sbjct 5852 TTTTAGCGGCGGAGGCGATTCCGGTTTTGCAATTGATGATGAAATCGAAATCGAAATCTC 5911
Query 5924 CAGCTCCATCGAGCTTCCATGAGAGAGGTAACAGTCTCTTGAATTGTTTGCCGGGAAGTC 5983
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5912 CAGCTCCGTCGAGCTTCCATGAGAGAGGTAACAGTCTCTTGAATTGTTTGCCGGGAAGTC 5971
Query 5984 TCACGGTGGCGATTAAACGCGGTGATAATCTGAAACGTTCAAATGCGTTTTGCAGATTAA 6043
||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct 5972 TCACGGTGGCGATTAAACGCGGTGATAATCTGAAACGGTCTAACGCGTTTTGCAGATTAA 6031
Query 6044 TCATCGACAATTGTCCCACCAAGAAAACCAAGGTTGTGAAACGAAGCAGCTCACCGGTTT 6103
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 6032 TCATCGATAATTGTCCCACAAAGAAAACCAAGGTTGTGAAACGAAGCAGCTCACCGGTTT 6091
Query 6104 GGAAAGAATCATTTACATGGGACTTTGCT-GCTCCACCTAGAGGACAGTTTCTTGAAATA 6162
||||||||||||||||||||||||||||| | ||| || ||||||||||||||||||||
Sbjct 6092 GGAAAGAATCATTTACATGGGACTTTGCTAG-TCCTCCAAGAGGACAGTTTCTTGAAATC 6150
Query 6163 GTCTGCAAATCTAACAACATCTTTCGAAACAAAAATCTTGGTAAAGTGAGGATACCAATT 6222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6151 GTCTGCAAATCTAACAACATCTTTCGAAACAAAAATCTTGGTAAAGTGAGGATACCAATT 6210
Query 6223 GATAAAGTATTGTCAGAAGGAAGTTACAGTGGAATATTCAAGCTAAATGATGAAAGCAAG 6282
|| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 6211 GACAAAGTATTGACAGAAGGAAGTTACAGTGGAATTTTCAAGCTAAATGATGAAAGCAAG 6270
Query 6283 AAAGATAATTCTTCTGATAGAAGTCTAGAGATTGAGATTGTTTGGTCTAATCAGTCATTT 6342
|||||| | || ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 6271 AAAGATGACTCGTCTGATAGAAGTCTAGAAATTGAGATTGTTTGGTCTAATCAGTCATTT 6330
Query 6343 TAA 6345
|||
Sbjct 6331 TAA 6333
> Ahg338989 jgi|Araly1|338989|fgenesh1_pg.C_scaffold_2001088
Length=1452
Score = 990 bits (536), Expect = 0.0
Identities = 605/639 (95%), Gaps = 2/639 (0%)
Strand=Plus/Plus
Query 5017 AGCACAGTGATCTTAGCCATCGACGCATTGATCATCCGTG-AGAATCAAGACTCGTCAAG 5075
|||||||||||||||||||||||| |||||||||||| || | ||||||||||| |||||
Sbjct 511 AGCACAGTGATCTTAGCCATCGACACATTGATCATCCATGCA-AATCAAGACTCCTCAAG 569
Query 5076 CGTTCAAGAAATGGCAGAATCCAGTGCACTCGACGCATTACTAGATCTACTAAGATCACA 5135
|||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 570 TGTTCAAGAGATGGCAGAAGCCGGTGCACTCGACGCATTACTAGATCTACTAAGATCACA 629
Query 5136 CCACTGCGAAGAACTCTCAGCAAGATTACTCGAATTAATACTACGCAATCCAAAGGTTAG 5195
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 630 CCACTGCGAAGAACTCTCCGCAAGATTACTCGAATTAATACTACGCAATCCAAAAGTTAG 689
Query 5196 AGAGACAAAGATATGTCAGTTTGTACTTACCCCTCTATCAGAGTACATACTAGACCCAGA 5255
||||||||||||||| ||||||||||| |||||| |||| ||||||||||||| || |||
Sbjct 690 AGAGACAAAGATATGCCAGTTTGTACTAACCCCTTTATCTGAGTACATACTAGGCCTAGA 749
Query 5256 CACAATATCAGAATCCGCAAAAATTCTCATAGCAATGGCTCTAGGTGACATCTCTCAACA 5315
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 750 CACAGTATCAGAATCCGCAAAAATTCTCATAGCAATGGCTCTAGGTGACATCTCTCAACA 809
Query 5316 CGAAGGACTCGCTAAAGCCACGGACTCGCCCGTGGCATGTCGTGCGTTAATCAGCTTGCT 5375
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 810 CGAAGGACTCGCTAAAGCCACAGACTCGCCCGTGGCATGTCGTGCGTTAATCAGCTTGCT 869
Query 5376 TGAAGATGAACCGAGCGAGGAAATGCAAATGGTTGTGATGCGTGCTTTGGAAAACTTTGC 5435
|| || |||||||||||||||||||||||||||||||| |||||||||| |||||| ||
Sbjct 870 CGAGGAGGAACCGAGCGAGGAAATGCAAATGGTTGTGATACGTGCTTTGGGAAACTTCGC 929
Query 5436 AATGCATAGTAGAACAAGTCGTAAAGCTATGGCTGAAGCTGGTGGAGTATATTGGGTTCA 5495
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 930 AATGCATAGTAGAACAAGTCGTAAAGCTATGGCTGAAGCTGGTGGAGTATATTTAGTTCA 989
Query 5496 GGAAATGCTTAGATCTAGTAATCCACAAGTTTCTACACAAGCAGCTCTAATTATCAAATC 5555
|||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 990 AGAAATGCTAAAATCTTGTAATCCACAAGTTTCTACACAAGCAGCTCTAATTATCAAATC 1049
Query 5556 TCTCTTCTCTAATCATACACTTCAAGAATACGTCTCTGGTGAAATCATCAAATCTCTAAC 5615
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1050 TCTCTTCTCTAATCATACACTTCAAGAATACGTCTCCGGCGAAATCATCAAATCTCTAAC 1109
Query 5616 AAATGCGATGGAGAGAGAGTTTTGGACAACGACGGCGAT 5654
||||||||||||||||||||||||||||||| |||||||
Sbjct 1110 AAATGCGATGGAGAGAGAGTTTTGGACAACGGCGGCGAT 1148
Score = 725 bits (392), Expect = 0.0
Identities = 466/502 (93%), Gaps = 3/502 (1%)
Strand=Plus/Plus
Query 4366 CAACTCTCCAAATCGCCGCCAAGTTCTTTGTGTTCTGTAATCGCAGATCTTTTCAGAGTT 4425
||||| ||| ||| || |||||||||||||||| |||||||||||| |||||||||||
Sbjct 11 CAACTGTCCCGATCTCCTCCAAGTTCTTTGTGTT-GGTAATCGCAGATTTTTTCAGAGTT 69
Query 4426 TTGACGAACGTTGGTGTTATAGCTCGAAGCCAAGACGCTATAAAAATGGTACAACCGCTC 4485
|||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||
Sbjct 70 TTGACGAACGTTGGTGTTGTAGCTAGAAGCCAAGAGGCTATAAAAATGGTACAACCGCTT 129
Query 4486 CTTTTGATTTTGCTTAGACAAGACTTGGATTTTCAAGGTCAACTCGGTGGTTTACAAGCT 4545
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
Sbjct 130 CTCTTGATTTTGCTTAGGCAAGACTTGGATTTTCAAGGCCAACTCGGTGGTTTACAAGGT 189
Query 4546 ATAGCAAACATCTTGGAGAAGCCAATGGTTCTTGAATCATTGAAAATTGCATCTTCCACA 4605
||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| ||
Sbjct 190 ATAGCAAACATCTTGGAGAAGCCAATGGTTCTTGAATCATTAAAAATGGCATCATCCGCA 249
Query 4606 ATCATTATGCCTTTGATACCACTGCTTGAGTCCGAGTCAATAGCGGTCAAAAATGCAACC 4665
|| |||||||||||||||||||||||||| || || || ||||||||| |||||||||||
Sbjct 250 ATTATTATGCCTTTGATACCACTGCTTGAATCTGAATCTATAGCGGTCCAAAATGCAACC 309
Query 4666 ACA-ATACTACTGACCTCTCTACTCGAAATGCAACGTTTCCAAGAAGAGATAACAACCAA 4724
||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 310 ACAGA-ACTACTGACCTCTCTACTCGAAATGCAACGTTTCCAAGAAGAGATAACGACCAA 368
Query 4725 AAATCTCATTGCTCCTCTAGTGAAACTGGTAGGGATCAGAGTAAGAAACTTACAAGAGAT 4784
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 369 AAATCTCATTGCTCCTCTTGTGAAACTTGTAGGGATCAGAGTAAGAAACTTACAAGAGAT 428
Query 4785 AGCATTGATGGGTTTAGAGAGATCTTCAGTTACATGGCCAAAAGAGGTAGCAGATACCGG 4844
|||||||||||||||||||| ||| |||||||||||| |||| |||||||||||| ||||
Sbjct 429 AGCATTGATGGGTTTAGAGAAATCCTCAGTTACATGGACAAAGGAGGTAGCAGATGCCGG 488
Query 4845 AGGAATTCAAGAGCTCTCCAAG 4866
||||||||||||||||||||||
Sbjct 489 AGGAATTCAAGAGCTCTCCAAG 510
Score = 401 bits (217), Expect = 3e-110
Identities = 246/259 (95%), Gaps = 6/259 (2%)
Strand=Plus/Plus
Query 5878 GCGATTCCGGTTCTGCAATTGATGATGAAATC---A---AAATTGAAATCTCCAGCTCCA 5931
|||||||||||| ||||||||||||||||||| | |||| |||||||||||||||
Sbjct 1144 GCGATTCCGGTTTTGCAATTGATGATGAAATCGAAATCGAAATCGAAATCTCCAGCTCCG 1203
Query 5932 TCGAGCTTCCATGAGAGAGGTAACAGTCTCTTGAATTGTTTGCCGGGAAGTCTCACGGTG 5991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1204 TCGAGCTTCCATGAGAGAGGTAACAGTCTCTTGAATTGTTTGCCGGGAAGTCTCACGGTG 1263
Query 5992 GCGATTAAACGCGGTGATAATCTGAAACGTTCAAATGCGTTTTGCAGATTAATCATCGAC 6051
||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct 1264 GCGATTAAACGCGGTGATAATCTGAAACGGTCTAACGCGTTTTGCAGATTAATCATCGAT 1323
Query 6052 AATTGTCCCACCAAGAAAACCAAGGTTGTGAAACGAAGCAGCTCACCGGTTTGGAAAGAA 6111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 AATTGTCCCACCAAGAAAACCAAGGTTGTGAAACGAAGCAGCTCACCGGTTTGGAAAGAA 1383
Query 6112 TCATTTACATGGGACTTTG 6130
|||||||||||||||||||
Sbjct 1384 TCATTTACATGGGACTTTG 1402
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 240447746214
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5