BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G52360.2
Length=3099
Score E
Sequences producing significant alignments: (Bits) Value
Ahg474357 jgi|Araly1|474357|fgenesh2_kg.1__4311__AT1G52360.1 4835 0.0
Ahg479052 jgi|Araly1|479052|fgenesh2_kg.3__1753__AT3G15980.3 3517 0.0
Ahg927512 jgi|Araly1|927512|scaffold_203073.1 1901 0.0
> Ahg474357 jgi|Araly1|474357|fgenesh2_kg.1__4311__AT1G52360.1
Length=3337
Score = 4835 bits (2618), Expect = 0.0
Identities = 2777/2853 (97%), Gaps = 14/2853 (0%)
Strand=Plus/Plus
Query 213 CCGCTCAGACTCGAGATCAAGAGAAAATTAGCGCAAAGGTCTGAGAGAGTTAAATCTGTG 272
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 123 CCGCTCAGACTCGAGATCAAGAGAAAATTAGCTCAAAGGTCCGAGAGAGTTAAATCTGTG 182
Query 273 GATCTTCATCCTACAGAACCATGGATTCTTGCAAGTTTGTATTCTGGAACCTTGTGTATT 332
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 GATCTGCATCCTACTGAACCATGGATTCTTGCAAGTTTGTATTCTGGAACCTTGTGTATT 242
Query 333 TGGAACTACCAGACGCAGGTGATGGCAAAATCCTTTGAGGTGACTGAATTACCAGTTCGG 392
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 243 TGGAACTACCAGACACAGGTGATGGCAAAATCCTTTGAGGTGACCGAATTACCAGTTCGG 302
Query 393 TCAGCCAAGTTTGTAGCACGAAAGCAATGGGTTGTCGCAGGAGCTGATGATATGTATATC 452
|| ||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 303 TCGGCCAAGTTTATAGCACGAAAGCAGTGGGTTGTGGCAGGAGCTGATGATATGTATATC 362
Query 453 CGTGTATACAATTACAACACCATGGACAAGGTTAAAGTGTTTGAGGCTCATTCAGACTAC 512
||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||
Sbjct 363 CGTGTATACAATTACAATACCATGGACAAGGTTAAAGTCTTTGAGGCTCATTCTGACTAC 422
Query 513 ATTAGGTGTGTGGCTGTTCATCCAACCCTTCCATATGTGCTGTCATCTTCTGATGATATG 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 ATTAGGTGTGTGGCTGTTCATCCAACCCTTCCATATGTGCTGTCATCTTCTGATGATATG 482
Query 573 CTCATAAAGCTTTGGGACTGGGAAAAGGGTTGGGCTTGCACTCAGATATTCGAGGGACAC 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 483 CTCATAAAGCTTTGGGACTGGGAAAAGGGTTGGGCTTGCACTCAGATATTCGAGGGACAC 542
Query 633 TCACACTATGTGATGCAAGTCACATTTAATCCAAAAGACACCAACACTTTTGCCAGTGCA 692
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 543 TCGCACTATGTGATGCAAGTTACATTTAATCCAAAAGACACCAACACTTTTGCCAGTGCA 602
Query 693 TCCCTTGATCGTACCATAAAGATTTGGAATCTTGGTTCCCCAGACCCAAATTTTACATTG 752
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 TCACTTGATCGTACCATAAAGATTTGGAATCTTGGTTCCCCAGACCCAAATTTTACATTG 662
Query 753 GATGCCCATCAGAAAGGAGTAAATTGTGTAGATTATTTCACCGGTGGTGATAAGCCCTAT 812
||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct 663 GATGCCCATCAGAAAGGGGTTAATTGTGTAGATTATTTCACTGGTGGTGATAAGCCCTAT 722
Query 813 TTAATTACCGGCTCTGATGATCACACTGCTAAGGTCTGGGACTACCAAACAAAAAGTTGT 872
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 TTAATTACTGGCTCTGATGATCACACTGCTAAGGTCTGGGACTACCAAACAAAAAGTTGT 782
Query 873 GTACAGACCCTGGAGGGGCACACACACAATGTATCTGCAGTATGTTTCCATCCAGAGCTT 932
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 GTCCAGACCCTGGAAGGGCACACACACAATGTATCTGCAGTATGTTTCCATCCAGAGCTT 842
Query 933 CCAATTATAATCACAGGTTCTGAAGATGGCACCGTTCGCATTTGGCATGCAACCACATAC 992
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 843 CCGATTATAATCACAGGTTCTGAAGATGGCACCGTTCGCATTTGGCATGCAACTACATAC 902
Query 993 AGGCTAGAGAACACATTGAATTATGGCCTTGAGAGAGTCTGGGCAATTGGTTACATTAAA 1052
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 903 AGGCTAGAGAACACATTGAATTATGGCCTCGAGAGAGTCTGGGCAATTGGTTACATTAAA 962
Query 1053 AGTTCACGCCGGGTTGTGATCGGATATGATGAAGGAACCATCATGGTTAAACTTGGACGA 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGTTCACGCCGGGTTGTGATCGGATATGATGAAGGAACCATCATGGTTAAACTTGGACGA 1022
Query 1113 GAAATTCCTGTCGCTAGCATGGACAATACCGGAAAAATCATATGGGCTAAGCATAATGAA 1172
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1023 GAAATTCCTGTCGCTAGCATGGACAATACCGGGAAAATCATCTGGGCTAAGCATAATGAA 1082
Query 1173 ATTCAAACTGCAAACATCAAAAGTATTGGTGCAGATTACGAGGTTACTGATGGAGAAAGG 1232
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1083 ATTCAAACTGCAAACATCAAAAGTATTGGTGCAGATTACGAGGTTACTGATGGAGAGAGG 1142
Query 1233 TTGCCCTTGAGTGTTAAAGAGTTGGGGACCTGTGATCTTTATCCACAAAGCTTGAAGCAC 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143 TTGCCCTTGAGTGTTAAAGAGTTGGGGACCTGTGATCTTTATCCACAAAGCTTGAAGCAC 1202
Query 1293 AACCCTAATGGGAGGTTTGTCGTAGTCTGTGGTGACGGAGAATATATAATCTACACGGCT 1352
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1203 AACCCTAATGGGAGGTTTGTCGTAGTCTGTGGTGACGGGGAATATATAATCTACACGGCT 1262
Query 1353 TTGGCTTGGAGAAATAGGTCATTTGGTTCTGGACTGGAATTTGTTTGGTCATCCGAGGGG 1412
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1263 TTGGCTTGGAGAAATAGGTCATTTGGTTCTGGACTGGAATTTGTTTGGTCGTCCGAGGGA 1322
Query 1413 GAGTGTGCGGTTAGAGAAAGCTCATCAAAGATTAAAATATTTAGCAAAAATTTCCAGGAA 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1323 GAGTGTGCGGTTAGAGAAAGCTCATCAAAGATTAAAATATTTAGCAAAAATTTCCAGGAA 1382
Query 1473 AAGAGGAGTATCCGCCCTACTTTTTCAGCTGAGAAGATCTTTGGAGGAACCTTGTTAGCT 1532
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1383 AAGAGGAGTATCCGCCCTACGTTTTCAGCTGAGAAGATCTTTGGAGGAACCTTGTTAGCT 1442
Query 1533 ATGTGTTCAAGTGATTTCATCTGCTTTTATGATTGGGCTGAATGTAGGCTGATTCAACGT 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 ATGTGTTCAAGTGATTTCATCTGCTTTTATGATTGGGCTGAATGTAGGCTGATTCAACGT 1502
Query 1593 ATTGACGTCACTGTAAAGAATCTATATTGGGCTGACAGTGGTGATTTAGTAGCCATTGCT 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1503 ATTGACGTCACTGTAAAGAATCTATATTGGGCTGACAGTGGTGATTTAGTAGCCATTGCT 1562
Query 1653 AGTGACACATCATTCTACATCTTGAAATTCAACCGCGACTTAGTTACCTCACATTTTGAT 1712
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 1563 AGTGACACATCATTCTACATCTTGAAATACAACCGCGACTTAGTTTCCTCACATTTTGAT 1622
Query 1713 AGCGGAAGACCTACTGAGGAAGAAGGTGTTGAGGATGCTTTTGAGGTTCTCCATGAAAAT 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 AGCGGAAGACCTACTGAGGAAGAAGGTGTTGAGGATGCTTTTGAGGTTCTCCATGAAAAT 1682
Query 1773 GATGAACGTGTTAGGACAGGTATATGGGTTGGTGACTGTTTCATTTACAACAACTCTTCC 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1683 GATGAACGTGTTAGGACAGGTATATGGGTTGGTGACTGTTTCATTTACAACAACTCTTCC 1742
Query 1833 TGGAAGCTTAACTACTGTGTTGGAGGCGAGGTAACCACAATGTATCATTTGGACCGCCCA 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1743 TGGAAGCTTAACTACTGTGTTGGAGGCGAGGTAACCACAATGTATCATTTGGACCGCCCA 1802
Query 1893 ATGTATTTGTTGGGATATCTTGCAAGTCAAAGTCGGGTTTTCTTGGTAGACAAAGAATTC 1952
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1803 ATGTATTTGTTGGGCTATCTTGCAAGTCAAAGTCGGGTGTTCTTGGTAGACAAAGAATTC 1862
Query 1953 AATGTTATAGGGTACACCTTGTTGCTAAGCCTGATTGAGTACAAGACTCTTGTGATGCGG 2012
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1863 AATGTTATAGGATACACCTTGCTGCTAAGCCTGATTGAGTACAAGACTCTTGTGATGCGG 1922
Query 2013 GGTGATTTAGACAAAGCCAGTGAAATCTTACCTACAATTCCTAAAGATCAGCATAACAGT 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1923 GGTGATTTAGACAAAGCCAGTGAAATCTTACCTACAATTCCTAAAGATCAGCATAACAGT 1982
Query 2073 GTTGCTCATTTCTTGGAGTCACGGGGAATGATTGAAGATGCTCTGGAAATTGCAACAGAT 2132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1983 GTTGCTCATTTCTTGGAGTCACGGGGAATGATTGAAGATGCTCTGGAAATTGCAACAGAT 2042
Query 2133 CCTGACTACAGATTTGAGTTGGCCATACAACTGGGTAGACTTGAAATTGCACAGGAAATC 2192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2043 CCTGACTACAGATTTGAGTTGGCCATACAACTGGGTAGACTTGAAATTGCACAGGAAATC 2102
Query 2193 GCTGTGGAAGTACAGAGCGAATCTAAGTGGAAACAATTAGGAGAGTTAGCTATGTCCTCC 2252
|| |||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||
Sbjct 2103 GCCGTGGAAGTACAGAGTGAATCTAAGTGGAAGCAATTAGGAGAGTTAGCCATGTCTTCT 2162
Query 2253 GGAAAGCTGCAAATGGCTGAGGAATGCATGAAGTATGCGATGGATTTGAGTGGTTTGTTA 2312
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2163 GGAAAGCTGCAAATGGCTGAGGAATGCATGAAGTATGCTATGGATTTGAGTGGTTTGTTA 2222
Query 2313 CTTCTTTATTCTTCTCTGGGAGATGCTGAAGGTGTAACAAAACTTGCAACACTTGCTAAA 2372
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2223 CTGCTTTATTCTTCTCTGGGAGATGCTGAAGGTGTGGCAAAACTTGCAACACTTGCTAAA 2282
Query 2373 GAACAAGGGAAGAACAATGTCGCCTTTCTTTGCCTATTCATGCTGGGTAAACTGGAAGAT 2432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2283 GAACAAGGGAAGAACAATGTCGCCTTTCTTTGCCTATTCATGCTGGGTAAACTGGAAGAT 2342
Query 2433 TGTTTGCAGTTATTGGTGGAGAGTAACCGGATACCAGAAGCTGCTCTGATGGCACGATCA 2492
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2343 TGTTTGCAGTTATTGGTGGAGAGCAACCGGATACCAGAAGCTGCTCTGATGGCACGATCA 2402
Query 2493 TATCTTCCGAGCAAAGTTTCTGAGATAGTAGCTCTTTGGAGGAAAGATCTCAGCAAGGTT 2552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2403 TATCTTCCGAGCAAAGTTTCTGAGATAGTAGCTCTTTGGAGGAAAGATCTCAGCAAGGTT 2462
Query 2553 AATTCAAAAGCAGCAGAATCTTTGGCTGATCCTGAGGAGTACTCAAATCTTTTTGAAGAT 2612
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2463 AATTCAAAAGCAGCAGAATCTTTGGCTGATCCTGAGGAGTACCCAAATCTTTTTGAAGAT 2522
Query 2613 TGGCAAGTTGCTCTTTCTGTGGAAGCTAAAGCTGTAGAGACAAGGGGAGTTTACACAGGT 2672
|||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 2523 TGGCAAGTAGCTCTTTCTGTCGAAGCTAGAGCTGTAGAGACAAGGGGAGTTTACACAGGT 2582
Query 2673 GCA-AAAGATTATCCTAGCCATGCTGATAAATCTTCCATGACCCTCGTGGAAGCCTTCCG 2731
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2583 GCAGAAA-ATTATCCTAGCCATGCTGATAAATCTTCCATGACCCTCGTGGAAGCCTTCAG 2641
Query 2732 AAACTTGCAAGTTGAGGAAGAGGAATCACTTGAAAATGGAGATATGGATCACGAGGAGGT 2791
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2642 AAACTTGCAAGTTGAGGAAGAGGAATCACTTGAAAATGGAGATATCGATCACGAGGAGGT 2701
Query 2792 AGTAGCAGAAGAAAATGGAAATGAACAAAGGAATGAGGATGATGTAGCGGAGCATGTAGA 2851
||||||||||||||||||||||||||||||||||||||| ||||||| || | |
Sbjct 2702 AGTAGCAGAAGAAAATGGAAATGAACAAAGGAATGAGGAGGATGTAG---AG---G--G- 2752
Query 2852 GGAGCATCATgaagagaaagaagcagaagaagaagaGGGAATTGTTGATGGAGACTCTAC 2911
| | | |||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2753 GCA-C--CATGAAGAAAAAGAAGCAGAAGAAGAAGAAGGAATTGTTGATGGAGACTCTAC 2809
Query 2912 GGATGGAGCTGTACTTGTTAATGGAAGTGAGGCTGACGAAGAGTGGGGTACGAATAATGA 2971
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2810 GGATGGAGCTGTACTTGTTAACGGAAGTGAGGCTGACGAAGAGTGGGGTACGAATAATGA 2869
Query 2972 AGGAAACCCATCAGCCTAATAGCAAGTCGGTCAAGGCCAATGTTGAAAAGTCTGAAAATT 3031
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 2870 AGGAAACCCATCAGCCTAATAGCAACTCGGTCAAGGCCAATGTTGAAAAGTCTGAAATTT 2929
Query 3032 TTGTCTCTGTGCTTACACCGCGTCAGTAGAGTT 3064
|||||||||||||||||||||||||||||||||
Sbjct 2930 TTGTCTCTGTGCTTACACCGCGTCAGTAGAGTT 2962
> Ahg479052 jgi|Araly1|479052|fgenesh2_kg.3__1753__AT3G15980.3
Length=3211
Score = 3517 bits (1904), Expect = 0.0
Identities = 2545/2852 (89%), Gaps = 54/2852 (2%)
Strand=Plus/Plus
Query 216 CTCAGACTCGAGATCAAGAGAAAATTAGCGCAAAGGTCTGAGAGAGTTAAATCTGTGGAT 275
||||||||||| |||||||||||||| || ||| | || |||||||| |||||||| |||
Sbjct 139 CTCAGACTCGATATCAAGAGAAAATTTGCTCAACGATCAGAGAGAGTCAAATCTGTTGAT 198
Query 276 CTTCATCCTACAGAACCATGGATTCTTGCAAGTTTGTATTCTGGAACCTTGTGTATTTGG 335
|| |||||||| |||||||||||||| |||||||||||| |||||||| |||||||||||
Sbjct 199 CTGCATCCTACTGAACCATGGATTCTAGCAAGTTTGTATGCTGGAACCGTGTGTATTTGG 258
Query 336 AACTACCAGACGCAGGTGATGGCAAAATCCTTTGAGGTGACTGAATTACCAGTTCGGTCA 395
||||||||||| ||| ||| |||||||||| |||||||| || || |||||| |||||
Sbjct 259 AACTACCAGACACAGACGATTACAAAATCCTTCGAGGTGACCGACTTGCCAGTTAGGTCA 318
Query 396 GCCAAGTTTGTAGCACGAAAGCAATGGGTTGTCGCAGGAGCTGATGATATGTATATCCGT 455
||||||||| | | || |||||||||||||| || ||||| ||||| ||| | ||||||
Sbjct 319 GCCAAGTTTATTCCGCGCAAGCAATGGGTTGTTGCTGGAGCGGATGACATGCACATCCGT 378
Query 456 GTATACAATTACAACACCATGGACAAGGTTAAAGTGTTTGAGGCTCATTCAGACTACATT 515
|||||||||||||| || ||||||||||| | ||| |||||||||||||| || ||||||
Sbjct 379 GTATACAATTACAATACGATGGACAAGGTCAGAGTATTTGAGGCTCATTCGGATTACATT 438
Query 516 AGGTGTGTGGCTGTTCATCCAACCCTTCCATATGTGCTGTCATCTTCTGATGATATGCTC 575
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 439 AGGTGTGTAGCTGTCCATCCGACCCTTCCATATGTGCTGTCATCTTCTGATGATATGCTC 498
Query 576 ATAAAGCTTTGGGACTGGGAAAAGGGTTGGGCTTGCACTCAGATATTCGAGGGACACTCA 635
||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| || ||
Sbjct 499 ATAAAGCTTTGGGACTGGGAAAACGGTTGGGCTTGTACTCAGATATTTGAGGGGCATTCG 558
Query 636 CACTATGTGATGCAAGTCACATTTAATCCAAAAGACACCAACACTTTTGCCAGTGCATCC 695
||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 559 CACTATGTGATGCAAGTGGTATTTAATCCAAAAGATACCAACACTTTTGCCAGTGCATCG 618
Query 696 CTTGATCGTACCATAAAGATTTGGAATCTTGGTTCCCCAGACCCAAATTTTACATTGGAT 755
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 619 CTTGATCGTACCATAAAGATATGGAATCTTGGTTCCCCAGACCCAAATTTTACACTGGAT 678
Query 756 GCCCATCAGAAAGGAGTAAATTGTGTAGATTATTTCACCGGTGGTGATAAGCCCTATTTA 815
|| |||||||||||||| || ||||||||||||||||| || |||||||| ||||| ||
Sbjct 679 GCTCATCAGAAAGGAGTCAACTGTGTAGATTATTTCACAGGGGGTGATAAACCCTACCTA 738
Query 816 ATTACCGGCTCTGATGATCACACTGCTAAGGTCTGGGACTACCAAACAAAAAGTTGTGTA 875
|||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||
Sbjct 739 ATTACCGGCTCTGATGATCATACTGCTAAGGTATGGGACTATCAAACCAAAAGTTGTGTC 798
Query 876 CAGACCCTGGAGGGGCACACACACAATGTATCTGCAGTATGTTTCCATCCAGAGCTTCCA 935
||||| || || ||||||||||||||||| ||||| ||||||||||| ||||| ||||||
Sbjct 799 CAGACGCTAGATGGGCACACACACAATGTTTCTGCCGTATGTTTCCACCCAGAACTTCCA 858
Query 936 ATTATAATCACAGGTTCTGAAGATGGCACCGTTCGCATTTGGCATGCAACCACATACAGG 995
|| ||||||||||||||||| |||||||| |||||||||||||| || || || ||||||
Sbjct 859 ATAATAATCACAGGTTCTGAGGATGGCACTGTTCGCATTTGGCACGCCACGACTTACAGG 918
Query 996 CTAGAGAACACATTGAATTATGGCCTTGAGAGAGTCTGGGCAATTGGTTACATTAAAAGT 1055
||||| ||||||||||||||||| || |||||||| ||||| ||||||||||| ||||||
Sbjct 919 CTAGAAAACACATTGAATTATGGTCTCGAGAGAGTTTGGGCCATTGGTTACATCAAAAGT 978
Query 1056 TCACGCCGGGTTGTGATCGGATATGATGAAGGAACCATCATGGTTAAACTTGGACGAGAA 1115
|| || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 979 TCGCGGCGGGTTGTGATTGGATATGATGAAGGAACCATCATGGTTAAGCTTGGACGAGAA 1038
Query 1116 ATTCCTGTCGCTAGCATGGACAATACCGGAAAAATCATATGGGCTAAGCATAATGAAATT 1175
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1039 ATTCCTGTCGCTAGCATGGACAGTAGCGGAAAAATCATATGGGCTAAGCATAATGAAATT 1098
Query 1176 CAAACTGCAAACATCAAAAGTATTGGTGCAGATTACGAGGTTACTGATGGAGAAAG-GTT 1234
||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||
Sbjct 1099 CAAACTGCAAACATCAAAAGTATTGGTGCGGGTTACGAGGTTACTGATGGAGAAAGACTT 1158
Query 1235 GCCCTTGAGTGTTAAAGAGTTGGGGACCTGTGATCTTTATCCACAAAGCTTGAAGCACAA 1294
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1159 -CCCTTGTCTGTTAAAGAGTTGGGGACCTGTGATCTTTATCCACAAAGCTTGAAGCACAA 1217
Query 1295 CCCTAATGGGAGGTTTGTCGTAGTCTGTGGTGACGGAGAATATATAATCTACACGGCTTT 1354
||||||||||||||||||||||||||| ||||| ||||| || ||||||||||| |||||
Sbjct 1218 CCCTAATGGGAGGTTTGTCGTAGTCTGCGGTGATGGAGAGTACATAATCTACACAGCTTT 1277
Query 1355 GGCTTGGAGAAATAGGTCATTTGGTTCTGGACTGGAATTTGTTTGGTCATCCGAGGGGGA 1414
||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1278 GGCTTGGAGAAATAGATCTTTTGGGTCTGGCCTGGAATTTGTTTGGTCATCCGAGGGGGA 1337
Query 1415 GTGTGCGGTTAGAGAAAGCTCATCAAAGATTAAA-ATATTTAGCAAAAATTTCCAGGAAA 1473
||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||
Sbjct 1338 ATGTGCGGTTAGAGAAAGCTCATCAAAGAT-AAAGATATTCAGTAAAAATTTCCAGGAAA 1396
Query 1474 AGAGGAGTATCCGCCCTACTTTTTCAGCTGAGAAGATCTTTGGAGGAACCTTGTTAGCTA 1533
|| ||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |
Sbjct 1397 GGAAGAGTATCCGGCCTACTTTCTCAGCTGAGAAGATTTTTGGAGGAACCTTGTTAGCAA 1456
Query 1534 TGTGTTC-AAGTGATTTCATCTGCTTTTATGATTGGGCTGAATGTAGGCTGATTCAACGT 1592
||||||| || ||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1457 TGTGTTCGAA-TGATTTCATCTGCTTCTATGATTGGGCTGAATGCAGGCTGATTCAACAA 1515
Query 1593 ATTGACGTCACTGTAAAGAATCTATATTGGGCTGACAGTGGTGATTTAGTAGCCATTGCT 1652
||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1516 ATTGATGTCACCGTAAAGAATCTTTATTGGGCTGAAAGTGGTGATTTAGTAGCCATTGCT 1575
Query 1653 AGTGACACATCATTCTACATCTTGAAATTCAACCGCGACTTAGTTACCTCACATTTTGAT 1712
||||| | ||||||||||||||||| | ||| |||||||| ||| ||||||||||||||
Sbjct 1576 AGTGATTCGTCATTCTACATCTTGAAGTACAATCGCGACTTGGTTTCCTCACATTTTGAT 1635
Query 1713 AGCGGAAGACCTACTGAGGAAGAAGGTGTTGAGGATGCTTTTGAGGTTCTCCATGAAAAT 1772
|| |||||||| ||||| ||||| ||||||||||||||||||||||||||||| || |||
Sbjct 1636 AGTGGAAGACCAACTGATGAAGAGGGTGTTGAGGATGCTTTTGAGGTTCTCCACGAGAAT 1695
Query 1773 GATGAACGTGTTAGGACAGGTATATGGGTTGGTGACTGTTTCATTTACAACAACTCTTCC 1832
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1696 GATGAACGTGTTAGGACAGGTATATGGGTTGGGGACTGCTTCATTTACAACAACTCTTCT 1755
Query 1833 TGGAAGCTTAACTACTGTGTTGGAGGCGAGGTAACCACAATGTATCATTTGGACCGCCCA 1892
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1756 TGGAAGCTTAACTATTGTGTTGGAGGCGAGGTAACCACAATGTATCATTTAGACCGCCCA 1815
Query 1893 ATGTATTTGTTGGGATATCTTGC-AAGTCAAAGTCGGGTTTTCTTGGTAGACAAAGAATT 1951
||||||||||| || ||| |||| || ||||| ||||| ||||||||||||||||||||
Sbjct 1816 ATGTATTTGTTAGGCTATATTGCCAAC-CAAAGCCGGGTGTTCTTGGTAGACAAAGAATT 1874
Query 1952 CAATGTTATAGGGTACACCTTGTTGCTAAGCCTGATTGAGTACAAGACTCTTGTGATGCG 2011
|||||| ||||| || ||| || |||| ||||||||||| ||||||||||||||||||||
Sbjct 1875 CAATGTCATAGGATATACCCTGCTGCTTAGCCTGATTGAATACAAGACTCTTGTGATGCG 1934
Query 2012 -GGGTGATTTAGACAAAGCCAGTGAAATCTTACCTACAATTCCTAAAGATCAGCATAACA 2070
||| ||||| || | ||||| | |||| |||||||||||||||||||| ||||||||||
Sbjct 1935 AGGG-GATTTGGATAGAGCCAATCAAATTTTACCTACAATTCCTAAAGAGCAGCATAACA 1993
Query 2071 GTGTTGCTCATTTCTTGGAGTCACGGGGAATGATTGAAGATGCTCTGGAAATTGCAACAG 2130
|||||||||||||||||| || ||||||||||||||||||||| | ||||||| ||||
Sbjct 1994 ATGTTGCTCATTTCTTGGAATCTCGGGGAATGATTGAAGATGCTTTAGAAATTGTGACAG 2053
Query 2131 ATCCT-GACTACAGATTTGAGT-TGGCCATACAACTGGGTAGACTTGAAATTGCACAGGA 2188
||| | ||||||| |||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct 2054 ATC-TAGACTACAAATTTGA-TCTGGCCATACAACTGGGTAGACTTGAAATTGCAAAGGA 2111
Query 2189 AATCGCTGTGGAAGTACAGAGCGAATCTAAGTGGAAACAATTAGGAGAGTTAGCTATGTC 2248
||| |||| |||||||||||||| ||||| ||||| || |||||||||||||| |||||
Sbjct 2112 AATTGCTGAAGAAGTACAGAGCGAGTCTAAATGGAAGCAGTTAGGAGAGTTAGCCATGTC 2171
Query 2249 CTCCGGAAAGCTGCAAATGGCTGAGGAATGCATGAAGTATGCGATGGATTTGAGTGGTTT 2308
||| || ||||||||| |||| ||||| ||||||||||| || |||||||||||||||||
Sbjct 2172 CTCTGGGAAGCTGCAATTGGCCGAGGATTGCATGAAGTACGCTATGGATTTGAGTGGTTT 2231
Query 2309 GTTACTTCTTTATTCTTCTCTGGGAGATGCTGAAGGTGTAACAAAACTTGCAA-CACTTG 2367
|||||| || ||||||||| | |||||||||||||| || ||||||||||| | ||||
Sbjct 2232 GTTACTACTATATTCTTCTTTAGGAGATGCTGAAGGGGTGTCAAAACTTGCATGC-CTTG 2290
Query 2368 CTAAAGAACAAGGGAAGAACAATGTCGCCTTTCTTTGCCTATTCATGCTGGGTAAACTGG 2427
|||| ||||| |||||||||||||| |||||||||||| |||| | |||||||| | |||
Sbjct 2291 CTAAGGAACAGGGGAAGAACAATGTTGCCTTTCTTTGCTTATTTACGCTGGGTAGATTGG 2350
Query 2428 AAGATTGTTTGCAGTTATTGGTGGAGAGTAACCGGATACCAGAAGCTGCTCTGATGGCAC 2487
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2351 AAGATTGTCTGCAGTTATTGGTGGAGAGTAACCGGATACCTGAAGCTGCTCTGATGGCAC 2410
Query 2488 GATCATATCTTCCGAGCAAAGTTTCTGAGATAGTAGCTCTTTGGAGGAAAGATCTCAGCA 2547
| || |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 2411 GTTCTTATCTTCCGAGCAAAGTTTCGGAGATAGTAGCTCTTTGGAGGGAAGATCTCAGCA 2470
Query 2548 AGGTTAATTCAAAAGCAGCAGAATCTTTGGCTGATCCTGAGGAGTACTCAAATCTTTTTG 2607
|||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||
Sbjct 2471 AGGTTAATTCAAAAGCAGCAGAATCTTTAGCTGATCCTGAAGAGTACCCAAATCTTTTTG 2530
Query 2608 AAGATTGGCAAGTTGCTCTTTCTGTGGAAGCTAA-AGCTGTAGAGACAAGGGGAGTTTAC 2666
| ||||||||||||||||||||||| ||||| || | ||| ||||||||||||||||||
Sbjct 2531 AGGATTGGCAAGTTGCTCTTTCTGTTGAAGCGAACA-CTGCAGAGACAAGGGGAGTTTAT 2589
Query 2667 ACAGGTGCA-AAAGATTATCCTAGCC-ATGCTGATAAATCTTCCATGACCCTCGTGGAAG 2724
|| | |||| ||| ||||||| | || |||| |||||||||||||| |||||||||||||
Sbjct 2590 ACTGCTGCAGAAA-ATTATCC-ATCCCATGCCGATAAATCTTCCATTACCCTCGTGGAAG 2647
Query 2725 CCTTCCGAAACTTGCAAGTTGAGGAAGAGGAATCACTTGAAAATGGAGAT-ATGGATCAC 2783
|||| ||||| |||||||||| | ||||||||||||||||||||||| | || ||||||
Sbjct 2648 CCTTTAGAAACCTGCAAGTTGAAGCAGAGGAATCACTTGAAAATGGAG-TCATCGATCAC 2706
Query 2784 GAGGAGGTAGTAGCAGAAGAAAATGGAAATGAACAAAGGAATGAGGATGATGTAGCGGAG 2843
|||| ||| |||||||||| || | || | | ||||| || || | ||
Sbjct 2707 GAGG---TAG---CAGAAGAAAACGG---T---CAT-GTA--GAGGACGA---AG-G-AG 2746
Query 2844 CATGTAGAGGAGCATCATgaagagaaagaagcagaa-gaagaagaGGGAATTGTTGATGG 2902
||| |||||| || || ||||| | |||| ||| |||||||||||| |||| ||||
Sbjct 2747 -ATGAAGAGGAACAACAGGAAGA-A--GAAGT-GAATGAAGAAGAGGGAGTTGTGGATGC 2801
Query 2903 AGACTCTACGGATGGAGCTGTACTTGTTAATGGAAGTGAGGCTGACGAAGAGTGGGGTAC 2962
|||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 2802 AGACTCTACGGACGGTGCTGTACTTGTTAATGGAAGTGAGGGTGAGGAAGAGTGGGGTAC 2861
Query 2963 GAATAATGAAGGAAACCCATCAGCCTAATA-GCAAGTCGGTCAAGGC-CAATGTTGAAAA 3020
|||||| |||||||||||||||||||||| ||||||| ||| ||| ||||||||||||
Sbjct 2862 GAATAACAAAGGAAACCCATCAGCCTAATAAGCAAGTCAGTCCAGGATCAATGTTGAAAA 2921
Query 3021 GTCTGAAAATTTTGTCTCTGTGCTTACACCGC 3052
||| |||| |||||||||||||||||| ||||
Sbjct 2922 GTC-GAAA-TTTTGTCTCTGTGCTTACGCCGC 2951
> Ahg927512 jgi|Araly1|927512|scaffold_203073.1
Length=2774
Score = 1901 bits (1029), Expect = 0.0
Identities = 1985/2446 (81%), Gaps = 67/2446 (3%)
Strand=Plus/Plus
Query 246 CAAAGGTCTGAGAGAGTTAAATCTGTGGATCTTCATCCTACAGAACCATGGATTCTTGCA 305
||||| || || ||||| |||||||| ||||| ||||| ||||| |||||||| || |||
Sbjct 36 CAAAGATCCGAAAGAGTCAAATCTGTAGATCTCCATCCCACAGAGCCATGGATCCTGGCA 95
Query 306 AGTTTGTATTCTGGAACCT-TGTGTATTTGGAACTACCAGACGCAGGTGATGGCAAAATC 364
||||||||||| |||| || |||| || ||||| |||||||| ||| |||| |||||
Sbjct 96 AGTTTGTATTCCGGAA-CTGTGTGCATCTGGAATTACCAGACACAGACAATGGTAAAAT- 153
Query 365 CTTT-GAGGTGACTGAATTACCAGTTCGGTCAGCCAAGTTTGTAGCACGAAAGCAATGGG 423
|||| || ||||||||||| || ||||||||||| ||||| | ||||| ||||| ||||
Sbjct 154 CTTTCGACGTGACTGAATTGCCTGTTCGGTCAGCAAAGTTCATTGCACGGAAGCAGTGGG 213
Query 424 TTGTCGCAGGAGCTGATGATATGTATATCCGTGTATACAATTACAACACCATGGACAAGG 483
|||| || ||||||||||| |||| ||| ||||| ||||| |||||||| ||||| |||
Sbjct 214 TTGTAGCTGGAGCTGATGACATGTTTATTCGTGTCTACAACTACAACACAATGGATAAGA 273
Query 484 TTAAAGTGTTTGAGGCTCATTCAGACTACATTAGGTGTGTGGCTGTTCATCCAACCCTTC 543
| ||||| |||||||||||| | || |||||| | ||||| ||||||||||| ||||||
Sbjct 274 TCAAAGTATTTGAGGCTCATGCTGATTACATTCGTTGTGTTGCTGTTCATCCCTCCCTTC 333
Query 544 CATATGTGCTGTCATCTTCTGATGATATGCTCATAAAGCTTTGGGACTGGGAAAAGGGTT 603
| |||||| | ||||| ||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct 334 CCTATGTGTTATCATCATCTGATGATATGCTCATCAAGCTCTGGGACTGGGATAAGGGTT 393
Query 604 GGGCT-TGCACTCAGATATTCG-AGGGACACTCACACTATGTGATGCAAGTCACATTT-A 660
|||| ||||||||||| |||| |||| || || || ||||| |||||||| || ||| |
Sbjct 394 -GGCTCTGCACTCAGATTTTCGAAGGG-CATTCCCATTATGTTATGCAAGTGAC-TTTCA 450
Query 661 ATCCAAAAGACACCAACACTTTTGCCAGTGCATCCCTTGATCGTACCAT-AAAGATTTGG 719
| ||||||||| |||| |||||||| |||||||||||||| |||||||| ||| || |||
Sbjct 451 ACCCAAAAGACTCCAATACTTTTGCTAGTGCATCCCTTGACCGTACCATCAAA-ATATGG 509
Query 720 AATCTTGGTTCCCCAGACCCAAATTTTACATTGGATGCCCATCAGAAAGGAGTAAATTGT 779
|||||||| || || || ||||||||||| |||||||| |||| |||||| ||||| |||
Sbjct 510 AATCTTGGCTCTCCGGATCCAAATTTTACTTTGGATGCACATCTGAAAGGGGTAAACTGT 569
Query 780 GTAGATTA-TTTCACCGGTGGTGATAAGCCCTATTTAATTACCGGCTCTGATGATCACAC 838
||||| || ||| || ||||| ||||| || || |||| || || ||||||||||| ||
Sbjct 570 GTAGACTACTTT-ACTGGTGGGGATAAACCATACCTAATCACTGGTTCTGATGATCATAC 628
Query 839 TGCTAAGGTCTGGGACTACCAAACAAAAAGTTGTGTACAGACCCTGGAGGGGCACACACA 898
||||||||| ||||| |||||||| || ||||| || ||||| || || || || |||||
Sbjct 629 TGCTAAGGTGTGGGATTACCAAACGAAGAGTTGCGTTCAGACACTTGAAGGTCATACACA 688
Query 899 CAATGTATCTGCAGTATGTTTCCATCCAGAGCTTCCAATTATAATCACAGGTTCTGAAGA 958
|||||| |||||||||| ||| ||||||||||| ||||| || || ||||| || || ||
Sbjct 689 CAATGTTTCTGCAGTATCTTTTCATCCAGAGCTCCCAATAATTATTACAGGATCCGAGGA 748
Query 959 TGGCACCGTTCGCATTTGGCATGCAACCACATACAGGCTAGAGAACACATTGAATTATGG 1018
||| || ||||| || |||||||| ||||| |||||||| ||||| |||||||| |||||
Sbjct 749 TGGAACTGTTCGTATATGGCATGCCACCACTTACAGGCTTGAGAATACATTGAACTATGG 808
Query 1019 CCTTGAGAGAGTCTGGGCAATTGGTTACATTAAAAGTTCACGCCGGGTTGTGATCGGATA 1078
||||||||| || ||||| ||||| |||||||| |||||||||||||||| || || ||
Sbjct 809 CCTTGAGAGGGTTTGGGCTATTGGACACATTAAAGGTTCACGCCGGGTTGTAATTGGTTA 868
Query 1079 TGATGAAGGAACCATCATGGTTAAACTTGGACGAGAAATTCCTGTCGCTAGCATGGACAA 1138
||| |||||| |||| ||||| |||||||| || ||||| || || ||||| ||||| ||
Sbjct 869 TGACGAAGGATCCATAATGGTGAAACTTGGCCGTGAAATACCAGTGGCTAGTATGGATAA 928
Query 1139 TACCGGAAAAATCATATGGGCTAAGCATAATGAAATTCAAACTGCAAACATCAAAAGTAT 1198
| ||||||||| || |||||||| || ||||| || || |||| ||||||||| ||| |
Sbjct 929 CAGCGGAAAAATTATTTGGGCTAAACACAATGAGATACATACTGTAAACATCAAGAGTGT 988
Query 1199 TGGTGCAGATTACGAGGTTACTGATGGAGAAAGGTTGCCCTTGAG-TGTTAAAGAGTTGG 1257
|| ||||| | ||||| |||||||| || || |||| ||| | |||||||||| | |
Sbjct 989 GGGCGCAGA-T--GAGGTCACTGATGGTGAGAGACTGCCTTTG-GCTGTTAAAGAGCTAG 1044
Query 1258 GGACCTGTGATCTTTATCCACAAAGCTTGAAGCACAACCCTAATGGGAGGTTTGTCGTAG 1317
||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| || |
Sbjct 1045 GGACCTGCGATCTTTATCCTCAAAGCTTGAAGCACAACCCTAATGGTAGGTTTGTAGTTG 1104
Query 1318 TCTGTGGTGACGGAGAATATATAATCTACACGGCTTTGGCTTGGAGAAATAGGTCATTTG 1377
| ||||| || || || || || |||||||| || ||||| ||| |||||||||||||||
Sbjct 1105 TTTGTGGAGATGGTGAGTACATCATCTACACTGCCTTGGCGTGGCGAAATAGGTCATTTG 1164
Query 1378 GTTCTGGACTGGAATTTGTTTGGTCATCCGAGGGGGAGTGTGCGGTTAGAGAAAGCTC-A 1436
| ||||| |||||||||||||||||||| || |||||| ||| || || |||||||| |
Sbjct 1165 GCTCTGGGCTGGAATTTGTTTGGTCATCTGATGGGGAGCATGCTGTCAGGGAAAGCTCGA 1224
Query 1437 TCAAAGATTAAAATATTT-AGCAAAAATTTCCAGGAAAAGAGGAGTATCCG-CCCTACTT 1494
||||||| || || ||| ||||| |||||||||||||||| || | | | ||| ||||
Sbjct 1225 -CAAAGATCAAGAT-TTTCAGCAAGAATTTCCAGGAAAAGAAGACTGTGAGACCC-ACTT 1281
Query 1495 TTTCAGCTGAGAAGATCTTTGGAGGAACCTTGTTAGCTATGTGTTCAAGTGATTTCATCT 1554
| ||||| ||| | || ||||| || || || || || ||||| ||||||||||| ||||
Sbjct 1282 TCTCAGCAGAGCACATTTTTGGTGGGACGTTATTGGCAATGTGCTCAAGTGATTTTATCT 1341
Query 1555 GCTTTTATGATTGGGCTGAATGTAGGCTGATTCA-ACGTATTGACGTCACTG-TAAAGAA 1612
|||| ||||||||||| ||||||||| ||||| | || || || || |||| |||| ||
Sbjct 1342 GCTTCTATGATTGGGCGGAATGTAGGTTGATT-AGGCGAATAGATGTTACTGTTAAA-AA 1399
Query 1613 TCTATATTGGGCTGACAGTGGTGATTTAGTAGCCATTGCTAGTGACACATCATTCTACAT 1672
||| |||||||| |||||||||||| |||| || ||||| ||||| |||||||||||||
Sbjct 1400 TCTTTATTGGGCGGACAGTGGTGATCTAGTTGCAATTGCCAGTGATTCATCATTCTACAT 1459
Query 1673 -CTTGAAATTCAACCGCGA-CTTAGTTACCTCACATTTTGATAGCGG-AAGACCTACTGA 1729
||| || || || ||||| || ||| |||| |||||||| |||| || || | |||
Sbjct 1460 CCTT-AAGTTTAATCGCGAGATT-GTTTCCTCTTATTTTGATGGCGGTAA-ACAAATTGA 1516
Query 1730 GGAAGAAGGTGTTGAGGATGCTTTTGAGGTTCTCCATGAAAATGATGAACGTGTTAGGAC 1789
|| ||||| |||| || || |||||| ||||| |||||| ||||||||||| ||||
Sbjct 1517 TGAGGAAGGCATTGAAGACGCATTTGAGCTTCTCAATGAAACCAATGAACGTGTTCGGAC 1576
Query 1790 AGG-TATATGGGTTGGTGACTGTTTCATTTACAACAACTCTTCCTGGAAGCTTAACTACT 1848
||| | |||||||||| || ||||| || || | ||||||||| |||| |||||||||||
Sbjct 1577 AGGCT-TATGGGTTGGGGATTGTTTTATCTATACCAACTCTTCTTGGAGGCTTAACTACT 1635
Query 1849 GTGTTGGAGGCGAGGTAACCACAATGTATCATTTGGACCGCCCAATGTATTTGTTGGGAT 1908
||||||| || |||||||| |||||||||||| ||||||| || ||||| |||||||| |
Sbjct 1636 GTGTTGGTGGTGAGGTAACGACAATGTATCATCTGGACCGTCCTATGTACTTGTTGGGTT 1695
Query 1909 ATCTTGC-AAGTCAAAGTCGGGTTT-TCTTGGTAGACAAAGAATTCAATGTTATAGGGTA 1966
||||||| || |||||| ||||||| | ||| | |||||||| ||||||||||| || ||
Sbjct 1696 ATCTTGCTAA-TCAAAGCCGGGTTTAT-TTGATTGACAAAGAGTTCAATGTTATTGGATA 1753
Query 1967 CACCTT-GTTGCTAAGCCTGATTGAGTACAAGACTCTTGTGATGCGGGGTGATTTAGACA 2025
||| || || |||| |||||||||||||||||||||||||||| || ||||| || |
Sbjct 1754 CACTTTACTT-TTAAGTTTGATTGAGTACAAGACTCTTGTGATGCGTGGAGATTTGGA-A 1811
Query 2026 AAGCC-AGTGAAATCTTACCTACAATTCCTAAAGATCAGCATAACAGTGTTGCTCA-TTT 2083
|| | | ||||||||||||| |||||||||| || || ||||| || || || || |||
Sbjct 1812 CAGGCTAATGAAATCTTACCTTCAATTCCTAAGGAGCATCATAATAGCGTGGCACACTTT 1871
Query 2084 CTTGGAGTCACGGGGAATGATTGAAGATGCTCTGGAAATTGCAACAGATCCTGACTACAG 2143
||||| ||||| || |||| ||||||||||| | | || || || ||||| |||||
Sbjct 1872 -TTGGAATCACGTGGTATGACAGAAGATGCTCTACAGGTAGCTACTGACCCTGATTACAG 1930
Query 2144 ATTTGAGTTGGCCATACAACTGGGTAGACTTGAAATT-GCACAGGAAATCGCTGTGGAAG 2202
||||||||||||| |||| || |||||| ||| | ||| |||| || ||||| || |
Sbjct 1931 ATTTGAGTTGGCCGTACAGCTCGGTAGA-TTGGCGGTCGCAAAGGACATTGCTGTAGAGG 1989
Query 2203 TACAGAGCGAATCTAAGTGGAAACAA-TTAGGAGAGTTAGCTATGTCCTCCGGAAAGCTG 2261
||| | || ||||| ||||| ||| || ||||| |||||||||||| | || ||||||
Sbjct 1990 CACAAAATGAGTCTAAATGGAAGCAACTT-GGAGAATTAGCTATGTCCACTGGGAAGCTG 2048
Query 2262 CAAATGGCTGAGGAATGCATGAAGTATGCGATGGATTTGAGTGGTTTGTTACTTCTTTAT 2321
| ||||||||||||||||||| | |||| |||||||||||||| |||| || ||||||
Sbjct 2049 GATATGGCTGAGGAATGCATGAGGCATGCTATGGATTTGAGTGGACTGTTGCTGCTTTAT 2108
Query 2322 TCTTC-TCTGGGAGATGCTGAAGG-TGTAACAAAACT-TGCAACACTTGCTAAAGAACAA 2378
||||| | |||||||||| || || | | | || || | || ||||||| ||||| |||
Sbjct 2109 TCTTCAT-TGGGAGATGCAGAGGGAT-TGATGAAGCTGT-CAGCACTTGCCAAAGAGCAA 2165
Query 2379 GGGAAGAACAATGTCGCCTTTCTTTGCCTATTCATGCTGGGTAAACTGGAAGATTGTTTG 2438
|| ||||| |||||||| ||||||||| | |||||| ||||| || | ||||| || ||
Sbjct 2166 GGAAAGAATAATGTCGCTTTTCTTTGCTTGTTCATGTTGGGTCAAGTAGAAGACTGCCTG 2225
Query 2439 CAGT-TATTGGTGGAGAGTAACCGGATACCAGAAGCTGCTCTGATGGCACGATCATATCT 2497
|| | | |||||||| ||||| || ||||| ||||| ||||||||||||||||| || ||
Sbjct 2226 CA-TCTGTTGGTGGAAAGTAATCGAATACCTGAAGCCGCTCTGATGGCACGATCGTACCT 2284
Query 2498 TCCGAGCAAAGTTTCTGAGATAGTAGCTCTT-TGGAGGAAA-GATCTCAGCAAGGTTAAT 2555
||| ||||| || || || ||||| || || ||||| ||| ||| | | |||| | ||
Sbjct 2285 TCCAAGCAAGGTCTCCGAAATAGTGGCA-TTGTGGAG-AAATGATTTGACCAAGAT-AAG 2341
Query 2556 TCAAAAG-CAGCAGAATCTTTGGCTGATCCTGAGGAGTA-CTCAAATCTTTTTGAAGATT 2613
|| |||| | || |||||| |||||||||| || ||||| | ||| ||| ||||| || |
Sbjct 2342 TCCAAAGGCTGCTGAATCTCTGGCTGATCCCGAAGAGTATCCCAA-TCTCTTTGAGGAGT 2400
Query 2614 GGCAAGTTGCTCTTTCTGTGGAAGCTAAAGCTGTAGAGACAAGGGG 2659
||||||| | || || | ||| || ||||| ||||||||||||
Sbjct 2401 GGCAAGTCACCCTGTCCCTTGAAAATAGAGCTGCAGAGACAAGGGG 2446
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117051322885
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5