BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G54560.1
Length=4590
Score E
Sequences producing significant alignments: (Bits) Value
Ahg910579 jgi|Araly1|910579|Al_scaffold_0001_833 3144 0.0
Ahg893981 jgi|Araly1|893981|Al_scaffold_0006_1977 983 0.0
Ahg359426 jgi|Araly1|359426|fgenesh1_pg.C_scaffold_221000001 828 0.0
Ahg920678 jgi|Araly1|920678|scaffold_101959.1 754 0.0
> Ahg910579 jgi|Araly1|910579|Al_scaffold_0001_833
Length=7728
Score = 3144 bits (1702), Expect = 0.0
Identities = 2530/2926 (86%), Gaps = 72/2926 (2%)
Strand=Plus/Plus
Query 1502 AGAAGCCTGGTGGAATTGTGGCTCTCCTTGATGAAGCTTGCATGTTTCCGAAGTCGACCC 1561
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 4598 AGAAGCCTGGTGGAATTGTGGCACTCCTTGATGAAGCTTGCATGTTTCCGAAGTCGACCC 4657
Query 1562 ATGAAACATTTGCGAACAAGCTTTATCAAACTTTTAAGACACACAAGAGGTTCATCAAGC 1621
||||||||||||| |||||||||||||| ||||| ||||| |||||| |||||||||| |
Sbjct 4658 ATGAAACATTTGCAAACAAGCTTTATCAGACTTTCAAGACCCACAAGCGGTTCATCAAAC 4717
Query 1622 CAAAACTCTCTCGAACAGATTTTGCTGTTGCCCATTATGCTGGAGAAGTCCAGTATCAGT 1681
|||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||
Sbjct 4718 CAAAACTCTCTCGAACAGATTTCGCTGTTGCCCATTATGCTGGAGAAGTTCTGTATCAGT 4777
Query 1682 CTGATCTATTTCTAGACAAAAACAAGGATTATGTTATCCCTGAACATCAAGATTTGTTGG 1741
|||| |||||||| || ||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 4778 CTGAACTATTTCTGGATAAAAACAAGGATTATGTGATCCCTGAACACCAAGATTTGTTGG 4837
Query 1742 GTGCTTCCAAGTGTCCTTTTGTTGTGGGTCTCTTTCC-TCCGCTCCCGGAAGAAACATCT 1800
| |||||||| ||||| |||||||||||||| ||||| ||| || |||||||||||||||
Sbjct 4838 GGGCTTCCAAATGTCCCTTTGTTGTGGGTCT-TTTCCCTCCACTTCCGGAAGAAACATCT 4896
Query 1801 AAATCTTCAAAGTTTTCTTCCATTGGCTCTCGCTTTAAGTTGCAACTCCAGCAACTGATG 1860
||||| ||||||||||| |||||||| ||||||| |||| ||||||||||||||||||||
Sbjct 4897 AAATCGTCAAAGTTTTCATCCATTGGTTCTCGCTCTAAGATGCAACTCCAGCAACTGATG 4956
Query 1861 GAAACATTAAACTCTACCGAGCCTCACTACATCAGATGTGTGAAGCCCAATAACCTTTTG 1920
||||||||||| || ||||||||||| |||||||||||||||||||| || || ||| |
Sbjct 4957 GAAACATTAAATTCCACCGAGCCTCATTACATCAGATGTGTGAAGCCTAACAATCTTCTA 5016
Query 1921 AAGCCTGCCGTATTTGAGAATGTAAACATTATGCAGCAACTTCGGTGTGGTGGTGTTTTG 1980
||||||||| ||||||||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct 5017 AAGCCTGCCATATTTGAGAATGTGAACATCATGCAGCAACTGCGATGTGGTGGTGTTTTA 5076
Query 1981 GAAGCGATCAGAATCAGTTGTGCGGGGTATCCCACTCGTAAACCTTTCTTTGAGTTCATT 2040
|| ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 5077 GAGGCGATCAGAATTAGTTGCGCAGGGTATCCAACTCGTAAACCTTTCTTTGAGTTCATA 5136
Query 2041 AACCGTTTTGGACTTCTATATCCT-CGAGCTCTAGAAGGGAACTACGAGGAGAAGG-CTG 2098
||||||||||||||||||| |||| | ||| |||||| ||||| ||| ||||| | | |
Sbjct 5137 AACCGTTTTGGACTTCTATCTCCTGCT-GCTTTAGAAGTGAACTTCGATGAGAAAGTC-G 5194
Query 2099 CA-GCGCAAAAGATCTTAGACAATATTGGACTCAAAGGATACCAGGTTGGTAAAACAAAG 2157
|| | ||||||||||| ||||| || |||||||||||||||||| |||||||||| |||
Sbjct 5195 CATGT-CAAAAGATCTTGGACAACATGGGACTCAAAGGATACCAGATTGGTAAAACTAAG 5253
Query 2158 GTGTTTTTAAGGGCGGGTCAGATGGCTGAACTCGACGCGAGAAGAACT-ATGGT-TCTCA 2215
|| || ||||||||||| |||||||||||||||||||| ||||| || | ||| | | |
Sbjct 5254 GTATTCTTAAGGGCGGGCCAGATGGCTGAACTCGACGCTAGAAGGGCTGA-GGTGT-TAA 5311
Query 2216 GT-GCTGCTGCCaaaaaaaTTCAGAGACGAATACGGACTCATCAGGCCCA-AAGACGGTT 2273
|| | |||||| |||||||||||| |||| ||||| |||||||| || || || ||||||
Sbjct 5312 GTAG-TGCTGCGAAAAAAATTCAGCGACGGATACGTACTCATCAAGCTCAGAA-ACGGTT 5369
Query 2274 CATT-TTACTAAGAAAAGCCACCATATCTCTCCAAGCCT-TATGCAGAGGAAGACTTTCT 2331
|||| || || |||||||||||||| ||||| ||||| | |||| ||||||||||||||
Sbjct 5370 CATTGTT-CTGAGAAAAGCCACCATTTCTCTTCAAGC-TATATGTAGAGGAAGACTTTCC 5427
Query 2332 TCCAAAATTTTCGATAACTTGAGACGACAAGCTGCTGCTGTGAAGATTCAGAAGAATG-C 2390
| ||| ||| ||| || ||||||||| |||||||||||||||||||||||||||||| |
Sbjct 5428 TGCAAGCTTTACGAAAATTTGAGACGAGAAGCTGCTGCTGTGAAGATTCAGAAGAATGGC 5487
Query 2391 TCGGAGA--TTACATTCTAGAAAATCATACAAAAACCTCCATGTAGCGGCGCTTGTTGTA 2448
|||||| ||| ||||||||||||||| ||||| ||||||||||| | |||||||||
Sbjct 5488 -CGGAGACATTA--TTCTAGAAAATCATATAAAAAGCTCCATGTAGCTTCTCTTGTTGTA 5544
Query 2449 CAAACAGGTTTAAGAGCAATGGCTGCTCATAAACAGTTTAGATTCAGGAAGCAAACAAAG 2508
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 5545 CAAACAGGTTTAAGAGCAATGGCTGCTCATAAACAATTCAGATTCAGGAAGCAAACAAAG 5604
Query 2509 GCTGCTACAACTATTCAGGCTCAGTTCCGTTGTCACAGAGCAA-CTTTGTACTTCAAGAA 2567
||||| |||| | |||||||||||| |||||||||||||||| || |||| ||| ||
Sbjct 5605 GCTGCCACAATTGTTCAGGCTCAGTGGCGTTGTCACAGAGCAATCTCA-TACTACAAAAA 5663
Query 2568 GCTTAAGAAA-GGAGTGATCCTGTCTCAGACACGATGGAGAGGCAAACTTGC-AAGGAGA 2625
|||||| ||| ||||| ||||| |||||||||||||||||||||| |||||| ||| |||
Sbjct 5664 GCTTAA-AAATGGAGTAATCCTATCTCAGACACGATGGAGAGGCAGACTTGCTAAG-AGA 5721
Query 2626 GAACTTCG-ACAGCTCAAAATGGCTTCAAGGGAAACAGGCGCACTGAAAGAGGCAAAGGA 2684
|||||| | | | |||||||||||| ||||||||||||| ||||| ||||||||||||||
Sbjct 5722 GAACTTAGGAAA-CTCAAAATGGCTGCAAGGGAAACAGGAGCACTTAAAGAGGCAAAGGA 5780
Query 2685 TATGCTCGAAAAGAAAGTCGAAGAACTCACATACCGTG-CACAGTTGGAGAAACGCTCAA 2743
|||||| |||||||||||||| |||||||||||||||| | |||||||||||||| | |
Sbjct 5781 TATGCTTGAAAAGAAAGTCGAGGAACTCACATACCGTGTC-CAGTTGGAGAAACGTTTGA 5839
Query 2744 GGGTTGACCTGGAAGAAGAAAAGAATCAGGAGATaaaaaaaCTGCAGAGTTCATTAGAGG 2803
||| |||| | ||||||| ||||| ||||||||| | ||||| ||||||||||| || |
Sbjct 5840 GGGGTGACTTAGAAGAAGCAAAGACTCAGGAGATTACGAAACTTCAGAGTTCATTCGAAG 5899
Query 2804 AAATGCGGAAGAAAGTGGATGAAACAAATGGGCTT-CTTGTTAAGGAACGTGAAGCTGCT 2862
|||||||||||||||| ||||||||||||| | || ||||| |||||||| ||||||||
Sbjct 5900 AAATGCGGAAGAAAGTTGATGAAACAAATGCG-TTGCTTGTGAAGGAACGCGAAGCTGCA 5958
Query 2863 AAGAAGGCCATTGAAGAAGCGCCTCCTGTTGT-AACAGAAACGCAAGTTTTAGTTGAAGA 2921
||||| ||| ||||||||| ||||||||| | || |||||| ||| | |||||||||||
Sbjct 5959 AAGAAAGCCGCTGAAGAAGCTCCTCCTGTTATCAA-AGAAACACAAATCTTAGTTGAAGA 6017
Query 2922 TACCCAGAAGATTGAA--GCATTGACAGAAGAAGTGGAGGGTCTAAAGGCTAATCTTGAA 2979
|||| ||||||||||| | || |||||| ||| |||| || ||||||||| ||| |||
Sbjct 6018 TACCAAGAAGATTGAATTG-AT-GACAGAGGAACTGGATAGTGTAAAGGCTACTCTAGAA 6075
Query 2980 CAAGAGAAACAAAGGGCCGATGATGCAAC-AAGGAAATTTGATGAAGCTCAAGAGTCTAG 3038
| |||||||||||||| ||||||||| ||| ||||| || |||||||||||||||
Sbjct 6076 TACGAGAAACAAAGGGCTGATGATGCAGTGAAG-AAATTCGAAGAAGCTCAAGAGTCTCT 6134
Query 3039 CGAGGACAGAAAGAA-AAAGTTGGAAGACACAGAGAAAAAAGCTCAGCAGCTCCAAGAGT 3097
||| |||| |||||| ||| | |||||| || ||||| |||| |||||| |||||||| |
Sbjct 6135 CGAAGACAAAAAGAAGAAACT-GGAAGAGACGGAGAAGAAAGGTCAGCAACTCCAAGAAT 6193
Query 3098 CCGTGACAAGGCTGGAAGAAAAATGCAACAATTTAGAATCAGAGAATAAGGTGTTACGAC 3157
|| |||||||| |||| ||||| |||| ||| ||||||||||||||||| || ||||| |
Sbjct 6194 CCCTGACAAGGATGGAGGAAAAGTGCAGCAACTTAGAATCAGAGAATAAAGTCTTACGGC 6253
Query 3158 AACAAGCTGTGTCCATTGCACCAAATAAGTTTCTCTCTGGCCGGTCCAGGTCGATTTTAC 3217
|||| ||||||||||| ||||||||||| |||||||||||||| ||| |||| |||||||
Sbjct 6254 AACAGGCTGTGTCCATGGCACCAAATAAATTTCTCTCTGGCCGCTCCCGGTCCATTTTAC 6313
Query 3218 AGAGAGGTTCAGAAAGTGGTCATCTAT-CAGTTGATGCAAGGCCAAGTTTGGATTTGCAT 3276
|||||||||| || ||||||||||| | |||| ||||| ||| |||| |||||| |||||
Sbjct 6314 AGAGAGGTTCTGAGAGTGGTCATCT-TGCAGTGGATGCGAGGTCAAGCTTGGATCTGCAT 6372
Query 3277 AGCCATTCAATTAACCGAAGGGATCTCTCTGAAGTGGACGATAAGCCACAGAAATCACTA 3336
||||||||||||||||| |||||||||||||||||||| || || |||||||||||| ||
Sbjct 6373 AGCCATTCAATTAACCGTAGGGATCTCTCTGAAGTGGATGACAAACCACAGAAATCATTA 6432
Query 3337 AACGAGAAGCAGCAAGAAAACCAAGAGCTGCTTATTCGCTGCATCGTTCAACATTTGGGT 3396
|||||||| ||||||||||| ||||| || ||||| |||||||| |||||||| |||||
Sbjct 6433 AACGAGAAACAGCAAGAAAATCAAGAACTACTTATCCGCTGCATTGTTCAACACTTGGGA 6492
Query 3397 TTCCAAGGGAAACGACCTGTTACAGCATGTATCATATACAAATG-CTTATTGCAATGGCG 3455
||||| ||||| |||||| |||||||||||||||| |||||||| || | |||||||| |
Sbjct 6493 TTCCAGGGGAACCGACCTATTACAGCATGTATCATTTACAAATGTCT-ACTGCAATGGAG 6551
Query 3456 GTCATTTGAAGTTGAAAGAACTAGTGTCTTTGATAGGATCATTCAGACAATAGGACAAGC 3515
|||||||||||||||| |||| ||||| |||||| | || |||||||||||||| || ||
Sbjct 6552 GTCATTTGAAGTTGAACGAACCAGTGTGTTTGATCGCATAATTCAGACAATAGGCCATGC 6611
Query 3516 TATTGAGACGCAAGACAACAACAATATACTAGCATATTGGTTATCCAATGCCTCGACATT 3575
||||||||| ||||| |||||||||| | | || |||||||||||||| ||||||||| |
Sbjct 6612 TATTGAGACTCAAGATAACAACAATACATTGGCCTATTGGTTATCCAACGCCTCGACACT 6671
Query 3576 GCTTTTACTCCTCCAACGCACGCTTAAAGCTAGTGGAGCAGCAGGAATGGCTCCACAGCG 3635
|| ||||||||||| ||||| || ||||||||||| ||||| || |||||||| |||||
Sbjct 6672 CCTCTTACTCCTCCAGCGCACACTCAAAGCTAGTGGTGCAGCTGGGATGGCTCCGCAGCG 6731
Query 3636 CCGTCGCTCATCTTCTGCCACTCTCTTTGGGAGGATGACTCAGAGCTTTCGCGGCACACC 3695
||| || |||||||||||||| || ||||| ||||||| ||||||||| ||||| ||||
Sbjct 6732 CCGCCGTTCATCTTCTGCCACCCTATTTGGAAGGATGAGTCAGAGCTTCCGCGGGGCACC 6791
Query 3696 CCAAGGTGTGAATCTTGCCATGATAAATGGTG--G----AGTTG-A-----TACCTTAAG 3743
|| |||||| ||||||||||||||||| |||| | || || | |||||| ||
Sbjct 6792 CCCAGGTGTAAATCTTGCCATGATAAACGGTGCTGCGGGAGGTGGAGCGGATACCTTTAG 6851
Query 3744 GCAAGTTGAGGCGAAATACCCAGCTCTCCTCTTCAAGCAACAGCTAACAGCCTATGTTGA 3803
|||||||| || ||||| || ||||| || || ||||| ||||| ||||| ||||||||
Sbjct 6852 ACAAGTTGAAGCAAAATATCCGGCTCTACTGTTTAAGCAGCAGCTCACAGCTTATGTTGA 6911
Query 3804 GAAA-ATATACGGAATGATTCGTGATAATTTGAAGAAAGAGATTTCTCCACTCCTTGGAT 3862
||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 6912 -AAAGATATACGGAATGATTCGGGATAACTTGAAGAAAGAGATTTCTCCACTCCTTGGAT 6970
Query 3863 TGTGCATTCAGGCACCAAGAACCTCAAGAGCGAGTTTAGTGAAAGGGGCATCTCGTTCTG 3922
|||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |
Sbjct 6971 TGTGCATTCAGGCACCTAGAACATCAAGAGCGAGTTTAGTGAAAGGAGCATCTCGTTCCG 7030
Query 3923 TTGGCAACACCGCAGCACAGCAAGCATTGATCGCCCACTGGCAAGGAATTGTAAAGAGCC 3982
|||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 7031 TTGGCAACACTGCAGCTCAGCAAGCACTGATCGCCCACTGGCAAGGAATTGTCAAGAGCC 7090
Query 3983 TCACGAACTTCCTCAACAATCTGAAATCGAACCACGTTCCTCCATTCTTGGTCCGGAAGG 4042
| || || |||||||| | ||| ||||| ||| | |||||| |||||||||| || || |
Sbjct 7091 TTACAAATTTCCTCAATACTCTAAAATCAAACAATGTTCCTTCATTCTTGGTGCGTAAAG 7150
Query 4043 TGTTTACGCAGATCTTCTCATTCATCAATGTTCAACTGTTTAATAGTCTTCTGTTAAGAC 4102
||||||| ||||| |||||||||||||||||||| |||||||| || ||| | || ||||
Sbjct 7151 TGTTTACACAGATATTCTCATTCATCAATGTTCAGCTGTTTAACAGCCTTTTATTGAGAC 7210
Query 4103 GGGAGTGCTGTTCATTTAGCAATGGGGAATACGTAAAAGCAGGATTAG-CTGAACTGGAG 4161
| ||||| ||||||||||| ||||| || ||||| ||||| || || | ||||| | ||
Sbjct 7211 GCGAGTGTTGTTCATTTAGTAATGGCGAGTACGTCAAAGCTGGCTT-GTCTGAATTAGAA 7269
Query 4162 CACTGGTGTTACAATGCAACAGATGAATATGCGGGTTCTTCTTGGGATGAGCTGAAGCAT 4221
|||||||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct 7270 CACTGGTGTTTTAAGGCAACAGATGAGTATGCTGGTTCTTCGTGGGATGAGCTTAAGCAT 7329
Query 4222 ATCAGACAGGCCATCGGGTTTCTGGTCATACACCAAAAACCTaaa-aaaaC-CTTGGACG 4279
|||||||||||||| ||||||||||| ||||| |||||||| ||| ||||| |||| | |
Sbjct 7330 ATCAGACAGGCCATTGGGTTTCTGGTTATACATCAAAAACC-AAAGAAAACTCTTG-ATG 7387
Query 4280 AGATAAGTCATGAGCTGTGTCCGGTGCTCAGCATACAACAACTATACCGAATAAGTACGA 4339
|||| |||||||| || || || ||||| ||||||||||| |||||| | || |||||||
Sbjct 7388 AGATCAGTCATGATCTTTGCCCTGTGCTAAGCATACAACAGCTATACAGGATCAGTACGA 7447
Query 4340 TGTATTGGGACGACAAGTATGGAACTCATAGCGTATCACCAGACGT 4385
|||| ||||||||||| || || ||||| ||||| || || |||||
Sbjct 7448 TGTACTGGGACGACAAATACGGCACTCACAGCGTCTCCCCGGACGT 7493
Score = 1572 bits (851), Expect = 0.0
Identities = 1172/1330 (88%), Gaps = 10/1330 (1%)
Strand=Plus/Plus
Query 13 GGAACTCCGGTTAACATCATTGTAGGCTCTCATGTTTGGATTGAAGATTCTGATGTGGCT 72
|||||||| || || ||||||||||| |||||||||||| ||||||| || | ||||||
Sbjct 3025 GGAACTCCAGTAAATATCATTGTAGGTTCTCATGTTTGGGTTGAAGACCCTCAAGTGGCT 3084
Query 73 TGGATTGATGGTC-TGGTTGAAAAGATCAATGGACAAGATGTTGAGGTTCAAGCCACAAA 131
||||||||||| | ||||||||| |||||||||||||| |||| | |||||||| |
Sbjct 3085 TGGATTGATGG-CGAGGTTGAAAAAATCAATGGACAAGAAGTTGTCATCCAAGCCACTAT 3143
Query 132 CGGAAAAAAGATCACTGCAAAGTTGTCAAAGATATACCCAAAAGATATGGAAGCACCTGC 191
||||| ||| ||||||||||||||||||||||||||||||| ||| ||||||| |||||
Sbjct 3144 TGGAAAGAAGGTCACTGCAAAGTTGTCAAAGATATACCCAAAGGATGTGGAAGCTCCTGC 3203
Query 192 AGGTGGAGTTGATGACATGACAAAGCTATCTTATTTGCATGAGCCTGGTGTTCTTCAGAA 251
||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct 3204 TGGTGGTGTTGATGACATGACAAAGCTCTCTTACTTGCATGAACCTGGTGTTCTTCAGAA 3263
Query 252 CTTAAAGATCAGATATGAACTTAATGAAATTTATACGTACACTGGAAATATCCTTATCGC 311
||| ||||||||||||||||||||||| || ||||| ||||| ||||| |||||||| ||
Sbjct 3264 CTTGAAGATCAGATATGAACTTAATGAGATCTATACATACACAGGAAACATCCTTATTGC 3323
Query 312 TATTAATCCATTTCAACGACTGCCGCATATTTATGATGCCCATATGATGCAACAGTACAA 371
||||| || ||||||||| |||| || || ||||||||||||||||||||||| |||||
Sbjct 3324 CATTAACCCGTTTCAACGATTGCCTCACATCTATGATGCCCATATGATGCAACAATACAA 3383
Query 372 GGGAGCACCATTTGGAGAATTAAGTCCTCATGTTTTTGCAGTTGCTGATGTTGCGTACAG 431
||||||||| |||||||| ||||||||||||||||||| |||||||||||||| |||||
Sbjct 3384 AGGAGCACCACTTGGAGAACTAAGTCCTCATGTTTTTGCTGTTGCTGATGTTGCATACAG 3443
Query 432 GGCAATGATCAATGAGGGCAAAAGCAATTCTATTCTTGTAAGTGGTGAGAGTGGAGCAGG 491
||| ||||| |||||||| ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct 3444 GGCCATGATTAATGAGGGAAAAAGCAATTCAATTCTTGTTAGTGGTGAGAGCGGAGCAGG 3503
Query 492 TAAAACTGAGACCACGAAGATGCTTATGAGATACCTTGCATATCTT-GGAGGTCGTGCTG 550
|||||||| ||||| |||||||||||||| ||||||||||| ||| || |||||||| |
Sbjct 3504 AAAAACTGAAACCACTAAGATGCTTATGAGGTACCTTGCATA-CTTGGGTGGTCGTGCAG 3562
Query 551 TTACAGAAGGCCGGACAGTTGAACAACAAGTTCTTGAATCAAATCCTGTCCTTGAGGCCT 610
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3563 TTACAGAAGGAAGGACAGTTGAACAACAAGTTCTTGAATCAAATCCTGTCCTTGAGGCCT 3622
Query 611 TTGGTAACGCCAAAACTGTCAGGAATAACAATTCCAGTCGATTTGGTAAATTTGTTGAAA 670
||||||| ||||||||||| || |||||||| || ||||| || ||||||||||||||||
Sbjct 3623 TTGGTAATGCCAAAACTGTGAGAAATAACAACTCAAGTCGCTTCGGTAAATTTGTTGAAA 3682
Query 671 TCCAATTTGATAAGCAAGGAAGAATATCTGGAGCTGC-AGTAAGGACGTATCTACTAGAG 729
||||||||||||||||||||||||||||||||||||| | |||| || |||||| |||||
Sbjct 3683 TCCAATTTGATAAGCAAGGAAGAATATCTGGAGCTGCTA-TAAGAACTTATCTATTAGAG 3741
Query 730 AGGTCTCGTGTCTGTCAGATTTCTGATCCAGAGCGCAATTACCACTGTTTTTATCTTCTA 789
||||||||||| || || ||||||||||| ||||| ||||||||||| || ||||||||
Sbjct 3742 AGGTCTCGTGTGTGCCAAATTTCTGATCCGGAGCGAAATTACCACTGCTTCTATCTTCTT 3801
Query 790 TGTGCTGCACCACAGGAGGAGCTCGAAAAGTACAAGTTGGGTCATCCCAAGACGTTTCAT 849
||||| ||||| |||||||| | |||||||||||| | |||||||| ||||| ||||||
Sbjct 3802 TGTGCCGCACCGCAGGAGGAAATTGAAAAGTACAAGCTCGGTCATCCAAAGACCTTTCAT 3861
Query 850 TATCTGAACCAGTCGAAATGCTTCGAACTTGTTGGTATAAGTGATGCTCATGATTA-CAT 908
|||||||||||||| || ||||| || ||||| |||||||| |||||||||||||| | |
Sbjct 3862 TATCTGAACCAGTCCAAGTGCTTTGAGCTTGTCGGTATAAGCGATGCTCATGATTATC-T 3920
Query 909 TGCGACAAGAAGAGCAATGGATATTGTCGGGATGAGCGAAAAGGAACAGGAAGCAATTTT 968
||||||||| ||||| ||||||||||| || || ||||||||||||||||||||||||||
Sbjct 3921 TGCGACAAGGAGAGCTATGGATATTGTTGGAATTAGCGAAAAGGAACAGGAAGCAATTTT 3980
Query 969 CAGAGTGGTTGCTGCAATTCTCCACCTTGGCAACGTCGAATTTACCAAGGGAAAAGAAGT 1028
||||||||||||||||||||| || |||||||| |||||||||| |||||| | |||||
Sbjct 3981 CAGAGTGGTTGCTGCAATTCTTCATATTGGCAACATCGAATTTACTAAGGGAGAGGAAGT 4040
Query 1029 GGATTCATCAGTTCCCAAAGATGACAAGTCGAAATTTCATCTTAACACAGTGGCAGAACT 1088
|||||||||||||||||| ||||| |||||||||||||||||||| |||| ||||||||
Sbjct 4041 GGATTCATCAGTTCCCAAGGATGAGAAGTCGAAATTTCATCTTAAAACAGCAGCAGAACT 4100
Query 1089 TCTCATGTGCGATGTAAAGGCGCTTGAAGATGCACTGTGTAAACGTGTTATGGTCACACC 1148
||| ||||| ||| ||||||| |||||||||||| | ||||||||||||||| |||||||
Sbjct 4101 TCTTATGTGTGATTTAAAGGCACTTGAAGATGCATTATGTAAACGTGTTATGATCACACC 4160
Query 1149 TGAGGAAGTTATCAAGAGAAGTCTAGATCCTCAGAGTGCTTTAATCAGCAGAGATGGTCT 1208
|||||||||||||||||||||||||||||| ||||||||| ||| |||||| || |||||
Sbjct 4161 TGAGGAAGTTATCAAGAGAAGTCTAGATCCACAGAGTGCTGTAACCAGCAGGGACGGTCT 4220
Query 1209 AGCTAAGACTA-TCTATTCTCGGTTATTTGATTGGTTGGTAGAAAAGATCAACGTCTCAA 1267
|||||||| | |||||||| | | || |||||||||||||| ||||| || || |
Sbjct 4221 CGCTAAGAC-AGTCTATTCTAGACTGTTCGATTGGTTGGTAGACAAGATTAATAAGTCGA 4279
Query 1268 TTGGCCAAGATGCGACTTCTAGATCACTCATTGGAGTCCTGGATATATACGGATTTGAGA 1327
|||| |||||||| | ||||||||| || |||||||| ||||| || || ||||||||||
Sbjct 4280 TTGGACAAGATGCCAATTCTAGATCTCTAATTGGAGTTCTGGACATTTATGGATTTGAGA 4339
Query 1328 GCTTTAAAAC 1337
|||| |||||
Sbjct 4340 GCTTCAAAAC 4349
Score = 255 bits (138), Expect = 2e-66
Identities = 154/162 (95%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 1342 AGTTTTGAACAGTTCTGTATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAG 1401
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 4396 AGTTTTGAACAGTTCTGTATTAATTTCACTAATGAGAAGTTGCAGCAACATTTCAACCAG 4455
Query 1402 CACGTTTTCAAGATGGAACAGGAGGAATACACAAAAGAAGCAATAGATTGGAGCTACATT 1461
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 4456 CACGTTTTCAAGATGGAACAGGAAGAGTACACAAAAGAAGCAATAGATTGGAGCTACATT 4515
Query 1462 GAATTTGTGGATAACCAAGATGTTCTCGATCTTATCGAAAAG 1503
||||||||||| || ||||||||||||||||| || ||||||
Sbjct 4516 GAATTTGTGGACAATCAAGATGTTCTCGATCTCATAGAAAAG 4557
> Ahg893981 jgi|Araly1|893981|Al_scaffold_0006_1977
Length=4620
Score = 983 bits (532), Expect = 0.0
Identities = 1564/2050 (76%), Gaps = 120/2050 (6%)
Strand=Plus/Plus
Query 23 TTAACATCATTGTAGGCTCTCATGTTTGGATTGAAGATTC-TGATGTGGCTTGGATTGAT 81
|||| || || || || ||||||||||||||||||||| | || | ||| |||||||||
Sbjct 53 TTAATATAATAGTTGGTTCTCATGTTTGGATTGAAGATCCAGGA-GCGGCATGGATTGAT 111
Query 82 GGTCTGGTTG-AAAAGATCAATGGAC-AAGATGTTGAGGTTCA-AG-CCACAAAC-GGAA 136
||| |||| ||| || ||||| | |||| ||| | | || || |||||||| ||||
Sbjct 112 GGTGAAGTTGTCAAA-ATTAATGG-CGAAGAAGTTCA--TGCACAGACCACAAACGGGAA 167
Query 137 AAAAGATCACT-G-CAA-AGTTGTCAAA-GATATACCCAAAAGATATGGAAGCACCTGCA 192
| | | | | ||| | | | |||| | ||| ||||| |||| || || || |
Sbjct 168 GACCG-T-TGTGGCCAATA-TCG-CAAACG-TATTTCCAAAGGATACAGAGGCGCCCCCT 222
Query 193 GGTGGAGTTGATGACATGACAAAGCTATCTTATTTGCATGAGCCTGGTGTTCTT-CAGAA 251
|| || |||||||||||||||||||| || || || ||||| || |||||| || | ||
Sbjct 223 GGGGGTGTTGATGACATGACAAAGCTCTCATACTTACATGAACCAGGTGTT-TTGAATAA 281
Query 252 CTTAAAGATCAGATATGAACTT-AATGAAATTTATACGTACACTGGAAATATCCTT-ATC 309
||| || ||||||| | || |||||||||||||| || ||||| || || ||| ||
Sbjct 282 CTTGGCCATGAGATATG-AGTTAAATGAAATTTATACATATACTGGCAACAT-CTTGATT 339
Query 310 GCTATTAATCCATTTCAACGACTGCCGCATATTTATGATGCCCATATGATGCAACAGTAC 369
||| | |||||||||||| | | || ||| | |||||| | ||||||||| | |||||
Sbjct 340 GCTGTAAATCCATTTCAAAGGTTACCACATCTCTATGATACTCATATGATGGAGCAGTAT 399
Query 370 AAGGGAGCACCATTTGGAGAATTAAGTCCTCATGTTTTTGCAGTTGCTGATGTTGCGTAC 429
|| |||||| ||||| |||||||| || ||||| |||||| |||| || || || |||
Sbjct 400 AAAGGAGCAGGTTTTGGGGAATTAAGCCCCCATGTGTTTGCAATTGCAGAAGTGGCTTAC 459
Query 430 AGGGCAATGATCAATGAGGGCAAAAGCAATTCTATTCTTGTAAGTGGTGAGAGTGGAGCA 489
||||||||||||||||||||||| ||||| || ||||| |||||||| || ||||| ||
Sbjct 460 AGGGCAATGATCAATGAGGGCAAGAGCAACTCAATTCTGGTAAGTGGGGAAAGTGGTGCT 519
Query 490 GGTAAAACTGAGACCACGAAGATGCTTATGAGATACCTTGCATATCTTGGAGGTCG-TGC 548
||||||||||||||||| |||||||||||| | |||||||| || || || ||||| | |
Sbjct 520 GGTAAAACTGAGACCACCAAGATGCTTATGCGCTACCTTGCTTACCTCGGTGGTCGAT-C 578
Query 549 TGTTACAGAAGGCCGGACAGTTGAACAACAAGTTCTTGAATCAAATCCTGTCCTTGAGGC 608
| ||||| ||||||| ||||| |||||||| || |||||||| || ||||| ||
Sbjct 579 CGGCGTTGAAGGAAGGACAGTGGAACAGCAAGTTCTGGAGTCAAATCCAGTTCTTGAAGC 638
Query 609 CTTTGGTAACGCCAAAACTGTCAGGAATAACAATTCCAGTCGATTTGGTAAA-TTTGTTG 667
||||| |||||||||||| ||||||||||||| |||||||||||||| ||| ||||| |
Sbjct 639 TTTTGGCAACGCCAAAACTCTCAGGAATAACAACTCCAGTCGATTTGG-AAAGTTTGTCG 697
Query 668 AAATCCAATTTGATAAGC-AAGGAAGAATATCTGGAGCTGCAGTAAGGACGTATCTACTA 726
| | || ||||| || | || |||||||||||||| || || | || ||| | |
Sbjct 698 AGCTTCAGTTTGACAA-CTGTGGGAGAATATCTGGAGCAGCTGTGCGAACATATTTGTTG 756
Query 727 GAGAGGTCTCGTGTCTGTCAGATTTCTGATCCAGAGCGCAATTACCACTGTTTTTATCTT 786
|| |||||||| || ||||| || || ||||| || | ||||||||||| ||||| |||
Sbjct 757 GAAAGGTCTCGAGTGTGTCAAATATCAGATCCTGAAAGAAATTACCACTGCTTTTACCTT 816
Query 787 CTATGTGCTGCACCACAGGAGGAGCTCGAAAAGTACAAGTTGGGTCATCCCAAGACGTTT 846
|||||||||| |||| ||||| ||||||| ||||||||| |||| ||| ||
Sbjct 817 TTATGTGCTGCCCCACCTGAGGAAAGAGAAAAGTTCAAGTTGGGAGATCCTAAGTTATTC 876
Query 847 CATTATCTGAACCAGTCGAAATGCTT-CGAACTTGTTGGTATAAGT-GATG-C-TC-ATG 901
|| || || || || ||||| || || |||| | ||| ||| |||| | | | |
Sbjct 877 CACTACCTAAATCAATCGAAGTG-TTATAAACTGGATGG----AGTGGATGACACCGAGG 931
Query 902 ATTA-CATTGCGACAAGAAGAGCAATGGATATTGTCGGGATGAGCGAAAAGGAACAGGAA 960
| || | |||| || || |||| ||||||||||| || || || ||| ||||||||||
Sbjct 932 AATATC-TTGCTACCCGACGAGCTATGGATATTGTTGGCATCAGTGAAGAGGAACAGGAT 990
Query 961 GCAATTTTCAGAGTGGTTGCTGCAATTCTCCACCTTGGCAACGTCGAA-TTTACCAAGGG 1019
|||||||| ||||| ||||||||||| || || || || || ||| || ||| | || ||
Sbjct 991 GCAATTTTTAGAGTTGTTGCTGCAATCCTGCATCTAGGTAATGTC-AATTTTGCAAAAGG 1049
Query 1020 AAAAGAAG-TGGATTCATCAGTTCCCAAAGATGACAAGTCGAA-ATTTCATCTTAACACA 1077
||||| || | || || |||||| || |||||||| || || || ||||||| | |
Sbjct 1050 AAAAG-AGATTGACTCCTCAGTTTTGAAGGATGACAAATC-AAGATATCATCTTGATGTA 1107
Query 1078 GTG-GCAGAACTTCTCATGTGCGATGTAAAGGCGCTTGAAGATGCACTGTG-T-AAACGT 1134
|| || |||||||| | ||| |||| |||| | ||||||||| | || | ||||||
Sbjct 1108 -TGTGCTGAACTTCTTAGGTGTGATGCAAAGAAAATGGAAGATGCA-T-TGATAAAACGT 1164
Query 1135 GTTATGGTCACACCTGAGGAAGTTATCA-AGAGAAGTCTAGATCCTCAGAGT--GCT-TT 1190
|| ||||| ||||| || || ||||| | | |||| || |||||| || | |||
Sbjct 1165 GTAATGGTGACACCAGAAGAGGTTATTACA-AGAACACTTGATCCT--GATTCAGCTACG 1221
Query 1191 AATCAGCAGAGATG-GTCTAGCTAAGACTATCTATTCTCGGTTATTTGATTGG-TTGGTA 1248
| ||||| |||| || |||| || ||||||||||| || || ||||||||| || ||
Sbjct 1222 GGT-AGCAGGGATGCGT-TAGCAAAAACTATCTATTCACGCTTGTTTGATTGGCTT-GTT 1278
Query 1249 GA-AAAGATCAAC-GTCTCAATTGGCCAAGATGCGACTTCT-AGATCACTCATTGGAGTC 1305
|| ||| || ||| | || || || |||||| ||| |||| ||| || | ||||| ||
Sbjct 1279 GATAAA-ATTAACAAT-TCTATCGGGCAAGATCCGAATTCTAAGA-CAATAATTGGTGTT 1335
Query 1306 CTGGATATATACGGATTTGAGAGCTTTAA-AACAAATAGTTTTGAACAGTTCTGTATTAA 1364
|| ||||| || || ||||| |||||||| | | || || ||||| ||||| || || ||
Sbjct 1336 CTTGATATCTATGGGTTTGAAAGCTTTAAGATC-AACAGCTTTGAGCAGTTTTGCATCAA 1394
Query 1365 TTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTTTTCAAGATGGAACAGGA 1424
||| || ||||| ||| |||| ||||||||||| |||||||| ||||| |||||||| ||
Sbjct 1395 TTTTACCAATGAAAAGCTGCAACAACATTTCAACCAGCACGTCTTCAAAATGGAACAAGA 1454
Query 1425 GGAATACACAAAAGAAGCA-A-TAGATTGGAGCTACATTGAATTTGTGGATAACCAAGAT 1482
|| || || ||||||| | | || | ||||| ||||| |||||||| |||||| |||||
Sbjct 1455 AGATTATACCAAAGAAG-AGATTA-ACTGGAGTTACATAGAATTTGTTGATAACAAAGAT 1512
Query 1483 GT-TCTCGATCTTATCGAAAAGAAGCCTGGTGGAATTGTGGCTCTCCTTGATGAAGCTTG 1541
|| | | ||||| || |||||||| ||||| ||| | | || || || |||||||| ||
Sbjct 1513 GTGT-TGGATCTCATTGAAAAGAAACCTGGAGGAGTCATTGCACTTCTAGATGAAGCATG 1571
Query 1542 CATGTTTCCGAAGTCGACCCATGAAACATTTGCGAACAAGCTTTATCAAAC-TTTTAAGA 1600
||||||||||||||||| |||||||||||||| | ||||| |||||||| || || |
Sbjct 1572 TATGTTTCCGAAGTCGACACATGAAACATTTGCTCAGAAGCTGTATCAAACGTTCAAAAA 1631
Query 1601 CACACAAGAGGTTCATC-AAGCCAAAACTCTCTCGAA-CAGATTTTGCTGT-TGCCCATT 1657
|| | ||| |||| | | || ||||| || ||||||| ||| ||||| | | ||||||
Sbjct 1632 CA-ATAAGCGGTTTA-CAAAACCAAAGCTATCTCGAACCAG-CTTTGCAATAT-CCCATT 1687
Query 1658 ATGCTGGAGAAGT-CCAGTATCAGTCTGATC-TATTTCTAGACAAAAACAAGGATTATGT 1715
|||||||||| || || |||||| |||| | | || || ||||| ||||| ||||| ||
Sbjct 1688 ATGCTGGAGAGGTAACA-TATCAGGCTGA-CTTGTTCCTTGACAAGAACAAAGATTACGT 1745
Query 1716 TATCCCTGAACATCAAGAT-TTGTTGGGT-GCTTCCAAGTG-TCCTTTTGTTG-TGGGTC 1771
| | |||||||| ||| || || | | |||||| |||| | ||||||| | | ||||
Sbjct 1746 GGTGGCAGAACATCAGGATCTT-TT-GATAGCTTCC-AGTGATACTTTTGTAGCT-GGTC 1801
Query 1772 TCTTTCCTCCG-CTCCCGGAAGAAACATC---TAAATCTTCAAAGTTTTCTTCCATTGGC 1827
| |||||| || || || ||||||||||| |||| | |||| ||||||||||| ||
Sbjct 1802 TATTTCCT-CGCCTACCAGAAGAAACATCAAGTAAAAC--CAAA-TTTTCTTCCATCGGG 1857
Query 1828 TCTCGCTTTAAG-TTGCAAC-TCCAGCAACTGATGGAAACAT-TAAACTCTACCGAGCCT 1884
|| ||||||||| || |||| || | | ||||||| || | | | || || || |||
Sbjct 1858 TCACGCTTTAAGCTT-CAACTTCAATC-TTTGATGGAGAC-TCTGAGTTCAACTGAACCT 1914
Query 1885 CACTACATCAGATGTGTGAAGCCCAATAACCTT-TTGAAGCCTGCCGTATTTGAGAATGT 1943
||||||||||||||||||||||||||||| | || ||||||||| | || ||||||||
Sbjct 1915 CACTACATCAGATGTGTGAAGCCCAATAATGTACTT-AAGCCTGCCATCTTCGAGAATGT 1973
Query 1944 AAACATTATGCAGCAACTT-CGGTGTGGTGGTGTTTTGGAAGCGATCAGAATCAGTTGTG 2002
||| | || || ||| || ||||||||||||||| ||||||| || |||||||| ||||
Sbjct 1974 GAACGTAATTCAACAA-TTGCGGTGTGGTGGTGTTCTGGAAGCTATTAGAATCAGCTGTG 2032
Query 2003 CGGGGTATCC 2012
| || |||||
Sbjct 2033 CAGGTTATCC 2042
> Ahg359426 jgi|Araly1|359426|fgenesh1_pg.C_scaffold_221000001
Length=502
Score = 828 bits (448), Expect = 0.0
Identities = 485/503 (96%), Gaps = 2/503 (0%)
Strand=Plus/Plus
Query 4089 TCTTCTGTTAAGACGGGAGTGCTGTTCATTTAGCAATGGGGAATACGTAAAAGCAGGATT 4148
|||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1 TCTTTTGTTAAGACGGGAGTGTTGTTCATTTAGCAATGGAGAATACGTAAAAGCAGGATT 60
Query 4149 AGCTGAACTGGAGCACTGGTGTTACAATGCAACAGATGAATATGCGGGTTCTTCTTGGGA 4208
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 61 GGCTGAATTGGAGCACTGGTGTTACAATGCAACAGATGAATATGCAGGTTCTTCTTGGGA 120
Query 4209 TGAGCTGAAGCATATCAGACAGGCCATCGGGTTTCTGGTCATACACCAAAAACCTaaaaa 4268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TGAGCTGAAGCATATCAGACAGGCCATCGGGTTTCTGGTCATACACCAAAAACCTAAAAA 180
Query 4269 aaCCTTGGACGAGATAAGTCATGAGCTGTGTCCGGTGCTCAGCATACAACAACTATACCG 4328
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 181 AACCTTGGACGAGATAAGTCATGAGCTGTGTCCGGTGCTCAGCATTCAACAACTATACCG 240
Query 4329 AATAAGTACGATGTATTGGGACGACAAGTATGGAACTCATAGCGTATCACCAGACGTGAT 4388
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct 241 AATAAGTACGATGTATTGGGACGACAAGTACGGAACTCACAGTGTATCACCAGACGTGAT 300
Query 4389 AGCAAATATGAGAGTACTAATGACAGAAGATTCAAACAATGCTGTTAGCAACTCTTTTCT 4448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 AGCAAATATGAGAGTACTAATGACAGAAGATTCAAACAATGCTGTTAGCAACTCTTTTCT 360
Query 4449 ACT-GGATGACGATTCGAGTATTCCTTTCTCGGTTGATGATTTGTCGAAATCGATGGAGC 4507
|| |||||||||||| || ||||||||||||||||||||| ||||||||||||||||||
Sbjct 361 -CTTGGATGACGATTCTAGCATTCCTTTCTCGGTTGATGATCTGTCGAAATCGATGGAGC 419
Query 4508 GGATAGAGATCGGAGATGTAGAACCACCACCTCTTATCCGAGAGAATTCTGGTTTTAGCT 4567
|||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 420 GGATAGAGATTGGAGATGTAGAACCACCGCCTCTCATCCGAGAGAATTCTGGTTTTAGCT 479
Query 4568 TTCTATTGCCATGTTCTGACTAA 4590
|||||||||||||||||||||||
Sbjct 480 TTCTATTGCCATGTTCTGACTAA 502
> Ahg920678 jgi|Araly1|920678|scaffold_101959.1
Length=4603
Score = 754 bits (408), Expect = 0.0
Identities = 1570/2112 (74%), Gaps = 155/2112 (7%)
Strand=Plus/Plus
Query 168 CCCAAAAGATA-TGGAAGCACC-TGCAGGTGGAGTTGATGACATGACAAAGCTATCTTAT 225
||| || |||| | ||||| || | | || || || ||||||||||||||||| || ||
Sbjct 171 CCC-AAGGATACT-GAAGCTCCAT-CTGGAGGTGTAGATGACATGACAAAGCTTTCATAC 227
Query 226 TTGCATGAGCCTGGTGTTCTTCA-G-AA-CTTAAAGATC-AGATATGAACTTAATGAAAT 281
|||||||||||||| | |||| | | || ||| ||| | ||||| ||||||||||||||
Sbjct 228 TTGCATGAGCCTGGAG-TCTT-ACGAAACCTT-GAGA-CAAGATACGAACTTAATGAAAT 283
Query 282 TTATACGTACACTGGAAATATCCTTATCGCTA-TTAATCCATTTCAACGACTGCCGCATA 340
||||| || || || |||||||| || || | |||||||||| ||| | ||||| ||||
Sbjct 284 ATATACATATACGGGGAATATCCTAATTGC-AGTTAATCCATTCCAAAGGCTGCCTCATA 342
Query 341 TTTATGATGCCCATATGATGCAACAGTACAAGGGAGCACCATTTGGAGAATTAAGTCCTC 400
||||||| | |||||||| |||| || |||||||| || |||||||| |||||||||
Sbjct 343 TTTATGAAACTGATATGATGGAACAATATAAGGGAGCTGCACTTGGAGAACTAAGTCCTC 402
Query 401 ATGTTTTTGCAGTTGCTGATGTTGCGTACAGGGCAATGATCAATGAGGGCAAAAGCAATT 460
||||||||||| ||| |||| ||| |||||||||||||| ||||| || |||| |||||
Sbjct 403 ATGTTTTTGCAATTGGGGATGCTGCATACAGGGCAATGATTAATGAAGGAAAAAACAATT 462
Query 461 CTATTCTT-GTAAGTGGTGAGAGTGGAGCAGGTAAAACTGAGACCACGAAGATGCTTATG 519
| ||| || |||||||| || ||||| || |||||||| ||||| || |||||||| |||
Sbjct 463 CGATT-TTGGTAAGTGGAGAAAGTGGTGCTGGTAAAACCGAGACGACAAAGATGCTCATG 521
Query 520 AGATACCTTGCATATCTT-GGA-GGTCGTGCTGTTACAGAAGGCCGGACAGTTGAACAAC 577
|| |||||||| | | || ||| || || ||| | |||||| ||||||||||||| |
Sbjct 522 AGGTACCTTGCCT-TTTTGGGAGGGAGGT-CTGGTGTAGAAGGAAGGACAGTTGAACAGC 579
Query 578 AAGTTCTT-GAATCAAATCCTGTCCTTGAGGCCTTTGGTAACGCCAAAACTGTCA-GGAA 635
||| |||| || || ||||| || || || || ||||| || || |||||| | | ||||
Sbjct 580 AAG-TCTTAGAGTCTAATCCAGTTCTCGAAGCATTTGGCAATGCAAAAACT-TTACGGAA 637
Query 636 TAACAATTCCAGTCGATTTGGTAAATTTGTTGAAATCCAATTTGATAAGCAA-GGAAGAA 694
|||||||| ||||| ||||||||||||||||||||||||||||| ||| || ||||| |
Sbjct 638 CAACAATTCAAGTCGTTTTGGTAAATTTGTTGAAATCCAATTTGACAAG-AATGGAAGGA 696
Query 695 TATCTGGAGCTGC-AGTAAGGACGTATCTACTAGAGAGGTCTCGTGTCTGTCAGATTTCT 753
||||||| || || | || |||| ||||| || |||||||| ||||| || || || ||
Sbjct 697 TATCTGGGGCAGCTATTA-GGACTTATCTGCTGGAGAGGTCCCGTGTTTGCCAAATCTCA 755
Query 754 GATCCAGAGCGCAATTACCACTGTTTTTATCTTCTATGTGCTGCACCAC-AGGAGGAGCT 812
||||| || | |||||||| || ||||||||||| |||||||| || | || |||| |
Sbjct 756 GATCCTGAAAGGAATTACCATTGCTTTTATCTTCTTTGTGCTGCTCCGCCAG-AGGATAT 814
Query 813 CGAA-AAGTACAAGTTGGGTCATCCCA-AGACGTTTCATTATCTGAACCAGTCGAAAT-G 869
|| ||||||||| ||| | |||| | | || |||||||| || ||||| || | |
Sbjct 815 A-AAGAAGTACAAGCTGGAAAA-CCCACATAAATTCCATTATCTAAATCAGTC-AAGTTG 871
Query 870 CTTCGAACTTGT-TGGTATA-AGTGATGCTCATGATTACATTGCGACAAGAAGAGCAATG 927
|| || ||| |||| | | ||||||| | || ||| ||| || |||||||| |||
Sbjct 872 -TTATAAATTGGATGGTGTTGA-TGATGCTAAAGAATACCTTGAAACCAGAAGAGCCATG 929
Query 928 GATATTGTCGGGATGAGCGAA--AAGGAACAGGAAGCAATTTTCAGAGTGGTTGCTGCAA 985
||| | || || || || || ||| ||||||| ||||| ||||| |||||||||||||
Sbjct 930 GATGTAGTTGGAATCAGT-AACGAAG-AACAGGAGGCAATCTTCAGGGTGGTTGCTGCAA 987
Query 986 TTCTCCACCTTGGCAACGTCGAATTTACCAAGGGAAAAGA-AGTGGATTCATCAGTTCC- 1043
|||| || ||||| ||| | || ||| ||||| |||| | | ||||| || || |
Sbjct 988 TTCTTCATCTTGGTAACATTGACTTTGGAAAGGGGGAAGAGA-TAGATTCTTCGGT-CAT 1045
Query 1044 CAAAGATGACAAG-T-C--GAAATTTCATCTTAACACAGTGGCAGAA-CTTCTCATGTGC 1098
||| ||| | ||| | | ||| | |||||||| | | |||| || || || |||||
Sbjct 1046 CAAGGAT-A-AAGATTCCCGAAGT--CATCTTAATATGGCGGCA-AAGCTACTTATGTGT 1100
Query 1099 GATGTAAAG-GCGCTTGAAGATGCACTGTGTAAA-CGTGTTATGGTCACACCTGAGGA-A 1155
| | || || || |||||||| || | | | ||||| ||||| |||||||| || |
Sbjct 1101 AACGCCCAGAGC-CTAGAAGATGCTCT-TATTAGGCGTGTAATGGTTACACCTGAAGAGA 1158
Query 1156 GTTATCAAGAGAAGTCTAGATCCTC-AGAGTGCT-TTAATCAGCAGAGATGGTCTAGCTA 1213
|||||| ||||| ||| ||||| | | | ||| || || || ||| || || |
Sbjct 1159 -TTATCACGAGAACTCTTGATCC-CGATAATGCAATTGCG-AGTAGGGATACCCTGGCCA 1215
Query 1214 AGACTATCTATTCTCGGTTATTTGATTGG-TTGGTAGAA-AAGATCAA--CGTCTCAATT 1269
|||| || ||||||| || ||||| ||| ||| | ||| || || || | || || |
Sbjct 1216 AGACAATATATTCTCACTTGTTTGACTGGATTG-T-GAACAAAATTAATACTTC-CA-TC 1271
Query 1270 GGCCAAGATGCGACT-TCTA-GATC-ACTCATTGGAGTCCTGGATATATACGGATTTGAG 1326
|| || || | || || | | || | | |||||||| |||||||| || || |||||
Sbjct 1272 GGGCAGGACCC-ACGGTCAAAG-TCGATT-ATTGGAGTTCTGGATATCTATGGGTTTGAA 1328
Query 1327 AGCTTTAAAA--CAAATAGTTTTGAACAGTTCTGTATTAATTTCACAAATGAGAAGTTGC 1384
|| ||| ||| ||| ||||||||| || ||||| || |||||||| ||||| || |||
Sbjct 1329 AG-TTTCAAATGCAA-TAGTTTTGAGCAATTCTGCATCAATTTCACGAATGAAAAACTGC 1386
Query 1385 AGCAACATTTCAATCAGCACGT-TTTCAAGATGGAACAGGAGGAATACACAAAAGAAGCA 1443
| || ||||| |||||||| || ||| |||||||| ||||| || ||||| ||||||| |
Sbjct 1387 AACAGCATTTTAATCAGCATGTCTTT-AAGATGGAGCAGGAAGAGTACACCAAAGAAG-A 1444
Query 1444 -ATAGATTGGAGCTACATTGAATTTGTGGATAACCAAGATGTTCTCGATCTTA-TCGAAA 1501
|| |||||||| ||||| || ||| | ||||||||||||||||| ||| ||| | ||||
Sbjct 1445 GATTGATTGGAGTTACATAGAGTTTATTGATAACCAAGATGTTCTTGAT-TTAATTGAAA 1503
Query 1502 AGAAGCCTGGTGGAATTGTGGCTCTCCTTGATGAAGCTTGCATGTTTCCGAAGTCGACCC 1561
| || || || ||| || | | || || |||||||| ||||||||||| ||||| || |
Sbjct 1504 AAAAACCAGGAGGAGTTATTTCACTTCTAGATGAAGCCTGCATGTTTCCCAAGTCTACAC 1563
Query 1562 ATGAAACATT-TG-CGAACAAGCTTTATCAA-ACTTTTAAGACA-CACAAGAGGTTCATC 1617
||||||| || | | || ||||| | || | || ||||| | | |||||||| || |
Sbjct 1564 ATGAAACCTTCTCTC-AA-AAGCTGT-TCCAGACGTTTAAAA-ATCACAAGAGATTTGCC 1619
Query 1618 AAGCCAAAACTCTCTCGAACAGATTTTGCTGT-TGCCCATTATGCTGGAGAAGTCCAGT- 1675
|| || || |||||||| || |||||| | | | | |||||||| ||||| || | |
Sbjct 1620 AAACCGAAGCTCTCTCGCACTGATTTTACCATAT-CACATTATGCAGGAGAGGTT-ACTT 1677
Query 1676 ATCAGTCTGATCTATTTC-TAGACAAAAACAAGGATTATGTTA-TCCCTGAACATCAAG- 1732
|||| || | | ||||| | || || ||||| |||||| | | | ||||||||||||
Sbjct 1678 ATCAATCAAACC-ATTTCATCGATAAGAACAAAGATTATAT-AGTTGCTGAACATCAAGC 1735
Query 1733 ATT-TGTTGGGTGCTTCCAAGTGTCCT-TTTGTTGTGGGTCTCTTTCC-TCCGCTCCCGG 1789
| | | || ||| || || || | ||||| | |||| | || || | |||| | |
Sbjct 1736 ACTAT-TTAC-TGCATCTAATTG-CAAGTTTGTGGCGGGTTTGTT-CCATGCGCTTCATG 1791
Query 1790 AAGAAACATCTAAATCTTCAAAGTTTTCTTCCATTGGCTCTCGCTTTAAGTTGCAACTCC 1849
|||| |||| | || ||||| |||||||||||||| || || || ||| ||||| |
Sbjct 1792 AAGACTCATCCAGGTCATCAAAATTTTCTTCCATTGGGTCACGGTTCAAGCAACAACTTC 1851
Query 1850 AG-CAACTGATGGAAACATTAAACTC-TACCGAGCCTCACTACATCAGATGTGTGAAGCC 1907
| | ||||||||| || | || | ||| || ||||| |||||||||||| | |||||
Sbjct 1852 ACTCG-CTGATGGAATCACTGAA-TGGTACAGAACCTCATTACATCAGATGTATAAAGCC 1909
Query 1908 CAATAACCTT-TTGAAGCCTGCCGTAT-TT-GAGAATGTAAACATTATGCAGCAACTT-C 1963
|| || || || || |||| |||| || |||||| | ||| | || || ||| || |
Sbjct 1910 GAACAATGTTCTTAAA-CCTG--GTATCTTTGAGAATTTCAACGTCATTCATCAA-TTAC 1965
Query 1964 GGTGTGGTGGTGTT-TTGGAAGCGATCAGAATCAGTTGTGCGGGGTATCCCACTC-G--T 2019
| ||||| |||||| ||| | || || || |||||||| || || ||||| || | | |
Sbjct 1966 GTTGTGGGGGTGTTCTTG-AGGCCATTAGGATCAGTTGCGCTGGCTATCCTAC-CAGGCT 2023
Query 2020 AAACCTTTCTTTGAGTT-CATTAACCGTTTTGGACTTCTATATCCTCGA-GCTCTAGAAG 2077
|||| || ||| || | | |||||||||| || || ||| || | | | ||||
Sbjct 2024 TG-CCTT-CTATGACTTTC-TCGACCGTTTTGGTCTCCTCGCTCCA-GAAGTTTTGGAAG 2079
Query 2078 GGAACTACGAGGAGAAGGCT-GCA-GCGCAAAAGAT-CTTAGACAATATTGGACTCAAAG 2134
| || || || || || | | || || |||| ||| ||| || || | || || | |
Sbjct 2080 GAAATTATGATGATAAAG-TAGCTTGC-CAAATGATTCTT-GATAAGAAAGGTCTGAG-G 2135
Query 2135 GA-TACCAGGTTGGTAAA-ACAAAGGTGTTT--TTAAGGGCGGGTCAGATGGCTGAACTC 2190
|| |||||||| || ||| |||||| | ||| || | || |||||||||||||||||
Sbjct 2136 GACTACCAGGTAGG-AAAGACAAAGAT-TTTCCTTC-GAGCTGGTCAGATGGCTGAACTA 2192
Query 2191 GACGCGAGAAGA 2202
|| ||||| |||
Sbjct 2193 GATGCGAGGAGA 2204
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 173656705599
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5