BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G51500.1
Length=2342
Score E
Sequences producing significant alignments: (Bits) Value
Ahg923635 jgi|Araly1|923635|scaffold_104916.1 3578 0.0
Ahg479628 jgi|Araly1|479628|fgenesh2_kg.3__2329__AT3G21090.1 1773 0.0
> Ahg923635 jgi|Araly1|923635|scaffold_104916.1
Length=2138
Score = 3578 bits (1937), Expect = 0.0
Identities = 2071/2137 (97%), Gaps = 3/2137 (0%)
Strand=Plus/Plus
Query 58 tctctctctAATAAGTAAGGTTTTGATCTTTTTCAAGATCAAAC-AAAAACAATGGAGTT 116
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 3 TCTCTCTCTAATAAGTAAGGTTTTGATCTTTTTCAAGATCAAACAAAAAAAAATGGAGTT 62
Query 117 AGAGAGTACGAGCAATGGCCGACGTCCGCCGCCACCGGCAGAGATTGGCCGTGGGGCGTA 176
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 63 AGAGAGTACGAGCAATGGCCGACGTCCACCGCCGCCGGCAGAGATTGGCCGTGGGGCGTA 122
Query 177 CTTGGCGTGGGAAGATTTGACGGTGGTTATACCAAACTTTAGTGGTGGTCCGACTCGAAG 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 CTTGGCGTGGGAAGATTTGACGGTGGTTATACCAAACTTTAGTGGTGGTCCGACTCGAAG 182
Query 237 ATTGCTCGATGGA-TTAAACGGTCATGCTGAACCAGGTCGGATTATGGCCATTATGGGTC 295
||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 183 ATTGCTCGATGGACTT-AACGGTCATGCTGAACCGGGTCGGATTATGGCCATTATGGGTC 241
Query 296 CTTCCGGATCCGGCAAGTCCACGCTTCTTGATTCTCTCGCAGGTAGACTCGCAAGAAACG 355
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 242 CTTCCGGATCCGGCAAGTCTACGCTTCTTGATTCTCTCGCAGGTAGACTCGCAAGAAACG 301
Query 356 TGATTATGACCGGTAATCTTCTATTGAACGGAAAGAAGGCAAGACTAGACTACGGTCTCG 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 302 TGATTATGACCGGTAATCTTCTATTGAACGGAAAGAAGGCAAGACTAGACTACGGCCTCG 361
Query 416 TCGCTTATGTAACACAAGAGGACATTTTGATGGGAACACTAACGGTGAGGGAGACAATAA 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 TCGCTTATGTAACACAAGAGGACATTTTGATGGGAACACTAACGGTGAGGGAGACAATAA 421
Query 476 CATACTCAGCTCATCTACGGCTATCAAGTGATTTGACCAAAGAAGAAGTCAACGACATTG 535
||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||
Sbjct 422 CATACTCAGCTCATCTAAGGCTGTCTAGTGATTTGACCAAAGAAGAAGTCAACGACATTG 481
Query 536 TTGAAGGAACAATCATTGAACTTGGTCTTCAAGATTGTGCAGACAGAGTCATAGGTAATT 595
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 482 TTGAAGGAACAATCATTGAGCTTGGTCTTCAAGATTGTGCAGACAGAGTCATAGGTAATT 541
Query 596 GGCATTCTAGAGGAGTGAGTGGCGGCGAGAGGAAACGCGTCAGCGTTGCGTTAGAGATCT 655
|||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct 542 GGCACTCTAGAGGAGTGAGTGGCGGTGAGAGGAAACGCGTTAGCGTTGCGTTGGAGATCT 601
Query 656 TAACGCGACCGCAAATTTTGTTTCTTGATGAACCTACTAGTGGTTTGGACAGTGCTTCTG 715
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 602 TAACGCGGCCGCAAATTTTGTTTCTTGATGAACCCACTAGTGGTTTGGACAGTGCTTCTG 661
Query 716 CTTTCTTTGTGATTCAAGCGCTAAGGAATATCGCTCGAGATGGTGGTAGAACCGTTGTTT 775
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 662 CTTTCTTTGTGATTCAAGCGCTTAGAAATATCGCTCGAGATGGTGGTAGAACCGTTGTTT 721
Query 776 CATCGATTCATCAACCTAGTAGCGAAGTTTTTGCTCTCTTTGATGATCtttttttGCTCT 835
|||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 722 CATCGATTCACCAGCCTAGTAGCGAAGTTTTCGCTCTCTTTGATGATCTATTTTTGCTCT 781
Query 836 CTAGTGGTGAGACTGTTTATTTTGGTGAATCCAAGTTTGCTGTTGAGTTCTTTGCTGAAG 895
||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct 782 CTAGTGGAGAGACTGTTTATTTTGGCGAGTCCAAGTTTGCTGTTGAGTTCTTTGCCGAAG 841
Query 896 CGGGGTTTCCTTGCCCGAAGAAACGGAATCCTTCTGATCATTTCCTAAGATGTATCAACT 955
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 842 CGGGTTTTCCTTGCCCGAAGAAACGGAATCCTTCTGATCATTTCCTAAGATGTATAAACT 901
Query 956 CAGACTTTGATACCGTTACAGCTACACTCAAAGGATCTCAAAGGATTCGGGAGACACCAG 1015
| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 902 CGGACTTTGATACCGTTACAGCTACACTCAAAGGATCACAGAGGATTCGGGAGACACCAG 961
Query 1016 CTACATCAGATCCTTTGATGAATCTAGCAACATCTGAGATCAAAGCTAGGCTTGTTGAGA 1075
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 962 CTACATCAGATCCTTTAATGAATCTAGCAACATCTGAGATCAAAGCTAGACTTGTTGAGA 1021
Query 1076 ATTATCGTCGTTCAGTCTACGCTAAATCTGCAAAATCTCGCATCCGTGAATTAGCTAGCA 1135
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1022 ATTATCGTCGTTCAATCTACGCGAAATCTGCAAAATCTCGCATCCGTGAATTAGCTAGCA 1081
Query 1136 TTGAAGGACATCATGGGATGGAAGTGAGAAAGGGAAGCGAAGCGACGTGGTTTAAGCAGC 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1082 TTGAAGGACATCATGGGATGGAAGTGAGAAAGGGAAGCGAAGCGACGTGGTTTAAACAGC 1141
Query 1196 TAAGAACTTTGACAAAGAGATCATTTGTGAACATGTGCCGCGATATTGGATACTATTGGT 1255
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1142 TAAGAACTTTGACAAAGAGATCATTTGTGAACATGACCCGCGATATTGGATACTATTGGT 1201
Query 1256 CAAGAATTGTGATCTATATTGTGGTATCATTCTGTGTTGGGACAATCTTTTACGATGTAG 1315
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 1202 CAAGAATTGTGATCTATATTGTGGTATCATTCTGCGTCGGGACAATCTTTTACGATGTAG 1261
Query 1316 GACATAGCTACACATCGATCTTGGCTCGGGTTTCTTGTGGTGGATTCATTACCGGTTTCA 1375
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1262 GGCATAGCTACACATCGATCTTGGCTCGGGTTTCTTGTGGTGGATTCATTACCGGTTTCA 1321
Query 1376 TGACTTTCATGTCCATTGGAGGGTTTCCTTCTTTCATTGAAGAAATGAAAGTGTTCTATA 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322 TGACTTTCATGTCCATTGGAGGGTTTCCTTCTTTCATTGAAGAAATGAAAGTGTTCTATA 1381
Query 1436 AAGAGAGATTGAGTGGTTACTACGGCGTTTCGGTTTATATCATATCGAATTACGTCTCTT 1495
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1382 AAGAGAGATTGAGTGGTTACTACGGTGTTTCGGTTTATATCATATCGAATTACGTCTCTT 1441
Query 1496 CTTTCCCGTTCTTGGTAGCCATTGCGCTCATCACAGGGAGTATTACTTACAACATGGTGA 1555
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1442 CTTTCCCGTTCTTGGTAGCGATTGCGCTCATCACAGGGAGTATTACTTACAACATGGTGA 1501
Query 1556 AATTCCGTCCTGGTGTCTCGCATTGGGCTTTCTTCTGTCTCAACATATTCTTCTCTGTCT 1615
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1502 AATTCCGTCCTGGGGTCTCGTATTGGGCTTTCTTCTGTCTCAACATATTCTTCTCTGTCT 1561
Query 1616 CCGTCATTGAGAGTCTCATGATGGTTGTGGCTTCTCTTGTTCCGAATTTCTTGATGGGTC 1675
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1562 CAGTCATTGAGAGTCTCATGATGGTTGTGGCTTCTCTTGTTCCAAATTTCTTGATGGGTC 1621
Query 1676 TTATCACAGGAGCTGGCATCATTGGAATCATCATGATGACTTCTGGATTCTTCCGTTTGC 1735
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1622 TAATCACAGGAGCAGGCATCATTGGAATCATCATGATGACTTCTGGATTCTTCCGTTTGC 1681
Query 1736 TTCCCGATCTGCCAAAGGTTTTCTGGCGCTACCCGATTTCCTTCATGAGTTATGGTTCTT 1795
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1682 TTCCCGATCTTCCAAAGGTTTTCTGGCGCTACCCGATTTCCTTCATGAGTTATGGTTCTT 1741
Query 1796 GGGCTATTCAGGGAGCATACAAGAATGATTTTCTTGGTCTAGAGTTTGACCCGATGTTTG 1855
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1742 GGGCTATTCAGGGAGCATACAAGAACGATTTTCTTGGTCTAGAGTTCGACCCGATGTTTG 1801
Query 1856 CGGGGGAACCAAAGATGACAGGAGAGCAAGTGATAAACAAGATATTTGGAGTGCAAGTCA 1915
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1802 CGGGGGAACCCAAGATGACAGGAGAGCAAGTGATAAACAAGATATTCGGAGTGCAAGTCA 1861
Query 1916 CACATTCTAAGTGGTGGGACTTATCAGCGATCGTGTTGATCCTTGTGTGTTACCGCATTC 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1862 CACATTCTAAGTGGTGGGACTTATCAGCGATCGTGTTGATCCTTGTGTGTTACCGCATTC 1921
Query 1976 TATTTTTCATAGTCTTGAAGCTTAAGGAGAGAGCAGAGCCGGCTTTGAAGGCGATACAAG 2035
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 TCTTCTTCATAGTCTTGAAGCTTAAGGAGAGAGCAGAGCCGGCTTTGAAGGCGATACAAG 1981
Query 2036 CAAAGCGAACGATGAAGAGTCTCAAAAAGAGACCTTCTTTCAAGAAAGTTCCATCTCTAT 2095
||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 1982 CAAAGAGAACGATGAAGACTCTCAAAAAGAGACCGTCTTTCAAGAAAGTTCCATCTCTAT 2041
Query 2096 CATCACTATCTTCAAGGAGACACCAACCTCTACATTCACTTTCTTCTCAAGAAGGTCTTA 2155
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2042 CTTCACTATCTTCAAGGAGACACCAACCTCTACACTCACTTTCTTCTCAAGAAGGTCTTA 2101
Query 2156 CCTCTCCAATTAATTAAAGATTATATCTATTTGTGTA 2192
|||||||||||||||||||| ||||||||| ||||||
Sbjct 2102 CCTCTCCAATTAATTAAAGACTATATCTATATGTGTA 2138
> Ahg479628 jgi|Araly1|479628|fgenesh2_kg.3__2329__AT3G21090.1
Length=2203
Score = 1773 bits (960), Expect = 0.0
Identities = 1697/2047 (83%), Gaps = 74/2047 (4%)
Strand=Plus/Plus
Query 156 AGAGATTG-GCCGTGGGGCGTACTTGGCGTGGGAAGATTTGACGGTGGTTATACCAAACT 214
||||| || ||||||| ||||| |||||||||||||| ||||||||||| ||||| || |
Sbjct 138 AGAGA-TGAGCCGTGGAGCGTATTTGGCGTGGGAAGACTTGACGGTGGTAATACCCAA-T 195
Query 215 TT-AGTGGTGGTCCGACTC-GAAGATTGC-TCGATGGATTAAACGGTCATGCTGAACCAG 271
|| |||| |||||| || | |||| |||| || | || |||||||| |||| ||||| |
Sbjct 196 TTCAGTGATGGTCCAAC-CAGAAGGTTGCTTCAAAGG-CTAAACGGTTATGCAGAACCGG 253
Query 272 GTCGGATTATGGCCATTATGGGTCCTTCCGGATCCGGCAAGTCCACGCTTCTTGATTCTC 331
||||||| ||||| || |||||||||||||||||||| |||||||| |||||||| ||||
Sbjct 254 GTCGGATCATGGCTATAATGGGTCCTTCCGGATCCGGAAAGTCCACTCTTCTTGACTCTC 313
Query 332 TCGCAGGTAGACTCGCAAGAAACGTGATTATGACCGGTAATCTTCTATTGAACGGAAAGA 391
| |||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||
Sbjct 314 TTGCAGGTAGACTCGCAAGAAACGTGGTCATGACCGGTAATCTTCTATTAAACGGCAAGA 373
Query 392 AGGCAAGACTAGACTACGGTCTCGTCGCTTATGTAACACAAGAGGACATTTTGATGGGAA 451
| || |||||||||||||||||||| || ||||| ||||||||||| || ||| |||| |
Sbjct 374 AAGCTAGACTAGACTACGGTCTCGTAGCATATGTGACACAAGAGGATATATTGCTGGGGA 433
Query 452 CACTAACGGTGAGGGAGACAATAACATACTCAGCTCATCT-ACGGCTAT-CAAGTGATTT 509
|| |||| |||||||||||||||||||||||||||||| | | | || | |||||||| |
Sbjct 434 CATTAACAGTGAGGGAGACAATAACATACTCAGCTCATTTGA-GACT-TCCAAGTGATAT 491
Query 510 GACCAAAGAAGAAGTCAACGACATTGTTGAAGGAACAATCATTGAACTTGGTCTTCAAGA 569
| | ||||| ||||| | |||||||| ||||| |||||||| || ||||||||||||||
Sbjct 492 GTCTAAAGAGGAAGTGAGTGACATTGTGGAAGGCACAATCATGGAGCTTGGTCTTCAAGA 551
Query 570 TTGTGCAGACAGAGTCATAGGTAATTGGCATTCTAGAGGAGTGAGTGGCGGCGAGAGGAA 629
||| ||||||||||||| || || ||||| | |||||||| |||||||| ||||||||
Sbjct 552 CTGTTCAGACAGAGTCATTGGAAACTGGCACGCAAGAGGAGTTAGTGGCGGTGAGAGGAA 611
Query 630 ACGCGTCAGCGTTGCGTTAGAGATCTTAACGCGACCGCAAAT-TTTGTTTCTTGATGAAC 688
||| |||||| |||| || |||||| | || || || ||||| || ||||| || ||||
Sbjct 612 ACGTGTCAGCATTGCTTTGGAGATCCTCACTCGTCCTCAAATCCTT-TTTCTCGACGAAC 670
Query 689 CTACTAGTGGTTTGGACAGTGCTTCTGC-TTTCTTTGTGATTCAAGCGCTAAGGAATATC 747
| || || |||||||||||||||||||| ||| || || ||||| ||||| ||||| ||
Sbjct 671 CCACAAGCGGTTTGGACAGTGCTTCTGCGTTT-TTCGTCATTCAGGCGCTTAGGAACATT 729
Query 748 GCTCGAGATGGTGGTAGAACCGTTGTTTCATCGATTCATCAACCTAGTAGCGAAGTTTTT 807
|| || || ||| |||||||| |||| ||| ||||||| ||||| ||||| ||||||
Sbjct 730 GCACGCGA---TGGCAGAACCGTAATTTCCTCGGTTCATCAGCCTAGCAGCGAGGTTTTT 786
Query 808 GCTCTCTTTGATGATCtttttttGCTCTCTAGTGGTGAGACTGTTTATTTTGGTGAATCC 867
|| || |||||||||||||| |||||||| ||||||||| |||| || ||||||||| ||
Sbjct 787 GCGCTATTTGATGATCTTTTCTTGCTCTCGAGTGGTGAGTCTGTCTACTTTGGTGAAGCC 846
Query 868 AAGTTTGCTGTTGAGTTCTTTGCTGAAGCGGGGTTTCCTTGCCCGAAGAAACGGAATCCT 927
|||| |||||||||||||||||| ||| | || ||||| |||||||||||| ||||||||
Sbjct 847 AAGTCTGCTGTTGAGTTCTTTGCAGAATCAGGTTTTCCATGCCCGAAGAAAAGGAATCCT 906
Query 928 TCTGATCATTTCCTAAGATGTATCAACTCAGACTTTGATACCGTTACAGCTACACTCAAA 987
||||||||||| || |||||||| ||||||||||||||||| || |||||||||||||||
Sbjct 907 TCTGATCATTTTCTTAGATGTATAAACTCAGACTTTGATACAGTCACAGCTACACTCAAA 966
Query 988 GGATCTCAAAGGATTCGGGAGACACCAGCTACATCAGATCCTTTGATGAATCTAGCAACA 1047
|||||||| || |||| ||| |||||||||||||| |||||| |||||||||||||||||
Sbjct 967 GGATCTCAGAGAATTCAGGAAACACCAGCTACATCGGATCCTCTGATGAATCTAGCAACA 1026
Query 1048 TCTGAGATCAAAGCTAGGCTTGTTGAGAATTATC--GTCGTTCAGTCTACGCTAAATCTG 1105
|||| ||||||||| ||||||||||||||||| | | |||||| || || ||||| |
Sbjct 1027 TCTGTGATCAAAGCAAGGCTTGTTGAGAATTA-CAAG-CGTTCAAAGTATGCGAAATCCG 1084
Query 1106 CAAAATCTCGCATCCGTGAATTAGCTAGCATTGAAGGACATCATGGGATGGAAGTGAGAA 1165
|||||||| | || || ||| || ||| ||||||||| | || | ||||||| | ||||
Sbjct 1085 CAAAATCTAGGATTCGAGAACTATCTAACATTGAAGGGC-TC--GAGATGGAAATAAGAA 1141
Query 1166 AGGGAAGCGAAGCGACG-TGGTTTAAGCAGCTAAGAACTTTGACA-AAGAGATCATTTGT 1223
| ||||| ||||||| | |||| || || || || || || ||| | |||||||| |
Sbjct 1142 AAGGAAGTGAAGCGA-GCTGGTGGAAACAACTTAGGACATTAACAGCA-AGATCATTCAT 1199
Query 1224 GAACATGTGCCGCGATATTGGATACTATTGGTCAAGAATTGTGATCTATATTGTGGTATC 1283
|||||||| || ||| | || ||||||||| || |||| | | ||| ||||| || ||
Sbjct 1200 AAACATGTGTCGTGATGTCGGTTACTATTGGACACGAATAATAAGCTACATTGTTGTTTC 1259
Query 1284 AT-TCTGTGTTGGGACAATCTTTTACGATGTAGGAC-ATAGCTACACATCGATCTTGGCT 1341
| | |||| || || ||||| ||||| || || | ||||||||||||| ||||| ||
Sbjct 1260 -TATAAGTGTAGGAACCATCTTCTACGACGTTGG-CTATAGCTACACATCAATCTTAGCC 1317
Query 1342 CGGGTTTCTTGTGGTGGATTCATTACCGGTTTCATGACTTTCATGTCCATTGGAGGGTTT 1401
|| ||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 1318 CGAGTTTCTTGTGGCGGATTCATCACTGGTTTCATGACTTTCATGTCCATTGGAGGCTTC 1377
Query 1402 CCTTCTTTCATTGAAGAAATGAAAGTGTTCTATAAAGAGAGATTGAGTGGTTACTACGGC 1461
||||||||| | ||||||||||| ||||||||||||||||| ||||||| ||||| |||
Sbjct 1378 CCTTCTTTCCTCGAAGAAATGAAGGTGTTCTATAAAGAGAGGCTGAGTGGATACTATGGC 1437
Query 1462 GTTTCGGTTTATATCATATCGAATTACGTCTCTTCTTTCCCGTTCTTGGTAGCCAT-TGC 1520
|| || ||||||||| | ||||||||| |||||||||||||||||||||| || || | |
Sbjct 1438 GTGTCAGTTTATATCCTCTCGAATTACATCTCTTCTTTCCCGTTCTTGGTTGCGATAT-C 1496
Query 1521 GCTCATCACAGGG-AGTATTACTTACAACATGGTGAAATTCCGT-CCTGGTGTCTCGCAT 1578
| | ||||| ||| | ||||||||||||| ||||||| || ||| || ||| ||||||||
Sbjct 1497 GGTTATCAC-GGGAACTATTACTTACAACTTGGTGAAGTTTCGTCCCGGGT-TCTCGCAT 1554
Query 1579 TGGGCTTTCTTCTGTCTCAACATATTCTTCTCTGTCTCCGTCATTGAGAGTCTCATGATG 1638
| |||||||||||||||||||| |||||||| || || || || |||||||||||||||
Sbjct 1555 TACGCTTTCTTCTGTCTCAACATCTTCTTCTCAGTTTCTGTGATAGAGAGTCTCATGATG 1614
Query 1639 GTTGTGGCTTCTCTTGTTCCGAATTTCTTGATGGGTCTTATCACAGGAGCTGGCATCATT 1698
|||||||||| |||| |||| ||||||||||||||||||||||| ||||||||| |||||
Sbjct 1615 GTTGTGGCTTTTCTTTTTCCAAATTTCTTGATGGGTCTTATCACTGGAGCTGGCCTCATT 1674
Query 1699 GGAATCATCATGATGACTTCTGGATTCTTCCGT-TTGCTTCCCGATCTGCC-AAAGGT-T 1755
||||||||||||||||||||||||||||||||| || ||||| ||||| || ||| | |
Sbjct 1675 GGAATCATCATGATGACTTCTGGATTCTTCCGTCTT-CTTCCTGATCTTCCCAAAA-TCT 1732
Query 1756 TTCTGGCGCTACCCGATTTCCTT-CATGAGTTATGGTTCTTGGGCTATTCAGGGAGCATA 1814
|| ||||| |||||| |||| || ||| || || |||||||||||||| ||||||| ||
Sbjct 1733 TT-TGGCGTTACCCGGTTTC-TTACATAAGCTACGGTTCTTGGGCTATCCAGGGAGGGTA 1790
Query 1815 CAAGAATGATTTTCTTGGTCTAGAGTTTGACCCGATGTTTGCGGGGGAACC-AAAGATGA 1873
|||||| |||||||| || |||||||| || || ||||| |||| || || ||| ||||
Sbjct 1791 CAAGAACGATTTTCTAGGGCTAGAGTTCGAGCCTATGTTCCCGGGTGAGCCGAAA-ATGA 1849
Query 1874 CAGGAGA-GCAAGTGATAAACAAGATATTTGGAGTGCAAG-TCACACATTCTAAGTGGTG 1931
||||||| | |||||||| | ||| |||||||||| ||| | ||| |||| || |||||
Sbjct 1850 CAGGAGAAG-AAGTGATAGAGAAGGTATTTGGAGTA-AAGGTGACATATTCAAAATGGTG 1907
Query 1932 GGACTTATCAGCGATCGT-GTTGATCCTTGTGTGTTACCG-CATTCTATTTTTCATAGTC 1989
||| ||| | ||| |||| | ||||||||||||||| | | |||| || ||| | |||
Sbjct 1908 GGATTTAGCTGCGGTCGTAGCA-ATCCTTGTGTGTTACAGGC-TTCTCTTCTTCGTGGTC 1965
Query 1990 TTGAAGCTTAAGG-AGAGAGCAG-AGCCGGCTTTGAAGGCGATACAAGCAAAGCGAACGA 2047
| ||| || ||| ||||||||| | ||||||||||||||||| || ||||| ||||||
Sbjct 1966 CTAAAG-TTGAGGGAGAGAGCAGGA-CCGGCTTTGAAGGCGATTCAGGCAAAAAGAACGA 2023
Query 2048 TGAAGAGTCTCAAAAAGAGACCTTCTTTCAAGA-AA-G--TTC-CA-TCTCTATCA-TCA 2100
||| || |||| | | ||||||||||||||||| || | ||| | ||||| ||| |
Sbjct 2024 TGAGGAATCTCGATAGGAGACCTTCTTTCAAGAGAATGCCTTCTCTGTCTCTTTCACTGT 2083
Query 2101 C-T-A-T--CTTCAAGGAGACACCAACCTCTACATTCACTTTCTTCTCAAGAAGGTCTTA 2155
| | | | |||||||||||||||||||||| | ||||||||||| |||||||| ||||
Sbjct 2084 CGTCAATGTCTTCAAGGAGACACCAACCTCTCCGCTCACTTTCTTCACAAGAAGGCCTTA 2143
Query 2156 CCTCTCC 2162
||||||
Sbjct 2144 ACTCTCC 2150
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88217007420
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5