BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G51570.1
Length=2519
Score E
Sequences producing significant alignments: (Bits) Value
Ahg474270 jgi|Araly1|474270|fgenesh2_kg.1__4224__AT1G51570.1 4048 0.0
Ahg486240 jgi|Araly1|486240|fgenesh2_kg.5__2232__AT3G57880.1 2529 0.0
Ahg488114 jgi|Araly1|488114|fgenesh2_kg.6__1248__AT5G12970.1 920 0.0
> Ahg474270 jgi|Araly1|474270|fgenesh2_kg.1__4224__AT1G51570.1
Length=2457
Score = 4048 bits (2192), Expect = 0.0
Identities = 2368/2452 (97%), Gaps = 15/2452 (1%)
Strand=Plus/Plus
Query 1 ATGCAGAGACCACCTCCTGAAGATTTCTCCTTAAAGGAGACAAAACCTCATCTCGGTGGA 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1 ATGCAGAGACCACCTCCTGAAGATTTCTCCTTAAAGGAGACTAAACCTCATCTCGGTGGA 60
Query 61 GGCAAAGTCACCGGAGATAAGCTCACAACCACATATGACCTCGTCGAGCAAATGCAGTAT 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 61 GGCAAAGTCACCGGAGATAAGCTCACGACCACATATGACCTCGTCGAGCAAATGCAGTAT 120
Query 121 CTCTATGTTCGTGTCGTAAAGGCTAAAGAATTACCAGGTAAAGACTTAACTGGTAGTTGT 180
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 121 CTCTATGTTCGTGTCGTAAAGGCTAAAGATTTACCAGGTAAAGACTTAACTGGTAGCTGT 180
Query 181 GACCCTTACGTTGAAGTTAAGCTTGGTAACTACAGAGGAACCACTAGACATTTCGAGAAG 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 181 GACCCTTACGTCGAAGTTAAGCTTGGTAACTACAGAGGAACCACTAGACATTTTGAGAAG 240
Query 241 AAATCTAATCCTGAGTGGAACCAAGTTTTCGCCTTTTCTAAAGATAGGGTACAAGCTTCT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AAATCTAATCCTGAGTGGAACCAAGTTTTCGCCTTTTCTAAAGATAGGGTACAAGCTTCT 300
Query 301 TATCTTGAAGCTACTGTCAAGGATAAAGATTTAGTTAAAGATGATTTGATTGGTCGTGTT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TATCTTGAAGCTACTGTCAAGGATAAAGATTTAGTTAAAGATGATTTGATTGGTCGTGTT 360
Query 361 GTGTTTGATTTGAATGAGATACCTAAGAGAGTTCCTCCTGATAGTCCTTTAGCTCCACAA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GTGTTTGATTTGAATGAGATACCTAAGAGAGTTCCTCCTGATAGTCCTTTAGCTCCACAA 420
Query 421 TGGTATAGATTAGAAGATGGGAAAGGCCAAAAAGTTAAAGGAGAGCTTATGTTAGCTGTT 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 421 TGGTATAGATTAGAAGATGGGAAAGGCCAGAAAGTTAAAGGAGAGCTTATGTTAGCTGTT 480
Query 481 TGGTTTGGTACTCAAGCTGATGAAGCTTTTCCTGAAGCTTGGCACTCTGATGCTGCAACT 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 481 TGGTTTGGTACTCAAGCTGATGAAGCTTTCCCTGAAGCTTGGCACTCTGATGCTGCAACT 540
Query 541 GTTAGTGGAACTGATGCTTTAGCTAACATCAGATCTAAGGTTTATCTCTCTCCTAAGCTT 600
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 541 GTTAGTGGAACTGATGCTTTAGCTAACATCAGGTCTAAGGTTTATCTGTCTCCTAAGCTT 600
Query 601 TGGTATCTTAGGGTTAATGTCATTGAAGCTCAGGATTTGATACCGAGCGATAAAGGGAGA 660
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 601 TGGTATCTTAGGGTTAATGTGATTGAAGCTCAGGATTTGATACCGAGCGATAAAGGGAGA 660
Query 661 TATCCTGAAGTCTTTGTGAAAGTGATAATGGGAAATCAGGCATTGAGGACTAGAGTGTCA 720
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TATCCTGAAGTTTTTGTGAAAGTGATAATGGGAAATCAGGCATTGAGGACTAGAGTGTCA 720
Query 721 CAAAGCAGGAGTATTAATCCGATGTGGAATGAGGATTTGATGTTTGTTGTAGCTGAGCCG 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 CAAAGCAGGAGTATTAATCCGATGTGGAATGAGGATTTGATGTTTGTTGTAGCTGAGCCG 780
Query 781 TTTGAAGAGCCTTTGATTCTAAGTGTGGAAGATAGAGTTGCGCCGAATAAAGATGAAGTC 840
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 781 TTTGAAGAGCCTTTGATTCTAAGTGTGGAAGATAGAGTTGCACCGAATAAAGATGAAGTC 840
Query 841 TTGGGGAGATGCGCGGTTCCGTTGCAGTATTTGGACAAAAGGTTTGACTATAGACCGGTG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TTGGGGAGATGCGCGGTTCCGTTGCAGTATTTGGACAAAAGGTTTGACTATAGACCGGTG 900
Query 901 AACAGCAGGTGGTTTAACCTTGAGAAGCATGTTATAATGGAAGGAGGAGAGAAGAAAGAG 960
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 901 AACAGCAGGTGGTTTAACCTCGAGAAGCATGTTATAATGGAAGGAGGAGAGAAGAAAGAG 960
Query 961 ATCAAATTCGCCAGCAAGATCCACATGAGGATTTGTTTGGAAGGAGGGTATCATGTGCTT 1020
|||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct 961 ATCAAATTTGCCAGCAAGATTCACATGAGGATCTGTTTGGAAGGAGGTTATCATGTGCTT 1020
Query 1021 GATGAGTCTACACATTACAGTAGTGACCTAAGACCAACTGCAAAGCAACTGTGGAAGCCT 1080
||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1021 GATGAATCTACACATTACAGTAGTGACCTTAGACCAACTGCAAAGCAACTATGGAAGCCT 1080
Query 1081 AACATCGGTGTGCTTGAGCTAGGGGTCTTAAATGCGACCGGTTTAATGCCCATGAAAGCT 1140
||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1081 AACATCGGTGTTCTTGAGCTAGGGGTCTTAAATGCGACTGGTTTAATGCCTATGAAAGCT 1140
Query 1141 AAAGAAGGTGGTAGGGGAACCACGGACGCGTATTGTGTGGCAAAGTATGGGCAGAAATGG 1200
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1141 AAAGAAGGTGGTAGGGGAACCACGGATGCGTATTGTGTGGCAAAGTATGGGCAGAAATGG 1200
Query 1201 ATCAGAACTCGGACAATTATTGACAGCTTTACCCCAAGATGGAACGAGCAATATACTTGG 1260
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 ATCAGAACTCGGACAATCATTGACAGCTTTACCCCAAGATGGAACGAGCAATATACTTGG 1260
Query 1261 GAGGTTTTTGATCCGTGTACTGTAGTTACAGTTGGTGTGTTCGATAACTGCCATCTACAC 1320
|| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1261 GAAGTTTTCGATCCGTGTACTGTTGTTACTGTTGGTGTGTTCGATAACTGCCATCTACAC 1320
Query 1321 GGTGGTGACAAAAACAACGGAGGAGGAAAAGATTCAAGAATTGGAAAGGTGAGGATAAGG 1380
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1321 GGTGGTGACAAAAACAACGGAGGAGGAAAAGATTCAAGGATTGGGAAGGTGAGGATAAGG 1380
Query 1381 CTCTCTACTCTCGAGGCTGATCGAGTCTACACACATTCATATCCTCTTTTGGTGCTACAT 1440
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1381 CTCTCTACTCTCGAGGCTGATCGAGTCTACACACATTCATATCCTCTATTGGTGCTACAT 1440
Query 1441 CCTAGTGGAGTCAAGAAAATGGGAGAGATTCACTTAGCGGTGAGGTTTACTTGCTCTTCA 1500
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1441 CCTAATGGAGTCAAGAAAATGGGAGAGATTCACTTAGCTGTGAGGTTTACTTGCTCTTCA 1500
Query 1501 TTGCTCAACATGATGTATATGTATTCTATGCCTCTCTTACCTAAGATGCACTACCTCCAT 1560
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 1501 TTGCTCAACATGATGTATATGTATTCTTTGCCTCTCTTACCGAAGATGCACTACCTCCAT 1560
Query 1561 CCCCTCACGGTTAGCCAGCTCGATAACTTAAGGCATCAAGCAACTCAGATTGTGTCGACA 1620
|| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct 1561 CCTCTCACGGTTAGCCAGCTTGATAACTTGAGGCATCAAGCGACTCAGATTGTGTCGACA 1620
Query 1621 AGGCTAACACGAGCAGAGCCGCCTTTGAGGAAAGAAGTTGTTGAGTATATGCTTGATGTG 1680
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1621 AGGCTAACACGTGCAGAGCCACCTTTGAGGAAAGAAGTTGTTGAGTATATGCTTGATGTG 1680
Query 1681 GGATCTCACATGTGGAGTATGCGTAGAAGCAAGGCGAATTTCTTCAGGATAATGGGAGTC 1740
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681 GGATCTCACATGTGGAGTATGCGTAGAAGCAAGGCGAATTTCTTCAGGATAATGGGAGTT 1740
Query 1741 TTGAGTGGGATAATCGCTGTAGGGAAATGGTTTGAACAGATCTGCGTATGGAAAAATCCG 1800
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1741 TTGAGTGGGATAATCGCGGTAGGGAAATGGTTTGAACAGATCTGTGTATGGAAAAATCCG 1800
Query 1801 ATAACAACGGTTTTAATCCACATTCTCTTCATTATCCTTGTTATCTACCCCGAGCTCATC 1860
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct 1801 ATAACAACGGTTTTAATCCACATTCTGTTCATTATCCTTGTTATCTATCCCGAGCTTATC 1860
Query 1861 TTGCCCACCATTTTCCTCTACCTCTTCTTGATTGGAGTTTGGTACTATCGCTGGAGGCCG 1920
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1861 TTGCCCACCATTTTCCTCTACCTCTTCTTGATTGGAGTTTGGTACTATCGTTGGAGGCCG 1920
Query 1921 AGACATCCTCCACACATGGACACACGTCTCTCACACGCTGACTCAGCACACCCTGATGAG 1980
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1921 AGACATCCTCCTCACATGGACACACGTCTCTCACACGCAGACTCAGCACACCCTGATGAG 1980
Query 1981 CTCGACGAGGAGTTTGACACTTTCCCTACTTCCCGACCATCAGACATCGTCAGGATGAGA 2040
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1981 CTCGACGAGGAGTTTGACACTTTTCCTACTTCCCGACCATCAGACATCGTCAGGATGAGA 2040
Query 2041 TATGACCGACTCAGAAGCATTGCTGGTAGGATTCAAACAGTTGTTGGTGATCTTGCAACT 2100
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2041 TATGACAGACTCAGAAGCATTGCTGGTAGGATTCAAACAGTTGTTGGTGATCTTGCAACT 2100
Query 2101 CAAGGAGAGAGATTTCAGTCGTTGCTAAGCTGGCGTGACCCGCGTGCCACTGCTCTCTTC 2160
|||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 2101 CAAGGAGAGAGATTCCAGTCGTTGCTAAGCTGGCGTGACCCTCGTGCTACTGCTCTCTTC 2160
Query 2161 GTCTTGTTCTGTCTGATAGCTGCAGTGATTTTATATATAACTCCCTTCCAGGTTGTGGCT 2220
||||||||||||||||||||||| ||| || | ||| |||||||||| ||||||||||||
Sbjct 2161 GTCTTGTTCTGTCTGATAGCTGCGGTGGTTCTGTATGTAACTCCCTTTCAGGTTGTGGCT 2220
Query 2221 TTTGCC-ATTGGCTTGTATGTGCTTAGACACCCGAGGCTCAGGTACAAGCTCCCATCAGT 2279
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TTT-CTTATTGGCTTGTATGTGCTTAGACACCCGAGGCTCAGGTACAAGCTCCCATCAGT 2279
Query 2280 TCCACTTAACTTCTTCAGGAGGCTTCCAGCAAGAACTGATTGCATGCTCTGAGTTACTTA 2339
||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2280 TCCTCTTAACTTCTTCAGGAGACTTCCAGCAAGAACTGATTGCATGCTCTGAGTTACTTC 2339
Query 2340 AGATTTCTCCATTTCAAGAAAGACTCCTCTGTTCTAGTTTGTTATCGTTTTGAAGTCCTT 2399
||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||
Sbjct 2340 AGATTTCTCCATTTCAAGAAAGACTCCTCTGTTTTAGTTTGTTATCGTTTT-----C-TT 2393
Query 2400 ACCTCTTCTTTGTGATGTTGGATGATCATGtttttttCTGTTTGACATTATT 2451
| | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct 2394 -C-T-TT----GTGATGTTGGATGATCATGTTTTCTTCTGTTTGACATTATT 2438
> Ahg486240 jgi|Araly1|486240|fgenesh2_kg.5__2232__AT3G57880.1
Length=2821
Score = 2529 bits (1369), Expect = 0.0
Identities = 2032/2351 (86%), Gaps = 49/2351 (2%)
Strand=Plus/Plus
Query 1 ATGCAGAGACCACCTCCTGAAGATTTCTCCTTAAAGGAGACAAAACCTCATCTCGGTGGA 60
|||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||
Sbjct 328 ATGCAGAGACCACCTCCTGAAGATTTCTCCTTGAAGGAGACGAGACCTCATCTCGGTGGA 387
Query 61 GGCAAAGTCACCGGAGATAAGCTCACAACCACATATGACCTCGTCGAGCAAATGCAGTAT 120
|| ||| || | ||||||||||| || | ||| ||||||||||| ||||| |||||||||
Sbjct 388 GGAAAAATCTCTGGAGATAAGCTGACCAGCACTTATGACCTCGTGGAGCAGATGCAGTAT 447
Query 121 CTCTATGTTCGTGTCGTAAAGGCTAAA-GAATTACCAGGTAAAGACT-TAACTGGTAGTT 178
|| ||||| || || || ||||| ||| || ||||| || || || | | ||||||||||
Sbjct 448 CTTTATGTCCGAGTGGTTAAGGC-AAAGGAGTTACCTGGGAAGGA-TATGACTGGTAGTT 505
Query 179 GTGACCCTTACGTTGAAGTTAAGCTTGGTAACTACAGAGGAACCACTAGACATTTCGAGA 238
|||||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 506 GTGACCCTTATGTTGAGGTTAAGCTTGGAAACTACAAAGGAACCACTAGACATTTCGAGA 565
Query 239 AGAAATCTAATCCTGAGTGGAACCAAGTTTTCGCCTTTTCTAAAGATAGGGTACAAGCTT 298
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 566 AGAAATCTAATCCTGAGTGGAACCAAGTTTTCGCCTTTTCTAAAGATAGGATTCAAGCTT 625
Query 299 CTTATC-TTGAAGCTACTGTCAAGGATAAAGAT-TTAGTTAAAGATGATTTGATTGGTCG 356
||| || ||||||||||||||||||| || ||| || || ||||||||||||||||||||
Sbjct 626 CTT-TCCTTGAAGCTACTGTCAAGGACAAGGATGTT-GTGAAAGATGATTTGATTGGTCG 683
Query 357 TGTTGTGTTTGATTTGAATGAGATACCTAAGAGAGTTCCTCCTGATAGTCCTTTAGCTCC 416
||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||
Sbjct 684 GGTTGTGTTTGATTTGAATGAGGTACCTAAGAGAGTTCCTCCTGATAGTCCCTTGGCCCC 743
Query 417 ACAATGGTATAGATTAGAAGATGGGAAAGGCCAAAAAGTTAAAGGAGAGCTTATGTTAGC 476
||||||||||| | || ||| ||||||| | ||||| || |||||||||||| | ||
Sbjct 744 GCAATGGTATAGGCTCGAGGATAGGAAAGGTGATAAAGTCAAGGGAGAGCTTATGCTGGC 803
Query 477 TGTTTGGTTTGGTACTCAAGCTGATGAAGCTTTTCCTGAAGCTTGGCACTCTGATGCTGC 536
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 804 TGTTTGGTTTGGTACTCAAGCTGATGAAGCCTTCCCTGAAGCTTGGCACTCTGATGCTGC 863
Query 537 AACTGTTAGTGGAACTGATGCT-TTAGCTAACATCAGATCTAAGGTTTATCTCTCTCCTA 595
|||||||||||| ||||||||| || || |||||| | || ||||||||||| |||||||
Sbjct 864 AACTGTTAGTGGTACTGATGCTCTT-GCCAACATCCGTTCCAAGGTTTATCTTTCTCCTA 922
Query 596 AGCTTTGGTATCTTAGGGTTAATGTCATTGAAGCTCAGGATTTGATACCGAGCGATAAAG 655
|||||||||| || ||||||||||| ||||||||||| ||||||||||| || ||||| |
Sbjct 923 AGCTTTGGTACCTCAGGGTTAATGTAATTGAAGCTCAAGATTTGATACCAAGTGATAA-G 981
Query 656 GGA-GATATCCTGAAGTCTT-TGTGAAAG-TGATAATGGGAAATCAGGCATTGAGGACTA 712
| |||||||||| || || |||||| | | ||| ||||||| ||||| ||||||||||
Sbjct 982 CAAAGATATCCTGAGGT-TTATGTGAAGGCT-ATAGTGGGAAACCAGGCGTTGAGGACTA 1039
Query 713 GAGTGTCACAAAGCAGGAGTATTAATCCGATGTGGAATGAGGATTTGATGTTTGTTGTAG 772
|||| ||||| ||||||| | |||||||||||||||||||||||||||||||||| | |
Sbjct 1040 GAGTATCACAGAGCAGGACTCTTAATCCGATGTGGAATGAGGATTTGATGTTTGTAGCGG 1099
Query 773 CTGAGCCGTTTGAAGAGCCTTTGATTCTAAGTGTGGAAGATAGAGTTGCGCCGAATAAAG 832
| || || ||||| || |||||||| || || |||||||| |||||||| || || ||||
Sbjct 1100 CAGAACCATTTGAGGAACCTTTGATCCTCAGCGTGGAAGACAGAGTTGCTCCTAACAAAG 1159
Query 833 ATGAAGTCTTGGGGAGATGCGCGGTTCCGTTGCAGTATTTGGACAAAAGGTTTGACTATA 892
||||||||||||||||||| ||| | ||||||||||||||||||| ||| |||||| | |
Sbjct 1160 ATGAAGTCTTGGGGAGATGTGCGATCCCGTTGCAGTATTTGGACAGAAGATTTGACCACA 1219
Query 893 GACCGGTGAACAGCAGGTGGTTTAACCTTGAGAAGCATGTTATAATGGAAGGAGGAGAGA 952
||| |||||||||||||||| |||||| ||||||||| |||| | || |||| ||| |
Sbjct 1220 AACCAGTGAACAGCAGGTGGTATAACCTCGAGAAGCATATTATGGTCGATGGAG-AGA-A 1277
Query 953 AGAAAGAGATCAAATTCGCCAGCAAGATCCACATGAGGATTTGTTTGGAAGGAGGGTATC 1012
||| |||| ||||||||| |||| ||| |||||||| || ||||| |||||||||||||
Sbjct 1278 -GAAGGAGACCAAATTCGCTAGCAGGATTCACATGAGAATCTGTTTAGAAGGAGGGTATC 1336
Query 1013 ATGTGCTTGATGAGTCTACACATTACAGTAGTGACCTAAGACCAACTGC-AAAGCAACTG 1071
| || |||||||||||||| |||||||||||||| || |||||||| || ||| |||||
Sbjct 1337 ACGTTCTTGATGAGTCTACGCATTACAGTAGTGATCTTAGACCAACGGCGAAA-CAACTA 1395
Query 1072 TGGAAGCCTAACATCGGTGTGCTTGAGCTAGGGG-T-CTTAAATGCGACCGGTTTAATGC 1129
||||||||||| ||||||||||| ||| | |||| | || ||||||||| ||| ||||||
Sbjct 1396 TGGAAGCCTAATATCGGTGTGCTGGAGTT-GGGGATACT-AAATGCGACAGGTCTAATGC 1453
Query 1130 CCATGAAAGCTAAAGAAGGTGGTAGGGGAACCACGGACGCGTATTGTGTGGCAAAGTATG 1189
| |||||| ||||||| ||| ||||||||||| || || |||||||||||||||||||
Sbjct 1454 CTATGAAAACTAAAGACGGT---AGGGGAACCACAGATGCATATTGTGTGGCAAAGTATG 1510
Query 1190 GGCAGAAATGGAT-CAGAACTCGGACAATTATTGACAGCTTTACCCCAAGATGGAACGAG 1248
| ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1511 GACAGAAATGGATTC-GAACTCGGACAATCATTGACAGCTTTACCCCAAGATGGAACGAG 1569
Query 1249 CAATATACTTGGGAGGTTTTTGATCCGTGTACTGTAGTTACAGTTGGTGTGTTCGATAAC 1308
||||||||||||||||||||||||||||||||||| ||||| ||||| || || ||||||
Sbjct 1570 CAATATACTTGGGAGGTTTTTGATCCGTGTACTGTTGTTACTGTTGGAGTTTTTGATAAC 1629
Query 1309 TGCCATCTACACGGTGGTGACAAAAACAACGGAGGAGGAAAAGATTCAAGAATTGGAAAG 1368
|||||||| || || ||||| || || ||||||| |||||||||||||||||| |||
Sbjct 1630 TGCCATCTCCATGGAGGTGAGAAGAAT---GGAGGAGCAAAAGATTCAAGAATTGGGAAG 1686
Query 1369 GTGAGGATAAGGCTCTCTACTCTCGAGGCTGATCGAGTCTACACACATTCATATCCTCTT 1428
|| || || ||||| |||||||||||| |||||||||| |||||||||||||| ||||||
Sbjct 1687 GTAAGAATCAGGCTTTCTACTCTCGAGACTGATCGAGTTTACACACATTCATACCCTCTT 1746
Query 1429 TTGGTGCTACATCCTAGTGGAGTCAAGAAAATGGGAGAGATTCACTTAGCGGTGAGGTTT 1488
|||||||| ||||||| |||||||||||||||||||| |||||||| || ||||||||
Sbjct 1747 TTGGTGCTCCATCCTAACGGAGTCAAGAAAATGGGAGAAATTCACTTGGCTGTGAGGTTC 1806
Query 1489 ACTTGCTCTTCATTGCTCAACATGATGTATATGTATTCTA-TGCCTCTCTTACCTAAGAT 1547
||||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||
Sbjct 1807 ACTTGCTCTTCATTGCTCAACATGATGTATATGTACTC-ACTGCCTCTCTTACCGAAGAT 1865
Query 1548 GCACTACCTCCATCCCCTCACGGTTAGCCAGCTCGATAACTTAAGGCATCAAGCAACTCA 1607
||| ||| ||||||| || || ||||||||||| |||||||| ||||||||||| |||||
Sbjct 1866 GCATTACATCCATCCTCTAACTGTTAGCCAGCTTGATAACTTGAGGCATCAAGCGACTCA 1925
Query 1608 GATTGTGTCGACAAGGCTAACACGAGCAGAGCCGCCTTTGAGGAAAGAAGTTGTTGAGTA 1667
|||||| |||| ||| | || |||||||| |||||| | ||||||||||| ||||||||
Sbjct 1926 GATTGTATCGATGAGGTTGACCCGAGCAGAACCGCCTCTAAGGAAAGAAGTAGTTGAGTA 1985
Query 1668 TATGCTTGATGTGGGATCTCACATGTGGAGTATGCGTAGAAGCAAGGCGAA-TTTCTTCA 1726
||||||||||||||| |||||||||||||||||||| |||||||| || || ||| ||||
Sbjct 1986 TATGCTTGATGTGGGTTCTCACATGTGGAGTATGCGGAGAAGCAAAGCAAACTTT-TTCA 2044
Query 1727 GGATAATGGGAGTCTTGAGTGGGATAATCGCTGTAGGGAAATGGTTTGAACAGATCTGCG 1786
|||| |||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct 2045 GGATTATGGGAGTTTTGAGTGGGTTAATCGCAGTAGGAAAATGGTTTGAACAGATCTGCA 2104
Query 1787 TA-TGGAAAAATCCGATAACAACGGTTTTAATCCA-CATTCTC-TTCATTATCCTTGTTA 1843
| ||||| |||||||| ||||| || || ||||| | | || ||||| ||||||||
Sbjct 2105 -ACTGGAAGAATCCGATCACAACAGTCTTGATCCATC-T-CTTGTTCATCATCCTTGTGC 2161
Query 1844 TCTACCCCGAGCTCATCTTGCCCACCATTTTCCTCTACCTCTTCTTGATTGGAGTTTGGT 1903
|||| ||||| || |||||||||||||| ||||||||||||||| | || || || ||||
Sbjct 2162 TCTATCCCGAACTAATCTTGCCCACCATCTTCCTCTACCTCTTCCTCATCGGTGTCTGGT 2221
Query 1904 ACTATCGCTGGAGGCCGAGACATCCTCCACACATGGACACACGTCTCTCACACGCTGACT 1963
| || || ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct 2222 ATTACCGTTGGAGACCGAGGCATCCTCCTCACATGGACACACGTCTCTCTCACGCTGACT 2281
Query 1964 CAGCACACCCTGATGAGCTCGACGAGGAGTTTGACACTTTCCCTACTTCCCGACCATCAG 2023
|||| ||||| || ||||| || || ||||| |||||||| |||||||||||||||||||
Sbjct 2282 CAGCCCACCCCGACGAGCTAGATGAAGAGTTCGACACTTTTCCTACTTCCCGACCATCAG 2341
Query 2024 ACATCGTCAGGATGAGATATGACCGACTCAGAAGCATTGCTGGTAGGATTCAAACAGTTG 2083
|||| || |||||||| |||||| | | || || |||||||| |||||||| ||||| |
Sbjct 2342 ACATTGTTAGGATGAGGTATGACAGGTTGAGGAGTATTGCTGGGAGGATTCAGACAGTGG 2401
Query 2084 TTGGTGATCTTGCAACTCAAGGAGAGAGATTTCAGTCGT-TGCTAAGCTGGCGTGACCCG 2142
| |||||||||||||| |||||||| || ||||||| | |||||||||||||||| |||
Sbjct 2402 TAGGTGATCTTGCAACACAAGGAGAAAGGCTTCAGTC-TCTGCTAAGCTGGCGTGATCCG 2460
Query 2143 CGTGCCACTGCTCTCTTCGTCTTGTTCTGTCT-GATAGCTGCAGTGATTTTATATATAAC 2201
||||| || || ||||||||||||||||| || ||| || ||||| ||| | ||| | ||
Sbjct 2461 CGTGCGACAGCACTCTTCGTCTTGTTCTG-CTTGATTGCCGCAGTTATTCTCTATGTGAC 2519
Query 2202 TCCCTTCCAGGTTGTGGCT-TTTGCCATTGGCTTGTATGTGCTTAGACACCCGAGGCTCA 2260
|| ||||||||||||||| |||| ||||| | ||||| || ||||| |||||| |||
Sbjct 2520 ACCTTTCCAGGTTGTGGCTCTTTGT-ATTGGAATCTATGTTCTGAGACATCCGAGGTTCA 2578
Query 2261 GGTACAAGCTCCCATCAGTTCCACTTAACTTCTTCAGGAGGCTTCCAGCAAGAACTGATT 2320
| ||||| || ||||| ||||| || || ||||||||||||||||| |||||||||||||
Sbjct 2579 GATACAAACTACCATCTGTTCCTCTCAATTTCTTCAGGAGGCTTCCTGCAAGAACTGATT 2638
Query 2321 GCATGCTCTGA 2331
|||||||||||
Sbjct 2639 GCATGCTCTGA 2649
> Ahg488114 jgi|Araly1|488114|fgenesh2_kg.6__1248__AT5G12970.1
Length=2535
Score = 920 bits (498), Expect = 0.0
Identities = 1729/2302 (75%), Gaps = 170/2302 (7%)
Strand=Plus/Plus
Query 90 CACATATGACCTCGTCGAGCAAATGCAGTATCTCTATGTTCGTGTCGTAAAGGCTAAAGA 149
||| ||||| | || ||||| ||||| || ||||| ||||| || || ||||| || ||
Sbjct 315 CACTTATGATTTGGTTGAGCAGATGCATTACCTCTACGTTCGGGTAGTGAAGGCGAAGGA 374
Query 150 ATTACCAGGTAAAGACT-TAACTGGTAGTTGTGACCCTTACGTTGAAGTTAAGCTTGGTA 208
|||||| || ||||| | | || ||||||||||| || || || ||||| ||||| || |
Sbjct 375 ATTACCGGGGAAAGA-TGTGACCGGTAGTTGTGATCCATATGTGGAAGTGAAGCTCGGAA 433
Query 209 ACTACAGAGGAACCACT-AGACATTTCGAGAAGAAATCTAATCCTGAGTGGAACCAAGT- 266
|||||||||| | ||| || ||||| |||||||| || ||||| |||||||| |||||
Sbjct 434 ACTACAGAGGGATGACTAAG-CATTTTGAGAAGAAGTCGAATCCGGAGTGGAAGCAAGTG 492
Query 267 TTTCGCCTTTTCTAAA-GATAGGGTACAAGCTTCTTATCTTGAAGCTACT-GTCAAGGAT 324
||| || ||||| ||| || || | ||||| || |||||| || | | || || ||
Sbjct 493 TTT-GCGTTTTC-AAAGGAGAGAATCCAAGCATC-AATCTTGGAGGTTGTAGTTAAAGAC 549
Query 325 AAAGATTTAGT-TAAAGATGATTTGATTGGTCGTGTTGTGTTTGAT-TTGAATGAGATAC 382
|||||| | || | |||||||| |||||| | | |||||||| || |||||||| |
Sbjct 550 AAAGATGTGGTGT-TGGATGATTTAATTGGTAGAATCATGTTTGATCTT-AATGAGATTC 607
Query 383 CTAAGAGAGTTCCTCCTGATAGTCCTTTAGCTCCACAATGGTATAGATTAGAAGATGGGA 442
||||| ||||||| ||||||||||| || ||||| || |||||||| ||||| ||| ||
Sbjct 608 CTAAGCGAGTTCCGCCTGATAGTCCATTGGCTCCTCAGTGGTATAGGTTAGAGGAT-CGA 666
Query 443 -AAGGCCAAAAAGTTAAAGGAGAGCTTATGTTAGCTGTTTGGTTTGGTACTCAAGCTGAT 501
| || | ||||||||||||||||||||||||||||||||| | || || ||||| |||
Sbjct 667 CATGGGCGTAAAGTTAAAGGAGAGCTTATGTTAGCTGTTTGGATGGGGACACAAGCCGAT 726
Query 502 GAAGCTTT-TCCTGAAGCTTGGCACTCTGATGCTGCAACTGTTAGTGGAACTGATGCTTT 560
|||||||| || ||| |||||||| || ||||| || | ||| | | | |||| | | |
Sbjct 727 GAAGCTTTCTC-TGATGCTTGGCATTCAGATGCAGCCTCGGTT-G-G-ACCTGAAGGTGT 782
Query 561 -A-GCTAACATCAGATCTAAGGTTTATCTCTCTCCTAAGCTTTGGTATCTTAGGGTTAAT 618
| || | ||| | || ||||||||||| || || |||||||||||| | ||||| |||
Sbjct 783 GACGC-AT-ATCCGTTCAAAGGTTTATCTTTCGCCAAAGCTTTGGTATGTGAGGGTCAAT 840
Query 619 GTCATTGAAGCTCAGGATTTGATACCG-AGCGATAAAGGGA-GATATCC-TGAAGTCTTT 675
|| ||||| ||||| ||||||||||| | |||||| | | | ||| ||| || ||
Sbjct 841 GTAATTGAGGCTCAAGATTTGATACCTCAT-GATAAAACCAAG-T-TCCCTGAGGT-TTA 896
Query 676 -GTGAAAGTGATAATGGGAAATCAGGCAT-TGAGGACTA-G-AGTGTCACAAAGCAGGAG 731
||||||| || | ||||| ||| | | |||| || | | | | || || | || |
Sbjct 897 CGTGAAAGCAATGCTCGGAAACCAGAC-TCTGAGAAC-ACGTATT-TCTCAGACCAAAAC 953
Query 732 TATT-AATCCGATGTGGAATGAGGATTTGATGTTTGTTGTAGCTGAGCCGTTTGAAGAGC 790
||| ||||||||||||||||| ||| ||||||||||||| |||||||| ||||| ||||
Sbjct 954 -ATTGAATCCGATGTGGAATGAAGATCTGATGTTTGTTGTTGCTGAGCCTTTTGAGGAGC 1012
Query 791 CTTTGATTCTAAGTG-TGGAAGATAGAGTTGCGCCGAATAAAGATGAAGTC-TTGGGGAG 848
| |||||||| | | |||||||||| ||||| ||||| ||||||||| | || || ||
Sbjct 1013 CATTGATTCTC-GCGGTGGAAGATAGGGTTGCACCGAACAAAGATGAAA-CGTTAGGCAG 1070
Query 849 ATGCGCGGTTCCGTTGCAGTATTTGGACAA-AAGGTTTGACTATAGACCGGTGAACA-GC 906
|| || | ||||||||| || | | || |||||| ||| |||| ||| | ||| |
Sbjct 1071 GTGTGCAATCCCGTTGCAGAATGTCCA-AAGAAGGTTAGACCATAGGCCGCTTAACTCG- 1128
Query 907 AGGTGGTTTAACCTTGAGAAGCATGTTATAATGGAAGGAGGAGAGAAGAAAGAGATCAAA 966
|||||||| ||||| ||||| ||| |||| ||||||||| ||| || ||||||||||||
Sbjct 1129 AGGTGGTTCAACCTGGAGAAACATATTATGGTGGAAGGAG-AGA-AA-AAAGAGATCAAA 1185
Query 967 TTCGCCAGCAAGATCCA-CATGAGGAT-TTGT-TTGGAAGGAGGGTATCATGTGCTTGAT 1023
||||| |||| ||| || | | || || || | ||| |||| || || ||||| ||||||
Sbjct 1186 TTCGCAAGCAGGATTCATC-TAAGAATCTT-TCTTG-AAGGTGGATACCATGTTCTTGAT 1242
Query 1024 GAGTCTACACATTACAGTAGTGACCTAAGACCAACTGCAAAGCAACTGTGGAAGCCTAA- 1082
|| || || || ||||| || |||||||| ||||| ||||| || || ||||| || ||
Sbjct 1243 GAATCAACTCACTACAGCAGCGACCTAAGGCCAACCGCAAAACAGCTATGGAAACC-AAG 1301
Query 1083 CATCGGTGTGCTTGA-GCTAGGGGTCTTAAATGCG-ACCGGTTTAATGCCCATGAA-AGC 1139
|||||| ||||||| | ||||| || ||| |||| || || | ||||| ||||| | |
Sbjct 1302 CATCGGACTGCTTGAAG-TAGGGATCATAAGTGCGCAC-GGACTGATGCCAATGAAGA-C 1358
Query 1140 TAAAGAAGGTGGTAGGGGAACCACGGACGCGTATTGTGTGGCAAAGTATGGGCAGAAATG 1199
||||| || | |||||| | || || || ||||||||||| |||||||||||||||||
Sbjct 1359 AAAAGATGG-GA-AGGGGA-CAACAGATGCATATTGTGTGGCTAAGTATGGGCAGAAATG 1415
Query 1200 GATCAGAACTCGGACAATTATTGACAGCTTTACCCC-AAGATGGAACGAGCAATATACTT 1258
||||||||| | |||||| | || || ||||| || || |||||||||||| || || |
Sbjct 1416 GATCAGAACAAGAACAATTGTCGATAGTTTTACGCCTAA-ATGGAACGAGCAGTACACAT 1474
Query 1259 GGGAGGTTTTTGAT-CCGTGTACTGT-AGTTACAGTTGGTGTGTTCGATAACTGCCATCT 1316
|||| || |||||| || || ||||| | | || |||| | ||||| ||| | | |
Sbjct 1475 GGGAAGTGTTTGATACC-TGCACTGTCA-TAACTTTTGGAGCATTCGACAACGG--A-C- 1528
Query 1317 ACACGGTGGTGACAAAAACAACGGAGGAGGAAAAGATTCAAGAATTGG-AAAGGTGAGGA 1375
||| | | || | ||| | |||||||||| ||||| || |||| |||| |
Sbjct 1529 ACA---T--TC-CAGGA-----GGAAGCGGAAAAGATTTGAGAATCGGGAAAG-TGAGAA 1576
Query 1376 TAAGGCTCTCTACTCTCGAGGCTGATCG-AGTCTACACACATTCATATCCTCTTTTGGTG 1434
| | ||||| || || || ||||| || | ||||||||||||||||||| || | ||
Sbjct 1577 TCCGTCTCTCGACCCTTGAAGCTGACCGTA-TCTACACACATTCATATCCGCTGCTCGT- 1634
Query 1435 CTA-CATCCTAGTGG-AGTCAAGAAAATGGGAGAGATTCACTTAGCGGTGAGGTTTACTT 1492
|| |||||| || | ||||||| | || || || || ||||| ||| |||| ||||
Sbjct 1635 CTTTCATCCTTCCGGGA-TCAAGAAGACAGGTGAAATACAATTAGCCGTGCGGTTCACTT 1693
Query 1493 GCTCT-TCAT-TGC-TCAACATGATGT-ATATGTATTCT-ATGCC-TCT-CTTACCTAAG 1545
|| || || | | | |||||||| | | ||||||||||| | ||| | | || ||| ||
Sbjct 1694 GC-CTATC-TCT-CATCAACATGCT-TCATATGTATTCTCA-GCCAT-TACT-ACCCAAA 1746
Query 1546 ATGCACTACCTCCATCCCCTCA-CGGTTAGCCAGCTCGATAACTTAAGGCATCAAGCAAC 1604
||||| ||| |||| ||| | | ||||| |||||| || | | | | || || || |
Sbjct 1747 ATGCATTACATCCA-CCCGTTATCGGTTCTCCAGCTGGACAGCCTGCGACACCAGGCGA- 1804
Query 1605 TCAG-ATTGTGTCGACAAGGCT-AACACGAGCAGAGCCGCCT-TTGAGGAAAGA-AGTTG 1660
| | ||||| ||| | ||||| ||| || |||||||| ||| || | ||||| | |||
Sbjct 1805 TGAACATTGTCTCGGCGAGGCTGAAC-CGCGCAGAGCCACCTCTTC-GCAAAGAGA-TTG 1861
Query 1661 TTGAGTATATGCTTGATGTGGGA-TCTCACATGTGGAGTATGCGTAGAAGCAAGGCGAAT 1719
| ||||| ||||| ||||| | | || || |||||||| ||| | || || || || ||
Sbjct 1862 TAGAGTACATGCTCGATGTTG-ACTCCCATATGTGGAGCATGAGGAGGAGTAAAGCTAAC 1920
Query 1720 TTCTTCAGGATAATGGGA-GT-CTTGAGTGGGATAATCGCTGTAGGGAAATGGTTTGAAC 1777
|||||||| || ||| | || || |||||| | || ||||| || ||||||||||| |
Sbjct 1921 TTCTTCAGAATCATGA-ATGTTCT-GAGTGGTCTCATTGCTGTTGGAAAATGGTTTGATC 1978
Query 1778 AGATCTGCGTA-TGGAAAAATCCGATAACAACGGTTTTAATCCACATTCTCTTCATTATC 1836
|||||||| | |||| ||| || ||||| || || | || || |||| |||||||||
Sbjct 1979 AGATCTGCA-ACTGGAGAAACCCAATAACCACAATTCTCATTCATGTTCTTTTCATTATC 2037
Query 1837 CTT-GTTATCTACCCCGAGCTCATCTTGCCCACCA-TTTTCCTCTACCTCTTCTTGATTG 1894
|| ||| ||||||| || |||||| | |||| | ||||| | ||||| |||||||| |
Sbjct 2038 -TTAGTTCTCTACCCGGAACTCATCCT-CCCAACGGTTTTCTTGTACCTTTTCTTGATCG 2095
Query 1895 GAGTT-TGGTACTATC-GCTGGAGGCCGAGACATCCTCCACACATGGACACACG-TCTCT 1951
| | | ||| | | || | ||||| || || || || ||||||||||||||| | | | |
Sbjct 2096 G-GATCTGGAATT-TCCGGTGGAGACCAAGGCACCCGCCACACATGGACACAAGGT-TGT 2152
Query 1952 CACACGCTGACTCAG-CACACCCTGATGAGCTCGACGAGGAGTTTGACACTTTCCCTACT 2010
| ||||| ||| | | | ||||| |||||||| || || |||||||| |||||||| |||
Sbjct 2153 CCCACGCAGACGCTGTC-CACCCCGATGAGCTTGATGAAGAGTTTGATACTTTCCCAACT 2211
Query 2011 TCCCGA-CCATCAGACATCGTCAGGATGAGATATGACCGACTCAGAAGCATTGCTGGTA- 2068
|||||| || || || || || |||||| |||||||||| ||||||||||| | || |
Sbjct 2212 TCCCGATCC-TCTGAGATTGTGAGGATGCGATATGACCGGCTCAGAAGCATAGGGGG-AC 2269
Query 2069 GGATTCAAACAGTTGTT-GGTGATCTTGCAACTCAAGGAGAGAGATTTC-AGTCGTTGCT 2126
|| |||| || || | | || ||||| || || || |||||| | ||| | ||| ||||
Sbjct 2270 GGGTTCAGACCGT-GATAGGCGATCTAGCGACACAGGGAGAGCGGTTTTTA-TCGCTGCT 2327
Query 2127 AAGCTGGCGTGACCCGCGTGCCACTGC-TCTCTTCGT-CTTGTTCTGTCTGATAGCTGC- 2183
|||||||| |||||| | || || | | | || || || |||||||| ||||||||
Sbjct 2328 GAGCTGGCGAGACCCGAGGGCAACCACAT-TGTTTGTGCTC-TTCTGTCTCATAGCTGCT 2385
Query 2184 A--GTGATTTTATATATAACTCCCTTCCAGGTTGTGGC--TT-TTGCCATTGGCTTGTAT 2238
| ||| || ||| | || | || || |||||||| || || |||| | || | |||
Sbjct 2386 ATCGTG-TTGTATGT-TA-CACCGTTTCAGGTTGTTGCACTTCTTGC--TGGGATC-TAT 2439
Query 2239 GTGCTTAGACACCCGAGGCTCAGGTACAAGCT-CCCATCAGTTCCACTTAA-CTTCTTCA 2296
||||| || || || ||| ||||| ||||||| ||| || || || || || || |||||
Sbjct 2440 GTGCTGAGGCATCCAAGGTTCAGGCACAAGCTACCC-TCTGTGCCGCTCAATCT-CTTCA 2497
Query 2297 GGAGGCTTCCAGCAAGAACTGA 2318
||||||| || |||||| ||||
Sbjct 2498 GGAGGCTACCTGCAAGATCTGA 2519
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94958980785
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5