BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G45063.1
Length=1329
Score E
Sequences producing significant alignments: (Bits) Value
Ahg952263 jgi|Araly1|952263|scaffold_49600002.1 822 0.0
Ahg943595 jgi|Araly1|943595|scaffold_604139.1 822 0.0
Ahg943592 jgi|Araly1|943592|scaffold_604136.1 822 0.0
Ahg952262 jgi|Araly1|952262|scaffold_49600001.1 800 0.0
Ahg942579 jgi|Araly1|942579|scaffold_603123.1 797 0.0
Ahg942580 jgi|Araly1|942580|scaffold_603124.1 785 0.0
Ahg894914 jgi|Araly1|894914|Al_scaffold_0006_2910 510 9e-144
Ahg351911 jgi|Araly1|351911|fgenesh1_pg.C_scaffold_6002504 435 5e-121
> Ahg952263 jgi|Araly1|952263|scaffold_49600002.1
Length=860
Score = 822 bits (445), Expect = 0.0
Identities = 645/741 (87%), Gaps = 16/741 (2%)
Strand=Plus/Plus
Query 275 TTCTCTTCGGTTGTTGTTCGGCCACCGTCTACAAAGTGGGAGACTCCGATGGATGGACTG 334
|||| || ||||||| |||||| || ||| ||||||||||||||||||||||||||||
Sbjct 77 TTCTGTTGGGTTGTTTTTCGGCAACAGTCCACAAAGTGGGAGACTCCGATGGATGGAC-C 135
Query 335 CC-AAGGACCACCTCTATTACCATTGGACCGAGGA-TAAAGAGATCCACGTGGGAGATTC 392
|| ||||| || | | | | |||||||| | | | ||| ||||||||||||||||
Sbjct 136 CCTAAGGAAGACGAC-A--A-C--TGGACCGA-CAGTGAGGAGTTCCACGTGGGAGATTC 188
Query 393 TTTGATCTTCGAATACGATCACAACCTCAATGACGTCACACAAGTCTCCGGTGGTTTGGA 452
||||||| ||||| |||| ||| |||| || ||||| ||||| ||||| | ||||||
Sbjct 189 CCTGATCTTTGAATATGATCGTAACTTCAACGATGTCACTCAAGTTTCCGGCGCTTTGGA 248
Query 453 ATACGAATTCTGCGACTCTTCTTTTCCTAAAGCCGTCTACAACACAGGACATGATGTCGT 512
||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||
Sbjct 249 GTACGAATTCTGCGACTCTTCTTTCCCTAAAGCCGTCTACAACACAGGCCACGATGTTGT 308
Query 513 AACCTTCACGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATC 572
||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 AACTTTGAAGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATC 368
Query 573 GGGACAGAGGCTTGG-CGTTTTTGTCGTCCATGACCCGTCGAGTCCGAGTCCTCTACCA- 630
|||||||||||| || |||| |||| |||||||||||||||||||| ||||| ||||
Sbjct 369 GGGACAGAGGCT-GGACGTTCTTGTTACCCATGACCCGTCGAGTCCGATTCCTCCACCAT 427
Query 631 CTACCGAGCAAGATTATTCCTTCTAGACATGTCTACAAGGTTGGTGACTCCAAAAGTTGG 690
| ||||||||||||| |||| ||| || || |||||||||| || ||||||||||| |||
Sbjct 428 C-ACCGAGCAAGATTCTTCCGTCTGGAAATATCTACAAGGTAGGCGACTCCAAAAGATGG 486
Query 691 GGCGTTTACGACAGTGATTTCTATTACAACTGGAGTAAAGAGAAACAGTTCAATGTCGGA 750
|||||||||||||||| ||||||||| | ||||||||||||||||| ||| |||| |||
Sbjct 487 AGCGTTTACGACAGTGAGTTCTATTACCAGTGGAGTAAAGAGAAACAATTCCATGTTGGA 546
Query 751 GACGGTCTCCTTTTCGAATACAACAATGAAGTCAACGGTGTCTACGAGATCAGCGGTGAC 810
||| |||||||||||||||||||||| |||||||| | ||||| |||||||||||| |||
Sbjct 547 GACAGTCTCCTTTTCGAATACAACAACGAAGTCAATGATGTCTTCGAGATCAGCGGCGAC 606
Query 811 CTTGAATTCTTAAACTGCGACCCGACTTCTCCAATAGCCGTGCATAAGACAGGCCACGAT 870
||||||||| || |||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct 607 CTTGAATTCCTATACTGCGACCCGATTTCTCCCGTAGCCGTGCACAAGACAGGCCACGAT 666
Query 871 ATCATCAAGCTCACCAAACCAGGAATCCATTATTTCATTAGCTCAGAACCGGGTCACTGT 930
|||| ||||||||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct 667 CTCATAAAGCTCACCGAACCAGGAATCCATTATTTCATTAGCTCAGAGCCAGGTCACTGT 726
Query 931 GGGGCTGGTCTTAAGCTCCAAGTCGTGGTCGGAACAACA-CTCAATGTTCCAAAGTTGTC 989
| |||||| |||||||||||||| ||||| ||| ||||| | ||||||||||||||||||
Sbjct 727 GAGGCTGGACTTAAGCTCCAAGTTGTGGTTGGACCAACAGC-CAATGTTCCAAAGTTGTC 785
Query 990 ACCTTTAGAGCGTCTCACAAG 1010
||||||||| |||||||||||
Sbjct 786 ACCTTTAGAACGTCTCACAAG 806
> Ahg943595 jgi|Araly1|943595|scaffold_604139.1
Length=860
Score = 822 bits (445), Expect = 0.0
Identities = 645/741 (87%), Gaps = 16/741 (2%)
Strand=Plus/Plus
Query 275 TTCTCTTCGGTTGTTGTTCGGCCACCGTCTACAAAGTGGGAGACTCCGATGGATGGACTG 334
|||| || ||||||| |||||| || ||| ||||||||||||||||||||||||||||
Sbjct 77 TTCTGTTGGGTTGTTTTTCGGCAACAGTCCACAAAGTGGGAGACTCCGATGGATGGAC-C 135
Query 335 CC-AAGGACCACCTCTATTACCATTGGACCGAGGA-TAAAGAGATCCACGTGGGAGATTC 392
|| ||||| || | | | | |||||||| | | | ||| ||||||||||||||||
Sbjct 136 CCTAAGGAAGACGAC-A--A-C--TGGACCGA-CAGTGAGGAGTTCCACGTGGGAGATTC 188
Query 393 TTTGATCTTCGAATACGATCACAACCTCAATGACGTCACACAAGTCTCCGGTGGTTTGGA 452
||||||| ||||| |||| ||| |||| || ||||| ||||| ||||| | ||||||
Sbjct 189 CCTGATCTTTGAATATGATCGTAACTTCAACGATGTCACTCAAGTTTCCGGCGCTTTGGA 248
Query 453 ATACGAATTCTGCGACTCTTCTTTTCCTAAAGCCGTCTACAACACAGGACATGATGTCGT 512
||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||
Sbjct 249 GTACGAATTCTGCGACTCTTCTTTCCCTAAAGCCGTCTACAACACAGGCCACGATGTTGT 308
Query 513 AACCTTCACGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATC 572
||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 AACTTTGAAGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATC 368
Query 573 GGGACAGAGGCTTGG-CGTTTTTGTCGTCCATGACCCGTCGAGTCCGAGTCCTCTACCA- 630
|||||||||||| || |||| |||| |||||||||||||||||||| ||||| ||||
Sbjct 369 GGGACAGAGGCT-GGACGTTCTTGTTACCCATGACCCGTCGAGTCCGATTCCTCCACCAT 427
Query 631 CTACCGAGCAAGATTATTCCTTCTAGACATGTCTACAAGGTTGGTGACTCCAAAAGTTGG 690
| ||||||||||||| |||| ||| || || |||||||||| || ||||||||||| |||
Sbjct 428 C-ACCGAGCAAGATTCTTCCGTCTGGAAATATCTACAAGGTAGGCGACTCCAAAAGATGG 486
Query 691 GGCGTTTACGACAGTGATTTCTATTACAACTGGAGTAAAGAGAAACAGTTCAATGTCGGA 750
|||||||||||||||| ||||||||| | ||||||||||||||||| ||| |||| |||
Sbjct 487 AGCGTTTACGACAGTGAGTTCTATTACCAGTGGAGTAAAGAGAAACAATTCCATGTTGGA 546
Query 751 GACGGTCTCCTTTTCGAATACAACAATGAAGTCAACGGTGTCTACGAGATCAGCGGTGAC 810
||| |||||||||||||||||||||| |||||||| | ||||| |||||||||||| |||
Sbjct 547 GACAGTCTCCTTTTCGAATACAACAACGAAGTCAATGATGTCTTCGAGATCAGCGGCGAC 606
Query 811 CTTGAATTCTTAAACTGCGACCCGACTTCTCCAATAGCCGTGCATAAGACAGGCCACGAT 870
||||||||| || |||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct 607 CTTGAATTCCTATACTGCGACCCGATTTCTCCCGTAGCCGTGCACAAGACAGGCCACGAT 666
Query 871 ATCATCAAGCTCACCAAACCAGGAATCCATTATTTCATTAGCTCAGAACCGGGTCACTGT 930
|||| ||||||||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct 667 CTCATAAAGCTCACCGAACCAGGAATCCATTATTTCATTAGCTCAGAGCCAGGTCACTGT 726
Query 931 GGGGCTGGTCTTAAGCTCCAAGTCGTGGTCGGAACAACA-CTCAATGTTCCAAAGTTGTC 989
| |||||| |||||||||||||| ||||| ||| ||||| | ||||||||||||||||||
Sbjct 727 GAGGCTGGACTTAAGCTCCAAGTTGTGGTTGGACCAACAGC-CAATGTTCCAAAGTTGTC 785
Query 990 ACCTTTAGAGCGTCTCACAAG 1010
||||||||| |||||||||||
Sbjct 786 ACCTTTAGAACGTCTCACAAG 806
> Ahg943592 jgi|Araly1|943592|scaffold_604136.1
Length=859
Score = 822 bits (445), Expect = 0.0
Identities = 644/740 (87%), Gaps = 14/740 (2%)
Strand=Plus/Plus
Query 275 TTCTCTTCGGTTGTTGTTCGGCCACCGTCTACAAAGTGGGAGACTCCGATGGATGGACTG 334
|||| || |||||||||||||| || ||| |||||||||||||||||||||||||| |
Sbjct 76 TTCTGTTGGGTTGTTGTTCGGCAACGGTCCACAAAGTGGGAGACTCCGATGGATGGGC-C 134
Query 335 CC-AAGGACCACCTCTATTACCATTGGACCGA-GGATAAAGAGATCCACGTGGGAGATTC 392
|| ||||| | | || |||||||||| | | | ||| ||||||||||||||||
Sbjct 135 CCTAAGGA--A----GACGACAATTGGACCGACCG-TGAGGAGTTCCACGTGGGAGATTC 187
Query 393 TTTGATCTTCGAATACGATCACAACCTCAATGACGTCACACAAGTCTCCGGTGGTTTGGA 452
|| |||| ||||| |||| ||| |||| || ||||| ||||| ||||| ||||||||
Sbjct 188 CCTGGTCTTTGAATATGATCGTAACTTCAACGATGTCACTCAAGTTTCCGGCGGTTTGGA 247
Query 453 ATACGAATTCTGCGACTCTTCTTTTCCTAAAGCCGTCTACAACACAGGACATGATGTCGT 512
||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||| ||
Sbjct 248 GTACGAATTCTGTGACTCTTCTTTCCCTAAAGCCGTCTACAACACAGGCCACGATGTTGT 307
Query 513 AACCTTCACGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATC 572
||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 308 AACATTAAAGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATC 367
Query 573 GGGACAGAGGCTTGG-CGTTTTTGTCGTCCATGACCCGTCGAGTCCGAGTCCTCTACCA- 630
|||||||||||| || |||| |||| |||||||||||||||||||| ||||| ||||
Sbjct 368 GGGACAGAGGCT-GGACGTTCTTGTTACCCATGACCCGTCGAGTCCGATTCCTCCACCAT 426
Query 631 CTACCGAGCAAGATTATTCCTTCTAGACATGTCTACAAGGTTGGTGACTCCAAAAGTTGG 690
| ||||||||||||| |||| ||| || || |||||||||| || ||||||||||| |||
Sbjct 427 C-ACCGAGCAAGATTCTTCCGTCTGGAAATATCTACAAGGTAGGCGACTCCAAAAGATGG 485
Query 691 GGCGTTTACGACAGTGATTTCTATTACAACTGGAGTAAAGAGAAACAGTTCAATGTCGGA 750
|||||||||||||||| ||||||||| | ||||||||||||||||| ||| |||| |||
Sbjct 486 AGCGTTTACGACAGTGAGTTCTATTACCAGTGGAGTAAAGAGAAACAATTCCATGTTGGA 545
Query 751 GACGGTCTCCTTTTCGAATACAACAATGAAGTCAACGGTGTCTACGAGATCAGCGGTGAC 810
||| |||||||||||||||||||||| |||||||| | ||||| |||||||||||| |||
Sbjct 546 GACAGTCTCCTTTTCGAATACAACAACGAAGTCAATGATGTCTTCGAGATCAGCGGCGAC 605
Query 811 CTTGAATTCTTAAACTGCGACCCGACTTCTCCAATAGCCGTGCATAAGACAGGCCACGAT 870
||||||||| || |||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct 606 CTTGAATTCCTATACTGCGACCCGATTTCTCCCGTAGCCGTGCACAAGACAGGCCACGAT 665
Query 871 ATCATCAAGCTCACCAAACCAGGAATCCATTATTTCATTAGCTCAGAACCGGGTCACTGT 930
|||| ||||||||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct 666 CTCATAAAGCTCACCGAACCAGGAATCCATTATTTCATTAGCTCAGAGCCAGGTCACTGT 725
Query 931 GGGGCTGGTCTTAAGCTCCAAGTCGTGGTCGGAACAACACTCAATGTTCCAAAGTTGTCA 990
| |||||| |||||||||||||| ||||| ||| |||||| |||||||||||||||||||
Sbjct 726 GAGGCTGGACTTAAGCTCCAAGTTGTGGTTGGACCAACACCCAATGTTCCAAAGTTGTCA 785
Query 991 CCTTTAGAGCGTCTCACAAG 1010
|||||||| |||||||||||
Sbjct 786 CCTTTAGAACGTCTCACAAG 805
> Ahg952262 jgi|Araly1|952262|scaffold_49600001.1
Length=860
Score = 800 bits (433), Expect = 0.0
Identities = 641/741 (87%), Gaps = 16/741 (2%)
Strand=Plus/Plus
Query 275 TTCTCTTCGGTTGTTGTTCGGCCACCGTCTACAAAGTGGGAGACTCCGATGGATGGACTG 334
|||| || |||||||||||||| || ||| |||||||||||||||||||||||||| |
Sbjct 77 TTCTGTTGGGTTGTTGTTCGGCAACGGTCCACAAAGTGGGAGACTCCGATGGATGGGC-C 135
Query 335 CC-AAGGACCACCTCTATTACCATTGGACCGA-GGATAAAGAGATCCACGTGGGAGATTC 392
|| ||||| | | || |||||||||| | | | ||| ||||||||||||||||
Sbjct 136 CCTAAGGA--A----GACGACAATTGGACCGACCG-TGAGGAGTTCCACGTGGGAGATTC 188
Query 393 TTTGATCTTCGAATACGATCACAACCTCAATGACGTCACACAAGTCTCCGGTGGTTTGGA 452
|| |||| ||||| |||| ||| |||| || ||||| ||||| ||||| ||||||||
Sbjct 189 CCTGGTCTTTGAATATGATCGTAACTTCAACGATGTCACTCAAGTTTCCGGCGGTTTGGA 248
Query 453 ATACGAATTCTGCGACTCTTCTTTTCCTAAAGCCGTCTACAACACAGGACATGATGTCGT 512
||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||| ||
Sbjct 249 GTACGAATTCTGTGACTCTTCTTTCCCTAAAGCCGTCTACAACACAGGCCACGATGTTGT 308
Query 513 AACCTTCACGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATC 572
||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 AACTTTAAAGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATC 368
Query 573 GGGACAGAGGCTTGG-CGTTTTTGTCGTCCATGACCCGTCGAGTCCGAGTCCTCTACCA- 630
|||||||| ||| || |||| |||| |||||||||||||||||||| ||||| ||||
Sbjct 369 GGGACAGAAGCT-GGACGTTCTTGTTACCCATGACCCGTCGAGTCCGATTCCTCCACCAT 427
Query 631 CTACCGAGCAAGATTATTCCTTCTAGACATGTCTACAAGGTTGGTGACTCCAAAAGTTGG 690
| ||||||||||||| |||| ||| || || |||||||||| || ||||||||||| |||
Sbjct 428 C-ACCGAGCAAGATTCTTCCGTCTGGAAATATCTACAAGGTAGGCGACTCCAAAAGATGG 486
Query 691 GGCGTTTACGACAGTGATTTCTATTACAACTGGAGTAAAGAGAAACAGTTCAATGTCGGA 750
|||||||||| ||||| ||||||||| | ||||||||||| ||||| ||| |||| |||
Sbjct 487 AGCGTTTACGATAGTGAGTTCTATTACCAGTGGAGTAAAGAAAAACAATTCCATGTTGGA 546
Query 751 GACGGTCTCCTTTTCGAATACAACAATGAAGTCAACGGTGTCTACGAGATCAGCGGTGAC 810
||| |||||||||||||||||||||| |||||||| | ||||| |||||||||||| |||
Sbjct 547 GACAGTCTCCTTTTCGAATACAACAACGAAGTCAATGATGTCTTCGAGATCAGCGGCGAC 606
Query 811 CTTGAATTCTTAAACTGCGACCCGACTTCTCCAATAGCCGTGCATAAGACAGGCCACGAT 870
||||||||| || |||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct 607 CTTGAATTCCTATACTGCGACCCGATTTCTCCCGTAGCCGTGCACAAGACAGGCCACGAT 666
Query 871 ATCATCAAGCTCACCAAACCAGGAATCCATTATTTCATTAGCTCAGAACCGGGTCACTGT 930
|||| ||||||||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct 667 CTCATAAAGCTCACCGAACCAGGAATCCATTATTTCATTAGCTCAGAGCCAGGTCACTGT 726
Query 931 GGGGCTGGTCTTAAGCTCCAAGTCGTGGTCGGAACAACA-CTCAATGTTCCAAAGTTGTC 989
| |||||| |||||||||||||| ||||| ||| ||||| | ||||||||||||||||||
Sbjct 727 GAGGCTGGACTTAAGCTCCAAGTTGTGGTTGGACCAACAGC-CAATGTTCCAAAGTTGTC 785
Query 990 ACCTTTAGAGCGTCTCACAAG 1010
||||||||| |||||||||||
Sbjct 786 ACCTTTAGAACGTCTCACAAG 806
> Ahg942579 jgi|Araly1|942579|scaffold_603123.1
Length=860
Score = 797 bits (431), Expect = 0.0
Identities = 635/733 (87%), Gaps = 16/733 (2%)
Strand=Plus/Plus
Query 283 GGTTGTTGTTCGGCCACCGTCTACAAAGTGGGAGACTCCGATGGATGGACTGCCAAGGAC 342
|||||||||||||| || ||| ||| |||||||| ||||||||||||||| || |||||
Sbjct 85 GGTTGTTGTTCGGCAACGGTCCACATAGTGGGAGGCTCCGATGGATGGACCGCTAAGGA- 143
Query 343 CACCTCTATTACCATTGGACCGA-GGATAAAGAGAT-CCACGTGGGAGATTCTTTGATCT 400
| | | ||| |||||||| | | ||| | ||||||||||||||| ||||||
Sbjct 144 -A-GACGA-CACC--TGGACCGACCG-TCCCGAG-TACCACGTGGGAGATTCCCTGATCT 196
Query 401 TCGAATACGATCACAACCTCAATGACGTCACACAAGTCTCCGGTGGTTTGGAATACGAAT 460
| ||||| |||| ||| | | || || || ||||| ||||| |||||||| |||||||
Sbjct 197 TTGAATATGATCGTAACTTGAGCGATGTTACTCAAGTTTCCGGCGGTTTGGAGTACGAAT 256
Query 461 TCTGCGACTCTTCTTTTCCTAAAGCCGTCTACAACACAGGACATGATGTCGTAACCTTCA 520
|||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| || |
Sbjct 257 TCTGCGACTCTTCTTTCCCTAAAGCCGTCTACAACACAGGCCACGATGTTGTAACTTTGA 316
Query 521 CGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATCGGGACAGA 580
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 317 AGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATCGGGACAGA 376
Query 581 GGCTTGG-CGTTTTTGTCGTCCATGACCCGTCGAGTCCGAGTCCTCTACCA-CTACCGAG 638
||| || |||| |||| |||||||||||||||||||| ||||| |||| | ||||||
Sbjct 377 AGCT-GGACGTTCTTGTTACCCATGACCCGTCGAGTCCGATTCCTCCACCATC-ACCGAG 434
Query 639 CAAGATTATTCCTTCTAGACATGTCTACAAGGTTGGTGACTCCAAAAGTTGGGGCGTTTA 698
||||||| |||| ||| || || |||||||||| || ||||||||||| ||| |||||||
Sbjct 435 CAAGATTCTTCCGTCTGGAAATATCTACAAGGTAGGCGACTCCAAAAGATGGAGCGTTTA 494
Query 699 CGACAGTGATTTCTATTACAACTGGAGTAAAGAGAAACAGTTCAATGTCGGAGACGGTCT 758
||||||||| ||||||||| | ||||||||||||||||||||| |||| |||||| ||||
Sbjct 495 CGACAGTGAGTTCTATTACCAGTGGAGTAAAGAGAAACAGTTCCATGTTGGAGACAGTCT 554
Query 759 CCTTTTCGAATACAACAATGAAGTCAACGGTGTCTACGAGATCAGCGGTGACCTTGAATT 818
|||||||||||||||||| ||||||| | ||||| |||||||||||| |||||||||||
Sbjct 555 CCTTTTCGAATACAACAACAAAGTCAATGATGTCTTCGAGATCAGCGGCGACCTTGAATT 614
Query 819 CTTAAACTGCGACCCGACTTCTCCAATAGCCGTGCATAAGACAGGCCACGATATCATCAA 878
| || |||||||||||| |||||| |||||||||| ||||||||||||||| || ||||
Sbjct 615 CCTATACTGCGACCCGATTTCTCCCGTAGCCGTGCACAAGACAGGCCACGATCTCGTCAA 674
Query 879 GCTCACCAAACCAGGAATCCATTATTTCATTAGCTCAGAACCGGGTCACTGTGGGGCTGG 938
||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 675 GCTCACCGAACCAGGAATCCATTATTTCATTAGCTCAGAACCAGGTCACTGTGAGGCTGG 734
Query 939 TCTTAAGCTCCAAGTCGTGGTCGGAACAACA-CTCAATGTTCCAAAGTTGTCACCTTTAG 997
|||||||||||||| ||||| ||| ||||| | ||||||||||||||||||||||||||
Sbjct 735 ACTTAAGCTCCAAGTTGTGGTTGGACCAACAGC-CAATGTTCCAAAGTTGTCACCTTTAG 793
Query 998 AGCGTCTCACAAG 1010
| |||||||||||
Sbjct 794 AACGTCTCACAAG 806
> Ahg942580 jgi|Araly1|942580|scaffold_603124.1
Length=860
Score = 785 bits (425), Expect = 0.0
Identities = 633/733 (86%), Gaps = 16/733 (2%)
Strand=Plus/Plus
Query 283 GGTTGTTGTTCGGCCACCGTCTACAAAGTGGGAGACTCCGATGGATGGACTGCCAAGGAC 342
|||||||||||||| || ||| ||| |||||||| ||||||||||||||| || |||||
Sbjct 85 GGTTGTTGTTCGGCAACGGTCCACATAGTGGGAGGCTCCGATGGATGGACCGCTAAGGA- 143
Query 343 CACCTCTATTACCATTGGACCGA-GGATAAAGAGAT-CCACGTGGGAGATTCTTTGATCT 400
| | | ||| |||||||| | | ||| | ||||||||||||||| ||||||
Sbjct 144 -A-GACGA-CACC--TGGACCGACCG-TCCCGAG-TACCACGTGGGAGATTCCCTGATCT 196
Query 401 TCGAATACGATCACAACCTCAATGACGTCACACAAGTCTCCGGTGGTTTGGAATACGAAT 460
| ||||| |||| ||| | | || || || ||||| ||||| |||||||| |||||||
Sbjct 197 TTGAATATGATCGTAACTTGAGCGATGTTACTCAAGTTTCCGGCGGTTTGGAGTACGAAT 256
Query 461 TCTGCGACTCTTCTTTTCCTAAAGCCGTCTACAACACAGGACATGATGTCGTAACCTTCA 520
|||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| || |
Sbjct 257 TCTGCGACTCTTCTTTCCCTAAAGCCGTCTACAACACAGGCCACGATGTTGTAACTTTGA 316
Query 521 CGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATCGGGACAGA 580
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 317 AGGAACCAGGGTCTTACTACTTCATCACCTCAAACCATACTCAATGTACATCGGGACAGA 376
Query 581 GGCTTGG-CGTTTTTGTCGTCCATGACCCGTCGAGTCCGAGTCCTCTACCA-CTACCGAG 638
||| || |||| |||| |||||||||||||||||||| ||||| | | | ||||||
Sbjct 377 AGCT-GGACGTTCTTGTTACCCATGACCCGTCGAGTCCGATTCCTCCAAAATC-ACCGAG 434
Query 639 CAAGATTATTCCTTCTAGACATGTCTACAAGGTTGGTGACTCCAAAAGTTGGGGCGTTTA 698
||||||| |||| ||| || || |||||||||| || ||||||||||| ||| |||||||
Sbjct 435 CAAGATTCTTCCGTCTGGAAATATCTACAAGGTAGGCGACTCCAAAAGATGGAGCGTTTA 494
Query 699 CGACAGTGATTTCTATTACAACTGGAGTAAAGAGAAACAGTTCAATGTCGGAGACGGTCT 758
||||||||| ||||||||| | ||||||||||||||||||||| |||| |||||| ||||
Sbjct 495 CGACAGTGAGTTCTATTACCAGTGGAGTAAAGAGAAACAGTTCCATGTTGGAGACAGTCT 554
Query 759 CCTTTTCGAATACAACAATGAAGTCAACGGTGTCTACGAGATCAGCGGTGACCTTGAATT 818
|||||||||||||||||| ||||||| | ||||| |||||||||||| |||||||||||
Sbjct 555 CCTTTTCGAATACAACAACAAAGTCAATGATGTCTTCGAGATCAGCGGCGACCTTGAATT 614
Query 819 CTTAAACTGCGACCCGACTTCTCCAATAGCCGTGCATAAGACAGGCCACGATATCATCAA 878
| || |||||||||||| |||||| |||||||||| ||||||||||||||| || ||||
Sbjct 615 CCTATACTGCGACCCGATTTCTCCCGTAGCCGTGCACAAGACAGGCCACGATCTCGTCAA 674
Query 879 GCTCACCAAACCAGGAATCCATTATTTCATTAGCTCAGAACCGGGTCACTGTGGGGCTGG 938
||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 675 GCTCACCGAACCAGGAATCCATTATTTCATTAGCTCAGAACCAGGTCACTGTGAGGCTGG 734
Query 939 TCTTAAGCTCCAAGTCGTGGTCGGAACAACA-CTCAATGTTCCAAAGTTGTCACCTTTAG 997
|||||||||||||| ||||| ||| ||||| | ||||||||||||||||||||||||||
Sbjct 735 ACTTAAGCTCCAAGTTGTGGTTGGACCAACAGC-CAATGTTCCAAAGTTGTCACCTTTAG 793
Query 998 AGCGTCTCACAAG 1010
| |||||||||||
Sbjct 794 AACGTCTCACAAG 806
> Ahg894914 jgi|Araly1|894914|Al_scaffold_0006_2910
Length=462
Score = 510 bits (276), Expect = 9e-144
Identities = 379/429 (88%), Gaps = 5/429 (1%)
Strand=Plus/Plus
Query 585 TGG-CGTTTTTGTCGTCCATGACCCGTCGAGTCCGAGTCCTCTACCACT-ACCGAGCAAG 642
||| |||| |||| |||||||||||||||||||| ||||| | | | ||||||||||
Sbjct 2 TGGACGTTCTTGTTACCCATGACCCGTCGAGTCCGATTCCTCCA-AAATCACCGAGCAAG 60
Query 643 ATTATTCCTTCTAGACATGTCTACAAGGTTGGTGACTCCAAAAGTTGGGGCGTTTACGAC 702
||| |||| ||| || || |||||||||| || ||||||||||| ||| |||||||||||
Sbjct 61 ATTCTTCCGTCTGGAAATATCTACAAGGTAGGCGACTCCAAAAGATGGAGCGTTTACGAC 120
Query 703 AGTGATTTCTATTACAACTGGAGTAAAGAGAAACAGTTCAATGTCGGAGACGGTCTCCTT 762
||||| ||||||||| | ||||||||||||||||||||| |||| |||||| ||||||||
Sbjct 121 AGTGAGTTCTATTACCAGTGGAGTAAAGAGAAACAGTTCCATGTTGGAGACAGTCTCCTT 180
Query 763 TTCGAATACAACAATGAAGTCAACGGTGTCTACGAGATCAGCGGTGACCTTGAATTCTTA 822
|||||||||||||| ||||||| | ||||| |||||||||||| |||||||||||| ||
Sbjct 181 TTCGAATACAACAACAAAGTCAATGATGTCTTCGAGATCAGCGGCGACCTTGAATTCCTA 240
Query 823 AACTGCGACCCGACTTCTCCAATAGCCGTGCATAAGACAGGCCACGATATCATCAAGCTC 882
|||||||||||| |||||| |||||||||| ||||||||||||||| || ||||||||
Sbjct 241 TACTGCGACCCGATTTCTCCCGTAGCCGTGCACAAGACAGGCCACGATCTCGTCAAGCTC 300
Query 883 ACCAAACCAGGAATCCATTATTTCATTAGCTCAGAACCGGGTCACTGTGGGGCTGGTCTT 942
||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct 301 ACCGAACCAGGAATCCATTATTTCATTAGCTCAGAACCAGGTCACTGTGAGGCTGGACTT 360
Query 943 AAGCTCCAAGTCGTGGTCGGAACAACA-CTCAATGTTCCAAAGTTGTCACCTTTAGAGCG 1001
||||||||||| ||||| ||| ||||| | ||||||||||||||||||||||||||| ||
Sbjct 361 AAGCTCCAAGTTGTGGTTGGACCAACAGC-CAATGTTCCAAAGTTGTCACCTTTAGAACG 419
Query 1002 TCTCACAAG 1010
|||||||||
Sbjct 420 TCTCACAAG 428
> Ahg351911 jgi|Araly1|351911|fgenesh1_pg.C_scaffold_6002504
Length=474
Score = 435 bits (235), Expect = 5e-121
Identities = 308/344 (90%), Gaps = 2/344 (1%)
Strand=Plus/Plus
Query 668 AGGTTGGTGACTCCAAAAGTTGGGGCGTTTACGACAGTGATTTCTATTACAACTGGAGTA 727
|||| || ||||||||||| ||| |||||||||||||||| ||||||||| | |||||||
Sbjct 98 AGGTAGGCGACTCCAAAAGATGGAGCGTTTACGACAGTGAGTTCTATTACCAGTGGAGTA 157
Query 728 AAGAGAAACAGTTCAATGTCGGAGACGGTCTCCTTTTCGAATACAACAATGAAGTCAACG 787
|||||||||||||| |||| |||||| |||||||||| ||| ||||||| ||||||| |
Sbjct 158 AAGAGAAACAGTTCCATGTTGGAGACAGTCTCCTTTTTGAAAACAACAACAAAGTCAATG 217
Query 788 GTGTCTACGAGATCAGCGGTGACCTTGAATTCTTAAACTGCGACCCGACTTCTCCAATAG 847
||||| |||||||||||| |||||||||||| || |||||||||||| |||||| |||
Sbjct 218 ATGTCTTCGAGATCAGCGGCGACCTTGAATTCCTATACTGCGACCCGATTTCTCCCGTAG 277
Query 848 CCGTGCATAAGACAGGCCACGATATCATCAAGCTCACCAAACCAGGAATCCATTATTTCA 907
||||||| ||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct 278 CCGTGCACAAGACAGGCCACGATCTCGTCAAGCTCACCGAACCAGGAATCCATTATTTCA 337
Query 908 TTAGCTCAGAACCGGGTCACTGTGGGGCTGGTCTTAAGCTCCAAGTCGTGGTCGGAACAA 967
||||||||||||| |||||||||| |||||| |||||||||||||| ||||| ||| |||
Sbjct 338 TTAGCTCAGAACCAGGTCACTGTGAGGCTGGACTTAAGCTCCAAGTTGTGGTTGGACCAA 397
Query 968 CA-CTCAATGTTCCAAAGTTGTCACCTTTAGAGCGTCTCACAAG 1010
|| | ||||||||||||||||||||||||||| |||||||||||
Sbjct 398 CAGC-CAATGTTCCAAAGTTGTCACCTTTAGAACGTCTCACAAG 440
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49712283768
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5