BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G52260.1
Length=1837
Score E
Sequences producing significant alignments: (Bits) Value
Ahg337380 jgi|Araly1|337380|fgenesh1_pg.C_scaffold_1003945 2390 0.0
Ahg479065 jgi|Araly1|479065|fgenesh2_kg.3__1766__AT3G16110.1 1094 0.0
Ahg907723 jgi|Araly1|907723|Al_scaffold_0002_804 233 3e-60
> Ahg337380 jgi|Araly1|337380|fgenesh1_pg.C_scaffold_1003945
Length=1611
Score = 2390 bits (1294), Expect = 0.0
Identities = 1513/1619 (93%), Gaps = 13/1619 (1%)
Strand=Plus/Plus
Query 125 ATGTCGTTAATTCCAAAACCCA-TATCAAAAGTCTCTACCTTTACCTTCATTCTCCTCAT 183
|||||||||||| ||||||||| | || |||||||| ||||||||||||||||||||| |
Sbjct 1 ATGTCGTTAATTTCAAAACCCACT-TCTAAAGTCTCCACCTTTACCTTCATTCTCCTCTT 59
Query 184 ACTCCTCAGTTTCACAATCATCATCGCTTACTCATCACCCGATTCCAATGTCGAATCAAA 243
|||| |||||||| ||||||| |||||||||||||||||||| ||||| ||||| ||||
Sbjct 60 ACTCTTCAGTTTCGTAATCATCGTCGCTTACTCATCACCCGATACCAATCTCGAAGCAAA 119
Query 244 CGAACCCGGATTCGATTCCGATCTAGACCAGCTTCTAGCAGTAGACGAGCAACTACAAGA 303
||||||||||| ||| ||||||||||| |||||||||||||||||||| || |||||||
Sbjct 120 CGAACCCGGATCCGACTCCGATCTAGAACAGCTTCTAGCAGTAGACGAACAGTTACAAGA 179
Query 304 AGATCGACCTGAGCAACAATCAGAAGCCGAAACAGTAAGCAAAGCTCAGAGAATCGTACT 363
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 180 AGATCGACCTGAGCAACAATCAGAAGCCGAAACAGTGAGCAAAGCTCAGAGAATCGTACT 239
Query 364 AGAGCTCAACGGTGATTACACGAAGCGAGTGATCGATGGAAACGAGTTCGTGATGGTGT- 422
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 240 GGAGCTCAACGGTGATAACACGAAGCGAGTGATCGATGGAAACGAGTTCGTGATGGT-TC 298
Query 423 TAGGGTACGCGCCTTGGTGTGCGAGAAGTGCGGAGCTTATGCCGAGATTCGCGGAAG-CT 481
|||| ||||| |||||||| || ||||| ||||||||||||||| ||||||||| || ||
Sbjct 299 TAGGTTACGCACCTTGGTGCGCAAGAAGCGCGGAGCTTATGCCGCGATTCGCGG-AGTCT 357
Query 482 GCGACGGCTTTGAAAGAGATTGGGAGTTCGGTTTTGATGGCTAAGATTGACGGTGATAGG 541
|| ||||||||||| ||||| || ||| || |||||||||||||||||||||||||||||
Sbjct 358 GCAACGGCTTTGAAGGAGATAGGTAGTCCGATTTTGATGGCTAAGATTGACGGTGATAGG 417
Query 542 TATTCGAAGATTGCATCGGAGCTTGAGATTAAAGGTTTCCCTACGCTTCTTCTCTTTGTT 601
||||||||||| |||||||||||||||||||| || |||||||||||| || ||||||||
Sbjct 418 TATTCGAAGATCGCATCGGAGCTTGAGATTAAGGGCTTCCCTACGCTTGTTTTCTTTGTT 477
Query 602 AATGGCACTTCTCTTACTTACAATGGTGGATCTTCTGCGGAGGATATAGTCATTTGGGTG 661
|||||||| |||| |||||||||||||||||||| || |||||||||||||||||||||
Sbjct 478 AATGGCACATCTCAGACTTACAATGGTGGATCTTCCGCAGAGGATATAGTCATTTGGGTG 537
Query 662 CAAAAGAAGACTGGTGCACCAATCATTACACTTAATACAGTTGATGAAGCTCCGAGATTT 721
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 538 CAAAAGAAGACTGGTGCACCAATCATTACACTTAATACAGTTGATGAAGCTCAAAGATTT 597
Query 722 CTTG-ACAAGTATCATACTTTTGTTCTTGGTCTGTTTGAGAAGTTTGAGGGTTCTGAGCA 780
| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 598 C-TGAACAAGTATCATACTTTTGTTCTTGGACTGTTTGAGAAGTTTGAGGGTTCTGAACA 656
Query 781 TAACGAATTTGTTAAAGCTGCTAAATCAGACGATGAAATACAGTTTATAGAAACACGTGA 840
||| ||||| ||||||||||| |||||||| || ||||| |||||| |||||||| | |
Sbjct 657 TAATGAATTCGTTAAAGCTGCAAAATCAGATGACGAAATCCAGTTTGTAGAAACAAGCGG 716
Query 841 TAGCGATGTTGCGAAACTTCTTTTTCCTGATC-TTAAAAGCAATAATGTGTTTATTGGGT 899
||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||
Sbjct 717 CAGCGATGTTGCGAAACTTCTTTTTCCTGA-CTTTAAAACCAATAATGTGTTTATTGGGA 775
Query 900 TGGTTAAACCTGAGGCTGAAAGGTACACTGTATATGATGGATCTTACAAAATGGAGAAGA 959
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 TGGTTAAAAATGAGGCTGAAAGGTACACTGTATATGATGGATCTTACAAAATGGAGAAGA 835
Query 960 TATTAGAGTTTCTAGGCAGCAACAAGTTTCCATTGTTTACAAAATTGACTGAAACCAATA 1019
|||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 836 TATTGGAGTTTCTAGGCAGCAACAAGTTTCCGTTGATTACAAAATTGACTGAAACCAATA 895
Query 1020 CTGTTTGGGTTTACTCTAGTCCTGTTAAGCTTCAGGTTATGCTCTTCTCCAAGGCTGATG 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 CTGTTTGGGTTTACTCTAGTCCTGTTAAGCTTCAGGTTATGCTCTTCTCCAAGGCTGATG 955
Query 1080 ATTTTCAGAAACTTGCTCAGCCTCTTGAAGATATTGCAAGGAAATTTAAATCGAAGCTTA 1139
| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 956 ACTTTCAGAAACTTTCTCAGCCTCTTGAAGATATTGCAAGAAAATTTAAATCGAAGCTTA 1015
Query 1140 TGTTTATATATGTCGATATAACAAATGAGAACCTTGCAATGCCATTCTTGATCTTATTCG 1199
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1016 TGTTTATATATGTCGATATAACAAATGAGAACCTTGCAATGCCATTCTTGACCTTATTCG 1075
Query 1200 GAATTGAAGCTGGGAATAAAACTGTTGTTGCTGCTTTTGATAACAACCTGAACTCCAAGT 1259
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1076 GAATAGAAGCTGGGAATAAAACTGTTATTGCTGCTTTTGATAACAACCTGAACTCCAAGT 1135
Query 1260 ATTTGCTCGAGTCAGATCCATCACCAAACAGTATAGAAGAGTTTTGTTCAGGACTTGCTC 1319
|||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1136 ATTTGCTCGAATCAGTTCCATCACCAAACAATATAGAAGAGTTTTGTTCAGGACTTGCTC 1195
Query 1320 ATGGAACTGTTTCACGTTACTATAGGTCAGAGCCAGTTCCTGATAATGAAAACGCAAGCA 1379
||||| |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 1196 ATGGAGCTGTTTCACGCTACTATAAGTCAGAGCCAGTTCCAGATAATGAAAACGCAAGCA 1255
Query 1380 TAGTGACTGTGGTAGGAAAGACTTTTGATGGGTTGGTATTAAACAGCCGCGAGAATGTTC 1439
||||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||
Sbjct 1256 TAGTGACTGTGGTGGGAAAGACTTTTGATGAGTTGGTATTAAGCAGTCGCGAGAATGTTC 1315
Query 1440 TTCTTGAGGTACATACACCGTGGTGCGTGAACTGCGAGGCACTAAGCAAACAAATCGAGA 1499
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 1316 TTCTTGAGGTACATACACCGTGGTGCGTGAACTGCGAGGCACTGAGCAAACAAGTCGAGA 1375
Query 1500 AATTGGCTAAGCATTTCAAAGGCTTTGAGAATCTTGTTTTTGCAAGAATTGATGCATCTG 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1376 AATTGGCTAAGCATTTCAAAGGCTTTGAGAATCTTGTTTTTGCAAGAATTGATGCATCTG 1435
Query 1560 CAAATGAGCATACTAAACTACAGGTTGATGATAAATATCCGATAATCTTGCTCTACAAAT 1619
|||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||
Sbjct 1436 CAAATGAGCATACTAAACTACAGGTTGATGATGAATATCCGATGATTTTGCTCTACAAAT 1495
Query 1620 CTGGCGAAAAGGAGAAACCGTTAAAGCTATCAACGAAATTGAGCGCGAAGGACATAGCTG 1679
|||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct 1496 CTGGTGAAAAGGAGAAACCGTTAAAGCTATCAACGAAATTGAACGCAAAGGACATGGCTG 1555
Query 1680 TTTTTATCAACGAAGAGTTGTTGAAACCGAAGAATGGGTCTGCTAAAGATGAATTGTAG 1738
|||||||||||||||||||| ||||| ||| |||| |||||||||||||||||||||
Sbjct 1556 TTTTTATCAACGAAGAGTTG---AAACCAAAGGATGGATCTGCTAAAGATGAATTGTAG 1611
> Ahg479065 jgi|Araly1|479065|fgenesh2_kg.3__1766__AT3G16110.1
Length=1674
Score = 1094 bits (592), Expect = 0.0
Identities = 1220/1517 (80%), Gaps = 68/1517 (4%)
Strand=Plus/Plus
Query 262 CGATCTAGACCAGCTTC-TAGCAGTAGACGAGCAACTACAAGAAGATCGACCTGAGCAAC 320
|||||| || |||| || |||| || || || ||| | || ||||| |||| |||||||
Sbjct 141 CGATCTGGAGCAGC-TCTTAGCGGTGGATGAACAATTGCAGGAAGAGAGACCAGAGCAAC 199
Query 321 AATCAGAAGCCGAAACAGTAAGCAAAGCTCAGAGAATCGTACTAGAGCTCAACGGTGATT 380
|||| ||||| || || || ||||| || ||||| || || | || ||||| || ||
Sbjct 200 AATCTGAAGCGGAGACGGTGAGCAAGGCGCAGAGGATTGTGGTGGAACTCAATGGAGACA 259
Query 381 ACACGAAGCGAG-TGATCGATGGAAACGAGT-TCGTGATGGTGTTAGGGTACGCGCCTTG 438
|||||||||| | |||| ||||| || |||| | |||||||| ||||| |||||||| ||
Sbjct 260 ACACGAAGCG-GTTGATTGATGGGAATGAGTAT-GTGATGGTTTTAGGTTACGCGCCGTG 317
Query 439 GTGTGCGAGAAGTGCGGAGCTTATGCCGAGATTCGCGGAAGCTGCGACGGCTTTGAAAGA 498
||||||||| ||||| ||||| ||||||||||| ||||| || ||||||| |||||| ||
Sbjct 318 GTGTGCGAGGAGTGCTGAGCTAATGCCGAGATTTGCGGAGGCGGCGACGGATTTGAAGGA 377
Query 499 GATTGGGAGTTCGGTTTTGATGGCTAAGATTGACGGTGATAGGTATTCG-AAGATTGCAT 557
|||||| |||||||||||||||||||||||||||||||| ||||||||| ||| | || |
Sbjct 378 GATTGGTAGTTCGGTTTTGATGGCTAAGATTGACGGTGAGAGGTATTCGAAAG-TGGCGT 436
Query 558 CGGAGCTTGAGATTAAAGGTTTCCCTACGCTTCTTCTCTTTGTTAATGGCACTTCTCT-T 616
|| |||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |
Sbjct 437 CGCAGCTTGAGATTAAAGGTTTCCCAACGCTTCTTCTGTTTGTTAATGGCACATCTCAGT 496
Query 617 ACTTACAATGGTGGATCTTC-TGCGGAGGATATAGTCATTTGGGTGCAAAAGAAGACTGG 675
|||| | |||||||| ||| | | ||||| ||||| |||||||| ||||||||||||||
Sbjct 497 -CTTATACTGGTGGATTTTCCT-CAGAGGAGATAGTGATTTGGGTACAAAAGAAGACTGG 554
Query 676 TGCACCAA-TCATTACACTTAATACAGTTGATGAAGCTCCGAG-ATTTCTTGAC-AAGTA 732
|| || | | |||| |||| ||||||||||| ||||| | || |||||| || ||| |
Sbjct 555 TGTGCCTACT-ATTAAACTTGATACAGTTGATAAAGCTTC-AGGATTTCT-GAAGAAGCA 611
Query 733 TCATACTTTTGTTCTTGGTCTGTTTGAGAAGTTTGAGGGTTCTGA-GCATA--ACGAATT 789
|||||||| | || ||||||| || | |||| ||||| |||| | ||| | |||||
Sbjct 612 TCATACTTATATTGTTGGTCTATTCAAAAAGTCTGAGGATTCTTCTGGATATGATGAATT 671
Query 790 TGTTAAAGCTGC-TAAATCAGACGATGAAATACAGTTTATAGAAACACGT-GATAGCGAT 847
||| |||||||| | | |||| ||||||| |||||| |||||||| | | || |||
Sbjct 672 TGTAAAAGCTGCGTCGTT-AGACAATGAAATCCAGTTTGTAGAAACAAGCAGC-AGTGAT 729
Query 848 GTTGCGAAACTTCTTTTTCCTGATCTTAAAAGCAATAATGTGTTTATTGGGTTGGTTAAA 907
||||| || ||||| || ||| | | ||||| ||||||||||||| |||| |||||||||
Sbjct 730 GTTGCTAAGCTTCTCTTCCCTAACCCTAAAACCAATAATGTGTTTGTTGGCTTGGTTAAA 789
Query 908 CCTGAGGCTGAAAGGTACACTG--TA---TA---T----GATG--G-ATCT-TACAAAAT 951
||||||||||||||||||||| || || | |||| | |||| | |||
Sbjct 790 ACTGAGGCTGAAAGGTACACTGCATACGGTAAGCTCCTTGATGATGGATCTCTCCAAGCC 849
Query 952 GGAGAAGATATTAGAGTTTCT-AGGCAGCAACAAGTTTCCATTGTTTACAAAATTGACTG 1010
| | |||||||| || ||||| | ||| || || || || ||| |||||||||||||||
Sbjct 850 GAA-AAGATATTGGAATTTCTGAA-CAGTAATAAATTCCCTTTGGTTACAAAATTGACTG 907
Query 1011 AAACCAATACTGTTTGGGTTTACT-CTAGTCCTGTTAAGCTTCAGGTTATGCTCTTCTCC 1069
|| |||| || ||| | ||||| | | ||||| || ||||||||||||||| |||| ||
Sbjct 908 AATCCAACACCGTTCGTGTTTA-TGCCAGTCCAGTCAAGCTTCAGGTTATGGTCTTTTCA 966
Query 1070 AAG-GCTGATGATTTTCAGAAA-CTTGCTCAGCCTCTTGAAGATATTGCAAGGAAATTTA 1127
||| | |||||| ||| ||| |||||||||||||| ||| |||||||||| ||| ||
Sbjct 967 AAGAG-TGATGACTTTG-GAAGTCTTGCTCAGCCTCTAGAAAATATTGCAAG-AAAGTTC 1023
Query 1128 A-ATCGAAGCTTATGTTTATATATGTCGATATAACAAATGAGAACCTTGCAATGCCATTC 1186
| ||| ||||||||| | |||||| | || ||| ||||||| ||||| ||||||||||||
Sbjct 1024 ATATCAAAGCTTATGCTGATATATATTGACATATCAAATGAAAACCTCGCAATGCCATTC 1083
Query 1187 TTGATC-TTATTCGGAATTGAAGCTGGGAATAAAACTGTTGTTGCTGCTTTTGATAACAA 1245
|||| | || ||||| || |||| || || ||||||||||||||||| || || |||||
Sbjct 1084 TTGA-CATTGTTCGGGATAGAAGATGCAAAGAAAACTGTTGTTGCTGCGTTCGACAACAA 1142
Query 1246 CCTGAACTCCAAGTATTTGCTCGAGTCAGATCCATCACCAAACAGTATAGAAGAGTTTTG 1305
| |||||||||||| |||||| ||||| |||||||| || | || ||||||||| |||||
Sbjct 1143 CTTGAACTCCAAGTTTTTGCTTGAGTCGGATCCATCTCCTAGCAATATAGAAGAATTTTG 1202
Query 1306 TT-CAGGACTTGCTCATGGAACTGTTTCACGTTACTATAGGTCAGAGCCAGTTCCTGATA 1364
|| | |||||||| |||||||||||||||| |||||||| |||| ||||| |||| ||||
Sbjct 1203 TTTC-GGACTTGCGCATGGAACTGTTTCACCTTACTATAAGTCACAGCCAATTCCAGATA 1261
Query 1365 ATGAAAACGCAAGCATAGTGACTGTGGTAGGAAAGACTTTTGATGGGTTGGTATTAAACA 1424
|| |||| |||||| ||||| ||||||| || | ||||||||||| |||| || || |
Sbjct 1262 ATCAAAATGCAAGCGTAGTGGCTGTGGTCGGCAGGACTTTTGATGAACTGGTCTTGAAGA 1321
Query 1425 GCCGCGAGAATGTTCTTCTTGAGGTACATACACCGTGGTGCGTGAACTGCGAGGCACTAA 1484
|| |||||||||||||||||||||| || ||||| ||||| | ||||| ||||| || |
Sbjct 1322 GCAGCGAGAATGTTCTTCTTGAGGTGCACACACCATGGTGTATTAACTGTGAGGCTCTGA 1381
Query 1485 GCAAACAAATCGAGAAA-TTGGCTAAGCA-TTTCAAAGGCTTTGAGAATCTTGTTTTTGC 1542
| ||||| | || ||| ||| | || || |||||| || ||||||||||||||||||||
Sbjct 1382 GTAAACAGGTTGA-AAAGTTGTCGAAACACTTTCAAGGG-TTTGAGAATCTTGTTTTTGC 1439
Query 1543 AAGAATTGATGCATCTGCAAATGAGCATACTAAACTA-CAGGTTGATGATAAATATCCGA 1601
||| || || || |||||||| |||||| |||| ||| | |||||||||| |||||||
Sbjct 1440 AAGGATAGACGCTTCTGCAAACGAGCATCCTAAGCTAAC-GGTTGATGAT---TATCCGA 1495
Query 1602 TAATCTTGCTCTACAAATCTGGCGAAAAGGAGAAACCGTTAAAGCTATCAACGAAATTGA 1661
||||||||| |||||| | || ||||||||||| ||||||||||| || ||||||| |
Sbjct 1496 CAATCTTGCTTTACAAAGCCGGTGAAAAGGAGAATCCGTTAAAGCTTTCGACGAAATCCA 1555
Query 1662 GCGCGAAGGACATAGCTGTTTTTATCAACGAAGAGTTGTTGAAACCGAAGAATGGGTCTG 1721
| || ||||| || |||||||| |||||| |||||||| ||| ||||| || |||||
Sbjct 1556 GTGCAAAGGAAATGGCTGTTTTAATCAACAAAGAGTTG---AAATCGAAGGATCCGTCTG 1612
Query 1722 CTAAAGATGAATTGTAG 1738
|||||||||| || |||
Sbjct 1613 CTAAAGATGAGTTATAG 1629
> Ahg907723 jgi|Araly1|907723|Al_scaffold_0002_804
Length=7431
Score = 233 bits (126), Expect = 3e-60
Identities = 160/177 (90%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 761 AAGTTTGAGGGTTCTGAGCATAACGAATTTGTTAAAGCTGCTAAATCAGACGATGAAATA 820
||||||||||||||||| ||||||||||| || |||||||| |||||||| ||||||||
Sbjct 5803 AAGTTTGAGGGTTCTGAACATAACGAATTCGTGAAAGCTGCAAAATCAGATGATGAAATC 5862
Query 821 CAGTTTATAGAAACACGTGATAGCGATGTTGCGAAACTTCTTTTTCCTGATCTTAAAAGC 880
|||||| |||||||| | || | |||||||||||||||||| ||||||| |||||||||
Sbjct 5863 CAGTTTTTAGAAACAAGCGACAACGATGTTGCGAAACTTCTAATTCCTGACCTTAAAAGC 5922
Query 881 AATAATGTGTTTATTGGGTTGGTTAAACCTGAGGCTGAAAGGTACACTGTATATGAT 937
| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 5923 AGTAATGTGTTTATTGGGATGGTTAAAACTGAGGCTGAAAGGTACACTGTATATGAT 5979
Score = 145 bits (78), Expect = 1e-33
Identities = 80/81 (99%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 1055 GTTATGCTCTTCTCCAAGGCTGATGATTTTCAGAAACTTGCTCAGCCTCTTGAAGATATT 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6082 GTTATGCTCTTCTCCAAGGCTGATGATTTTCAGAAACTTGCTCAGCCTCTTGAAGATATT 6141
Query 1115 GCAAGGAAATTTAAATCGAAG 1135
||||| |||||||||||||||
Sbjct 6142 GCAAGAAAATTTAAATCGAAG 6162
Score = 126 bits (68), Expect = 5e-28
Identities = 85/93 (91%), Gaps = 2/93 (2%)
Strand=Plus/Plus
Query 640 GGAGGATATAGTCATTTGGGTGCAAAAGAAGACTGGTGCACCAATCATTACACTTAATAC 699
||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 5715 GGATGATATAGTAATTTGGGCGCAAAAGAAGACTGGTGCACCAATCATTACACTTAATTC 5774
Query 700 AGTTGATGAAGCTCCGAGATTTCTTGA-CAAGT 731
||||| |||||||| ||||||||| || |||||
Sbjct 5775 AGTTGTTGAAGCTCAGAGATTTCT-GAACAAGT 5806
Score = 87.9 bits (47), Expect = 2e-16
Identities = 51/53 (96%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 935 GATGGATCTTACAAAATGGAGAAGATATTAGAGTTTCTAGGCAGCAACAAGTT 987
||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 6032 GATGGATCTTACAAAATGGAGAAGATATTGGAGCTTCTAGGCAGCAACAAGTT 6084
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68981433695
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5