BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G55205.2 Length=511 Score E Sequences producing significant alignments: (Bits) Value Ahg474577 jgi|Araly1|474577|fgenesh2_kg.1__4531__AT1G55205.1 453 5e-127 > Ahg474577 jgi|Araly1|474577|fgenesh2_kg.1__4531__AT1G55205.1 Length=574 Score = 453 bits (245), Expect = 5e-127 Identities = 267/278 (96%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 24 CAATGGCGTCTTCTTCTAAAATCTGCAGATTATCATCAAAGATTCATTCTTTAACCCAGA 83 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CAATGGCGTCTTCTTCTAAAATCTGCAGATTATCATCAAAGATTCATTCTTTAACCCAGA 60 Query 84 AGCTCAGCAAGACGAATGTTCACATTTCCTCTTTACCCTCTCCCATTAAATCTTCATCTC 143 |||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 61 AGCTTAGCAAGACGAATGTTCACGCTTCCTCCTTACCCTCTCCCATTAAATCTTCATCTC 120 Query 144 CATCCTCAGCAACTTCCCGTATCAATCAATCTTTTAGATTACCGGTGGAGCTAAGTTGCT 203 ||||||||||||| | |||||||||||||||||||||||||| |||||||||||| ||| Sbjct 121 CATCCTCAGCAACCACTCGTATCAATCAATCTTTTAGATTACCAGTGGAGCTAAGTAGCT 180 Query 204 GTTTATCGATGTTGCCACTACACAGTGCTATAGCATCTGCCAGATTGATATCAAGTTTGT 263 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GTTTATCGATGTTGCCCCTACACAGTGCTATAGCATCTGCCAGATTGATATCAAGTTTGT 240 Query 264 CTGTTGAGTCTAAGAGCTGGGGTTTAGTTCCTCAAGGT 301 ||||||||||||||||||||| |||||||||||||||| Sbjct 241 CTGTTGAGTCTAAGAGCTGGGCTTTAGTTCCTCAAGGT 278 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18581771843 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5