BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G54960.1
Length=2183
Score E
Sequences producing significant alignments: (Bits) Value
Ahg314880 jgi|Araly1|314880|fgenesh1_pm.C_scaffold_1003660 2944 0.0
Ahg470979 jgi|Araly1|470979|fgenesh2_kg.1__933__AT1G09000.1 1389 0.0
> Ahg314880 jgi|Araly1|314880|fgenesh1_pm.C_scaffold_1003660
Length=1959
Score = 2944 bits (1594), Expect = 0.0
Identities = 1817/1925 (94%), Gaps = 13/1925 (1%)
Strand=Plus/Plus
Query 13 TTCCGTTCTACCACCGACGATGAGAATCAAGAGAATCATCCTCCTCCGTTTCCTTCTCTC 72
|||||| ||| | |||||||||| || ||||||||||||||||||||||||||| |||||
Sbjct 40 TTCCGTACTAACGCCGACGATGACAACCAAGAGAATCATCCTCCTCCGTTTCCTACTCTC 99
Query 73 CTCGCCGATAAAATCACTTCCTGTATCCGCAAATCAATGGTTTTCGCCAAATCC-CAGTC 131
|||||||||||||||||||| |||||||||||||| ||||||||||||||| || | ||
Sbjct 100 CTCGCCGATAAAATCACTTCGTGTATCCGCAAATCCATGGTTTTCGCCAAA-CCTAATTC 158
Query 132 ACCTCCGA-ATAACTCCACCGTACAAATC-AAACCTCCGATTCGGTGGCGGAAAGGTCAG 189
||| || | ||||||||||||||| | | ||||||||||||||||||||||||||||||
Sbjct 159 ACCACC-ACCTAACTCCACCGTACAGA-CGAAACCTCCGATTCGGTGGCGGAAAGGTCAG 216
Query 190 TTAATTGGCCGTGGCGCTTTTGGTACTGTGTATATGGGAATGAATCTCGATTCCGGTGAG 249
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 217 TTAATTGGCCGTGGTGCTTTTGGTACTGTGTATATGGGGATGAATCTCGATTCCGGTGAG 276
Query 250 CTTCTCGCCGTTAAACAGGTTCTGATTACATCTAATTGTGCATCCAAGGAAAAAACTCAG 309
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 277 CTTCTCGCCGTTAAACAGGTTTTGATTGCATCTAATTGTGCATCCAAGGAAAAAACTCAG 336
Query 310 GCTCATATTCAGGAGCTTGAAGAGGAAGTGAAGCTACTCAAGAATCTCTCTCATCCAAAT 369
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 337 GCTCATATTCAGGAGCTTGAAGAGGAAGTGAAGCTACTCAAGAATCTCTCCCATCCAAAT 396
Query 370 ATAGTTAGATATTTGGGTACGGTGAGGGAAGATGAAACTTTGAATATCTTGCTTGAATTT 429
||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 397 ATAGTCAGGTATTTGGGTACGGTGAGGGAAGATGAAACTTTGAACATCTTGCTTGAATTT 456
Query 430 GTTCCTGGTGGATCTATATCTTCACTCTTGGAGAAATTTGGAGCCTTTCCTGAATCTGTT 489
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 457 GTTCCTGGTGGATCTATATCTTCACTTTTGGAGAAATTTGGATCCTTTCCTGAATCTGTT 516
Query 490 GTTCGGACATACACGAACCAACTGCTTTTGGGATTGGAGTACCTTCATAATCATGCCATT 549
|||||||||||||| || ||||||||||| || |||||||||||||| |||||||| |||
Sbjct 517 GTTCGGACATACACAAAGCAACTGCTTTTAGGCTTGGAGTACCTTCACAATCATGCTATT 576
Query 550 ATGCACCGTGACATTAAGGGTGCTAATATCCTTGTGGATAATCAAGGATGCATTAAACTT 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 577 ATGCACCGTGACATTAAGGGTGCTAATATCCTTGTGGATAATCAAGGATGCATTAAACTT 636
Query 610 GCTGATTTTGGTGCGTCCAAACAGGTAGCGGAGTTGGCTACTATTTCGGGTGCCAAATCT 669
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 637 GCTGATTTTGGTGCATCCAAACAGGTAGCTGAGTTGGCTACTATTTCGGGTGCCAAATCT 696
Query 670 ATGAAAGGAACTCCCTATTGGATGGCTCCAGAAGTTATTCTTCAAACCGGGCATAGCTTT 729
|||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 697 ATGAAAGGGACTCCCTATTGGATGGCTCCGGAAGTTATTCTTCAAACTGGGCATAGCTTT 756
Query 730 TCTGCTGATATTTGGAGTGTAGGATGCACAGTGATTGAAATGGTGACTGGAAAAGCTCCT 789
||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||
Sbjct 757 TCTGCTGATATTTGGAGCGTAGGTTGCACAGTGATTGAAATGGTAACTGGCAAAGCTCCT 816
Query 790 TGGAGCCAGCAATATAAAGAGATTGCTGCTATTTTCCACATTGGAACGACGAAATCGCAT 849
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 817 TGGAGCCAGCAGTATAAAGAGATTGCTGCTATTTTCCACATTGGAACGACGAAGTCGCAT 876
Query 850 CCTCCAATCCCTGACAATATCTCCTCTGACGC-AAATGATTTTTTGCTCAAGTGTCTGCA 908
|||||||||||||||||| |||||||||| || ||| |||||||||||||||||||||||
Sbjct 877 CCTCCAATCCCTGACAATCTCTCCTCTGATGCGAAA-GATTTTTTGCTCAAGTGTCTGCA 935
Query 909 GCAGGAACCAAATCTGCGGCCAACCGCTTCTGAGCTGCTAAAGCATCCATTTGTTACGGG 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 936 GCAGGAACCAAATCTGCGGCCAACCGCTTCTGAGCTGCTAAAGCATCCATTTGTTACGGG 995
Query 969 CAAACAGAAGGAATCTGCGTCTAAAGATCTTACTTCATTTATGGACAATTCATGCAGTCC 1028
|||||||||||||||||| |||| ||||||| ||||| | |||||||||||||||||| |
Sbjct 996 CAAACAGAAGGAATCTGCTTCTATAGATCTTGCTTCAGTCATGGACAATTCATGCAGTAC 1055
Query 1029 TTTACCATCAGAGTTGACTAACATTACGAGCTATCAAACATCTACGAGTGACGATGTAGG 1088
||||||||| |||||||| ||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct 1056 TTTACCATCCGAGTTGACAAACATTAAGAGCTATCAAATGTCTACAAGTGAAGATGTAGG 1115
Query 1089 AGACATCTGTAACTTGGGTAGTCTGACTTGTACACTTGCTTTCCCTGAGAAATCAATCCA 1148
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1116 AGACATCTGTAACTTGGGTAGTCTGACTTGTACACTTGCTTTCCCTGAGAATTCAATCCA 1175
Query 1149 AAATAACAGTTTGTGTCTGAAAAGTAATAACGGGTATGATGACGATGATGAT-A-A-TGA 1205
|||||||||||||||||||||| ||||||||||||||||||| ||||||||| | | |||
Sbjct 1176 AAATAACAGTTTGTGTCTGAAAGGTAATAACGGGTATGATGAGGATGATGATGATAATGA 1235
Query 1206 TATGTGTTTGATTGACGATGAGAATTTCTTGACATATAATGGAGAGACTGGCCCTAGTCT 1265
|||||||||| ||||||||||| |||||||||||||||||||| | ||| ||||||||||
Sbjct 1236 TATGTGTTTGTTTGACGATGAGGATTTCTTGACATATAATGGAAAAACTTGCCCTAGTCT 1295
Query 1266 TGACAATAATACTGATGCCAAGAAGAGCTGTGATACCATGAGTGAGATCTCTGATATTTT 1325
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 1296 TGACAATAATACTGATGCGAGGAAGAGCTGTGATACCATGAGTGAGATCTCTGATATTTT 1355
Query 1326 GAAGTGCAAATTTGACGAAAATTCTGGAAACGGAGAAACAGAGACGAAAGTTAGTATGGA 1385
|||||| || |||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 1356 GAAGTGTAACTTTGACGAAAATTCTGGAAATGGAGAAACAGAGACGAAAAATAGTATGGA 1415
Query 1386 AGTTGACCATCCATCATACTCGGAGGATGAAAATGAGCTGACTGAGTCGAAAATCAAAGC 1445
||||||||||||||| ||||| ||||||||||||||| |||| ||||| |||||||||||
Sbjct 1416 AGTTGACCATCCATCGTACTCAGAGGATGAAAATGAGTTGACCGAGTCAAAAATCAAAGC 1475
Query 1446 TTTCTTAGATGACAAGGCTGCAGAGTTAAAGAAGTTACAGACGCCTCTGTACGAAGAATT 1505
|||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct 1476 TTTCTTAGATGACAAGGCTGCAGATTTAAAGAAGTTACAGACGCCTCTCTATGAAGAATT 1535
Query 1506 CTACAACGGTATGATCACATGCTCCCCCATCTGCATGGAGAGTAACATCAATAACAATAA 1565
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1536 CTACAACGGTATGATCACATGCTCTCCCATCTGCATGGAGAGTAACATCAATAACAATAA 1595
Query 1566 ACGAGAGGAGGCACCTCGTGGTTTCTTGAAACTGCCTCCAAAAAGTCGGTCTCCGAGTCA 1625
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 1596 ACCAGAGGAGGCACCTCGTGGTTTCTTGAAACTGCCTCCAAAAAGTAGGTCTCCGATTCA 1655
Query 1626 GGGCCATATTGGTCGATCACCTTCTAGA-GCAACAGATGCAGCCTGTTGTTCCAAGAGTC 1684
||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||| |
Sbjct 1656 GGGCCATATTGGTCGTTCACCTTCTAGAAG-AACAGATGCAGCCTGTTGTTCCAAGAGCC 1714
Query 1685 CAGAAAGTGGTAATAGCTCTGGTGCCCCGAAGAATAGCAATGCAAGTGCTGGTGCTGAAC 1744
|||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct 1715 CAGAAAGTGGTAGTAGCTCTGGTGTGCCGAATAATAGCAATGCAAGTGCTGGTGCAGAAC 1774
Query 1745 AAGAATCAAACAGTCAAAGTGTCGCGCTGTCGGAGATAGAGAGGAAGTGGAAGGAAGAGC 1804
||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1775 AAGAATCAAACAGCCAGAGTGTCGCGCTCTCAGAGATAGAGAGGAAGTGGAAGGAAGAGC 1834
Query 1805 TTGATCAAGAACTTGAAAGAAAGCGAAGAGAGATTACACGGCAAGCAGGGATGGGATCAT 1864
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1835 TTGATCAAGAACTTGAAAGAAAGCGAAGAGAGATTACGCGGCAAGCAGGGATGGGATCAT 1894
Query 1865 CCCCGAGAGATAGAAGCTTGAGCCGACATAGAGAGAAGTCAAGATTTGCATCTCCAGGCA 1924
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1895 CCCCGAGAGATAGAAGCTTGAGCCGACATAGAGAGAAGTCAAGGTTTGCATCTCCAGGCA 1954
Query 1925 AATGA 1929
|||||
Sbjct 1955 AATGA 1959
> Ahg470979 jgi|Araly1|470979|fgenesh2_kg.1__933__AT1G09000.1
Length=2245
Score = 1389 bits (752), Expect = 0.0
Identities = 1418/1731 (82%), Gaps = 80/1731 (5%)
Strand=Plus/Plus
Query 7 CTTGTCTTCCGTTCTACCACCGACGATGAGAATCAAGAGAATCATCCTCCTCCGTTTCCT 66
||||| |||||| |||| ||||||| || || || |||||||| ||||| || ||
Sbjct 105 CTTGTTTTCCGTCCTACTTCCGACGACGATAACCAGGAGAATCA---GCCTCCATTACCC 161
Query 67 TCTCTCCTCGCCGATAAAATCACTTCCTGTATCCGCAAATC-AATGGTTTTCGCCAAA-- 123
||||||||||||||| ||||| ||||| ||||||||||| || | |||| ||||
Sbjct 162 GGTCTCCTCGCCGATAAGATCACCTCCTGCATCCGCAAATCGAA-GATTTTTATCAAACC 220
Query 124 -T-C-CC-AGTCACCTCCGAATAACT-CCACCGTACAAATCAAACCTCCGA-TTCGGTGG 177
| | || | | ||||| | || ||||||| | || |||||||| ||| ||||
Sbjct 221 CTCCTCCTCGCCTCCTCCTCCT-GCTAACACCGTAGACATGGCACCTCCGATTTC-GTGG 278
Query 178 CGGAAAGGTCAGTTAATTGGCCGTGGCGCTTTTGGTACTGTGTATATGGGAATGAATCTC 237
||||||||||||||||||| || ||||| || ||||| ||||| ||||| |||||||||
Sbjct 279 AGGAAAGGTCAGTTAATTGGTCGCGGCGCGTTCGGTACGGTGTACATGGGTATGAATCTC 338
Query 238 GATTCCGGTGAGCTTCTCGCCGTTAAACAGGTTCTGATTACATCTAATTGTGCATCCAAG 297
|| ||||| |||||||||||||||||||||||||||||| || | |||| ||| ||||||
Sbjct 339 GACTCCGGGGAGCTTCTCGCCGTTAAACAGGTTCTGATTGCAGCCAATTTTGCTTCCAAG 398
Query 298 GAAAAAACTCAGGCTCATATTCAGGAGCTTGAAGAGGAAGTGAAGCTACTCAAGAATCTC 357
|||||| |||||||||||||||||||||||||||| ||||| ||||| || || ||||||
Sbjct 399 GAAAAAGCTCAGGCTCATATTCAGGAGCTTGAAGAAGAAGTTAAGCTTCTTAAAAATCTC 458
Query 358 TCTCATCCAAATATAGTTAGATATTTGGGTACGGTGAGGGAAGATGAAACTTTGAATATC 417
|| ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct 459 TCCCATCCAAATATAGTTAGATATTTGGGTACAGTGAGGGAAGATGATACGCTGAATATC 518
Query 418 -TTGCTTGAATTTGTTCCTGGTGGATCTATATCTTCACTCTTGGAGAAATTTGGAGCCTT 476
|| || || |||||||| |||||||||||||| || |||||||||||||| ||| ||||
Sbjct 519 CTT-CTCGAGTTTGTTCCCGGTGGATCTATATCATCGCTCTTGGAGAAATTCGGA-CCTT 576
Query 477 TCC-TGAATCTGTTGTTCGGACATACACGAACCAACTGCTTTT-GGGATTGGAGTACCTT 534
||| |||||| ||||| ||||||||||||| || |||||||| ||| ||||| |||||
Sbjct 577 TCCCTGAATCAGTTGTCCGGACATACACGAGGCAGCTGCTTTTAGGG-TTGGATTACCTG 635
Query 535 CATAATCATGCCATTATGCACCGTGACATTAAGGGTGCTAATATCCTTGTGGATAATCAA 594
|| |||||||| ||||||||| | ||||||||||| ||||||||||||||||||||| ||
Sbjct 636 CACAATCATGCAATTATGCACAGAGACATTAAGGGGGCTAATATCCTTGTGGATAATAAA 695
Query 595 GGATGCATTAAACTTGCTGATTTTGGTGCGTCCAAACAGGTAGCGGAGTTGGCTACTATT 654
||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct 696 GGATGCATTAAACTTGCTGATTTTGGTGCATCTAAACAAGTAGCTGAGTTGGCTACGATG 755
Query 655 TCGGGTGCCAAATCTATGAAAGGAACTCCCTATTGGATGGCTCCAGAAGTTATTCTTCAA 714
| ||||| |||||||||||||| || || |||||||||||||| |||||||||||||||
Sbjct 756 ACTGGTGCAAAATCTATGAAAGGGACACCATATTGGATGGCTCCGGAAGTTATTCTTCAA 815
Query 715 ACCGGGCATAGCTTTTCTGCTGATATTTGGAGTGTAGGATGCACAGTGATTGAAATGGTG 774
|| || |||||||| ||||||||||| ||||| ||||| || ||||| ||||||||||||
Sbjct 816 ACTGGACATAGCTTCTCTGCTGATATATGGAGCGTAGGCTGTACAGTTATTGAAATGGTG 875
Query 775 ACTGGAAAAGCTCCTTGGAGCCAGCAATATAAAGAGATTGCTGCTATTTTCCACATTGGA 834
||||| || ||||||||||| ||||| ||||||||| |||||||||| ||| ||| |||
Sbjct 876 ACTGGGAAGGCTCCTTGGAGTCAGCAGTATAAAGAGGTTGCTGCTATCTTCTTCATCGGA 935
Query 835 ACGACGAAATCGCATCCTCCAATCCCTGACAATATCTCCTCTGACGCAAATGATTTTTTG 894
|| || ||||| ||||||||||| ||||| | | |||||||||| ||||| |||||| ||
Sbjct 936 ACAACAAAATCACATCCTCCAATACCTGATACTCTCTCCTCTGATGCAAAAGATTTTCTG 995
Query 895 CTCAAGTGTCTGCAGCAGGAACCAAATCTGCGGCCAACCGCTTCTGAGCTGCTAAAGCAT 954
||||||||||||||| ||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct 996 CTCAAGTGTCTGCAGGAGGTACCAAATCTGCGGCCAACCGCATCTGAGCTACTAAAGCAT 1055
Query 955 CCATTTGTTACGGGCAAACAGAAGGAATCTGCGTCTAAAGATCTTACTTCATTT-ATGGA 1013
|| ||||||| ||| ||||| ||||||||||| |||| |||||| ||| | | ||| |
Sbjct 1056 CCTTTTGTTATGGGAAAACACAAGGAATCTGCTTCTACTGATCTTGGTTC-TGTCATGAA 1114
Query 1014 CAAT-TCATGCAGTCCTTTACCATCAGAGTTGACTAACATTACGAGCTA-TCAAACAT-C 1070
|||| | | | | ||| |||| | | || | | ||||| || |||| | || | || |
Sbjct 1115 CAATCTTA-GTACTCCACTACCGTTACAGATAAATAACACTAAGAGC-ACTCCAG-ATTC 1171
Query 1071 TACGA-GTGACGATGTAGGAGACATCTGTAACTTGGGTAGTCTGA-CT-TGTACACTTGC 1127
||| | | ||||||||||| ||||| ||||||||||| ||| ||| || | | ||||||
Sbjct 1172 TAC-ATGCGACGATGTAGGTGACATGTGTAACTTGGGCAGTTTGAACTAT-T-CACTTG- 1227
Query 1128 TT--TCCCTGAGAAATCAATCCAAAATAA-CAGTTTGTGTCTG-AAAAGTAATAACGGGT 1183
| ||| || ||||||||| ||||| || || ||| || | |||| | |||| ||
Sbjct 1228 TAAATCC-TGTGAAATCAATGCAAAACAAACA-TTTATGGCAACAAAA-TGATAATGG-- 1282
Query 1184 ATGATGACGATGATGATAATGATATGTGTTTGATTGACGATGAGAATTTCTTGACATATA 1243
| | ||| || | || ||||||||||||||||| ||||||||||||||||||| |
Sbjct 1283 AGG-TGATGA--A-GAC---GATATGTGTTTGATTGATGATGAGAATTTCTTGACATTTG 1335
Query 1244 ATGGAGAGACTG-GCCCTAGTCTTGACAAT-AATACTGATGCC-AAGAAGAGCTGTGATA 1300
| ||||||| || | |||| |||| ||| ||| |||| | |||||||| | ||||
Sbjct 1336 ACGGAGAGA-TGAGGCCTACCCTTG-CAAACAATTGTGAT-CTGAAGAAGAGATATGATG 1392
Query 1301 CCATGAGTGAGATCTCTGATAT--TTTGAAGTGCAAATTTGACGAAAATTCTGGAAACGG 1358
| || ||||| || || || | |||||||| |||||||||||||| | |||| || ||
Sbjct 1393 CAATAAGTGATATGTCC-AT-TGCTTTGAAGTCCAAATTTGACGAAAGTCCTGGTAATGG 1450
Query 1359 AGA-AACAGAGACGA-AAGTTAGTATGGAA-GTTGACCATCCATCATACTCGGAGGATGA 1415
||| || |||||| | || | || |||||| || ||||| || |||||||| ||||||||
Sbjct 1451 AGAGAA-AGAGACTACAA-TGAGCATGGAATGT-GACCAACCTTCATACTCAGAGGATGA 1507
Query 1416 AAATGAGCTGACTGAGTCGAAAATCAAAGCTTTCTTAGATGACAAGGCTGCAGAGT-TAA 1474
|||||||||| ||||| ||||||||||||||||||||||| ||||||||||| | |||
Sbjct 1508 TGATGAGCTGACCGAGTCAAAAATCAAAGCTTTCTTAGATGAGAAGGCTGCAGA-TCTAA 1566
Query 1475 AGAAGTTACAGACGCCTCTGTACGAAGAATTCTACAACGGTATGATCACATGCTCCCCCA 1534
||||||||||||||||||| || ||||||| |||||| ||||||||| |||||| ||||
Sbjct 1567 AGAAGTTACAGACGCCTCTTTATGAAGAATACTACAATAGTATGATCATATGCTCTCCCA 1626
Query 1535 -TCTGCATGGAGAGTAACATCAA-TAACAATAAACGAGAGGAGGCACCTCGTGGTTTCTT 1592
| || ||||||||||| | | ||||| |||| ||||||| | ||||||||||| |
Sbjct 1627 GT-TGTATGGAGAGTAATTT-ATGTAACAGTAAAAGAGAGGAAACTGCTCGTGGTTTCCT 1684
Query 1593 GAAACTGCCTCCAAAAAGTC-GGTCTCCGAGTCAGGG-CCATATTGGTCGATCACCTTCT 1650
|||||||||||||||||| | |||| ||||||| ||| || | ||||| | ||||||||
Sbjct 1685 GAAACTGCCTCCAAAAAG-CAGGTCACCGAGTCGGGGTCC-TCTTGGTGGTTCACCTTCA 1742
Query 1651 AGAGCAACAGATGCAGCCT-GTTGTTCCAAGAGTCCAGAAAGTGGTAATAG 1700
|||||| |||| || | | ||||||||||||| |||| |||||||| |||
Sbjct 1743 AGAGCAGCAGACACAAC-TAGTTGTTCCAAGAGCCCAGGAAGTGGTAGTAG 1792
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82160658465
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5