BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G48195.1 Length=450 Score E Sequences producing significant alignments: (Bits) Value Ahg923145 jgi|Araly1|923145|scaffold_104426.1 438 1e-122 > Ahg923145 jgi|Araly1|923145|scaffold_104426.1 Length=289 Score = 438 bits (237), Expect = 1e-122 Identities = 267/282 (95%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 2 GAGAAGAGAAAATATGTCTGAAGAAAAATTCCCAGAACGTCCAGGCGAACCAGAGTGCAG 61 |||||||||||||||||| || | ||| |||||||||||||||||||||||||||||||| Sbjct 8 GAGAAGAGAAAATATGTCCGACGGAAATTTCCCAGAACGTCCAGGCGAACCAGAGTGCAG 67 Query 62 CTATTATCTTAGAACTGGAAACTGTTATCTGAAACAAAACTGCAAATACCATCACCCGAA 121 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 68 CTATTATCTTAGAACTGGAAACTGTTATCTGAAACAAAATTGCAAATACCATCACCCCAA 127 Query 122 GAATATAACGCCGAGCGAGCCTCAATGTACTCTCAATGACAAGGGCTTACCATTAAGACC 181 ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 128 GAATATAACGCCGAGAGAGCCTCCATGTCCTCTCAATGACAAGGGCTTACCATTAAGACC 187 Query 182 TGGTCAAGCCATTTGCCCGCATTACAGTCGCTTCGGCATTTGCAGATCCGGTCCGACTTG 241 || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 188 TGATCAAGCCATTTGCCCACATTACAGTCGCTTCGGCATTTGCAAATCCGGTCCGACTTG 247 Query 242 TAAATTCGACCATTTTACCTAACCATCATCCTCAACTTGCAA 283 |||||||||||||| ||||||||||||||||||| || |||| Sbjct 248 TAAATTCGACCATTCTACCTAACCATCATCCTCAGCTCGCAA 289 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16254280914 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5