BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT1G55460.1

Length=1547
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg474601 jgi|Araly1|474601|fgenesh2_kg.1__4555__AT1G55460.1        1908    0.0   
  Ahg497310 jgi|Araly1|497310|fgenesh2_kg.185__1__AT1G55460.1         1066    0.0   
  Ahg924054 jgi|Araly1|924054|scaffold_105335.1                        817    0.0   
  Ahg914671 jgi|Araly1|914671|Al_scaffold_0001_4925                    577    1e-163


> Ahg474601 jgi|Araly1|474601|fgenesh2_kg.1__4555__AT1G55460.1
Length=1242

 Score = 1908 bits (1033),  Expect = 0.0
 Identities = 1174/1243 (94%), Gaps = 5/1243 (0%)
 Strand=Plus/Plus

Query  87    TCGATGGGTAAGAACGATTTTCTAACCCCAAAGGCGATTGCGAATCGAATTAAAGCCAAA  146
             ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct  1     TCGATGGGTAAGAACGATTTTCTAACCCCGAAGGCAATTGCGAATCGAATCAAAGCCAAA  60

Query  147   GGACTTCAAAAGCTTCGATGGTATTGTCAGATGTGTCAGAAACAATGCCGAGACGAGAAT  206
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  61    GGACTTCAAAAGCTTCGATGGTATTGTCAGATGTGTCAGAAGCAATGCCGAGACGAGAAT  120

Query  207   GGATTCAAGTGTCATTGTATGAGCGAATCTCACCAGAGGCAGATGCAAGTTTTTGGGCAG  266
             |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct  121   GGATTCAAGTGTCACTGTATGAGCGAATCTCACCAGAGGCAGATGCAAGTCTTTGGTCAG  180

Query  267   AATCCGACTCGTGTTGTCGATGGTTACTCTGAAGAATTCGAGCAGACGTTTCTCGATCTG  326
             ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct  181   AATCCGACTCGTGTTGTTGATGGTTACTCCGAAGAGTTCGAGCAGACGTTTCTCGATCTG  240

Query  327   ATGAGGCGGAGCCACCGTTTCTCTCGTATCGCTGCCACTGTTGTCTACAATGAGTATATT  386
             ||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| 
Sbjct  241   ATGCGGCGGAGCCACCGCTTCTCTCGTATCGCCGCCACTGTTGTTTACAATGAGTATATC  300

Query  387   AACGATAGACATCATGTTCACATGAATTCGACGGAGTGGGCGACGTTGACGGAGTTTATC  446
             |||||||| ||||||||||| |||||||| |||||||||||||| ||||| |||||||||
Sbjct  301   AACGATAGGCATCATGTTCATATGAATTCCACGGAGTGGGCGACTTTGACTGAGTTTATC  360

Query  447   AAGCATCTTGGGAAAACTGGTAAGTGTAAGGTTGAAGAAACTCCTAAAGGTTGGTTTATT  506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361   AAGCATCTTGGGAAAACTGGTAAGTGTAAGGTTGAAGAAACTCCTAAAGGTTGGTTTATT  420

Query  507   ACTTATATAGATAGAGATTCTGAGACTTTGTTTAAGGAGAGGTTGAAGAATAAGAGAGTT  566
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  421   ACTTATATAGATAGAGATTCTGAGACTTTGTTTAAGGAGAGGTTGAAAAATAAGAGAGTT  480

Query  567   AAGAGTGATTTAGCTgaggaggagaagcaagagagggagattcaga-gacagattgagag  625
             |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct  481   AAGAGTGATTTAGCTGAGGAGGAGAAGCAAGAGAGGGAGATTCAGAAG-CAGATTGAGAG  539

Query  626   agctgctgagaAATtgaatggtggtggtggtgaaggtgaaaccagtggtaatgatgaagt  685
             |||||||||||| | ||||| || ||||||||||||||||| ||||||||| || |  ||
Sbjct  540   AGCTGCTGAGAAGTCGAATGCTGTTGGTGGTGAAGGTGAAAGCAGTGGTAAAGAAGCTGT  599

Query  686   tgtggatgatggtgatgatga-GAG--GAAGAAAGATGAAGACTTGAGGTTGAAGAGTGG  742
              | |||||||| ||||||||| | |  ||||||||||||||| |||||||| ||||||||
Sbjct  600   GGAGGATGATGATGATGATGATGTGAAGAAGAAAGATGAAGAATTGAGGTTTAAGAGTGG  659

Query  743   GGTCAAGGTTGGATTTGCTCTTGGTGGAGGTGTTAAACAGGTTGCTACGGGTAAAGAGAG  802
             ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  660   GGTTAAAGTTGGATTTGCTCTTGGTGGAGGTGTTAAACAGGTTGCTACGGGTAAAGAGAG  719

Query  803   AGGGGAAAGCTCGAAACTTTTGTTTGGGGATGAAGAGAATGACAAGGTTgagagagggga  862
             ||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||
Sbjct  720   AGGGGAAAGCTCGAAACTTGTGTTTGGGGATGAAGAGAATGAGAAGGTTGGGAGAGGGGA  779

Query  863   gaagaggaagagaagtggggactccgggaggagcgagaaggagaggagatcagctttgga  922
              |||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||
Sbjct  780   TAAGAGGAAGAGAAGCGGGGAATCCGGGAGGAGCGAGAAGGACAGAAGATCAGCTTTGGA  839

Query  923   tgagttgatgaaggaggaagagaagaagaaggagaggatgaaTCGGAAAGATTACTGGTT  982
             ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  840   TGAGTTGATGAAGGAGGAAGAGAAGAAGAAGGAGAGGATGAATCGGAAAGACTACTGGTT  899

Query  983   GTTCGAAGGGATCATTGTGAAGGTGATGAGTAAGGCTTTGGCAGAGAAAGGGTATTATAA  1042
             |||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  900   GTTCGAGGGGATAATTGTGAAGGTAATGAGTAAGGCTTTGGCAGAGAAAGGGTATTATAA  959

Query  1043  GCAAAAAGGTGTTGTGAAGAAAGTGATTGATAATTATGTTGGGGAGATCAAAATGCTTGA  1102
             |||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct  960   GCAAAAGGGTGTTGTGAAGAAAGTGATTGATAAGTATGTGGGGGAGATCGAAATGCTTGA  1019

Query  1103  TTCTAAACATGTGTTGAGAGTTGATCAAAAGGAGCTAGAGACTGTGCTTCCACAAATTGG  1162
             |||||| |||||| ||||||||||||||  |||||| ||||||||||||||||| || ||
Sbjct  1020  TTCTAAGCATGTGCTGAGAGTTGATCAAGTGGAGCTCGAGACTGTGCTTCCACAGATAGG  1079

Query  1163  AGGGATGGTGAAGATAGTGAATGGGGCATATCGTGGTTCGAATGCAAGGTTGTTGGGTGT  1222
             |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  1080  AGGGATAGTGAAGATAGTGAATGGGGCATATCGTGGTTCGAATGCAAAGTTGTTGGGTGT  1139

Query  1223  GGATACAGAGAAGTTCTGTGCTAAAGTGCAGATCGAGAAAGGTGTCTATGATGGAAGAGT  1282
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct  1140  GGATACAGAGAAGTTCTGTGCTAAAGTGCAAATCGAGAAAGGTGTCTATGATGGAAGAGT  1199

Query  1283  CATCAAGTCCATTGAGTACGAGGACATATGCAAACTTGCTTAG  1325
             |||||||||||||||||||||||||||||||||||||||||||
Sbjct  1200  CATCAAGTCCATTGAGTACGAGGACATATGCAAACTTGCTTAG  1242


> Ahg497310 jgi|Araly1|497310|fgenesh2_kg.185__1__AT1G55460.1
Length=1290

 Score = 1066 bits (577),  Expect = 0.0
 Identities = 694/750 (93%), Gaps = 9/750 (1%)
 Strand=Plus/Plus

Query  589   agaagcaag-agagggagattcagagacagattgagagagctgctgagaAATtgaatggt  647
             |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct  547   AGAA-CAAGAAGAGGGAGATTCAGAAACAGATTGAGAGAGCTGCTGAGAAATTGAATGCT  605

Query  648   ggtggtggtgaaggtgaaaccagtggtaatgatgaagttgtggatg-atggtgatgatga  706
              ||||||||||||||||||  ||||||||  | ||||||||||| | ||  ||||||| |
Sbjct  606   CGTGGTGGTGAAGGTGAAAGTAGTGGTAA--A-GAAGTTGTGGAGGAAT-ATGATGATAA  661

Query  707   GAGGAAGAAAGATGAAGACTTGAGGTTGAAGAGTGGGGTCAAGGTTGGATTTGCTCTTGG  766
             || ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct  662   GAAGAAGAAAGAGGAAGAATTGAGGTTGAAGAGTGGGGTTAAGGTTGGATTTGCTCTTGG  721

Query  767   TGGAGGTGTTAAACAGGTTGCTACGGGTAAAGAGAGAGGGGAAAGCTCGAAACTTTTGTT  826
             ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||
Sbjct  722   TGGAGGTGTTAAACAGGTTACTACGGGTAAAGAGAGAGTGGAAAGCTCGAAACTTGTCTT  781

Query  827   TGGGGATGAAGAGAATGACAAGGTTgagagaggggagaagaggaagagaagtggggactc  886
             ||||| |||||||||||| |||||| ||||||| ||||||||||||||||| ||||||||
Sbjct  782   TGGGGTTGAAGAGAATGAGAAGGTTCAGAGAGGTGAGAAGAGGAAGAGAAGCGGGGACTC  841

Query  887   cgggaggagcgagaaggagaggagatcagctttggatgagttgatgaaggaggaagagaa  946
             |||||||||| ||| ||| |  ||||||||||||||||||||||||||||||||||||||
Sbjct  842   CGGGAGGAGCAAGACGGATAAAAGATCAGCTTTGGATGAGTTGATGAAGGAGGAAGAGAA  901

Query  947   gaagaaggagaggatgaaTCGGAAAGATTACTGGTTGTTCGAAGGGATCATTGTGAAGGT  1006
             ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct  902   GAAGAAGGAGAGGATGAATCGGAAAGATTACTGGTTGTTTGAAGGAATCATTGTGAAGGT  961

Query  1007  GATGAGTAAGGCTTTGGCAGAGAAAGGGTATTATAAGCAAAAAGGTGTTGTGAAGAAAGT  1066
             ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct  962   GATGAGTAAGGCTTTGGCACAGAAAGGGTATTATAAGCAAAAGGGTGTTGTGAAGAAAGT  1021

Query  1067  GATTGATAATTATGTTGGGGAGATCAAAATGCTTGATTCTAAACATGTGTTGAGAGTTGA  1126
             | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  1022  GGTTGATAAGTATGTTGGGGAGATCGAAATGCTTGATTCTAAACATGTGTTGAGAGTTGA  1081

Query  1127  TCAAAAGGAGCTAGAGACTGTGCTTCCACAAATTGGAGGGATGGTGAAGATAGTGAATGG  1186
             |||   ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct  1082  TCAGGTGGAGCTAGAGACTGTGCTTCCACAAATAGGAGGGATAGTGAAGATAGTGAATGG  1141

Query  1187  GGCATATCGTGGTTCGAATGCAAGGTTGTTGGGTGTGGATACAGAGAAGTTCTGTGCTAA  1246
             |||||||||| | ||||||||||||||||||||| |||||||||| |||||||| |||||
Sbjct  1142  GGCATATCGTCGCTCGAATGCAAGGTTGTTGGGTTTGGATACAGAAAAGTTCTGCGCTAA  1201

Query  1247  AGTGCAGATCGAGAAAGGTGTCTATGATGGAAGAGTCATCA-AGTCCATTGAGTACGAGG  1305
             |||||| ||||||||| | |||||||||||||||||||||| | ||||| ||||||||||
Sbjct  1202  AGTGCAAATCGAGAAAAGCGTCTATGATGGAAGAGTCATCAGA-TCCATCGAGTACGAGG  1260

Query  1306  ACATATGCAAACTTGCTTAGTTATATCTTT  1335
             ||||||||||||||||||||||||||||||
Sbjct  1261  ACATATGCAAACTTGCTTAGTTATATCTTT  1290


 Score =  869 bits (470),  Expect = 0.0
 Identities = 529/558 (95%), Gaps = 1/558 (0%)
 Strand=Plus/Plus

Query  8    TCGATCAGTGGTTGTTACCTGAGAAACCCTAGATTTCAATTCCCAACACCTTAATTTTGT  67
            ||||| ||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||
Sbjct  2    TCGATTAGTGGTTGTTACCGGAGAAACCCTAGATTTCAATTCGCAAGACCTTGATTTTGT  61

Query  68   TCGACAAACCCAAGAAGATTCGATGGGTAAGAACGATTTTCTAACCCCAAAGGCGATTGC  127
            || ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct  62   TCTACAAACCCACGAAGAATCGATGGGTAAGAACGATTTTCTAACCCCGAAGGCGATTGC  121

Query  128  GAATCGAATTAAAGCCAAAGGACTTCAAAAGCTTCGATGGTATTGTCAGATGTGTCAGAA  187
            ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  122  GAATCAAATCAAAGCCAAAGGACTTCAAAAGCTTCGATGGTATTGTCAGATGTGTCAGAA  181

Query  188  ACAATGCCGAGACGAGAATGGATTCAAGTGTCATTGTATGAGCGAATCTCACCAGAGGCA  247
             ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  182  GCAATGCCGAGATGAGAATGGATTCAAGTGTCATTGTATGAGCGAATCTCACCAGAGGCA  241

Query  248  GATGCAAGTTTTTGGGCAGAATCCGACTCGTGTTGTCGATGGTTACTCTGAAGAATTCGA  307
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  242  GATGCAAGTTTTTGGGCAGAATCCAACTCGTGTTGTCGATGGTTACTCTGAAGAATTCGA  301

Query  308  GCAGACGTTTCTCGATCTGATGAGGCGGAGCCACCGTTTCTCTCGTATCGCTGCCACTGT  367
            |||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||
Sbjct  302  GCAGACGTTTCTCGATCTGATGCGGCGGAGCCACCGCTTCTCTCGTATCGCCGCCACTGT  361

Query  368  TGTCTACAATGAGTATATTAACGATAGACATCATGTTCACATGAATTCGACGGAGTGGGC  427
            ||| |||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||
Sbjct  362  TGTTTACAATGAGTATATCAACGATAGGCATCATGTTCATATGAATTCCACGGAGTGGGC  421

Query  428  GACGTTGACGGAGTTTATCAAGCATCTTGGGAAAACTGGTAAGTGTAAGGTTGAAGAAAC  487
            ||||||||||||||| |||||| | ||||||||||| |||||||||||||||||||||||
Sbjct  422  GACGTTGACGGAGTTCATCAAGTACCTTGGGAAAACAGGTAAGTGTAAGGTTGAAGAAAC  481

Query  488  TCCTAAAGGTTGGTTTATTACTTATATAGATAGAGATTCTGAGACTTTGTTTAAGGAGAG  547
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  482  TCCTAAAGGTTGGTTTATTACTTATATAGATAGAGATTCGGAGACTTTGTTTAAGGAGAG  541

Query  548  GTTGAAGAATAAGA-GAG  564
            ||||||||| |||| |||
Sbjct  542  GTTGAAGAACAAGAAGAG  559


> Ahg924054 jgi|Araly1|924054|scaffold_105335.1
Length=580

 Score =  817 bits (442),  Expect = 0.0
 Identities = 534/575 (93%), Gaps = 19/575 (3%)
 Strand=Plus/Plus

Query  185  GAAACAATGCCGAGACGAGAATGGATTCAAGTGTCATTGTATGAGCGAATCTCACCAGAG  244
            ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct  1    GAAACAATGCCGAGACGAGAATGGATTCAAGTGT--TTGTATGAGCGAATCTCACCAGAG  58

Query  245  GCAGATGCAAGTTTTTGGGCAGAATCCGACTCGTGTTGTCGATGGTTACTCTGAAGAATT  304
            |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||
Sbjct  59   GCAGATGCAAGTTTTTGGCCAGAATCCGACTCGTGTTGTTGATGGTTACTCTGAAGAGTT  118

Query  305  CGAGCAGACGTTTCTCGATCTGATGAGGCGGAGCCACCGTTTCTCTCGTATCGCTGCCAC  364
            ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||
Sbjct  119  CGAGCAGACGTTTCTCGATCTGATGCGGCGGAGCCACCGCTTCTCTCGTATCGCCGCCAC  178

Query  365  TGTTGTCTACAATGAGTATATTAACGATAGACATCATGTTCACATGAATTCGACGGAGTG  424
            |||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct  179  TGTTGTTTACAATGAGTATATTAACGATAGACATCATGTCCATATGAATTCCACGGAGTG  238

Query  425  GGCGACGTTGACGGAGTTTATCAAGCATCTTGGGAAAACTGGTAAGTGTAAGGTTGAAGA  484
            |||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct  239  GGCGACGTTGACGGAGTTCATAAAGCATCTTGGGAAAACTGGTAAGTGTAAGGTTGAGGA  298

Query  485  AACTCCTAAAGGTTGGTTTATTACTTATATAGATAGAGATTCTGAGACTTTGTTTAAGGA  544
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  299  AACTCCGAAAGGTTGGTTTATTACTTATATAGATAGAGATTCTGAGACTTTGTTTAAGGA  358

Query  545  GAGGTTGAAGAATAAGAGAGTTAAGAGTGATTTAGCTgaggaggagaagcaagagaggga  604
            |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct  359  GAGGTTGAAGAACAAGAGAGTTAAGAGTGATTTAGCTGAGGAGGAGAAACAAGAGAGAGA  418

Query  605  gattcaga-gacagattgagagagctgctgagaAATtgaatggtggtggtggtgaaggtg  663
            |||||||| | ||||||||||||||||||||||| | ||||| |||||||||||||||||
Sbjct  419  GATTCAGAAG-CAGATTGAGAGAGCTGCTGAGAAGTCGAATGCTGGTGGTGGTGAAGGTG  477

Query  664  aaaccagtggtaatgatgaagttgtggatgatggtgatgatgaGAGGAAGAAAGATGAAG  723
            |||| ||||||||  | |||||||   ||||||   | ||  |||  || ||||||||||
Sbjct  478  AAACAAGTGGTAA--A-GAAGTTG---ATGATG---A-GA--AGA--AA-AAAGATGAAG  522

Query  724  ACTTGAGGTTGAAGAGTGGGGTCAAGGTTGGATTT  758
            |||||||||||||||||||||| ||||||||||||
Sbjct  523  ACTTGAGGTTGAAGAGTGGGGTTAAGGTTGGATTT  557


> Ahg914671 jgi|Araly1|914671|Al_scaffold_0001_4925
Length=366

 Score =  577 bits (312),  Expect = 1e-163
 Identities = 348/366 (95%), Gaps = 0/366 (0%)
 Strand=Plus/Plus

Query  960   atgaaTCGGAAAGATTACTGGTTGTTCGAAGGGATCATTGTGAAGGTGATGAGTAAGGCT  1019
             |||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct  1     ATGAATCGGAAAGACTACTGGTTGTTCGAGGGGATAATTGTGAAGGTAATGAGTAAGGCT  60

Query  1020  TTGGCAGAGAAAGGGTATTATAAGCAAAAAGGTGTTGTGAAGAAAGTGATTGATAATTAT  1079
             ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct  61    TTGGCAGAGAAAGGGTATTATAAGCAAAAGGGTGTTGTGAAGAAAGTGATTGATAAGTAT  120

Query  1080  GTTGGGGAGATCAAAATGCTTGATTCTAAACATGTGTTGAGAGTTGATCAAAAGGAGCTA  1139
             || ||||||||| |||||||||||||||| |||||| ||||||||||||||  |||||| 
Sbjct  121   GTGGGGGAGATCGAAATGCTTGATTCTAAGCATGTGCTGAGAGTTGATCAAGTGGAGCTC  180

Query  1140  GAGACTGTGCTTCCACAAATTGGAGGGATGGTGAAGATAGTGAATGGGGCATATCGTGGT  1199
             ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct  181   GAGACTGTGCTTCCACAGATAGGAGGGATAGTGAAGATAGTGAATGGGGCATATCGTGGT  240

Query  1200  TCGAATGCAAGGTTGTTGGGTGTGGATACAGAGAAGTTCTGTGCTAAAGTGCAGATCGAG  1259
             |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  241   TCGAATGCAAAGTTGTTGGGTGTGGATACAGAGAAGTTCTGTGCTAAAGTGCAAATCGAG  300

Query  1260  AAAGGTGTCTATGATGGAAGAGTCATCAAGTCCATTGAGTACGAGGACATATGCAAACTT  1319
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301   AAAGGTGTCTATGATGGAAGAGTCATCAAGTCCATTGAGTACGAGGACATATGCAAACTT  360

Query  1320  GCTTAG  1325
             ||||||
Sbjct  361   GCTTAG  366



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 57935262645


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5